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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP026514 Arthrobacter sp. PGP41 chromosome, complete genome 1 crisprs cas3,DinG,csa3,WYL,DEDDh 0 1 0 0

Results visualization

1. CP026514
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP026514_1 1490177-1490274 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP026514_2 2.1|3603852|31|CP026514|CRISPRCasFinder 3603852-3603882 31 NC_007974 Cupriavidus metallidurans CH34 megaplasmid, complete sequence 1225805-1225835 6 0.806
CP026514_2 2.1|3603852|31|CP026514|CRISPRCasFinder 3603852-3603882 31 NZ_CP046333 Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3 11360-11390 6 0.806
CP026514_2 2.1|3603852|31|CP026514|CRISPRCasFinder 3603852-3603882 31 NC_012586 Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence 512801-512831 7 0.774

1. spacer 2.1|3603852|31|CP026514|CRISPRCasFinder matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 6, identity: 0.806

----gtcgccggggaggcagttcgcggatatcgct	CRISPR spacer
gcgtatcgc----gaggcagttcgcggacatcgct	Protospacer
    .****    ***************.******

2. spacer 2.1|3603852|31|CP026514|CRISPRCasFinder matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 6, identity: 0.806

----gtcgccggggaggcagttcgcggatatcgct	CRISPR spacer
gcgtatcgc----gaggcagttcgcggacatcgct	Protospacer
    .****    ***************.******

3. spacer 2.1|3603852|31|CP026514|CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 7, identity: 0.774

gtcgccgggga-ggcagttcgcggatatcgct	CRISPR spacer
-ctgccgggggcggcagttcgccgatatcggc	Protospacer
 ..*******. ********** ******* .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage