CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP019305	Lactobacillus rhamnosus strain SCT-10-10-60 chromosome, complete genome	1 crisprs	NA	0	0	0	0

Cas Category Instructions

Results visualization

1. CP019305

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CRISPR-Cas detection and classification

Crispr_ID: CP019305_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019305_1

970164-970309

Orphan

Consensus_repeat	Method
GCGTGATGGCCGGTCTTTGGCCATTGCGCCCAAGGTCCTTACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP019305_1

>merge|CP019305|1|970164-970309|CRISPRCasFinder
GCGTGATGGCCGGTCTTTGGCCATTGCGCCCAAGGTCCTTACACGCAGACTTCTGCGCTGGGGAGCGCGTTATGGGCGTAAACCAGAATATAAGCGGCCTTAAGCGTGATGACCGGTCTTTGGCCATTGCGCCCAAGGTCCTTACA

>CP019305|1|1|970164-970309|CRISPRCasFinder
GCGTGATGGCCGGTCTTTGGCCATTGCGCCCAAGGTCCTTACA	CGCAGACTTCTGCGCTGGGGAGCGCGTTATGGGCGTAAACCAGAATATAAGCGGCCTTAA
GCGTGATGACCGGTCTTTGGCCATTGCGCCCAAGGTCCTTACA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage