CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP027141	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 plasmid unnamed4	0 crisprs	NA	0
CP027143	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 plasmid unnamed3	0 crisprs	NA	1
CP027142	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 chromosome, complete genome	1 crisprs	csa3,cas3,DEDDh,RT,DinG,cas14j,WYL,TnsE_C	10
CP027145	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 plasmid unnamed2, complete sequence	0 crisprs	csa3	2
CP027144	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 plasmid unnamed1, complete sequence	0 crisprs	csa3,PD-DExK	2

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

32256 : 39582

Enterobacteria_phage(37.5%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVJ83249.1\|32256_32766_-	resolvase, N terminal domain protein	M4QQC6	Vibrio_phage	1.0e-14	39.6
AVJ83250.1\|32965_33511_-	plasmid pRiA4b ORF-3-like family protein	NA	NA	NA	NA
AVJ83234.1\|33640_33766_+\|transposase	transposase domain protein	NA	NA	NA	NA
AVJ83240.1\|34011_34605_+	resolvase, N terminal domain protein	A0A0A7NPV4	Enterobacteria_phage	1.4e-31	47.2
AVJ83207.1\|34923_35166_-	pentapeptide repeats family protein	NA	NA	NA	NA
AVJ83229.1\|35406_35529_+	hypothetical protein	NA	NA	NA	NA
AVJ83238.1\|35974_36139_+\|transposase	transposase family protein	Q76S41	Shigella_phage	4.6e-14	72.2
AVJ83246.1\|36178_36343_+\|transposase	putative iS2 transposase	Q76S41	Shigella_phage	3.4e-17	83.3
AVJ83204.1\|36659_37364_-\|transposase	transposase IS66 family protein	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVJ83256.1\|37340_37463_+\|transposase	putative tn3 transposase DDE domain protein	NA	NA	NA	NA
AVJ83216.1\|37498_37927_+\|transposase	tn3 transposase DDE domain protein	Q1MVP5	Enterobacteria_phage	3.4e-56	77.0
AVJ83243.1\|37936_38302_-	putative fipA	NA	NA	NA	NA
AVJ83214.1\|38308_38695_-	single-stranded DNA-binding family protein	A0A0A0P1Q9	Enterobacteria_phage	1.5e-58	88.3
AVJ83232.1\|39087_39582_-	transglycosylase SLT domain protein	A0A1P8CWQ1	Bacillus_phage	2.6e-23	54.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP027142

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CRISPR-Cas detection and classification

Crispr_ID: CP027142_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027142_1

653917-654030

Orphan

Consensus_repeat	Method
GCCGGGTAAACGCAGTGTCACCCGGCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027142_1

>merge|CP027142|1|653917-654030|CRISPRCasFinder
GCCGGGTAAACGCAGTGTCACCCGGCAAAAAGCCCGGTGGCGCTAACGCTTACCGGGCCTACGAAGAGCCAACATGTACAAAGTAGGCCGGGTAAACGCAGTGCCACCCGGCAA

>CP027142|1|1|653917-654030|CRISPRCasFinder
GCCGGGTAAACGCAGTGTCACCCGGCAA	AAAGCCCGGTGGCGCTAACGCTTACCGGGCCTACGAAGAGCCAACATGTACAAAGTAG
GCCGGGTAAACGCAGTGCCACCCGGCAA

Protein	Signature genes	Signature genes Name	Protein_function
CP027142.1\|AVJ79140.1\|643152_645855_+\|chitinase-A-domain-protein	unknown	unknown	gnl\|CDD\|119365
CP027142.1\|AVJ79149.1\|656828_657728_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225287
CP027142.1\|AVJ79154.1\|662774_664715_+\|macrolide-export-ATP-binding/permease-protein-MacB	unknown	unknown	gnl\|CDD\|182528
CP027142.1\|AVJ79150.1\|657904_658600_-\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
CP027142.1\|AVJ79137.1\|641619_642105_+\|type-II-secretion-system-(T2SS),-M-family-protein	unknown	unknown	gnl\|CDD\|377391
CP027142.1\|AVJ79146.1\|652095_653814_-\|pyruvate-dehydrogenase	unknown	unknown	gnl\|CDD\|181661
CP027142.1\|AVJ79151.1\|658891_660550_+\|P-loop-containing-region-of-AAA-domain-protein	unknown	unknown	gnl\|CDD\|226121
CP027142.1\|AVJ79156.1\|665274_665595_+\|ATP-dependent-Clp-protease-adaptor-ClpS-family-protein	unknown	unknown	gnl\|CDD\|178809
CP027142.1\|AVJ79145.1\|651056_652058_-\|low-specificity-L-threonine-aldolase	unknown	unknown	gnl\|CDD\|236710
CP027142.1\|AVJ79147.1\|654052_655021_-\|NADH-oxidoreductase-hcr	unknown	unknown	gnl\|CDD\|236735
CP027142.1\|AVJ79155.1\|664785_665007_-\|cold-shock-domain-protein-CspD	unknown	unknown	gnl\|CDD\|184960
CP027142.1\|AVJ79153.1\|661662_662778_+\|macrolide-specific-efflux-protein-MacA	unknown	unknown	gnl\|CDD\|183211
CP027142.1\|AVJ79148.1\|655031_656684_-\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
CP027142.1\|AVJ79139.1\|643015_643150_+\|hypothetical-protein	unknown	unknown	unknown
CP027142.1\|AVJ79152.1\|660546_661503_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377343
CP027142.1\|AVJ79141.1\|645957_646398_+\|transglycosylase-SLT-domain-protein	unknown	unknown	gnl\|CDD\|185228
CP027142.1\|AVJ79142.1\|646532_648359_+\|PKD-domain-protein	unknown	unknown	gnl\|CDD\|381595
CP027142.1\|AVJ79144.1\|649609_651046_-\|3-beta-hydroxysteroid-dehydrogenase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|187556
CP027142.1\|AVJ79143.1\|648503_649517_-\|3-beta-hydroxysteroid-dehydrogenase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|223528
CP027142.1\|AVJ79138.1\|642101_642899_+\|bacterial-Peptidase-A24-N-terminal-domain-protein	unknown	unknown	gnl\|CDD\|224900

Protein	Function_ID	Function_description	E-value
CP027142.1\|AVJ79140.1\|643152_645855_+\|chitinase-A-domain-protein	gnl\|CDD\|119365	cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.	6.26813e-123
CP027142.1\|AVJ79149.1\|656828_657728_-\|hypothetical-protein	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	1.56998e-115
CP027142.1\|AVJ79154.1\|662774_664715_+\|macrolide-export-ATP-binding/permease-protein-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
CP027142.1\|AVJ79150.1\|657904_658600_-\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	1.82782e-146
CP027142.1\|AVJ79137.1\|641619_642105_+\|type-II-secretion-system-(T2SS),-M-family-protein	gnl\|CDD\|377391	pfam04612, T2SSM, Type II secretion system (T2SS), protein M. This family of membrane proteins consists of Type II secretion system protein M sequences from several Gram-negative (diderm) bacteria. The precise function of these proteins is unknown, though in Vibrio cholerae, the T2SM (EpsM) protein interacts with the T2SL (EpsL) protein, and also forms homodimers.	2.12976e-27
CP027142.1\|AVJ79146.1\|652095_653814_-\|pyruvate-dehydrogenase	gnl\|CDD\|181661	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase.	0
CP027142.1\|AVJ79151.1\|658891_660550_+\|P-loop-containing-region-of-AAA-domain-protein	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
CP027142.1\|AVJ79156.1\|665274_665595_+\|ATP-dependent-Clp-protease-adaptor-ClpS-family-protein	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	9.90991e-48
CP027142.1\|AVJ79145.1\|651056_652058_-\|low-specificity-L-threonine-aldolase	gnl\|CDD\|236710	PRK10534, PRK10534, L-threonine aldolase; Provisional.	0
CP027142.1\|AVJ79147.1\|654052_655021_-\|NADH-oxidoreductase-hcr	gnl\|CDD\|236735	PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional.	0
CP027142.1\|AVJ79155.1\|664785_665007_-\|cold-shock-domain-protein-CspD	gnl\|CDD\|184960	PRK14998, PRK14998, cold shock-like protein CspD; Provisional.	1.04122e-47
CP027142.1\|AVJ79153.1\|661662_662778_+\|macrolide-specific-efflux-protein-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
CP027142.1\|AVJ79144.1\|649609_651046_-\|3-beta-hydroxysteroid-dehydrogenase/isomerase-family-protein	gnl\|CDD\|187556	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2. This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.4315e-140
CP027142.1\|AVJ79152.1\|660546_661503_-\|hypothetical-protein	gnl\|CDD\|377343	pfam04393, DUF535, Protein of unknown function (DUF535). Family member Shigella flexneri VirK is a virulence protein required for the expression, or correct membrane localization of IcsA (VirG) on the bacterial cell surface,. This family also includes Pasteurella haemolytica lapB, which is thought to be membrane-associated.	3.00792e-124
CP027142.1\|AVJ79141.1\|645957_646398_+\|transglycosylase-SLT-domain-protein	gnl\|CDD\|185228	PRK15328, PRK15328, type III secretion system invasion protein IagB.	1.24199e-87
CP027142.1\|AVJ79142.1\|646532_648359_+\|PKD-domain-protein	gnl\|CDD\|381595	cd00325, chitinase_GH19, Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence.	3.85045e-72
CP027142.1\|AVJ79148.1\|655031_656684_-\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
CP027142.1\|AVJ79143.1\|648503_649517_-\|3-beta-hydroxysteroid-dehydrogenase/isomerase-family-protein	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	5.3954e-52
CP027142.1\|AVJ79138.1\|642101_642899_+\|bacterial-Peptidase-A24-N-terminal-domain-protein	gnl\|CDD\|224900	COG1989, PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	3.88313e-41

>CP027142.1|AVJ79146.1|652095_653814_-|pyruvate-dehydrogenase
MKQTVAAYIAKTLEQAGVKRIWGVTGDSLNGLSDSLNKMKTIEWMPTRHEEVAAFAAGAEAQLTGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAILNRGVSVVVLPGDVALKAAPETATTHWYSAPQPTITPADEELKKLAQLLRYSSNIALMCGSGCAGAHKELVEFAAKLKAPVVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLILLGTQFPYRAFYPTDAKIIQIDINPGSIGAHSKVDMALIGDIKSTLAALLPLLEEKTDRKFLDKALSDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFADDDAIFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQALGAKATAPERQVVAMCGDGGFSMLMGDFLSVAQMKLPLKIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASEVDEALQRAFAIDGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELAKTNWLR
>CP027142.1|AVJ79145.1|651056_652058_-|low-specificity-L-threonine-aldolase
MIDLRSDTVTRPGRAMLEEMMAAPVGDDVYGDDPTVNELQRYAAELSGKEAALFLPTGTQANLVALLSHCERGEEYIVGQGAHNYLYEAGGAAVLGSIQPQPIDAAPDGTLPLDKVAAKIKADDIHFARTKLLSLENTHNGKVLPREYLKAAWDFTRERKLGLHVDGARIFNAVVEYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGSADYIRRANRWRKMTGGGMRQAGILAAAGLYALKNNVSRLKDDHDNAAWMAAQLREIGADVMRHDTNMLFVRVGNEHAAALGEFMKARGVLINASPVVRLVMHLDVNREQLTEVVKHWQAFLQR
>CP027142.1|AVJ79144.1|649609_651046_-|3-beta-hydroxysteroid-dehydrogenase/isomerase-family-protein
MPQRILVLGASGYIGQHLTTALSQQGHQVLAVARNTERLQKLHLPGVTCHNVDLNWPKALPALLEGVDTLYYLVHSMGEGGDFIAHERQVAMNVRDTLLQTPVKQVIFLSSLQAPENEQSDHLRARQLTAETLRSARIPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPAAAHRVLEAAGPEVLSYQAQFEHFMRVSGRRRWLVPVPFPTRWISVWFLNVITSVPPTTAKALIQGLKHDLLADDRELRALIPQELIPFDDAVRNTLKEEEKLVNSSDWGYDAQAFARWRPEYGYYPKQAGCTVKTTASLSALWDVVNQIGGKERYFFGNILWQTRGTLDLLVGHRLAKGRPAAPYLNVGDTVDSWKVIIVEPEKQLALLFGMKAPGLGRLCFTLKDKGDHRELDVRAWWHPHGMPGLFYWLLMIPAHLFIFRGMAKRIAQLAEEKRESN
>CP027142.1|AVJ79143.1|648503_649517_-|3-beta-hydroxysteroid-dehydrogenase/isomerase-family-protein
MKVLVTGATSGLGRNAVEFLRNKGISVRATGRNEAMGKLLQKMGAEFVHADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQEAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDIQEDFRPARFACEFARSKAAGEEVIDLLAQSNPHTRFTVLRPQSLFGPHDKVFIPRLAQMMHHYGSVLLPRGGDALVDMTYYENAVHAMWLASQPECDKLVSGRAYNITNGEPCTLRSIVQRLIDELKIDCRIRSVPYPMLDMIARSMERFGSKSAKEPALTHYGVSKLNFDFTLDISRAENEMGYKPIISLDEGIVRTAAWLRDHGKLHR
>CP027142.1|AVJ79142.1|646532_648359_+|PKD-domain-protein
MNKRTLLSVLVAGACVAPFMAQAASLQATTGEPYTMKASDLAKKEHELTNFPLMASVKETIQTLDNAQVELIEPGRAANPDNVKRVEGIVKASDWEYLFPLRAQAYTYSNFLKAVGKFPALCKTYNDGRDSDAICRKELATMFAHFAQETGGHESWRPEAEWRQALVHVREMGWSEGQKGGYNGECNPDVWQGQTWPCGKDKDGDFLSYFGRGAKQLSYNYNYGPFSEAMYGDVRTLLDKPELVADTWLNLASAIFFFAYPQPPKPSMLQVIDGTWQPNDHDKANGLVPGFGVTTQIINGGVECGGPTEIAQSQNRIKYYKEFANYLKVPVPANEVLGCANMKQFDEGGAGALKIYWEQDWGWSADTPDGKTYSCQLVGYQTPFSAFKEGDYSKCVQKFYNVNIVNDDGSSVTPDETPVTPTPTPSEDVTPAPTPAPVPDETPVEPVAVNHAPVAQIAGPIGAVEAGAQVSLSAEGSTDADGNKLTYTWRSQDGQTVTGEDKAVVTFKAPESATAQQYEVSLTVSDGELSSTTSYLLNVKAKATTPSGEDTSYPAWSANSKYNAGDIVNNHGKLFQCKPFPYSGWCNSAPTYYEPGAGLAWAEAWTAL
>CP027142.1|AVJ79141.1|645957_646398_+|transglycosylase-SLT-domain-protein
MKKLILLLLIISQGALANCWDKAARYYHVDPYLLYAIANVESGMNPYAVGKNRDGTRDVGLMQINSSHFTALESRGIDEYRLMTEPCTSIMVGASILSGMIRVYGYNWEAVGAYNAGLKKENYPQRMKYAHKVWAKYQQLKLAARD
>CP027142.1|AVJ79140.1|643152_645855_+|chitinase-A-domain-protein
MKFMKPKYLALFIAAATSSAFAAAPGTPSITSGNDKFALVEVDQAAQDYNNLIKVHKEGVDVKVEWNVWSGDAPTSAKVLLDGKTVWTGAGSAAGSATFKVKKGGRYQEQVELCNDSGCTKSASKLIIVADTDGSHLLPLNTPLLENNKAFAQHTDKVVGAYFPEWGVYDRNFSADKIPVANINHLLYGFIPICGGDGINDSAKSSGALESLKRACAGRQDYTVAIHDPWAALQKPQKGVSNWDDPYKGNYGQLMAMKKAHPDLKILPSIGGWTLSDPFYQMDNKVLRDRFVASVKDFLTTWKVFDGVDIDWEFPGGGGENAKLGNPQTDKATYTALMHDLRQMLNELSAETGRTYELTTAIGAGKDKIEDVDYNTTQQYLDHIFLMSYDFYGAWSNTDLGHQTALYGASWKPDTNYTTDNAVKAMLEQGVKPGKIVVGAGMYGRGWTGVHGYTGDNPFTGTATGPIKGTWESGIVDYRQIVNQMLGKPGWEYKYDEAAEAPYVFNKSTGELVTYDNARSVMAKGKYVLNKNLGGLFAWSIESDNGDILNAMNESLLGGSSIPDLPVETNHAPVASAADQNVTGPATVTLDGSASSDQDDDALTYKWTQVSGPSVTIANSTKAKASFSVPAVTSDQNLVFRLTVTDAKGLSNAVDVQVVNKAPKANQAPVINAMEAVTVQSGEAISLHAQASDPDGDALTYSWSVPADMNATGTDSANVRITAPEVHNTSSYTLSVIVTDGKTSVQSDVQVTVEPKPADEVTPPADDVTPPADDVTPPADDVTPPADDTAGSCDAPVDANASKYAAWDASKIYNNGDTVSFDHLVWKAKYWTQGNQPGFGMDAWELVSNVKMNWRSDLVYNSGDTTTYEGNVYRAKWWTRGDNPANSDVWVKEGASTDCK
>CP027142.1|AVJ79139.1|643015_643150_+|hypothetical-protein
MEEYSAATIFCSRHSRWLNTHYAKRIHDLTEGMGYYVINKFIRK
>CP027142.1|AVJ79138.1|642101_642899_+|bacterial-Peptidase-A24-N-terminal-domain-protein
MNTFTLMREACPLGFPMMSAILGGIMGSFLGVVAERVPGMVMDEEGSGNLLFPASHCPVCQHTLAAWENIPLLSWLLLRGRCHQCGSAIPLRLFLVELFSALFFGITAWCMPDVQALFSLWLLAAFLLPLAMIDWQHQLLPDCLTQPLLWAGLVLHAIDHTLPLRDALFGAVAGYLSLWLLYWAFRLIAGREGLGYGDFKLLAALGAWCGWQALPSIELAAALSGIVGYFAVNNLNKNNLTISFGPYLAFSVIVVFISQQFAFIF
>CP027142.1|AVJ79137.1|641619_642105_+|type-II-secretion-system-(T2SS),-M-family-protein
MKERIAQLKSRYQNYSAREKIILKICAVAIVAAAVYYTGVIPLDNMIQNSKSTLKRQKETLNWMRSEIDKNHLQVQLVKTNNPRTVVENSAHEINLSLTDVRQEGQTLSFVVNRVNVYELKSWLREINQTSGVTLQKINLTPVDHLSDVKAQVQLTWSKSA
>CP027142.1|AVJ79147.1|654052_655021_-|NADH-oxidoreductase-hcr
MTMPTSQCPWRMQVHHIQQETPDVWTLSLLCHDYYPYRAGQYALVSVRNSADTLRAYTISSTPGVSEYITLTVRRIDDGAGSRWLTRDVKRGDYIWLSDAQGEFTCDDKKEDKFLLLAAGCGVTPIMSMRRWLAKYRPQADVQVIFSVRSPEDVIFAEEWRNYPVTLVAEHNATHGFVAGRLSREMLQSVPDIADRTVMTCGPAPYMEIVEKEVNALGVTRFFKEQFFTPVAAAATSGMKFTKLQPAQTFFGRVGTTLLEALESNNVPVAAACRAGVCGCCKTKVVSGEYTVTSTMTLTDAEIAEGYVLACSCHPQGDLVLA
>CP027142.1|AVJ79148.1|655031_656684_-|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAFKAREYGLVDHYVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLNADASARVDNPMAELQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPSDMNALLECSMEIGQMNFKVMSILDAGETSTYGHPTPTQVNVKATEGKCILISGHDLKDLYNLLKQTEGTGVNVYTHGEMLPAHGYPELRKFKHLIGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVSHLEGDDFGPVIAQAQQMAGFPYSEIPHLITVGFGRETLLGAADSLIDLVSREKLRHIFLIGGCDGARGERNYFTDFATRVPEDCLILTLACGKYRFNKLDFGNIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVTNIVTGPTAPGFLTPDLLAILNEKFGLRSVTNVEDDMKQLLSA
>CP027142.1|AVJ79149.1|656828_657728_-|hypothetical-protein
MFSGLLIILLPLIVGYLIPLRHESALKLINRFLSWIVYVILFFMGISLAFLDNLATNLLSILHYSAVTVVVILLCNIAALFWLERTIPWKNHHHQEKLPSRIAMALESLKLCGVVVLGFLLGLTGWAFLQHATEAREYTLIFLLFLIGIQLRNNGMTLKQIVLNRRGMMVAVIVVASSMAGGVINAFILDLPLKTSLAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLVGRSRSTALGLCGATSMDFTLPVLQRSGGLEMVPAAIVHGFILSLLVPILMAFFSA
>CP027142.1|AVJ79150.1|657904_658600_-|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAAFPELGIGFVGVALAFGLTVLTMAFAVGHISGGHFNPAVTLGLWAGGRFPAKDIIGYIIAQVIGGIIAAAVLYVIASGKAGFDAAASGFASNGFGEHSPGGYSMLSAIVIEIVLTAGFLLVIHGATDKYAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWLFWVMPIIGGILGGVLYRTLLEKRD
>CP027142.1|AVJ79151.1|658891_660550_+|P-loop-containing-region-of-AAA-domain-protein
MLLERVEIVGFRGINRLSLQLEQNNVLIGENAWGKSSLLDALTLLLSPEENLYHFVHDDFWFPPGDVNGREKHLHIILTFRESEPGRHRVRRFRPMSPCWVPCEDGFQRIFYRLEGEMAQNDGVLTLREFLDEKGNPIPLDNIDELARHLIRLSPVLRLRDARFMRRIRNGTVPNMPEVEVTARELDFLARELVSRPQNLTDGQIRQGLSAMVQLLEHYFSEQGTGQARHRLMRRRSHDEQRSWRYLDIINRMIDRPSGRTHRVILLGLFSTLLQAKGTVRLDRDARPLLLVEDPETRLHPIMLSVAWHLLNLLPLQRVTTTNSGELLSLTPVEYVCRLVRESSRVTAYRLGPGGLNAEDGRRIAFHIRFNRASSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLIKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREEEREHLTTLPAMDMEHFMYRQGFDDVFHRVAMIPVDVPMNMRRVIAKAIHRSSKPDLAIEVATEAGRRGVESVPTLLRKMFSRVLWLARGRAD
>CP027142.1|AVJ79152.1|660546_661503_-|hypothetical-protein
MSSIVDTPYSTLSQPKSGWQLFKSLASGSLTPGLAWQNPAYRRKFMLRSLATPFTTARLLGNLAKQPRLMQILRVQPGLPCRLHRPWLTVNMGRQNTLDALDNHYQMMSRHLPASLLNGYLSSQGITLVTLTGKEEQQFSVRLSADAFLDKEGEATLTFCDHQNTVLAELTFTLCKYQGKSTLFIGGMQGAKAHVPHEHIQLATKACHGLFPKRLLVEAVMTLAGAFPVEQILAVSNATHIYRSWRYRKKKEGKLLADYDSFWRSLGGQQQENGNFALPLTMPRKPMEEIASKKRSEYRRRYILLDSLHQQVSQATAR
>CP027142.1|AVJ79153.1|661662_662778_+|macrolide-specific-efflux-protein-MacA
MNLKGKRRKLFLLLAVVVLAGGFWLWKVLNAPVPQYQTLIVRPGELQQNVLATGKLDALRKVDVGAQVSGQLKTLSVEIGDKVKKGQLLGVIDPEQAQNQIREVEATLMELRAQRAQAQAERNLAQVTLSRQQALAKTQAISKQDLDTAATELAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTQIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPQTRYEGMLKDILPTPEKVNDAIFYYARFEVPNPQGVLRLDMTAQVHIQLTGVKNVLTVPLSALGESAGDNRYKVKVLRNGETREREVVIGARNDTDVVVVKGLEEGEEVVTSESLPGAAQ
>CP027142.1|AVJ79154.1|662774_664715_+|macrolide-export-ATP-binding/permease-protein-MacB
MTALLELNDIRRSYPSGDGPVEVLKGISLRVEAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGTDVSTLDGDALAKLRREHFGFIFQRYHLLSHLSAAQNVEVPAVYAGVERKKRLERAKALLTRLGLAERVDYQPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDQGHTVIIVTHDPQVAAQAERIIEIHDGELVSNPPPRQSRAAAAKEALPAATGWGQFSSGFREALTMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQLVLADIRAIGTNTIDVYPGKDFGDDEPQYQQALKYDDLAAIQKQPWVNSATPAVSQNLRLRYGNIDVAASANGVSGDYFNVYGMTFSEGATFNAEQLAGRAQVVVLDANSRRQLFPNKTNVVGEVILVGNMPATVIGVAEEKQSMFGSSKILRVWLPYTTISGRIMGQSWLNSITVRVKEGYDSGLAEQQLERLLTLRHGKKDFFTWNMDGLLKTAEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGAMGIALSMMIAFALQLFLPGWEIGFSPMAILTAFLCSTFTGILFGWLPARNAARLDPVDALARE
>CP027142.1|AVJ79155.1|664785_665007_-|cold-shock-domain-protein-CspD
MEMGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASLIVPVEAEAVA
>CP027142.1|AVJ79156.1|665274_665595_+|ATP-dependent-Clp-protease-adaptor-ClpS-family-protein
MGKTNDWLDFDQLAEDKVRDALKPPSMYKVMLMNDDYTPMEFVIDVLQKFFSYDVERATQLMLTVHYRGKAICGIFTAEVAETKVAMVNDYARENEHPLLCTLEKA

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3 : 62951

Enterobacteria_phage(20.59%)

lysis,integrase,tail,head,coat,terminase

attL 9585:9599|attR 55439:55453

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVJ78470.1\|3_1056_-	outer membrane pore protein E	Q1MVN1	Enterobacteria_phage	6.5e-117	59.8
AVJ78471.1\|1361_2465_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.0e-59	39.9
AVJ78472.1\|2476_3730_+	gamma-glutamyl phosphate reductase	A0A1X9I5D4	Streptococcus_phage	1.5e-96	46.4
AVJ78473.1\|3931_5092_-\|integrase	phage integrase family protein	K7P7R5	Enterobacteria_phage	1.0e-211	92.0
AVJ78474.1\|5421_5748_-	hypothetical protein	K7PGV7	Enterobacterial_phage	1.9e-43	80.0
AVJ78475.1\|5757_5997_-	hypothetical protein	M1FPC8	Enterobacteria_phage	4.4e-29	76.9
AVJ78476.1\|5974_6598_-	hypothetical protein	R9VWB9	Serratia_phage	3.4e-49	47.8
AVJ78477.1\|6919_7111_-	hypothetical protein	A0A0P0ZC60	Stx2-converting_phage	3.2e-14	67.8
AVJ78478.1\|7107_7404_-	hypothetical protein	A0A0U2SAZ1	Escherichia_phage	2.4e-29	64.5
AVJ78479.1\|7403_7619_-	hypothetical protein	NA	NA	NA	NA
AVJ78480.1\|7615_8275_-	MT-A70 family protein	G8C7S6	Escherichia_phage	3.2e-122	94.1
AVJ78481.1\|8271_8712_-	methyltransferase domain protein	H9C170	Pectobacterium_phage	5.9e-64	76.6
AVJ78482.1\|9252_9381_-	putative exonuclease	C6ZR35	Salmonella_phage	4.3e-15	88.1
9585:9599	attL	NA	NA	NA	NA
AVJ78483.1\|9809_10352_-	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	9.6e-56	90.5
AVJ78484.1\|10352_11078_-	rad52/22 double-strand break repair family protein	B8K1D9	Salmonella_phage	7.7e-85	64.5
AVJ78485.1\|11074_11233_-	hypothetical protein	I6R9C0	Salmonella_phage	2.6e-06	56.5
AVJ78486.1\|11229_11358_-	putative thioredoxin reductase	NA	NA	NA	NA
AVJ78487.1\|11435_12407_-	hypothetical protein	M9P0E1	Enterobacteria_phage	8.0e-45	61.8
AVJ78488.1\|12476_12617_-	bacteriophage lambda Kil family protein	NA	NA	NA	NA
AVJ78489.1\|12613_12772_-	hypothetical protein	G8C7T3	Escherichia_phage	2.7e-19	94.1
AVJ78490.1\|12768_12963_-	hypothetical protein	B5WZV1	Pseudomonas_phage	6.1e-05	50.9
AVJ78491.1\|13153_13282_-	hypothetical protein	NA	NA	NA	NA
AVJ78492.1\|13395_13938_-	HNH endonuclease family protein	A0A0N9RV98	Escherichia_phage	1.4e-30	44.4
AVJ78493.1\|14148_14274_-	hypothetical protein	NA	NA	NA	NA
AVJ78494.1\|14272_14470_+	hypothetical protein	G8C7T7	Escherichia_phage	2.4e-25	96.9
AVJ78495.1\|14496_14826_-	hypothetical protein	NA	NA	NA	NA
AVJ78496.1\|15243_15954_-	repressor protein CI	K7P7K3	Enterobacteria_phage	1.1e-91	70.6
AVJ78497.1\|16057_16246_+	regulatory protein cro	A0A2R2Z333	Escherichia_phage	1.5e-08	51.8
AVJ78498.1\|16332_16617_+	transcriptional activator protein C1	Q5G8T2	Enterobacteria_phage	1.6e-22	62.8
AVJ78499.1\|16797_17877_+	phage replication protein O, N-terminal domain	E5AGE9	Erwinia_phage	2.1e-86	46.8
AVJ78500.1\|17873_19247_+	dnaB-like helicase N terminal domain protein	E5AGF0	Erwinia_phage	3.8e-165	62.4
AVJ78501.1\|19251_19551_+	putative protein ren	M1FPD5	Enterobacteria_phage	4.8e-17	52.6
AVJ78502.1\|19547_19976_+	hypothetical protein	G8C7U8	Escherichia_phage	5.3e-25	61.9
AVJ78503.1\|19972_20233_+	putative orf-90	T1S9K2	Salmonella_phage	3.4e-35	89.3
AVJ78504.1\|20229_20778_+	hypothetical protein	A0A193GYX5	Enterobacter_phage	4.1e-06	51.5
AVJ78505.1\|20854_21784_+	hypothetical protein	S4TSR6	Salmonella_phage	2.7e-34	77.9
AVJ78506.1\|22297_22747_+	ninB family protein	I6R9D0	Salmonella_phage	1.9e-33	47.2
AVJ78507.1\|22709_22910_+	putative NinE-like protein from lambdoid prophage DLP12	G8C7V4	Escherichia_phage	4.8e-21	87.5
AVJ78508.1\|22902_23514_+	bacteriophage Lambda NinG family protein	A0A0M4RU10	Salmonella_phage	3.4e-41	69.0
AVJ78509.1\|23510_23690_+	hypothetical protein	NA	NA	NA	NA
AVJ78510.1\|23686_23803_+	hypothetical protein	NA	NA	NA	NA
AVJ78511.1\|23799_24483_+	phage antitermination Q family protein	I6PDF8	Cronobacter_phage	2.3e-54	50.4
AVJ78512.1\|24482_24959_+	HNH endonuclease family protein	A0A1I9SEX5	Klebsiella_phage	6.7e-37	51.9
AVJ78513.1\|25065_25392_+	hypothetical protein	NA	NA	NA	NA
AVJ78514.1\|25735_25891_+\|lysis	lysis S family protein	M9NZI9	Enterobacteria_phage	3.7e-21	98.0
AVJ78515.1\|25868_26363_+	lysozyme RrrD	M9P0E5	Enterobacteria_phage	3.6e-86	94.5
AVJ78516.1\|26434_26662_+	hypothetical protein	A0A289ZTW9	Serratia_phage	7.9e-12	56.0
AVJ78517.1\|26658_27036_+	hypothetical protein	M9NYX9	Enterobacteria_phage	3.7e-14	61.0
AVJ78518.1\|27332_27857_+	phage regulatory, Rha family protein	Q38450	Enterobacteria_phage	4.6e-71	77.6
AVJ78519.1\|28012_28219_+	hypothetical protein	NA	NA	NA	NA
AVJ78520.1\|28222_28873_+	putative dNA repair protein RecN	G8C7P2	Escherichia_phage	1.9e-111	97.2
AVJ78521.1\|29013_30438_+\|terminase	terminase-like family protein	G8C7P3	Escherichia_phage	3.9e-274	91.6
AVJ78522.1\|30449_31898_+	hypothetical protein	F1C5D7	Cronobacter_phage	4.3e-119	50.8
AVJ78523.1\|31929_32823_+\|head	phage head morphogenesis, SPP1 gp7 family domain protein	F1C5D8	Cronobacter_phage	1.3e-113	68.0
AVJ78524.1\|33243_34632_+	hypothetical protein	F1C5D9	Cronobacter_phage	2.2e-152	59.0
AVJ78525.1\|34635_35070_+	hypothetical protein	F1C5E0	Cronobacter_phage	1.4e-49	72.2
AVJ78526.1\|35080_36178_+\|coat	putative phage coat protein	F1C5E1	Cronobacter_phage	1.7e-160	77.5
AVJ78527.1\|36187_36553_+	hypothetical protein	NA	NA	NA	NA
AVJ78528.1\|36555_36936_+	hypothetical protein	F1C5E2	Cronobacter_phage	3.1e-29	55.3
AVJ78529.1\|36935_37421_+	50S ribosomal L13 domain protein	G8GWD9	Rhodobacter_phage	5.6e-31	65.2
AVJ78530.1\|37431_37782_+	hypothetical protein	G0ZNE2	Cronobacter_phage	8.9e-39	67.0
AVJ78531.1\|37778_37985_+	hypothetical protein	NA	NA	NA	NA
AVJ78532.1\|38392_38776_+	hypothetical protein	F1C5E4	Cronobacter_phage	6.1e-41	64.6
AVJ78533.1\|38839_39583_+	bacterial Ig-like domain family protein	F1C5E5	Cronobacter_phage	4.5e-72	85.4
AVJ78534.1\|39650_39779_-	hypothetical protein	NA	NA	NA	NA
AVJ78535.1\|39884_40325_+	hypothetical protein	F1C5E8	Cronobacter_phage	2.6e-43	59.9
AVJ78536.1\|40383_43866_+	tape measure domain protein	R9TMK1	Aeromonas_phage	7.9e-252	60.3
AVJ78537.1\|43868_44363_+	hypothetical protein	F1C5F0	Cronobacter_phage	2.7e-57	64.0
AVJ78538.1\|44362_44833_+	hypothetical protein	R9TPR6	Aeromonas_phage	2.5e-44	55.2
AVJ78539.1\|45204_47688_+\|tail	phage tail family protein	F1C5A7	Cronobacter_phage	3.8e-285	59.5
AVJ78540.1\|47745_50004_+	GDSL-like Lipase/Acylhydrolase family protein	W6PEG9	Cronobacter_phage	2.2e-117	37.4
AVJ78541.1\|50350_50491_-	hypothetical protein	NA	NA	NA	NA
AVJ78542.1\|51048_51162_-	hypothetical protein	NA	NA	NA	NA
AVJ78543.1\|51442_52615_+\|integrase	phage integrase family protein	Q7M297	Enterobacteria_phage	4.5e-111	49.5
AVJ78544.1\|52611_52800_-	prophage CP4-57 regulatory family protein	NA	NA	NA	NA
AVJ78545.1\|52796_54098_-	SNF2 family N-terminal domain protein	Q3LZN8	Bacteriophage	4.3e-195	73.3
AVJ78546.1\|54255_54969_+	putative membrane protein	NA	NA	NA	NA
AVJ78547.1\|54961_55231_-	VRR-NUC domain protein	B6SD64	Bacteriophage	1.0e-26	65.9
AVJ78548.1\|55230_55425_-	hypothetical protein	NA	NA	NA	NA
AVJ78549.1\|55417_55636_-	hypothetical protein	NA	NA	NA	NA
55439:55453	attR	NA	NA	NA	NA
AVJ78550.1\|55640_56798_-	DNA polymerase A family protein	B6SD65	Bacteriophage	8.9e-160	69.4
AVJ78551.1\|56769_58269_+	hypothetical protein	A0A2H4JCA3	uncultured_Caudovirales_phage	1.9e-202	70.9
AVJ78552.1\|58289_60284_+\|tail	phage T7 tail fiber family protein	G3M191	Escherichia_virus	1.6e-108	44.0
AVJ78553.1\|60312_61446_-	acyltransferase family protein	A0A2H4JA46	uncultured_Caudovirales_phage	3.8e-22	28.3
AVJ78554.1\|61463_61631_-	hypothetical protein	NA	NA	NA	NA
AVJ78555.1\|61841_62072_+\|lysis	lysis S family protein	A5LH82	Enterobacteria_phage	3.8e-22	69.6
AVJ78556.1\|62052_62592_+	phage lysozyme family protein	H6WRZ4	Salmonella_phage	1.9e-88	86.5
AVJ78557.1\|62588_62951_+	putative prophage exported protein	R9TPM9	Aeromonas_phage	7.1e-15	47.9

DBSCAN-SWA_2

900586 : 960929

Enterobacterial_phage(29.63%)

integrase,tRNA,tail,capsid,portal,head,terminase

attL 894191:894208|attR 968684:968701

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
894191:894208	attL	NA	NA	NA	NA
AVJ79388.1\|900586_901699_-\|tRNA	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	NA	NA	NA	NA
AVJ79389.1\|901739_902213_-	phosphatase NudJ	NA	NA	NA	NA
AVJ79390.1\|902212_902875_-	pseudouridine synthase family protein	NA	NA	NA	NA
AVJ79391.1\|902992_904243_+	isocitrate dehydrogenase, NADP-dependent	Q77Z09	Phage_21	7.9e-21	94.4
AVJ79392.1\|904319_904565_+	hypothetical protein	NA	NA	NA	NA
AVJ79393.1\|904569_906069_-	CSS motif domain associated with EAL family protein	NA	NA	NA	NA
AVJ79394.1\|906655_906904_+	transglycosylase associated family protein	NA	NA	NA	NA
AVJ79395.1\|907176_908205_-	putative diguanylate cyclase YeaP	G3MA91	Bacillus_virus	3.8e-13	32.6
AVJ79396.1\|908456_908585_+	hypothetical protein	NA	NA	NA	NA
AVJ79397.1\|908631_908772_+	hypothetical protein	NA	NA	NA	NA
AVJ79398.1\|908852_909158_+	hypothetical protein	NA	NA	NA	NA
AVJ79399.1\|909158_909503_-	hypothetical protein	NA	NA	NA	NA
AVJ79400.1\|909652_910360_+	glutamine amidotransferase class-I family protein	NA	NA	NA	NA
AVJ79401.1\|910391_911579_-	cyanate transporter family protein	NA	NA	NA	NA
AVJ79402.1\|911678_912470_+	helix-turn-helix domain protein	NA	NA	NA	NA
AVJ79403.1\|912453_912900_-	hypothetical protein	NA	NA	NA	NA
AVJ79404.1\|913006_915043_-	glycosyl hydrolases 31 family protein	NA	NA	NA	NA
AVJ79405.1\|915058_916390_-	inner membrane symporter YicJ	NA	NA	NA	NA
AVJ79406.1\|916656_916779_+	putative membrane protein	NA	NA	NA	NA
AVJ79407.1\|916799_917300_-\|tRNA	ybaK / prolyl-tRNA synthetases associated domain protein	NA	NA	NA	NA
AVJ79408.1\|917519_918662_-\|integrase	phage integrase family protein	O21929	Phage_21	6.4e-94	49.3
AVJ79409.1\|918935_919205_-	hypothetical protein	M9NZE4	Enterobacteria_phage	6.5e-13	88.9
AVJ79410.1\|919208_919385_-	putative yheA protein	A0A2R2X2A8	Escherichia_phage	2.7e-20	75.9
AVJ79411.1\|919386_920058_-	ead/Ea22-like family protein	A0A088CC42	Shigella_phage	1.7e-70	52.8
AVJ79412.1\|920054_920315_-	putative orf-90	T1S9K2	Salmonella_phage	3.1e-36	91.7
AVJ79413.1\|920311_920824_-	hypothetical protein	F1C5B6	Cronobacter_phage	1.9e-13	69.6
AVJ79414.1\|920820_921648_-	hypothetical protein	K7PKM7	Enterobacterial_phage	1.5e-124	86.7
AVJ79415.1\|921647_921896_-	hypothetical protein	K7PJS4	Enterobacterial_phage	7.0e-30	85.2
AVJ79416.1\|922363_922489_-	hypothetical protein	A0A2P1JUD4	Erwinia_phage	1.2e-06	69.7
AVJ79417.1\|923278_923905_-	repressor protein C2	K7PM82	Enterobacteria_phage	1.6e-46	48.8
AVJ79418.1\|924004_924220_+	putative dicC, repressor of division inhibition protein	NA	NA	NA	NA
AVJ79419.1\|924242_924797_+	putative e14 prophage DNA-binding transcriptional regulator	S5FXP0	Shigella_phage	2.4e-46	54.2
AVJ79420.1\|925129_926008_+	helix-turn-helix domain protein	U5P0A0	Shigella_phage	5.4e-40	80.8
AVJ79421.1\|926004_926499_+	hypothetical protein	NA	NA	NA	NA
AVJ79422.1\|926498_927158_+	MT-A70 family protein	I6PDF5	Cronobacter_phage	9.4e-98	78.9
AVJ79423.1\|927154_927382_+	hypothetical protein	NA	NA	NA	NA
AVJ79424.1\|927378_927699_+	lexA DNA binding domain protein	K7PHB4	Enterobacterial_phage	5.5e-43	77.4
AVJ79425.1\|927875_928085_+	endodeoxyribonuclease RusA family protein	K7PKN5	Enterobacterial_phage	5.3e-31	88.4
AVJ79426.1\|928081_929071_+	hypothetical protein	K7PJS6	Enterobacterial_phage	3.0e-164	84.2
AVJ79427.1\|929084_929663_+	hypothetical protein	A0A0U2S606	Escherichia_phage	5.6e-46	52.8
AVJ79428.1\|930241_930637_+	putative membrane protein	K7PHB9	Enterobacterial_phage	1.2e-63	98.5
AVJ79429.1\|930647_930905_+	hypothetical protein	K7PKN9	Enterobacterial_phage	9.5e-38	92.9
AVJ79430.1\|930904_931531_+	chitinase class I family protein	K7PJS7	Enterobacterial_phage	2.4e-111	95.2
AVJ79431.1\|931538_931814_+	hypothetical protein	K7PGW4	Enterobacterial_phage	1.5e-12	93.4
AVJ79432.1\|931806_931989_+	hypothetical protein	K7PM01	Enterobacterial_phage	3.4e-18	85.1
AVJ79433.1\|932071_932449_-	hypothetical protein	NA	NA	NA	NA
AVJ79434.1\|932524_933982_+	putative glycosyl transferase	K7PKP3	Enterobacterial_phage	2.7e-214	73.0
AVJ79435.1\|934093_934225_-	hypothetical protein	Q38575	Escherichia_phage	8.5e-11	74.4
AVJ79436.1\|934482_935073_+	hypothetical protein	S4TR53	Salmonella_phage	1.8e-100	86.2
AVJ79437.1\|935065_935434_+	HNH endonuclease family protein	S4TTG9	Salmonella_phage	2.8e-59	91.8
AVJ79438.1\|935539_936034_+\|terminase	terminase small subunit	S4TNN3	Salmonella_phage	5.4e-82	98.8
AVJ79439.1\|936033_937692_+	phage Terminase family protein	S4TSQ6	Salmonella_phage	0.0e+00	98.6
AVJ79440.1\|937750_939685_+\|capsid	phage major capsid protein, HK97 family	S4TNE3	Salmonella_phage	0.0e+00	93.2
AVJ79441.1\|940098_941250_+\|portal	phage portal protein, HK97 family	S4TTG7	Salmonella_phage	5.0e-203	92.4
AVJ79442.1\|941246_942290_+	carbohydrate binding domain protein	S4TNN1	Salmonella_phage	1.2e-102	83.9
AVJ79443.1\|942286_942613_+\|head,tail	phage gp6-like head-tail connector family protein	S4TSQ3	Salmonella_phage	2.9e-47	88.9
AVJ79444.1\|942968_943418_+	hypothetical protein	K7P6X4	Enterobacteria_phage	1.4e-73	98.7
AVJ79445.1\|943414_943762_+	hypothetical protein	K7PM93	Enterobacterial_phage	1.0e-47	81.6
AVJ79446.1\|943935_944466_+	kilA-N domain protein	B8K1H1	Salmonella_phage	1.1e-80	84.0
AVJ79447.1\|944593_945037_+\|tail	phage major tail 2 family protein	K7PHL2	Enterobacterial_phage	4.6e-72	93.8
AVJ79448.1\|945045_945429_+\|tail	phage tail assembly chaperone family protein	K7PKV6	Enterobacterial_phage	4.4e-63	93.7
AVJ79449.1\|945509_945716_+	hypothetical protein	Q9MCS5	Enterobacteria_phage	1.4e-31	97.1
AVJ79450.1\|945899_946106_+	hypothetical protein	S4TR42	Salmonella_phage	9.9e-30	91.2
AVJ79451.1\|946152_949644_+\|tail	phage tail tape measure protein, lambda family	A0A2H4JHR1	uncultured_Caudovirales_phage	0.0e+00	86.9
AVJ79452.1\|949646_949985_+\|tail	phage minor tail family protein	K7PKL8	Enterobacterial_phage	7.3e-38	59.8
AVJ79453.1\|949981_950740_+\|tail	phage minor tail protein L	A0A1W6JNX9	Morganella_phage	1.0e-95	64.0
AVJ79454.1\|950742_951453_+	nlpC/P60 family protein	F1C573	Cronobacter_phage	1.3e-97	70.2
AVJ79455.1\|951452_952040_+\|tail	bacteriophage lambda tail assembly I family protein	A0A1P8DTG7	Proteus_phage	3.0e-47	46.9
AVJ79456.1\|952092_955650_+	hypothetical protein	Q9MCU0	Escherichia_phage	0.0e+00	71.8
AVJ79457.1\|955693_956008_+	hypothetical protein	A0A2P0WA17	Enterobacter_phage	1.5e-32	64.7
AVJ79458.1\|956008_956680_+	hypothetical protein	A0A2P0WA07	Enterobacter_phage	2.6e-87	73.1
AVJ79459.1\|956787_957021_+	putative conversion resistant protein Cor	E4WL42	Enterobacteria_phage	3.9e-30	78.9
AVJ79460.1\|957079_958363_+\|tail	putative tail fiber	K7PHF0	Enterobacteria_phage	6.2e-146	63.3
AVJ79461.1\|958456_958723_-	dinI-like family protein	K7PKR6	Enterobacteria_phage	1.8e-39	94.3
AVJ79462.1\|959253_959382_+	hypothetical protein	K7PGV5	Enterobacterial_phage	8.6e-08	65.9
AVJ79463.1\|959344_959458_-	hypothetical protein	NA	NA	NA	NA
AVJ79464.1\|959645_960929_-	hypothetical protein	A0A140HLI1	Bacillus_phage	1.1e-09	28.3
968684:968701	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1214585 : 1239380

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVJ79721.1\|1214585_1215245_+	chloramphenicol acetyltransferase	G3CFL0	Escherichia_phage	8.3e-78	62.6
AVJ79722.1\|1215301_1215613_-	yebG family protein	NA	NA	NA	NA
AVJ79723.1\|1215721_1216336_-	tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	1.6e-27	33.7
AVJ79724.1\|1216381_1217236_-	DMSO reductase anchor subunit family protein	A0A077SK59	Escherichia_phage	2.0e-23	34.9
AVJ79725.1\|1217237_1217855_-	dimethylsulfoxide reductase, chain B	A0A077SL61	Escherichia_phage	1.0e-74	59.1
AVJ79726.1\|1217865_1218033_-	anaerobic dimethyl sulfoxide reductase chain A domain protein	A0A077SK27	Escherichia_phage	1.4e-13	69.1
AVJ79727.1\|1218020_1220291_-	anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein	A0A077SK27	Escherichia_phage	2.2e-186	48.2
AVJ79728.1\|1220421_1220727_-	hypothetical protein	NA	NA	NA	NA
AVJ79729.1\|1220829_1221684_-	glycosyltransferase 17 family protein	M1I711	Paramecium_bursaria_Chlorella_virus	2.4e-24	32.5
AVJ79730.1\|1221876_1222587_+	hypothetical protein	NA	NA	NA	NA
AVJ79731.1\|1222604_1223165_-	spermidine N(1)-acetyltransferase	NA	NA	NA	NA
AVJ79732.1\|1223164_1223503_-	hypothetical protein	NA	NA	NA	NA
AVJ79733.1\|1223653_1223980_+	hypothetical protein	A0A218MNG8	uncultured_virus	1.6e-21	54.5
AVJ79734.1\|1224091_1225306_+	mandelate racemase / muconate lactonizing enzyme, C-terminal domain protein	Q6A202	Oenococcus_phage	2.2e-47	29.7
AVJ79735.1\|1225320_1226340_+	zinc-binding dehydrogenase family protein	NA	NA	NA	NA
AVJ79736.1\|1226413_1227793_+	sugar (and other) transporter family protein	NA	NA	NA	NA
AVJ79737.1\|1228016_1229480_+	mannitol dehydrogenase Rossmann domain protein	H8ZJP8	Ostreococcus_tauri_virus	1.9e-45	30.3
AVJ79738.1\|1229524_1229728_-	putative selenoprotein YdfZ	J9Q802	Salmonella_phage	4.4e-14	56.7
AVJ79739.1\|1230015_1230447_+	universal stress protein G	A0A1W6JNV4	Morganella_phage	1.5e-16	35.2
AVJ79740.1\|1230481_1231168_-	hypothetical protein	NA	NA	NA	NA
AVJ79741.1\|1231258_1232005_-	NADP-dependent 3-hydroxy acid dehydrogenase YdfG	NA	NA	NA	NA
AVJ79742.1\|1232148_1234182_+	peptidyl-dipeptidase dcp	A0A1V0SIU1	Klosneuvirus	3.8e-20	22.4
AVJ79743.1\|1235585_1235804_-	cold shock protein CspA	A0A1W6JNX5	Morganella_phage	8.3e-19	62.7
AVJ79744.1\|1236171_1236861_-	hypothetical protein	A0A2H4J5W2	uncultured_Caudovirales_phage	1.7e-81	60.5
AVJ79745.1\|1237124_1237364_-	dinI-like family protein	K7PKM2	Enterobacterial_phage	1.5e-32	91.1
AVJ79746.1\|1237690_1238110_+	protein UmuD	A0A1W6JNS2	Morganella_phage	7.2e-35	56.7
AVJ79747.1\|1238140_1238263_-	hypothetical protein	NA	NA	NA	NA
AVJ79748.1\|1238261_1239380_+	IMS HHH motif family protein	I6RSM4	Salmonella_phage	1.2e-198	90.9

DBSCAN-SWA_4

1411555 : 1436166

Shigella_phage(42.86%)

integrase,transposase

attL 1408798:1408812|attR 1440421:1440434

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1408798:1408812	attL	NA	NA	NA	NA
AVJ79898.1\|1411555_1412479_-\|transposase	transposase DDE domain protein	Q1MVF0	Enterobacteria_phage	4.6e-175	98.7
1408798:1408812	attL	NA	NA	NA	NA
AVJ79899.1\|1412598_1413231_+	hypothetical protein	NA	NA	NA	NA
AVJ79900.1\|1413259_1414663_-\|integrase	integrase core domain protein	NA	NA	NA	NA
AVJ79901.1\|1414847_1416305_+\|integrase	phage integrase family protein	NA	NA	NA	NA
AVJ79902.1\|1416294_1417845_+\|integrase	phage integrase family protein	NA	NA	NA	NA
AVJ79903.1\|1417841_1420205_+	hypothetical protein	NA	NA	NA	NA
1418397:1418411	attR	NA	NA	NA	NA
AVJ79904.1\|1420204_1420648_+	hypothetical protein	NA	NA	NA	NA
1418397:1418411	attR	NA	NA	NA	NA
AVJ79905.1\|1420845_1421007_-	hypothetical protein	NA	NA	NA	NA
AVJ79906.1\|1421275_1421836_+	hypothetical protein	NA	NA	NA	NA
AVJ79907.1\|1422921_1423980_-	hypothetical protein	NA	NA	NA	NA
AVJ79908.1\|1424001_1424115_-	hypothetical protein	NA	NA	NA	NA
AVJ79909.1\|1424418_1425423_-\|transposase	transposase family protein	NA	NA	NA	NA
AVJ79910.1\|1426153_1426441_+	hypothetical protein	NA	NA	NA	NA
AVJ79911.1\|1426592_1426748_-	putative orf86	NA	NA	NA	NA
AVJ79912.1\|1427185_1427398_+\|transposase	transposase family protein	NA	NA	NA	NA
AVJ79913.1\|1427439_1427865_+	HTH-like domain protein	NA	NA	NA	NA
AVJ79914.1\|1428161_1428275_+	hypothetical protein	NA	NA	NA	NA
AVJ79915.1\|1428471_1429980_+	group II intron, maturase-specific domain protein	A0A0U4J920	Pseudomonas_phage	3.6e-44	31.8
AVJ79916.1\|1430102_1430519_+\|integrase	integrase core domain protein	U5P429	Shigella_phage	6.0e-42	59.0
AVJ79917.1\|1430619_1431270_-	hypothetical protein	NA	NA	NA	NA
AVJ79918.1\|1431272_1432925_-	recF/RecN/SMC N terminal domain protein	C7BGE8	Burkholderia_phage	1.9e-09	30.2
AVJ79919.1\|1432921_1433857_-	reverse transcriptase family protein	Q7M2A9	Enterobacteria_phage	2.9e-28	29.9
AVJ79920.1\|1435018_1435297_+\|transposase	transposase family protein	U5P4I9	Shigella_phage	1.5e-33	93.8
AVJ79921.1\|1435312_1435429_+	putative membrane protein	NA	NA	NA	NA
AVJ79922.1\|1435551_1436166_+	DDE domain protein	U5P429	Shigella_phage	1.6e-107	93.6
1440421:1440434	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1648987 : 1683895

Acinetobacter_phage(28.57%)

integrase,tRNA,capsid,transposase,protease

attL 1683286:1683304|attR 1685948:1685966

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVJ80126.1\|1648987_1650004_-\|protease	putative protease SohB	A0A2H4UUF9	Bodo_saltans_virus	3.5e-19	28.7
AVJ80127.1\|1650110_1650227_-	hypothetical protein	NA	NA	NA	NA
AVJ80128.1\|1650286_1651048_+	hypothetical protein	NA	NA	NA	NA
AVJ80129.1\|1651044_1651635_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
AVJ80130.1\|1651670_1652546_-	pseudouridine synthase family protein	NA	NA	NA	NA
AVJ80131.1\|1652646_1654332_+\|integrase	phage integrase family protein	NA	NA	NA	NA
AVJ80132.1\|1654552_1655224_+	EAL domain protein	NA	NA	NA	NA
AVJ80133.1\|1655266_1657132_-	hypothetical protein	A0A1D7XFE4	Escherichia_phage	5.1e-64	32.3
AVJ80134.1\|1657124_1657322_-	hypothetical protein	NA	NA	NA	NA
AVJ80135.1\|1657455_1658391_-\|capsid	phage major capsid E family protein	NA	NA	NA	NA
AVJ80136.1\|1658503_1658866_-	hypothetical protein	NA	NA	NA	NA
AVJ80137.1\|1658862_1659084_-	hypothetical protein	NA	NA	NA	NA
AVJ80138.1\|1659719_1660061_-	hypothetical protein	NA	NA	NA	NA
AVJ80139.1\|1660053_1660437_-	hypothetical protein	NA	NA	NA	NA
AVJ80140.1\|1660659_1660812_-	hypothetical protein	NA	NA	NA	NA
AVJ80141.1\|1660849_1661668_-\|transposase	transposase C of IS166 homeodomain protein	NA	NA	NA	NA
AVJ80142.1\|1661917_1662073_-	hypothetical protein	NA	NA	NA	NA
AVJ80143.1\|1662512_1662758_-	hypothetical protein	NA	NA	NA	NA
AVJ80144.1\|1663932_1664511_+\|integrase	phage integrase family protein	A0A1B1P7Y2	Bacillus_phage	2.0e-11	28.1
AVJ80145.1\|1664711_1665917_+	glycosyl transferase 2 family protein	A0A0F7L2F7	uncultured_marine_virus	8.2e-07	33.3
AVJ80146.1\|1666306_1666927_-\|tRNA	tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family	NA	NA	NA	NA
AVJ80147.1\|1666923_1667805_-	PHP domain protein	NA	NA	NA	NA
AVJ80148.1\|1668083_1669646_+	anthranilate synthase component I	NA	NA	NA	NA
AVJ80149.1\|1669645_1671241_+	anthranilate synthase component II	A0A0N7IRD9	Acinetobacter_phage	8.0e-50	37.0
AVJ80150.1\|1671244_1672603_+	indole-3-glycerol phosphate synthase family protein	A0A0P0IR83	Acinetobacter_phage	6.6e-37	41.0
AVJ80151.1\|1672613_1673807_+	tryptophan synthase, beta subunit	NA	NA	NA	NA
AVJ80152.1\|1673806_1674616_+	tryptophan synthase, alpha subunit	NA	NA	NA	NA
AVJ80153.1\|1674790_1676002_+	hypothetical protein	NA	NA	NA	NA
AVJ80154.1\|1675998_1676232_+	sirA-like family protein	NA	NA	NA	NA
AVJ80155.1\|1676518_1677151_-	outer membrane protein W	NA	NA	NA	NA
AVJ80156.1\|1677863_1678607_+	hypothetical protein	NA	NA	NA	NA
AVJ80157.1\|1678620_1679160_+	intracellular septation protein A	NA	NA	NA	NA
AVJ80158.1\|1679243_1679387_-	hypothetical protein	NA	NA	NA	NA
AVJ80159.1\|1679340_1681527_+	tonB-dependent siderophore receptor family protein	NA	NA	NA	NA
AVJ80160.1\|1681624_1682020_+	thioesterase superfamily protein	NA	NA	NA	NA
AVJ80161.1\|1682058_1682763_-	tonB family C-terminal domain protein	NA	NA	NA	NA
AVJ80162.1\|1682984_1683281_+	protein YciI	NA	NA	NA	NA
1683286:1683304	attL	NA	NA	NA	NA
AVJ80163.1\|1683607_1683895_+\|integrase	integrase core domain protein	U5P429	Shigella_phage	8.4e-35	89.2
AVJ80163.1\|1683607_1683895_+\|integrase	integrase core domain protein	U5P429	Shigella_phage	8.4e-35	89.2
1685948:1685966	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2305464 : 2382753

Burkholderia_virus(45.24%)

plate,integrase,tRNA,tail,head,protease,terminase

attL 2357862:2357878|attR 2377132:2377148

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVJ80748.1\|2305464_2306277_-\|tRNA	tRNA pseudouridine(38-40) synthase	NA	NA	NA	NA
AVJ80749.1\|2306276_2307290_-	semialdehyde dehydrogenase, dimerization domain protein	NA	NA	NA	NA
AVJ80750.1\|2307357_2308494_-	hypothetical protein	A0A2R8FDS8	Brazilian_cedratvirus	1.8e-19	27.3
AVJ80751.1\|2308605_2309610_+	flagellar regulator flk	NA	NA	NA	NA
AVJ80752.1\|2309694_2310873_-	hypothetical protein	NA	NA	NA	NA
AVJ80753.1\|2310941_2312159_-	3-oxoacyl-[acyl-carrier-protein] synthase 1	NA	NA	NA	NA
AVJ80754.1\|2312317_2314315_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC	NA	NA	NA	NA
AVJ80755.1\|2314380_2314656_-	yfcL family protein	NA	NA	NA	NA
AVJ80756.1\|2314669_2315215_-	elongation factor P hydroxylase	NA	NA	NA	NA
AVJ80757.1\|2315214_2316024_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
AVJ80758.1\|2316023_2316848_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
AVJ80759.1\|2316850_2317936_-	chorismate synthase	A0A291AU41	Pandoravirus	2.5e-87	46.6
AVJ80760.1\|2317996_2318929_-	protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific	NA	NA	NA	NA
AVJ80761.1\|2319074_2319626_+	smr domain protein	NA	NA	NA	NA
AVJ80762.1\|2319672_2320158_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA
AVJ80763.1\|2320367_2322515_-	fatty oxidation complex, alpha subunit FadJ	NA	NA	NA	NA
AVJ80764.1\|2322514_2323825_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
AVJ80765.1\|2324062_2324347_-	hypothetical protein	NA	NA	NA	NA
AVJ80766.1\|2324719_2326003_+	outer membrane transport family protein	NA	NA	NA	NA
AVJ80767.1\|2326047_2326800_-	putative phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
AVJ80768.1\|2327115_2328045_+	inner membrane protein YfdC	E7DYY8	Enterobacteria_phage	4.8e-140	83.6
AVJ80769.1\|2328545_2329361_+	lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein	A0A1W6JP29	Morganella_phage	1.6e-75	54.3
AVJ80770.1\|2329419_2329554_+	hypothetical protein	NA	NA	NA	NA
AVJ80771.1\|2329850_2331086_-	glutamate-pyruvate aminotransferase AlaC	NA	NA	NA	NA
AVJ80772.1\|2331472_2333170_+	hypothetical protein	NA	NA	NA	NA
AVJ80773.1\|2333183_2333915_+	response regulator	A0A2R2ZGH8	Clostridioides_phage	1.1e-14	25.1
AVJ80774.1\|2333950_2334916_-	glucokinase	NA	NA	NA	NA
AVJ80775.1\|2335121_2336357_+	voltage gated chloride channel family protein	NA	NA	NA	NA
AVJ80776.1\|2336357_2338013_-	indolepyruvate decarboxylase	NA	NA	NA	NA
AVJ80777.1\|2338199_2338745_+	aldo/keto reductase family protein	NA	NA	NA	NA
AVJ80778.1\|2338714_2339296_-	DNA-invertase hin	A0A0A7NPV4	Enterobacteria_phage	7.1e-65	70.9
AVJ80779.1\|2339473_2339896_-\|tail	caudovirales tail fiber assembly family protein	A0A1B0V844	Salmonella_phage	5.0e-28	50.0
AVJ80780.1\|2339898_2341485_-\|tail	putative tail fiber	A0A1B0V7G4	Salmonella_phage	1.3e-140	53.4
AVJ80781.1\|2341487_2342066_-\|tail	phage tail protein I	A4JWL7	Burkholderia_virus	7.5e-67	66.3
AVJ80782.1\|2342058_2343162_-\|plate	baseplate J-like family protein	A4JWL6	Burkholderia_virus	4.9e-107	54.0
AVJ80783.1\|2343152_2343500_-	lysozyme family protein	Q6QIA0	Burkholderia_phage	7.8e-35	63.3
AVJ80784.1\|2343554_2344067_-\|plate	phage baseplate assembly V family protein	A4JWL4	Burkholderia_virus	1.8e-19	37.8
AVJ80785.1\|2344066_2345236_-	phage late control D family protein	Q6QIA2	Burkholderia_phage	3.9e-86	48.7
AVJ80786.1\|2345223_2345436_-	phage Tail Protein X family protein	Q6QIA3	Burkholderia_phage	1.5e-17	57.1
AVJ80787.1\|2345435_2346320_-	phage P2 GpU family protein	A4JWL1	Burkholderia_virus	5.6e-53	45.4
AVJ80788.1\|2346319_2349160_-\|tail	phage tail tape measure protein, TP901 family, core region	A4JWL0	Burkholderia_virus	2.0e-168	45.4
AVJ80789.1\|2349252_2349390_-	phage P2 GpE family protein	NA	NA	NA	NA
AVJ80790.1\|2349355_2349676_-	mu-like prophage FluMu gp41 family protein	NA	NA	NA	NA
AVJ80791.1\|2349774_2350056_-	hypothetical protein	A5VWB2	Enterobacteria_phage	1.4e-13	43.3
AVJ80792.1\|2350058_2350580_-\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	2.3e-67	68.2
AVJ80793.1\|2350579_2352007_-\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.6e-214	77.8
AVJ80794.1\|2351996_2352248_-	hypothetical protein	NA	NA	NA	NA
AVJ80795.1\|2352247_2352712_-	gp37 family protein	Q6QIB2	Burkholderia_phage	3.7e-40	52.3
AVJ80796.1\|2352711_2353158_-	hypothetical protein	A4JWK2	Burkholderia_virus	7.9e-32	51.7
AVJ80797.1\|2353159_2353516_-	putative dihydrolipoamide acyltransferase	NA	NA	NA	NA
AVJ80798.1\|2353526_2354480_-	hypothetical protein	A4JWK0	Burkholderia_virus	7.1e-62	42.3
AVJ80799.1\|2354493_2355591_-\|protease	putative protease	A4JWJ9	Burkholderia_virus	3.5e-97	50.5
AVJ80800.1\|2355795_2356254_-	phage virion morphogenesis protein	Q6QIB8	Burkholderia_phage	3.0e-26	40.1
AVJ80801.1\|2356256_2357078_-\|head	phage head morphogenesis, SPP1 gp7 family domain protein	A4JWJ6	Burkholderia_virus	2.2e-96	61.2
AVJ80802.1\|2357058_2358558_-	hypothetical protein	A4JWJ5	Burkholderia_virus	2.2e-171	60.7
2357862:2357878	attL	NA	NA	NA	NA
AVJ80803.1\|2358557_2360153_-\|terminase	terminase-like family protein	A4JWJ4	Burkholderia_virus	6.7e-182	61.8
AVJ80804.1\|2360149_2360695_-	hypothetical protein	A4JWJ3	Burkholderia_virus	2.3e-57	67.0
AVJ80805.1\|2360694_2361006_-	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	3.6e-31	62.6
AVJ80806.1\|2360998_2361331_-	putative phage membrane protein	Q6QIC4	Burkholderia_phage	4.1e-17	46.7
AVJ80807.1\|2361327_2361981_-	putative lipoprotein	A0A0S4L1H0	Pseudomonas_phage	1.2e-09	33.7
AVJ80808.1\|2361970_2362693_-	transglycosylase SLT domain protein	Q5ZQZ1	Pseudomonas_phage	7.0e-62	58.2
AVJ80809.1\|2362695_2363046_-	hypothetical protein	A4JWP3	Burkholderia_virus	2.6e-22	53.0
AVJ80810.1\|2363225_2363483_+	hypothetical protein	NA	NA	NA	NA
AVJ80811.1\|2363503_2364064_-	hypothetical protein	NA	NA	NA	NA
AVJ80812.1\|2364312_2365083_+	DNA adenine methylase family protein	A2I2Y7	Vibrio_virus	1.0e-98	65.3
AVJ80813.1\|2365146_2365344_-	hypothetical protein	NA	NA	NA	NA
AVJ80814.1\|2365622_2365766_-	putative phage repressor protein	NA	NA	NA	NA
AVJ80815.1\|2366128_2366353_+	hypothetical protein	NA	NA	NA	NA
AVJ80816.1\|2366349_2366655_+	winged helix-turn-helix DNA-binding family protein	Q5ZR02	Pseudomonas_phage	7.1e-24	58.0
AVJ80817.1\|2366664_2367573_+	hypothetical protein	A4JWN3	Burkholderia_virus	6.3e-76	55.4
AVJ80818.1\|2367576_2369346_+\|integrase	integrase core domain protein	Q6QIE0	Burkholderia_phage	2.4e-228	68.5
AVJ80819.1\|2369356_2370523_+	molybdopterin guanine dinucleotide synthesis B family protein	A4JWN1	Burkholderia_virus	5.7e-122	60.9
AVJ80820.1\|2370525_2370795_+	putative prophage exported protein	NA	NA	NA	NA
AVJ80821.1\|2370812_2371424_+	hypothetical protein	A0A2D1GNM4	Pseudomonas_phage	2.1e-75	69.2
AVJ80822.1\|2371501_2371690_+	hypothetical protein	NA	NA	NA	NA
AVJ80823.1\|2371686_2371983_+	hypothetical protein	NA	NA	NA	NA
AVJ80824.1\|2371969_2372656_+	hypothetical protein	A0A1W6DYA0	Aeromonas_phage	4.8e-28	35.2
AVJ80825.1\|2372655_2372868_+	putative membrane protein	NA	NA	NA	NA
AVJ80826.1\|2372860_2373286_+	hypothetical protein	A4JWM5	Burkholderia_virus	1.8e-25	45.9
AVJ80827.1\|2373282_2373672_+	mor transcription activator family protein	A4JWM4	Burkholderia_virus	1.4e-29	53.4
AVJ80828.1\|2373849_2374401_+	aldo/keto reductase family protein	NA	NA	NA	NA
AVJ80829.1\|2374527_2374875_+	hypothetical protein	NA	NA	NA	NA
AVJ80830.1\|2374908_2376084_-	divalent metal cation transporter MntH	NA	NA	NA	NA
AVJ80831.1\|2376492_2377680_+	nucleoside permease NupC	NA	NA	NA	NA
2377132:2377148	attR	NA	NA	NA	NA
AVJ80832.1\|2377725_2379915_-	GGDEF domain protein	NA	NA	NA	NA
AVJ80833.1\|2380535_2380898_+	helix-turn-helix family protein	NA	NA	NA	NA
AVJ80834.1\|2380920_2381286_+	hypothetical protein	NA	NA	NA	NA
AVJ80835.1\|2381337_2382753_-\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA

DBSCAN-SWA_7

2540651 : 2621465

Escherichia_phage(18.6%)

integrase,tRNA,tail,capsid,transposase,portal,head,terminase

attL 2543619:2543635|attR 2627801:2627817

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVJ80978.1\|2540651_2541389_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
AVJ80979.1\|2541521_2542850_+	ATP-dependent RNA helicase SrmB	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	4.7e-48	33.5
AVJ80980.1\|2542902_2543286_-	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	1.4e-32	70.9
AVJ80981.1\|2543600_2544290_+	uracil-DNA glycosylase	A0A076JX67	Equid_alphaherpesvirus	7.9e-55	48.8
2543619:2543635	attL	NA	NA	NA	NA
AVJ80982.1\|2544329_2545415_-	RNA 2'-O ribose methyltransferase substrate binding family protein	NA	NA	NA	NA
AVJ80983.1\|2545619_2546039_+	thioredoxin	A0A0K2FIM3	Achromobacter_phage	1.2e-13	37.2
AVJ80984.1\|2546109_2546808_+	DTW domain protein	NA	NA	NA	NA
AVJ80985.1\|2546843_2549507_+	acetyltransferase family protein	NA	NA	NA	NA
AVJ80986.1\|2549616_2550972_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AVJ80987.1\|2551201_2551342_+	hypothetical protein	NA	NA	NA	NA
AVJ80988.1\|2551338_2552646_-	alpha-ketoglutarate permease	Q6JIH2	Burkholderia_virus	2.0e-43	29.4
AVJ80989.1\|2552797_2553151_-	hypothetical protein	A0A0C5AAP9	Cyanophage	3.3e-25	47.8
AVJ80990.1\|2558781_2561355_-	ATP-dependent chaperone protein ClpB	H6X3M6	Enterobacteria_phage	5.8e-127	35.4
AVJ80991.1\|2561484_2562216_-	multi-copper polyphenol oxidoreductase laccase family protein	NA	NA	NA	NA
AVJ80992.1\|2562212_2563193_-	ribosomal large subunit pseudouridine synthase D	NA	NA	NA	NA
AVJ80993.1\|2563324_2564062_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AVJ80994.1\|2564356_2564671_+	ribosome-associated inhibitor A	NA	NA	NA	NA
AVJ80995.1\|2564930_2566091_+	P-protein	NA	NA	NA	NA
AVJ80996.1\|2566087_2566960_-	SMP-30/Gluconolaconase/LRE-like region family protein	NA	NA	NA	NA
AVJ80997.1\|2567104_2567308_-	ogr/Delta-like zinc finger family protein	A0A2I8TV89	Erwinia_phage	1.1e-12	56.2
AVJ80998.1\|2567304_2567442_-	hypothetical protein	NA	NA	NA	NA
AVJ80999.1\|2567819_2568491_-	hypothetical protein	NA	NA	NA	NA
AVJ81000.1\|2568580_2568919_-	putative aminotransferase domain protein	Q858T3	Yersinia_virus	4.2e-09	58.9
AVJ81001.1\|2569097_2569595_+\|integrase	phage integrase family protein	S4TP66	Salmonella_phage	2.8e-62	72.1
AVJ81002.1\|2569780_2570902_-	T-protein	NA	NA	NA	NA
AVJ81003.1\|2570912_2571983_-	3-deoxy-7-phosphoheptulonate synthase	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.5e-89	51.5
AVJ81004.1\|2572382_2572565_+	hypothetical protein	NA	NA	NA	NA
AVJ81005.1\|2572524_2572998_+	hypothetical protein	NA	NA	NA	NA
AVJ81006.1\|2573074_2574211_+	putative diguanylate cyclase YfiN	A0A2K8I9Y5	Pseudomonas_phage	1.1e-05	39.8
AVJ81007.1\|2574223_2574706_+	ompA family protein	NA	NA	NA	NA
AVJ81008.1\|2574708_2576079_-	pepSY-associated TM helix family protein	NA	NA	NA	NA
AVJ81009.1\|2576117_2576522_-	hypothetical protein	NA	NA	NA	NA
AVJ81010.1\|2576654_2577002_-	ribosomal protein L19	NA	NA	NA	NA
AVJ81011.1\|2577045_2577813_-\|tRNA	tRNA (guanine(37)-N(1))-methyltransferase	NA	NA	NA	NA
AVJ81012.1\|2577844_2578381_-	16S rRNA processing protein RimM	NA	NA	NA	NA
AVJ81013.1\|2578399_2578648_-	ribosomal protein S16	NA	NA	NA	NA
AVJ81014.1\|2578764_2580126_-	signal recognition particle protein	NA	NA	NA	NA
AVJ81015.1\|2580292_2581084_+	inner membrane protein YpjD	NA	NA	NA	NA
AVJ81016.1\|2581148_2582390_+	hypothetical protein	NA	NA	NA	NA
AVJ81017.1\|2582442_2583036_-	protein GrpE	NA	NA	NA	NA
AVJ81018.1\|2583028_2583145_-	hypothetical protein	NA	NA	NA	NA
AVJ81019.1\|2583158_2584037_+	ATP-NAD kinase family protein	NA	NA	NA	NA
AVJ81020.1\|2584122_2585784_+	DNA repair protein RecN	NA	NA	NA	NA
AVJ81021.1\|2585922_2586261_+	smpA / OmlA family protein	NA	NA	NA	NA
AVJ81022.1\|2586322_2586610_-	persistence and stress-resistance antitoxin PasI	NA	NA	NA	NA
AVJ81023.1\|2586599_2587037_-	persistence and stress-resistance toxin PasT	NA	NA	NA	NA
AVJ81024.1\|2587193_2587676_+	ssrA-binding protein	W5RAM5	Staphylococcus_phage	6.8e-29	46.8
AVJ81025.1\|2588609_2589485_-	helix-turn-helix domain protein	A0A077SL42	Escherichia_phage	1.3e-65	45.8
AVJ81026.1\|2589685_2591410_-	bacterial flagellin C-terminal helical region family protein	NA	NA	NA	NA
AVJ81027.1\|2592613_2592766_+	hypothetical protein	NA	NA	NA	NA
AVJ81028.1\|2593111_2593897_-\|tail	putative tail fiber domain protein	K7PH95	Enterobacterial_phage	9.7e-126	84.2
AVJ81029.1\|2593905_2595144_-\|head	putative head binding protein	A0A1V0E5M2	Salmonella_phage	2.5e-152	65.2
AVJ81030.1\|2595205_2596174_-	hypothetical protein	G1CSU0	Cronobacter_virus	1.3e-55	41.1
AVJ81031.1\|2596177_2597785_-	hypothetical protein	S4TTF5	Salmonella_phage	3.7e-212	68.9
AVJ81032.1\|2597831_2599058_-\|capsid	phage major capsid protein, HK97 family	K7PM57	Enterobacteria_phage	2.3e-129	87.2
AVJ81033.1\|2599071_2600376_-\|portal	phage portal protein, HK97 family	K7PJU5	Enterobacteria_phage	8.1e-234	93.8
AVJ81034.1\|2600375_2602112_-	phage Terminase family protein	K7PKT2	Enterobacteria_phage	0.0e+00	99.7
AVJ81035.1\|2602111_2602432_-\|terminase	phage terminase, small subunit, P27 family	K7PHI2	Enterobacteria_phage	2.6e-53	99.1
AVJ81036.1\|2602901_2603030_+	putative membrane protein	NA	NA	NA	NA
AVJ81037.1\|2603092_2603680_-	putative glycosyl transferase	S4TR53	Salmonella_phage	7.8e-96	84.5
AVJ81038.1\|2603848_2604106_+	hypothetical protein	K7P7V5	Enterobacteria_phage	2.7e-32	95.1
AVJ81039.1\|2604406_2605360_-	hypothetical protein	S4TSQ9	Salmonella_phage	4.3e-176	92.1
AVJ81040.1\|2605406_2606261_-	DDE domain protein	U5P429	Shigella_phage	8.0e-49	41.9
AVJ81041.1\|2606257_2606557_-\|transposase	transposase family protein	NA	NA	NA	NA
AVJ81042.1\|2606601_2607111_-	glycosyl transferase domain protein	K7PKP3	Enterobacterial_phage	2.6e-87	96.3
AVJ81043.1\|2607301_2607592_+	lipoprotein bor	C6ZCX3	Enterobacteria_phage	6.3e-30	62.9
AVJ81044.1\|2607702_2607987_-	hypothetical protein	G8C7W3	Escherichia_phage	1.1e-26	67.0
AVJ81045.1\|2608053_2608266_-	hypothetical protein	K7PM01	Enterobacterial_phage	2.4e-15	83.7
AVJ81046.1\|2608273_2608423_-	hypothetical protein	NA	NA	NA	NA
AVJ81047.1\|2608718_2608838_+	hypothetical protein	NA	NA	NA	NA
AVJ81048.1\|2608903_2609173_-	hypothetical protein	G8C7W1	Escherichia_phage	4.8e-32	90.8
AVJ81049.1\|2609180_2609810_-	chitinase class I family protein	G8C7W0	Escherichia_phage	1.4e-114	97.6
AVJ81050.1\|2609809_2610088_-	hypothetical protein	G8C7V9	Escherichia_phage	9.6e-36	87.4
AVJ81051.1\|2610077_2610467_-	putative membrane protein	G8C7V8	Escherichia_phage	8.7e-59	93.8
AVJ81052.1\|2610821_2611163_-	HNH endonuclease family protein	C4ML56	Xanthomonas_virus	7.4e-14	45.8
AVJ81053.1\|2611601_2612384_-	antitermination family protein	F1C595	Cronobacter_phage	9.4e-113	79.1
AVJ81054.1\|2612380_2612692_-	hypothetical protein	NA	NA	NA	NA
AVJ81055.1\|2612693_2614565_-	AAA domain protein	K7PK08	Enterobacteria_phage	4.5e-230	61.3
AVJ81056.1\|2614668_2615691_-	replication domain protein	V5URT9	Shigella_phage	4.0e-47	55.6
AVJ81057.1\|2615683_2615854_-	hypothetical protein	NA	NA	NA	NA
AVJ81058.1\|2616651_2616930_+	peptidase S24-like family protein	G8C7U1	Escherichia_phage	1.5e-33	71.7
AVJ81059.1\|2617131_2617563_+	helix-turn-helix domain protein	NA	NA	NA	NA
AVJ81060.1\|2617629_2618016_+	peptidase S24-like family protein	F1C5A0	Cronobacter_phage	2.2e-38	60.5
AVJ81061.1\|2618155_2618347_+	hypothetical protein	NA	NA	NA	NA
AVJ81062.1\|2618339_2618747_+	hypothetical protein	A0A286S1Q6	Klebsiella_phage	2.1e-47	87.5
AVJ81063.1\|2619301_2619724_+	hypothetical protein	A0A286S1S2	Klebsiella_phage	1.6e-45	66.4
AVJ81064.1\|2619890_2620139_+	hypothetical protein	NA	NA	NA	NA
AVJ81065.1\|2620421_2621465_+\|integrase	phage integrase family protein	I6PDJ1	Cronobacter_phage	1.8e-180	90.2
2627801:2627817	attR	NA	NA	NA	NA

DBSCAN-SWA_8

3018907 : 3051150

Shigella_phage(44.44%)

integrase,transposase

attL 3007701:3007716|attR 3057173:3057188

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3007701:3007716	attL	NA	NA	NA	NA
AVJ81448.1\|3018907_3019207_-\|transposase	transposase family protein	NA	NA	NA	NA
AVJ81449.1\|3019251_3019740_-	KAP family P-loop domain protein	NA	NA	NA	NA
AVJ81450.1\|3020105_3020312_+	hypothetical protein	NA	NA	NA	NA
AVJ81451.1\|3020356_3020485_-	hypothetical protein	NA	NA	NA	NA
AVJ81452.1\|3020598_3020895_+	helix-turn-helix family protein	NA	NA	NA	NA
AVJ81453.1\|3021318_3021975_+	bacterial regulatory, tetR family protein	NA	NA	NA	NA
AVJ81454.1\|3022037_3023021_-	quinone oxidoreductase, YhdH/YhfP family protein	NA	NA	NA	NA
AVJ81455.1\|3023472_3023697_+	insA N-terminal domain protein	A0A2L1IV22	Escherichia_phage	2.0e-36	97.3
AVJ81456.1\|3023825_3024119_+\|transposase	putative transposase	U5P0U6	Shigella_phage	1.6e-44	89.7
AVJ81457.1\|3024265_3024412_-	hypothetical protein	NA	NA	NA	NA
AVJ81458.1\|3024388_3024508_+	transcriptional repressor FrmR	NA	NA	NA	NA
AVJ81459.1\|3024542_3025652_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	A0A0K0KVL7	Prochlorococcus_phage	2.2e-30	28.7
AVJ81460.1\|3025695_3026094_+	glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein	NA	NA	NA	NA
AVJ81461.1\|3026158_3026995_+	S-formylglutathione hydrolase	NA	NA	NA	NA
AVJ81462.1\|3027273_3027609_-\|integrase	integrase core domain protein	U5P429	Shigella_phage	6.3e-34	61.1
AVJ81463.1\|3027731_3029240_-	group II intron, maturase-specific domain protein	A0A0U4J920	Pseudomonas_phage	3.6e-44	31.8
AVJ81464.1\|3029436_3029550_-	hypothetical protein	NA	NA	NA	NA
AVJ81465.1\|3031214_3033866_+	excinuclease ABC subunit A	A0A1B1IVR3	uncultured_Mediterranean_phage	5.4e-152	34.1
AVJ81466.1\|3033880_3034183_-\|transposase	transposase IS66 family protein	A0A0P0ZEB3	Stx2-converting_phage	9.2e-24	72.0
AVJ81467.1\|3034806_3035940_-	alcohol dehydrogenase GroES-associated family protein	NA	NA	NA	NA
AVJ81468.1\|3036534_3036651_-	hypothetical protein	NA	NA	NA	NA
AVJ81469.1\|3037088_3037670_+	lysR substrate binding domain protein	NA	NA	NA	NA
AVJ81470.1\|3037783_3038443_-	3-beta hydroxysteroid dehydrogenase/isomerase family protein	NA	NA	NA	NA
AVJ81471.1\|3038737_3039574_-	helix-turn-helix domain protein	NA	NA	NA	NA
AVJ81472.1\|3039649_3040501_-	multidrug resistance efflux transporter family protein	NA	NA	NA	NA
AVJ81473.1\|3040607_3041483_-	metallo-beta-lactamase superfamily protein	NA	NA	NA	NA
AVJ81474.1\|3041565_3042360_-	lysR substrate binding domain protein	NA	NA	NA	NA
AVJ81475.1\|3042639_3042759_+	hypothetical protein	NA	NA	NA	NA
AVJ81476.1\|3042758_3043883_+	flavin oxidoreductase / NADH oxidase family protein	NA	NA	NA	NA
AVJ81477.1\|3043978_3044287_+	helix-turn-helix domain protein	NA	NA	NA	NA
AVJ81478.1\|3044818_3045187_-	HTH-like domain protein	U5P429	Shigella_phage	1.4e-53	82.2
AVJ81479.1\|3045243_3045522_-\|transposase	transposase family protein	U5P4I9	Shigella_phage	1.2e-33	93.8
AVJ81480.1\|3045612_3046041_-	hypothetical protein	NA	NA	NA	NA
AVJ81481.1\|3046044_3048123_-	hypothetical protein	NA	NA	NA	NA
AVJ81482.1\|3048149_3049916_-	hypothetical protein	NA	NA	NA	NA
AVJ81483.1\|3049902_3051150_-\|integrase	phage integrase family protein	NA	NA	NA	NA
3057173:3057188	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3110563 : 3161134

Salmonella_phage(80.43%)

plate,lysis,tRNA,tail,capsid,integrase,transposase,portal,head,terminase

attL 3116651:3116700|attR 3151496:3151545

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVJ81540.1\|3110563_3111577_-\|tRNA	tRNA threonylcarbamoyl adenosine modification protein YgjD	A0A0R6PI74	Moraxella_phage	5.3e-108	58.6
AVJ81541.1\|3111813_3112029_+	ribosomal protein S21	NA	NA	NA	NA
AVJ81542.1\|3112144_3113890_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.4e-76	39.0
AVJ81543.1\|3114043_3115888_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7
AVJ81544.1\|3115990_3116497_-	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
3116651:3116700	attL	NA	NA	NA	NA
AVJ81545.1\|3116881_3116995_+	hypothetical protein	NA	NA	NA	NA
AVJ81546.1\|3117121_3118222_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	1.1e-183	92.3
AVJ81547.1\|3118218_3118698_-	phage P2 GpU family protein	E5G6Q2	Salmonella_phage	5.5e-63	95.3
AVJ81548.1\|3118703_3122237_-\|tail	phage tail tape measure protein, TP901 family, core region	A0A1S6L010	Salmonella_phage	0.0e+00	68.6
AVJ81549.1\|3122229_3122349_-	phage P2 GpE family protein	E5G6Q0	Salmonella_phage	3.3e-14	92.3
AVJ81550.1\|3122363_3122666_-	mu-like prophage FluMu gp41 family protein	A0A1S6KZZ9	Salmonella_phage	3.7e-41	91.0
AVJ81551.1\|3122720_3123236_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	7.6e-87	93.0
AVJ81552.1\|3123245_3124418_-\|tail	phage tail sheath family protein	A0A1S6KZY7	Salmonella_phage	6.6e-211	93.6
AVJ81553.1\|3124551_3124974_-\|tail	caudovirales tail fiber assembly family protein	A0A1B0V844	Salmonella_phage	3.8e-28	51.5
AVJ81554.1\|3124976_3127223_-\|tail	phage tail-collar fiber family protein	A0A1B0V7G4	Salmonella_phage	2.3e-164	54.9
AVJ81555.1\|3127219_3127825_-\|tail	phage tail protein I	E5G6N9	Salmonella_phage	3.1e-111	94.0
AVJ81556.1\|3127817_3128726_-\|plate	baseplate J-like family protein	A0A1S6KZY6	Salmonella_phage	5.4e-152	95.7
AVJ81557.1\|3128712_3129072_-	lysozyme family protein	A0A1S6KZZ4	Salmonella_phage	8.3e-56	93.3
AVJ81558.1\|3129068_3129647_-\|plate	phage baseplate assembly V family protein	E5G6N6	Salmonella_phage	4.8e-106	96.9
AVJ81559.1\|3129715_3130144_-	phage virion morphogenesis protein	E5G6N4	Salmonella_phage	9.8e-64	90.7
AVJ81560.1\|3130154_3130586_-\|tail	P2 phage tail completion R family protein	A0A1S6KZY0	Salmonella_phage	1.3e-68	88.8
AVJ81561.1\|3130681_3131110_-\|lysis	phage lysis regulatory, LysB family protein	A0A1S6KZX8	Salmonella_phage	1.2e-56	84.3
AVJ81562.1\|3131106_3131622_-	phage lysozyme family protein	E5G6N1	Salmonella_phage	2.4e-72	75.9
AVJ81563.1\|3131602_3131818_-	putative membrane protein	E5G6N0	Salmonella_phage	2.0e-20	66.2
AVJ81564.1\|3131821_3132025_-	phage Tail Protein X family protein	E5G6M9	Salmonella_phage	3.8e-34	100.0
AVJ81565.1\|3132024_3132492_-\|head	phage head completion family protein	A0A1S6KZW8	Salmonella_phage	1.3e-48	58.7
AVJ81566.1\|3132590_3133244_-\|terminase	phage small terminase subunit	E5G6M7	Salmonella_phage	5.2e-56	56.1
AVJ81567.1\|3133247_3134396_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	2.7e-132	68.5
AVJ81568.1\|3134411_3135239_-\|capsid	phage capsid scaffolding (GPO) serine peptidase family protein	A0A1S6KZW9	Salmonella_phage	1.7e-72	66.2
AVJ81569.1\|3135433_3137152_+\|terminase	ATPase subunit of terminase family protein	E5G6M4	Salmonella_phage	5.7e-304	87.1
AVJ81570.1\|3137151_3138201_+\|portal	phage portal protein, PBSX family	E5G6M3	Salmonella_phage	4.2e-156	79.1
AVJ81571.1\|3138338_3138464_-	hypothetical protein	NA	NA	NA	NA
AVJ81572.1\|3138602_3138863_-	hypothetical protein	J9Q7T5	Salmonella_phage	4.0e-20	59.0
AVJ81573.1\|3138936_3139170_-	dinI-like family protein	A0A1S6L014	Salmonella_phage	3.2e-32	89.6
AVJ81574.1\|3139180_3139369_-	putative levan regulatory protein	A0A1S6L006	Salmonella_phage	3.7e-23	90.0
AVJ81575.1\|3139765_3140773_+	D12 class N6 adenine-specific DNA methyltransferase family protein	M1HZJ7	Paramecium_bursaria_Chlorella_virus	6.0e-11	29.9
AVJ81576.1\|3140774_3141794_-	hypothetical protein	NA	NA	NA	NA
AVJ81577.1\|3141797_3142913_-	parB-like nuclease domain protein	Q858T2	Yersinia_virus	1.7e-19	25.7
AVJ81578.1\|3142928_3143060_-	hypothetical protein	NA	NA	NA	NA
AVJ81579.1\|3143202_3145437_-	bacteriophage replication protein A	A0A0M4RTM8	Salmonella_phage	1.2e-242	58.9
AVJ81580.1\|3145429_3146326_-	DNA adenine methylase family protein	E5G6L8	Salmonella_phage	4.1e-104	66.4
AVJ81581.1\|3146322_3146550_-	phage/conjugal plasmid C-4 type zinc finger, TraR family protein	E5G6L7	Salmonella_phage	5.4e-29	80.0
AVJ81582.1\|3146549_3146783_-	hypothetical protein	A0A1S6L021	Salmonella_phage	8.1e-20	67.5
AVJ81583.1\|3146886_3147036_-	hypothetical protein	S4TRP5	Salmonella_phage	2.2e-07	68.1
AVJ81584.1\|3147035_3147461_-	tellurite resistance TerB family protein	Q71TK7	Escherichia_phage	8.6e-60	84.4
AVJ81585.1\|3147530_3147731_-	protein dhr	A0A0M5M7U3	Salmonella_phage	3.0e-23	73.8
AVJ81586.1\|3147720_3147945_-	protein fil	A0A0M4RTI3	Salmonella_phage	1.9e-26	78.4
AVJ81587.1\|3147952_3148462_-	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.8e-80	88.8
AVJ81588.1\|3148496_3148733_-	hypothetical protein	NA	NA	NA	NA
AVJ81589.1\|3149254_3149449_+	hypothetical protein	A0A0M4RE65	Salmonella_phage	2.2e-07	43.9
AVJ81590.1\|3149460_3150360_+	putative nAD-dependent DNA ligase	NA	NA	NA	NA
AVJ81591.1\|3150369_3151383_+\|integrase	phage integrase family protein	F1BUS9	Erwinia_phage	4.8e-117	60.2
AVJ81592.1\|3151703_3152045_-	toxin YkfI	NA	NA	NA	NA
3151496:3151545	attR	NA	NA	NA	NA
AVJ81593.1\|3152065_3152383_-	antitoxin YafW	NA	NA	NA	NA
AVJ81594.1\|3152400_3152622_-	hypothetical protein	NA	NA	NA	NA
AVJ81595.1\|3152630_3153107_-	hypothetical protein	NA	NA	NA	NA
AVJ81596.1\|3153122_3153602_-	intergenic-region protein	A9J566	Pseudomonas_phage	1.4e-13	30.5
AVJ81597.1\|3153737_3153884_-	hypothetical protein	NA	NA	NA	NA
AVJ81598.1\|3154455_3156651_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
AVJ81599.1\|3156647_3157943_-	hypothetical protein	NA	NA	NA	NA
AVJ81600.1\|3157967_3159920_-	tellurite resistance TerB family protein	NA	NA	NA	NA
AVJ81601.1\|3159983_3160838_-	DDE domain protein	U5P429	Shigella_phage	8.0e-49	41.9
AVJ81602.1\|3160834_3161134_-\|transposase	transposase family protein	NA	NA	NA	NA

DBSCAN-SWA_10

3359955 : 3413199

uncultured_Caudovirales_phage(87.5%)

integrase,tail,capsid,portal,head,protease,terminase

attL 3394123:3394143|attR 3410467:3410487

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVJ81802.1\|3359955_3361323_+\|protease	periplasmic pH-dependent serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	5.1e-21	26.4
AVJ81803.1\|3361415_3362483_+	periplasmic serine peptidase DegS	NA	NA	NA	NA
AVJ81804.1\|3362534_3363473_-	malate dehydrogenase, NAD-dependent	NA	NA	NA	NA
AVJ81805.1\|3363900_3364341_+	arginine repressor	NA	NA	NA	NA
AVJ81806.1\|3364719_3364983_+	hypothetical protein	NA	NA	NA	NA
AVJ81807.1\|3365042_3365315_-	hypothetical protein	NA	NA	NA	NA
AVJ81808.1\|3365360_3366815_-	succinate-semialdehyde dehydrogenase family protein	NA	NA	NA	NA
AVJ81809.1\|3366901_3368869_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
AVJ81810.1\|3368874_3369807_-	efflux transporter, RND family, MFP subunit	NA	NA	NA	NA
AVJ81811.1\|3369814_3370018_-	hypothetical protein	NA	NA	NA	NA
AVJ81812.1\|3370214_3371123_+	lysR substrate binding domain protein	NA	NA	NA	NA
AVJ81813.1\|3371235_3372681_-	modulator of DNA gyrase family protein	NA	NA	NA	NA
AVJ81814.1\|3372764_3376571_-	asmA-like C-terminal region family protein	NA	NA	NA	NA
AVJ81815.1\|3376613_3378083_-	ribonuclease, Rne/Rng family domain protein	NA	NA	NA	NA
AVJ81816.1\|3378072_3378666_-	septum formation protein Maf	NA	NA	NA	NA
AVJ81817.1\|3378675_3379164_-	rod shape-determining protein MreD	NA	NA	NA	NA
AVJ81818.1\|3379163_3380180_-	rod shape-determining protein MreC	NA	NA	NA	NA
AVJ81819.1\|3380242_3381286_-	rod shape-determining protein MreB	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
AVJ81820.1\|3381568_3383509_-	RNase E specificity factor CsrD	NA	NA	NA	NA
AVJ81821.1\|3383692_3384667_+	putative acrylyl-CoA reductase AcuI	NA	NA	NA	NA
AVJ81822.1\|3384744_3385746_+	oxidoreductase molybdopterin binding domain protein	NA	NA	NA	NA
AVJ81823.1\|3385746_3386346_+	ferric reductase like transmembrane component family protein	NA	NA	NA	NA
AVJ81824.1\|3386580_3387033_+	3-dehydroquinate dehydratase, type II	NA	NA	NA	NA
AVJ81825.1\|3387054_3387516_+	acetyl-CoA carboxylase, biotin carboxyl carrier protein	NA	NA	NA	NA
AVJ81826.1\|3387526_3388876_+	acetyl-CoA carboxylase, biotin carboxylase subunit	NA	NA	NA	NA
AVJ81827.1\|3388984_3389227_+	hypothetical protein	NA	NA	NA	NA
AVJ81828.1\|3389216_3390668_+	sodium/pantothenate symporter	NA	NA	NA	NA
AVJ81829.1\|3390679_3391561_+	ribosomal protein L11 methyltransferase	NA	NA	NA	NA
AVJ81830.1\|3391698_3392439_+	eukaryotic-type carbonic anhydrase family protein	NA	NA	NA	NA
AVJ81831.1\|3392768_3393734_+	TIM-barrel, nifR3 family protein	NA	NA	NA	NA
AVJ81832.1\|3393757_3394054_+	bacterial regulatory, Fis family protein	NA	NA	NA	NA
3394123:3394143	attL	NA	NA	NA	NA
AVJ81833.1\|3394183_3397648_-\|tail	phage tail tape measure protein, lambda family	A0A2H4JHR1	uncultured_Caudovirales_phage	0.0e+00	100.0
AVJ81834.1\|3397661_3399323_-	phage Terminase family protein	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	100.0
AVJ81835.1\|3399306_3399663_-\|terminase	phage terminase, small subunit, P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	2.5e-60	100.0
AVJ81836.1\|3399620_3399812_-\|terminase	phage terminase, small subunit, P27 family	A0A2H4JB90	uncultured_Caudovirales_phage	4.6e-05	95.7
AVJ81837.1\|3399793_3399946_-	hypothetical protein	A0A2H4JCY9	uncultured_Caudovirales_phage	2.4e-20	100.0
AVJ81838.1\|3399938_3400331_-	HNH endonuclease family protein	A0A2H4JAS8	uncultured_Caudovirales_phage	6.2e-73	99.2
AVJ81839.1\|3400381_3400675_-\|head,tail	phage gp6-like head-tail connector family protein	A0A2H4JD08	uncultured_Caudovirales_phage	5.5e-50	100.0
AVJ81840.1\|3400671_3401010_-\|head,tail	putative head-tail adaptor	A0A2H4JHK5	uncultured_Caudovirales_phage	2.9e-58	100.0
AVJ81841.1\|3401006_3402242_-\|portal	phage portal protein, HK97 family	A0A2H4JFJ9	uncultured_Caudovirales_phage	7.6e-242	100.0
AVJ81842.1\|3402243_3402804_-\|head,protease	phage prohead protease, HK97 family	A0A2H4JB68	uncultured_Caudovirales_phage	7.0e-102	100.0
AVJ81843.1\|3402855_3404022_-\|capsid	phage major capsid protein, HK97 family	A0A2H4JED2	uncultured_Caudovirales_phage	6.1e-217	100.0
AVJ81844.1\|3404253_3404553_-	hypothetical protein	A0A2H4JB54	uncultured_Caudovirales_phage	1.1e-48	100.0
AVJ81845.1\|3404565_3404820_-	hypothetical protein	A0A2H4JEE4	uncultured_Caudovirales_phage	1.9e-38	100.0
AVJ81846.1\|3405042_3406407_-	AAA domain protein	A0A2H4JFA4	uncultured_Caudovirales_phage	7.1e-265	100.0
AVJ81847.1\|3406403_3406772_-	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	4.6e-62	100.0
AVJ81848.1\|3406768_3406996_-	hypothetical protein	A0A2H4JBA1	uncultured_Caudovirales_phage	1.6e-33	100.0
AVJ81849.1\|3406988_3407174_-	hypothetical protein	A0A2H4JFH8	uncultured_Caudovirales_phage	1.9e-24	100.0
AVJ81850.1\|3407166_3407436_-	hypothetical protein	A0A2H4JGW3	uncultured_Caudovirales_phage	6.2e-48	100.0
AVJ81851.1\|3408103_3408313_-	prophage CP4-57 regulatory family protein	A0A2H4JB58	uncultured_Caudovirales_phage	9.7e-33	100.0
AVJ81852.1\|3408407_3409220_-	hypothetical protein	A0A2H4JEC4	uncultured_Caudovirales_phage	6.7e-154	100.0
AVJ81853.1\|3409216_3410440_-\|integrase	phage integrase family protein	A0A2H4JB45	uncultured_Caudovirales_phage	2.3e-243	100.0
AVJ81854.1\|3410810_3410975_+	hypothetical protein	NA	NA	NA	NA
3410467:3410487	attR	NA	NA	NA	NA
AVJ81855.1\|3411114_3413199_+	diguanylate cyclase domain protein	G3MA91	Bacillus_virus	9.2e-22	34.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP027145

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

35090 : 41383

uncultured_Caudovirales_phage(83.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVJ83690.1\|35090_35444_+	bacterial regulatory, arsR family protein	A0A2H4J145	uncultured_Caudovirales_phage	5.9e-22	47.2
AVJ83681.1\|35501_35981_+	low molecular weight phosphotyrosine phosphatase family protein	A0A2H4J8A6	uncultured_Caudovirales_phage	7.7e-33	49.4
AVJ83672.1\|36081_36369_+	arsenical resistance operon trans-acting repressor ArsD	NA	NA	NA	NA
AVJ83579.1\|37622_38327_-\|transposase	transposase IS66 family protein	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVJ83598.1\|38317_38986_+	anion-transporting ATPase family protein	NA	NA	NA	NA
AVJ83660.1\|39026_40316_+	arsenite/antimonite efflux pump membrane family protein	A0A2H4J144	uncultured_Caudovirales_phage	7.3e-171	72.3
AVJ83595.1\|40373_40802_+	arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	4.3e-51	72.1
AVJ83581.1\|40873_41383_+	low molecular weight phosphotyrosine phosphatase family protein	A0A2H4J437	uncultured_Caudovirales_phage	8.5e-14	37.1

DBSCAN-SWA_2

50035 : 56996

uncultured_Caudovirales_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVJ83619.1\|50035_50758_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	8.7e-97	72.2
AVJ83572.1\|50978_51239_-	crcB-like family protein	A0A2H4J148	uncultured_Caudovirales_phage	8.4e-18	55.8
AVJ83576.1\|51440_52730_-	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	1.5e-123	54.7
AVJ83656.1\|52746_53172_-	putative universal stress protein A	NA	NA	NA	NA
AVJ83667.1\|53168_53396_-	DHHA2 domain protein	NA	NA	NA	NA
AVJ83612.1\|53429_53597_+	hypothetical protein	NA	NA	NA	NA
AVJ83675.1\|53643_54348_+\|transposase	transposase IS66 family protein	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVJ83643.1\|54421_54829_+	resolvase, N terminal domain protein	A0A219YA40	Aeromonas_phage	8.9e-14	36.3
AVJ83587.1\|55013_55571_+	osmC-like family protein	NA	NA	NA	NA
AVJ83577.1\|55721_56294_+	bacterial regulatory, tetR family protein	NA	NA	NA	NA
AVJ83651.1\|56298_56637_+	alkylhydroperoxidase AhpD family core domain protein	NA	NA	NA	NA
AVJ83668.1\|56666_56996_-	thioredoxin-like domain protein	V9SJ74	Achromobacter_phage	9.7e-11	34.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP027144

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4079 : 97642

Escherichia_phage(24.24%)

integrase,transposase

attL 20205:20264|attR 105790:105804

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVJ83263.1\|4079_5003_+\|transposase	transposase DDE domain protein	Q9MCT5	Escherichia_phage	3.8e-177	99.7
AVJ83262.1\|5326_5449_+	putative membrane protein	NA	NA	NA	NA
AVJ83359.1\|5548_7015_+	hypothetical protein	NA	NA	NA	NA
AVJ83405.1\|7264_7504_+	hypothetical protein	NA	NA	NA	NA
AVJ83320.1\|7698_7878_+	hypothetical protein	NA	NA	NA	NA
AVJ83490.1\|8392_8560_-	hypothetical protein	NA	NA	NA	NA
AVJ83541.1\|8584_9289_+\|transposase	transposase IS66 family protein	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVJ83459.1\|9953_10658_+	resolvase, N terminal domain protein	NA	NA	NA	NA
AVJ83379.1\|10654_10879_+	hypothetical protein	NA	NA	NA	NA
AVJ83521.1\|11089_12583_+\|transposase	transposase family protein	NA	NA	NA	NA
AVJ83279.1\|12758_13061_-	phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I family protein	NA	NA	NA	NA
AVJ83331.1\|13147_13963_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
AVJ83367.1\|14650_15655_-\|transposase	transposase family protein	NA	NA	NA	NA
AVJ83512.1\|15733_18700_-	hypothetical protein	A0A1B0V7H9	Salmonella_phage	0.0e+00	72.9
AVJ83274.1\|18820_19525_-\|transposase	transposase IS66 family protein	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVJ83386.1\|19708_19927_+	hypothetical protein	NA	NA	NA	NA
20205:20264	attL	NA	NA	NA	NA
AVJ83318.1\|20228_21068_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
20205:20264	attL	NA	NA	NA	NA
AVJ83413.1\|21591_22722_-	erythromycin esterase family protein	NA	NA	NA	NA
AVJ83467.1\|23103_23241_-	putative membrane protein	NA	NA	NA	NA
AVJ83371.1\|23512_23800_-	rifampin ADP-ribosyl transferase	NA	NA	NA	NA
AVJ83429.1\|23850_24033_-	hypothetical protein	NA	NA	NA	NA
AVJ83329.1\|24053_24863_-	aminoglycoside 3-N-acetyltransferase family protein	O64018	Bacillus_phage	1.2e-17	29.3
AVJ83454.1\|25104_26460_-\|transposase	transposase DDE domain group 1 family protein	A0A1X9I6F6	Streptococcus_phage	2.2e-45	29.7
AVJ83395.1\|26825_26951_-	hypothetical protein	NA	NA	NA	NA
AVJ83292.1\|27691_28705_+\|integrase	integron integrase family protein	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AVJ83307.1\|29497_30202_-\|transposase	transposase IS66 family protein	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVJ83507.1\|30178_30328_+\|transposase	putative transposase	NA	NA	NA	NA
AVJ83399.1\|31002_31194_-	hypothetical protein	NA	NA	NA	NA
AVJ83364.1\|31285_31438_-	hypothetical protein	NA	NA	NA	NA
AVJ83465.1\|31488_31605_-	hypothetical protein	NA	NA	NA	NA
AVJ83400.1\|32613_32868_+	hypothetical protein	NA	NA	NA	NA
AVJ83338.1\|32870_34910_-	description family protein	E3T5J8	Cafeteria_roenbergensis_virus	1.7e-25	25.3
AVJ83342.1\|34906_35893_-	hypothetical protein	NA	NA	NA	NA
AVJ83556.1\|36813_37206_+	hypothetical protein	NA	NA	NA	NA
AVJ83372.1\|38723_39221_+	hypothetical protein	NA	NA	NA	NA
AVJ83463.1\|39225_40614_+	hypothetical protein	NA	NA	NA	NA
AVJ83410.1\|41011_41308_+	helix-turn-helix family protein	NA	NA	NA	NA
AVJ83348.1\|41312_42398_+	hipA N-terminal domain protein	NA	NA	NA	NA
AVJ83441.1\|42687_42894_+	hypothetical protein	NA	NA	NA	NA
AVJ83510.1\|42994_43405_+	hypothetical protein	NA	NA	NA	NA
AVJ83343.1\|43459_44233_+	HNH endonuclease family protein	G0X580	Salmonella_phage	2.4e-15	37.2
AVJ83504.1\|44485_44911_+	hypothetical protein	NA	NA	NA	NA
AVJ83494.1\|45510_45768_+	hypothetical protein	NA	NA	NA	NA
AVJ83284.1\|45789_46641_+	HNH endonuclease family protein	G0X580	Salmonella_phage	3.9e-11	34.2
AVJ83366.1\|47247_47652_-	H-NS-like protein Sfh	NA	NA	NA	NA
AVJ83290.1\|47829_47943_-	putative membrane protein	NA	NA	NA	NA
AVJ83354.1\|49156_50137_-	hypothetical protein	A0A077SK28	Escherichia_phage	1.8e-185	99.1
AVJ83557.1\|50863_51205_-	hypothetical protein	NA	NA	NA	NA
AVJ83339.1\|52205_53141_-\|transposase	tn3 transposase DDE domain protein	Q1MVP5	Enterobacteria_phage	4.1e-139	79.1
AVJ83545.1\|53155_55213_-	hypothetical protein	Q1MVP5	Enterobacteria_phage	7.7e-223	57.5
AVJ83444.1\|55401_56106_-\|transposase	transposase IS66 family protein	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVJ83468.1\|56082_56232_+	P12 domain protein	NA	NA	NA	NA
AVJ83397.1\|56364_56613_+	addiction module toxin, RelE/StbE family protein	NA	NA	NA	NA
AVJ83357.1\|56739_57315_+	resolvase, N terminal domain protein	A0A0A7NPV4	Enterobacteria_phage	5.6e-46	52.7
AVJ83439.1\|57657_58506_-\|integrase	integron integrase family protein	A0A1P8DJJ6	Virus_Rctr41k	2.6e-68	49.3
AVJ83404.1\|58816_59608_+	nucleotidyltransferase domain protein	NA	NA	NA	NA
AVJ83349.1\|60112_60952_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AVJ83548.1\|61356_62898_+\|transposase	transposase family protein	NA	NA	NA	NA
60917:62232	attR	NA	NA	NA	NA
AVJ83295.1\|63235_63664_+	BRCA1 C Terminus domain protein	A0A1V0SB21	Catovirus	4.1e-09	34.1
60917:62232	attR	NA	NA	NA	NA
AVJ83344.1\|64096_64849_+	hypothetical protein	NA	NA	NA	NA
AVJ83449.1\|64835_65684_-\|integrase	integron integrase family protein	A0A1P8DJJ6	Virus_Rctr41k	2.6e-68	49.3
AVJ83482.1\|66006_66810_+	phosphotransferase enzyme family protein	NA	NA	NA	NA
AVJ83536.1\|67016_67646_+	aminoglycoside/hydroxyurea antibiotic resistance kinase family protein	NA	NA	NA	NA
AVJ83360.1\|67826_68618_+	sprT-like family protein	NA	NA	NA	NA
AVJ83356.1\|68632_68974_-	putative ardK protein	NA	NA	NA	NA
AVJ83376.1\|69429_70134_-\|transposase	transposase IS66 family protein	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVJ83493.1\|70158_70299_+	hypothetical protein	NA	NA	NA	NA
AVJ83445.1\|70299_70776_-	cupin fold metallo, WbuC family protein	NA	NA	NA	NA
AVJ83265.1\|70852_72472_-	hypothetical protein	NA	NA	NA	NA
AVJ83489.1\|72660_73584_-\|transposase	transposase DDE domain protein	Q9MCT5	Escherichia_phage	2.4e-176	99.3
AVJ83442.1\|73667_75014_+	heavy metal sensor kinase family protein	W8CYF6	Bacillus_phage	8.8e-18	26.6
AVJ83321.1\|75231_75666_+	putative copper-binding protein PcoE	NA	NA	NA	NA
AVJ83270.1\|75923_77039_-	description family protein	NA	NA	NA	NA
AVJ83298.1\|77161_77434_+	transcriptional repressor RcnR	NA	NA	NA	NA
AVJ83506.1\|77899_78718_+	methyltransferase domain protein	NA	NA	NA	NA
AVJ83304.1\|78714_79920_+	putative aTP/GTP-binding protein	NA	NA	NA	NA
AVJ83469.1\|80199_81519_-	hypothetical protein	NA	NA	NA	NA
AVJ83505.1\|81769_83155_-	DNA (cytosine-5-)-methyltransferase family protein	E5E3X6	Burkholderia_phage	3.3e-100	52.3
AVJ83389.1\|83845_84826_+	hypothetical protein	NA	NA	NA	NA
AVJ83523.1\|86472_86703_+	hypothetical protein	NA	NA	NA	NA
AVJ83327.1\|86843_87119_+	hypothetical protein	NA	NA	NA	NA
AVJ83259.1\|87613_89089_+	sulfate transporter family protein	A0A2H4J153	uncultured_Caudovirales_phage	3.3e-199	74.6
AVJ83464.1\|89107_89935_+	universal stress family protein	A0A2H4J154	uncultured_Caudovirales_phage	4.9e-43	37.2
AVJ83420.1\|89994_90420_-	arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.6e-50	70.7
AVJ83486.1\|90432_91722_-	arsenite/antimonite efflux pump membrane family protein	A0A2H4J144	uncultured_Caudovirales_phage	9.9e-168	71.4
AVJ83272.1\|91767_92088_-	bacterial regulatory, arsR family protein	A0A2H4J145	uncultured_Caudovirales_phage	1.7e-20	53.7
AVJ83299.1\|92174_92879_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	8.8e-86	72.9
AVJ83487.1\|92911_94315_-\|integrase	integrase core domain protein	NA	NA	NA	NA
AVJ83308.1\|94534_95458_-\|transposase	transposase DDE domain protein	Q1MVF0	Enterobacteria_phage	4.6e-175	98.7
AVJ83485.1\|95577_96210_+	hypothetical protein	NA	NA	NA	NA
AVJ83380.1\|96238_97642_-\|integrase	integrase core domain protein	NA	NA	NA	NA
105790:105804	attR	NA	NA	NA	NA

DBSCAN-SWA_2

155058 : 217579

Escherichia_phage(21.43%)

transposase,integrase

attL 194762:194777|attR 213827:214629

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVJ83460.1\|155058_156129_-\|integrase	phage integrase family protein	NA	NA	NA	NA
AVJ83347.1\|156127_157627_+	hypothetical protein	F1C5A5	Cronobacter_phage	1.0e-91	44.9
AVJ83530.1\|157672_158482_-	DSBA-like thioredoxin domain protein	NA	NA	NA	NA
AVJ83558.1\|158744_159200_+	hypothetical protein	NA	NA	NA	NA
AVJ83475.1\|159259_159520_-	hypothetical protein	NA	NA	NA	NA
AVJ83310.1\|160132_160882_-	thioredoxin-like domain protein	NA	NA	NA	NA
AVJ83291.1\|161029_161569_+	transglycosylase SLT domain protein	NA	NA	NA	NA
AVJ83314.1\|162332_163394_+	HNH endonuclease family protein	NA	NA	NA	NA
AVJ83415.1\|164032_167983_-	putative traG protein	NA	NA	NA	NA
AVJ83407.1\|167991_169407_-	conjugative relaxosome accessory transposon family protein	NA	NA	NA	NA
AVJ83433.1\|169396_170443_-	F plasmid transfer operon family protein	NA	NA	NA	NA
AVJ83551.1\|171548_172349_-	putative trhR	NA	NA	NA	NA
AVJ83374.1\|173590_174328_+	hypothetical protein	NA	NA	NA	NA
AVJ83281.1\|174337_177484_+	helicase family protein	NA	NA	NA	NA
AVJ83346.1\|177483_179568_+	conjugative coupling factor TraD, SXT/TOL subfamily protein	NA	NA	NA	NA
AVJ83480.1\|179567_180677_+	hypothetical protein	NA	NA	NA	NA
AVJ83552.1\|181336_182518_+	peptidase S49 family protein	B8QTU8	Erwinia_phage	7.5e-13	29.2
AVJ83447.1\|182519_183251_+	nuclease-related domain protein	NA	NA	NA	NA
AVJ83384.1\|183277_183400_+	putative membrane protein	NA	NA	NA	NA
AVJ83365.1\|183956_184241_-	hypothetical protein	NA	NA	NA	NA
AVJ83280.1\|184692_184812_-	hypothetical protein	NA	NA	NA	NA
AVJ83301.1\|185329_185446_-	hypothetical protein	NA	NA	NA	NA
AVJ83369.1\|185923_186460_-	hypothetical protein	NA	NA	NA	NA
AVJ83528.1\|186527_186965_-	hypothetical protein	NA	NA	NA	NA
AVJ83377.1\|187009_187306_-	hypothetical protein	NA	NA	NA	NA
AVJ83332.1\|187440_188106_-	hypothetical protein	NA	NA	NA	NA
AVJ83324.1\|188456_188738_-	hypothetical protein	NA	NA	NA	NA
AVJ83283.1\|188803_189988_-	putative parB-like protein	NA	NA	NA	NA
AVJ83553.1\|190404_190581_-	hypothetical protein	NA	NA	NA	NA
AVJ83451.1\|191091_192036_+	hypothetical protein	NA	NA	NA	NA
AVJ83539.1\|192131_192734_+	hypothetical protein	A0A1V0E5L6	Salmonella_phage	1.7e-08	42.6
AVJ83540.1\|192787_193144_+	hypothetical protein	NA	NA	NA	NA
AVJ83483.1\|193759_193996_+	hypothetical protein	NA	NA	NA	NA
194762:194777	attL	NA	NA	NA	NA
AVJ83361.1\|195121_195361_-	antitoxin RelB	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
194762:194777	attL	NA	NA	NA	NA
AVJ83430.1\|195623_196547_-	cation diffusion facilitator transporter family protein	NA	NA	NA	NA
AVJ83278.1\|197794_199033_-\|transposase	transposase family protein	A0A0U3ULR1	Bacillus_phage	2.5e-11	23.1
AVJ83550.1\|199454_200774_-\|integrase	integrase core domain protein	NA	NA	NA	NA
AVJ83412.1\|200969_201821_-	DDE domain protein	A0A2I6AZV9	Macacine_betaherpesvirus	5.8e-108	95.5
200870:200885	attR	NA	NA	NA	NA
AVJ83458.1\|201817_202339_-\|transposase	transposase family protein	A0A2I6AZV8	Macacine_betaherpesvirus	2.9e-86	94.2
200870:200885	attR	NA	NA	NA	NA
AVJ83417.1\|202671_202902_-	hypothetical protein	NA	NA	NA	NA
AVJ83330.1\|203493_203775_-	hypothetical protein	NA	NA	NA	NA
AVJ83479.1\|203920_204097_-	hypothetical protein	NA	NA	NA	NA
AVJ83333.1\|204150_204462_-	hypothetical protein	NA	NA	NA	NA
AVJ83350.1\|204924_205149_-	hypothetical protein	NA	NA	NA	NA
AVJ83418.1\|205203_205407_-	putative membrane protein	NA	NA	NA	NA
AVJ83285.1\|205959_206430_-	hypothetical protein	NA	NA	NA	NA
AVJ83555.1\|206455_206767_-	hypothetical protein	NA	NA	NA	NA
AVJ83401.1\|207782_208010_-	hypothetical protein	NA	NA	NA	NA
AVJ83549.1\|208184_209075_-	putative klaC	NA	NA	NA	NA
AVJ83297.1\|209067_209268_-	toxic anion resistance family protein	NA	NA	NA	NA
AVJ83293.1\|209273_209411_-\|transposase	putative transposase	NA	NA	NA	NA
AVJ83311.1\|209387_210092_+\|transposase	transposase IS66 family protein	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVJ83432.1\|210236_211760_+	HTH domain protein	A0A2L1IVA1	Escherichia_phage	1.5e-26	32.4
AVJ83336.1\|211746_212487_+	istB-like ATP binding family protein	U5N3V8	Enterobacteria_phage	4.4e-43	41.7
AVJ83322.1\|213445_213826_+\|integrase	phage integrase, N-terminal SAM-like domain protein	A0A1P8DJJ6	Virus_Rctr41k	1.3e-06	32.4
AVJ83461.1\|213872_214577_+\|transposase	transposase IS66 family protein	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVJ83317.1\|214686_215928_-	bacterial stress family protein	NA	NA	NA	NA
AVJ83501.1\|216356_216932_-	bacterial stress family protein	K4JRX3	Caulobacter_phage	8.7e-31	41.6
AVJ83492.1\|217000_217579_-	bacterial stress family protein	A0A2P1N0L4	Streptomyces_phage	2.5e-06	40.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP027143

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP027142

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP027145

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. CP027144

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection