CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP027396	Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed3	0 crisprs	NA	0
CP027395	Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed1	0 crisprs	NA	1
CP027394	Escherichia coli O104:H4 strain FDAARGOS_349 chromosome, complete genome	0 crisprs	c2c9_V-U4,DEDDh,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,PrimPol	13
CP027392	Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed2, complete sequence	0 crisprs	NA	2
CP027393	Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed4	0 crisprs	NA	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

53039 : 63337

Salmonella_phage(22.22%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL34077.1\|53039_53915_-	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
AVL34078.1\|54170_55433_-\|transposase	IS1380 family transposase ISEc9	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
AVL34079.1\|55996_56554_+	recombinase	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
AVL34080.1\|56736_57597_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
AVL34140.1\|57865_58045_-	Par-like protein	NA	NA	NA	NA
AVL34081.1\|58164_58791_-	cobyrinic acid ac-diamide synthase	E5FFJ3	Burkholderia_phage	2.0e-17	31.1
AVL34082.1\|58994_60266_-	protein ImpB	F1C5A5	Cronobacter_phage	2.2e-143	60.4
AVL34083.1\|60265_60703_-	peptidase	A0A1W6JNS2	Morganella_phage	8.3e-26	48.4
AVL34142.1\|60699_60948_-	protein ImpC	Q2A098	Sodalis_phage	1.9e-14	48.0
AVL34143.1\|61059_61329_+	hypothetical protein	NA	NA	NA	NA
AVL34084.1\|61297_62269_+	DUF1281 domain-containing protein	NA	NA	NA	NA
AVL34085.1\|62653_63337_+	DNA methylase	A0A2I7RE86	Vibrio_phage	5.1e-30	37.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP027394

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

96701 : 158168

Enterobacteria_phage(44.9%)

integrase,tail,protease,capsid,portal,holin,terminase,lysis

attL 92517:92531|attR 113456:113470

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
92517:92531	attL	NA	NA	NA	NA
AVL28977.1\|96701_97832_-\|integrase	integrase	O21940	Phage_21	4.4e-103	51.4
AVL28978.1\|97809_98058_-	excisionase	NA	NA	NA	NA
AVL28979.1\|98122_100594_-	exonuclease	K7PLW7	Enterobacteria_phage	1.8e-56	59.2
AVL28980.1\|100686_100878_-	DUF1482 domain-containing protein	NA	NA	NA	NA
AVL28981.1\|100874_101063_-	cell division inhibition protein DicB	NA	NA	NA	NA
AVL33814.1\|101412_101628_+	hypothetical protein	NA	NA	NA	NA
AVL28982.1\|101557_101824_+	hypothetical protein	NA	NA	NA	NA
AVL33815.1\|101812_102151_-	hypothetical protein	A0A2R2Z306	Escherichia_phage	2.5e-06	51.0
AVL33816.1\|102162_102315_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	6.0e-08	55.3
AVL28983.1\|102611_103031_-	transcriptional regulator	A0A2I6PIE7	Escherichia_phage	4.2e-19	47.5
AVL28984.1\|103110_103365_+	hypothetical protein	A0A2I6PIE5	Escherichia_phage	2.8e-18	60.3
AVL28985.1\|103361_103787_+	Rha family transcriptional regulator	NA	NA	NA	NA
AVL33817.1\|103809_104772_+	DNA-binding protein	U5P0A0	Shigella_phage	2.1e-69	51.2
AVL28986.1\|104812_105238_+	hypothetical protein	A0A0U2QQN3	Escherichia_phage	1.3e-63	94.0
AVL28987.1\|105412_106078_+	hypothetical protein	NA	NA	NA	NA
AVL28988.1\|106258_106471_+	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	5.2e-26	90.0
AVL28989.1\|106512_106692_-	hypothetical protein	NA	NA	NA	NA
AVL28990.1\|106638_106911_+	hypothetical protein	I6PCV7	Cronobacter_phage	5.5e-12	49.2
AVL28991.1\|106912_107959_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	5.9e-110	55.0
AVL28992.1\|107971_108346_+	hypothetical protein	V5URS4	Shigella_phage	5.8e-36	63.6
AVL28993.1\|108342_109164_+	antitermination protein	K7P7B9	Enterobacteria_phage	8.5e-80	60.1
AVL28994.1\|109390_109588_+	TrmB family transcriptional regulator	Q9MC00	Enterobacteria_phage	1.4e-28	96.9
AVL28995.1\|109738_110788_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	8.8e-199	95.7
AVL28996.1\|111224_111551_+	hypothetical protein	NA	NA	NA	NA
AVL28997.1\|111998_112334_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	5.2e-44	74.8
AVL28998.1\|112594_114448_+	9-O-acetyl-N-acetylneuraminic acid deacetylase	Q08JA2	Stx2-converting_phage	0.0e+00	90.5
113456:113470	attR	NA	NA	NA	NA
AVL28999.1\|114598_114814_+\|holin	holin	G9L6J5	Escherichia_phage	9.0e-34	100.0
AVL29000.1\|114818_115625_+	hypothetical protein	Q08JA0	Stx2-converting_phage	3.3e-145	94.8
AVL29001.1\|115667_116201_+	lysozyme	Q6H9V6	Enterobacteria_phage	8.7e-102	97.2
AVL29002.1\|116278_116491_+	hypothetical protein	A0A0M4S639	Salmonella_phage	2.7e-06	60.5
AVL33818.1\|116755_116842_+	hypothetical protein	NA	NA	NA	NA
AVL29003.1\|116843_117311_+\|lysis	lysis protein	Q9AZ06	Salmonella_phage	2.6e-62	81.5
AVL29004.1\|117298_117451_+	hypothetical protein	K7PKL2	Enterobacteria_phage	2.8e-21	98.0
AVL29005.1\|117529_117817_+	hypothetical protein	A0A1P8DTP0	Salmonella_phage	4.0e-29	58.9
AVL29006.1\|117910_118135_+	hypothetical protein	NA	NA	NA	NA
AVL29007.1\|118270_118675_+	hypothetical protein	NA	NA	NA	NA
AVL33819.1\|118802_118994_+	DNA-packaging protein	NA	NA	NA	NA
AVL29008.1\|119075_119624_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.0e-57	84.2
AVL29009.1\|119553_121524_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.6e-262	67.5
AVL29010.1\|121507_121714_+\|tail	phage tail protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
AVL29011.1\|121710_123303_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	3.8e-185	61.1
AVL29012.1\|125237_126266_+\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	2.8e-112	60.4
AVL29013.1\|126317_126686_+	hypothetical protein	NA	NA	NA	NA
AVL29014.1\|126678_127032_+\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	3.0e-42	70.1
AVL29015.1\|127046_127622_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	9.2e-49	57.3
AVL29016.1\|127618_128014_+\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
AVL29017.1\|128021_128774_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	6.7e-132	97.6
AVL29018.1\|128787_129219_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	6.2e-42	68.8
AVL29019.1\|129245_129659_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
AVL29020.1\|129639_132213_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	83.9
AVL29021.1\|132209_132539_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
AVL29022.1\|132538_133237_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	3.4e-130	97.4
AVL29023.1\|133241_133985_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.8e-145	94.7
AVL29024.1\|133882_134524_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	8.6e-96	86.0
AVL29025.1\|134656_134842_-	hypothetical protein	NA	NA	NA	NA
AVL29026.1\|135002_138482_+	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	89.6
AVL29027.1\|138548_139148_+	Ail/Lom family protein	Q9EV15	Enterobacteria_phage	9.1e-108	97.0
AVL29028.1\|139299_142134_+\|tail	phage tail protein	X2KTY7	Enterobacteria_phage	5.7e-83	59.1
AVL29029.1\|142133_142718_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.7e-103	95.4
AVL29030.1\|142690_142828_+\|capsid	nucleocapsid protein	NA	NA	NA	NA
AVL33820.1\|142772_143399_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AVL29031.1\|143497_143767_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.7e-19	77.8
AVL29032.1\|144540_145047_-	ferritin-like domain-containing protein	NA	NA	NA	NA
AVL29033.1\|145092_145593_-	YciE/YciF family protein	NA	NA	NA	NA
AVL29034.1\|145678_145858_-	hypothetical protein	NA	NA	NA	NA
AVL29035.1\|146238_147045_-	tryptophan synthase subunit alpha	NA	NA	NA	NA
AVL29036.1\|147044_148238_-	tryptophan synthase subunit beta	NA	NA	NA	NA
AVL33821.1\|148249_149608_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	8.6e-37	40.7
AVL29037.1\|149611_151207_-	bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	3.8e-52	38.5
AVL29038.1\|151206_152769_-	anthranilate synthase component I	NA	NA	NA	NA
AVL33822.1\|152860_152905_-	trp operon leader peptide	NA	NA	NA	NA
AVL29039.1\|153042_153924_+	phosphatase	NA	NA	NA	NA
AVL29040.1\|153920_154541_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
AVL29041.1\|154641_155514_+	23S rRNA pseudouridylate synthase B	NA	NA	NA	NA
AVL29042.1\|155553_156144_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
AVL29043.1\|156140_156899_-	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	8.8e-07	23.4
AVL29044.1\|157118_158168_+\|protease	protease	A0A2H4UUF9	Bodo_saltans_virus	1.3e-21	31.5

DBSCAN-SWA_2

446016 : 512988

Escherichia_phage(43.42%)

integrase,tail,capsid,portal,holin,terminase,lysis,bacteriocin

attL 488479:488496|attR 516529:516546

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL29302.1\|446016_448443_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	2.3e-213	49.1
AVL33831.1\|448503_450927_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	9.8e-209	48.6
AVL29303.1\|450937_451051_+	dimethylsulfoxide reductase	A0A077SL61	Escherichia_phage	2.1e-05	72.0
AVL29304.1\|451458_452094_+	phage antirepressor Ant	A0A088CBR4	Shigella_phage	2.8e-91	81.0
AVL29305.1\|452141_452363_+	conjugal transfer protein TraR	V5USD3	Shigella_phage	2.9e-35	98.6
AVL29306.1\|452359_452644_+	DUF4752 domain-containing protein	A0A088CD82	Shigella_phage	6.1e-46	98.9
AVL29307.1\|452630_453467_+	hypothetical protein	A0A2I6TD51	Escherichia_phage	6.1e-126	87.7
AVL33832.1\|453696_453984_+	hypothetical protein	A0A0P0ZBM8	Stx2-converting_phage	9.5e-55	100.0
AVL29308.1\|453980_454484_+	DUF551 domain-containing protein	V5UT79	Shigella_phage	2.6e-95	98.2
AVL29309.1\|454485_454761_-	hypothetical protein	A0A088CD78	Shigella_phage	4.0e-18	89.3
AVL29310.1\|454884_463236_-	hypothetical protein	Q08J70	Stx2-converting_phage	0.0e+00	95.8
AVL29311.1\|463304_464570_-	hypothetical protein	A0A2L1IV65	Escherichia_phage	1.5e-192	95.0
AVL29312.1\|464580_464832_-\|bacteriocin	bacteriocin	A0A0P0ZDW9	Stx2-converting_phage	7.9e-13	97.5
AVL29313.1\|464841_465288_-	hypothetical protein	A0A2L1IV89	Escherichia_phage	4.0e-76	100.0
AVL29314.1\|465290_465947_-	hypothetical protein	A0A0H4IPM7	Shigella_phage	7.4e-103	99.1
AVL29315.1\|466038_466440_-	hypothetical protein	Q08J75	Stx2-converting_phage	5.0e-70	98.5
AVL29316.1\|466496_466637_-	Hok/Gef family protein	A0A2R2X2B4	Escherichia_phage	2.0e-18	97.8
AVL29317.1\|466716_466941_+	hypothetical protein	Q7Y2U2	Escherichia_phage	5.4e-21	78.8
AVL29318.1\|466871_467609_-	hypothetical protein	A0A2L1IV31	Escherichia_phage	1.2e-109	80.8
AVL29319.1\|467688_468306_-	hypothetical protein	A0A2L1IV83	Escherichia_phage	6.3e-120	98.0
AVL29320.1\|468311_468590_-	outer membrane protein	A0A2L1IV69	Escherichia_phage	2.6e-49	100.0
AVL29321.1\|468604_469873_-	host specificity protein J	A0A0N7C124	Escherichia_phage	1.6e-218	94.3
AVL29322.1\|469869_471495_-	hypothetical protein	A0A1I9LJT3	Stx_converting_phage	0.0e+00	96.7
AVL29323.1\|471835_472063_-	hypothetical protein	A0A088CBQ7	Shigella_phage	2.6e-39	98.7
AVL29324.1\|472075_472621_-	hypothetical protein	A0A088CD67	Shigella_phage	2.0e-93	99.4
AVL29325.1\|472703_474611_-\|tail	phage tail protein	V5USF3	Shigella_phage	4.2e-82	66.0
AVL29326.1\|474607_475258_-	hypothetical protein	A0A2L1IV63	Escherichia_phage	1.5e-119	99.1
AVL29327.1\|475257_475821_-	hypothetical protein	A0A2L1IV64	Escherichia_phage	8.3e-103	99.5
AVL29328.1\|475804_476266_-	hypothetical protein	A0A2L1IV43	Escherichia_phage	6.9e-71	99.3
AVL29329.1\|476316_476706_-	hypothetical protein	V5UT93	Shigella_phage	1.9e-61	97.7
AVL29330.1\|476760_477975_-\|capsid	N4-gp56 family major capsid protein	A0A2L1IV46	Escherichia_phage	1.8e-232	99.0
AVL29331.1\|477997_479005_-	hypothetical protein	A0A2L1IV47	Escherichia_phage	1.2e-168	93.4
AVL29332.1\|479162_481307_-\|portal	portal protein	A0A088CE71	Shigella_phage	0.0e+00	99.6
AVL29333.1\|481306_483013_-\|terminase	terminase	A0A2L1IV76	Escherichia_phage	0.0e+00	99.1
AVL29334.1\|482993_483809_-\|terminase	terminase	A0A2L1IV66	Escherichia_phage	6.6e-125	99.6
AVL33833.1\|484411_484993_+	histidine phosphatase family protein	A0A2L1IV13	Escherichia_phage	6.7e-47	100.0
AVL33834.1\|485126_485312_-\|lysis	lysis protein	A0A0P0ZDR7	Stx2-converting_phage	2.8e-23	96.7
AVL29335.1\|485533_485647_-	hypothetical protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
AVL29336.1\|485867_486401_-	lysozyme	A0A088CC28	Shigella_phage	5.6e-93	91.5
AVL29337.1\|486405_486621_-\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
AVL29338.1\|486697_486943_-	DUF826 domain-containing protein	S5MW40	Escherichia_phage	1.1e-14	87.7
AVL29339.1\|486968_487151_-	DUF1378 domain-containing protein	S5MBZ5	Escherichia_phage	1.6e-23	91.7
AVL29340.1\|487289_489200_-	DUF1737 domain-containing protein	A0A0N7CGH9	Escherichia_phage	6.4e-280	74.8
488479:488496	attL	NA	NA	NA	NA
AVL29341.1\|489731_489977_+	hypothetical protein	Q7Y2J1	Escherichia_phage	1.3e-31	93.8
AVL29342.1\|489965_490400_-	antitermination protein	G9L695	Escherichia_phage	2.4e-81	98.6
AVL29343.1\|490392_490587_-	protein ninH	A0A088CC23	Shigella_phage	1.4e-30	100.0
AVL29344.1\|490586_490949_-	hypothetical protein	A0A088CBJ1	Shigella_phage	9.2e-63	98.3
AVL29345.1\|490945_491236_-	DUF1364 domain-containing protein	A0A088CE53	Shigella_phage	9.3e-50	96.9
AVL29346.1\|491259_491451_-	NinE family protein	A0A0P0ZDL7	Stx2-converting_phage	8.9e-25	87.7
AVL29347.1\|491447_491858_-	recombination protein NinB	A0A088CBP6	Shigella_phage	3.9e-70	98.5
AVL29348.1\|491912_492584_-	hypothetical protein	A0A088CD42	Shigella_phage	9.0e-96	82.6
AVL29349.1\|493290_493608_+	transcriptional regulator	NA	NA	NA	NA
AVL29350.1\|493658_494144_-	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
AVL29351.1\|494162_494342_-	hypothetical protein	NA	NA	NA	NA
AVL29352.1\|494551_494764_-	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	8.4e-16	62.9
AVL29353.1\|494808_494964_+	hypothetical protein	Q7Y2Q9	Escherichia_phage	4.2e-09	81.1
AVL29354.1\|494952_495057_-	hypothetical protein	NA	NA	NA	NA
AVL29355.1\|495172_495757_-	DUF551 domain-containing protein	A0A0P0ZD75	Stx2-converting_phage	5.5e-33	83.5
AVL29356.1\|495813_496209_-	DUF977 domain-containing protein	A0A0U2QQN3	Escherichia_phage	2.0e-31	52.9
AVL29357.1\|496224_496995_-	DUF1627 domain-containing protein	A0A088CE47	Shigella_phage	8.1e-109	82.4
AVL29358.1\|497020_497761_-	DNA replication protein DnaC	A0A088CBP4	Shigella_phage	2.3e-121	87.4
AVL29359.1\|497767_498850_-	DNA-binding protein	V5URT9	Shigella_phage	2.8e-200	96.4
AVL29360.1\|498870_499089_-	hypothetical protein	A0A088CC17	Shigella_phage	1.1e-21	100.0
AVL29361.1\|499103_499400_-	hypothetical protein	A0A088CBI6	Shigella_phage	3.4e-47	98.0
AVL29362.1\|499538_499739_-	hypothetical protein	A4KWT7	Enterobacteria_phage	1.3e-29	97.0
AVL29363.1\|499839_500553_+	LexA family transcriptional repressor	A4KWV9	Enterobacteria_phage	4.1e-131	99.6
AVL29364.1\|500599_501142_+	hypothetical protein	NA	NA	NA	NA
AVL29365.1\|501129_501906_+	DUF1828 domain-containing protein	NA	NA	NA	NA
AVL29366.1\|502400_502784_+	antitermination protein	G9L671	Escherichia_phage	6.7e-64	99.2
AVL29367.1\|503195_503501_+	hypothetical protein	A0A088CC14	Shigella_phage	2.5e-45	98.0
AVL29368.1\|503532_503892_+	hypothetical protein	A0A088CBI5	Shigella_phage	2.3e-37	72.6
AVL29369.1\|503860_504070_-	hypothetical protein	NA	NA	NA	NA
AVL29370.1\|504526_504748_+	cell division protein FtsZ	A0A0U2RTC4	Escherichia_phage	1.1e-34	94.4
AVL29371.1\|504831_505218_+	hypothetical protein	V5USC5	Shigella_phage	9.5e-50	78.9
AVL29372.1\|505325_507398_+	exodeoxyribonuclease VIII	V5UQJ3	Shigella_phage	0.0e+00	87.4
AVL29373.1\|507394_507691_+	host-nuclease inhibitor protein Gam	V5URU8	Shigella_phage	5.8e-47	93.9
AVL29374.1\|507696_508482_+	phage recombination protein Bet	A0A088CBI3	Shigella_phage	9.4e-145	97.3
AVL29375.1\|508478_509159_+	exonuclease	A0A0P0ZBV6	Stx2-converting_phage	1.5e-130	98.2
AVL29376.1\|509206_509458_+	DUF4222 domain-containing protein	A0A088CBN9	Shigella_phage	1.3e-39	100.0
AVL29377.1\|509492_509864_+	DNA-binding protein	B9UDM0	Salmonella_phage	7.8e-41	74.8
AVL29378.1\|509719_510883_+\|integrase	site-specific integrase	A0A088CD23	Shigella_phage	3.8e-227	99.7
AVL29379.1\|510920_511475_+	dimethylsulfoxide reductase, chain B	A0A077SL61	Escherichia_phage	1.4e-62	57.7
AVL29380.1\|511476_512331_+	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
AVL29381.1\|512373_512988_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	8.7e-29	36.3
516529:516546	attR	NA	NA	NA	NA

DBSCAN-SWA_3

640393 : 698973

Enterobacteria_phage(79.17%)

integrase,tail,capsid,portal,tRNA,holin,terminase,transposase,plate

attL 636386:636402|attR 688593:688609

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
636386:636402	attL	NA	NA	NA	NA
AVL29503.1\|640393_641143_-	vitamin B12 import ATP-binding protein BtuD	A0A2R8FG22	Brazilian_cedratvirus	9.3e-09	28.2
AVL29504.1\|641142_641694_-	glutathione peroxidase	NA	NA	NA	NA
AVL29505.1\|641756_642737_-	vitamin B12 import system permease BtuC	NA	NA	NA	NA
AVL29506.1\|642926_643322_-	hypothetical protein	NA	NA	NA	NA
AVL29507.1\|643332_644268_-\|integrase	integrase	A0A0M4RTQ0	Salmonella_phage	4.8e-79	50.5
AVL29508.1\|644356_644668_-	XRE family transcriptional regulator	Q1JS45	Enterobacteria_phage	8.8e-22	55.9
AVL29509.1\|644759_645038_+	DNA-binding protein	NA	NA	NA	NA
AVL29510.1\|645052_645391_+	DUF4761 domain-containing protein	A0A0A7NV42	Enterobacteria_phage	2.2e-50	85.3
AVL29511.1\|645401_645689_+	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	2.7e-33	77.9
AVL29512.1\|645700_645943_+	DUF4754 domain-containing protein	A0A0A7NQ71	Enterobacteria_phage	2.3e-38	100.0
AVL29513.1\|646141_646462_+	hypothetical protein	NA	NA	NA	NA
AVL29514.1\|646451_646655_+	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	3.4e-30	94.0
AVL29515.1\|646651_646897_+	MarR family transcriptional regulator	A0A0A7NV47	Enterobacteria_phage	8.4e-36	87.7
AVL29516.1\|646893_647193_+	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	6.2e-41	88.9
AVL29517.1\|647515_647746_+	derepression protein	A0A0A7NV48	Enterobacteria_phage	5.0e-30	93.4
AVL29518.1\|647818_648208_+	inositol monophosphatase	NA	NA	NA	NA
AVL29519.1\|648204_651045_+	replication endonuclease	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	89.4
AVL29520.1\|651121_652081_+	recombinase	A0A0A7NPX4	Enterobacteria_phage	1.3e-180	99.4
AVL29521.1\|652085_652400_+	peptide transporter	A0A0A7NPT5	Enterobacteria_phage	3.5e-18	51.9
AVL29522.1\|652419_652851_+	hypothetical protein	A0A0A7NRY2	Enterobacteria_phage	4.7e-21	43.3
AVL29523.1\|652852_653116_+	hypothetical protein	A0A2P0P958	Salmonella_phage	1.1e-30	72.4
AVL33839.1\|653138_653483_-	hypothetical protein	NA	NA	NA	NA
AVL29524.1\|653627_654674_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	1.5e-206	100.0
AVL29525.1\|654673_656425_-	oxidoreductase	A0A0A7NV54	Enterobacteria_phage	0.0e+00	97.6
AVL29526.1\|656579_657416_+\|capsid	phage capsid protein	A0A0A7NRY7	Enterobacteria_phage	1.8e-149	99.3
AVL29527.1\|657439_658492_+\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	3.2e-188	94.3
AVL29528.1\|658537_659338_+\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	6.6e-130	91.4
AVL29529.1\|659439_659934_+\|capsid	capsid assembly protein	A0A0A7NPU2	Enterobacteria_phage	1.2e-89	99.4
AVL29530.1\|659933_660134_+\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	6.0e-32	98.5
AVL29531.1\|660136_660460_+\|holin	holin	A0A0A7NRY9	Enterobacteria_phage	1.6e-50	99.1
AVL29532.1\|660456_660849_+	peptidase M15	A0A0A7NQ86	Enterobacteria_phage	6.4e-70	97.7
AVL29533.1\|660845_661253_+	DUF2570 domain-containing protein	A0A0A7NPY2	Enterobacteria_phage	1.2e-63	95.6
AVL29534.1\|661391_663272_+	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	3.8e-301	81.0
AVL29535.1\|663295_663763_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	2.1e-83	96.1
AVL29536.1\|663755_664391_+	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	5.3e-114	99.5
AVL29537.1\|664387_664969_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	1.2e-101	97.4
AVL29538.1\|664965_665316_+\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	9.2e-60	100.0
AVL29539.1\|665319_666216_+\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	5.7e-154	97.3
AVL29540.1\|666208_666739_+\|tail	phage tail protein I	A0A0A7NPV1	Enterobacteria_phage	1.1e-93	99.4
AVL29541.1\|666741_668874_+\|tail	phage tail protein	U5N099	Enterobacteria_phage	1.2e-130	66.4
AVL29542.1\|668873_669452_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	7.7e-96	89.0
AVL33840.1\|669495_669972_-	serine acetyltransferase	NA	NA	NA	NA
AVL29543.1\|670224_670719_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	5.2e-85	98.8
AVL29544.1\|670725_673533_-\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	92.5
AVL29545.1\|673519_673756_-\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	1.9e-21	96.1
AVL29546.1\|673683_674049_-\|tail	phage tail protein	A0A0A7NPZ0	Enterobacteria_phage	1.4e-55	96.7
AVL29547.1\|674103_674616_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	2.7e-92	98.8
AVL29548.1\|674615_675800_-\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	3.8e-222	98.0
AVL29549.1\|675957_677067_+	late control protein	A0A0A7NQ97	Enterobacteria_phage	3.7e-195	94.8
AVL33841.1\|677158_678241_-	hypothetical protein	NA	NA	NA	NA
AVL29550.1\|678585_679566_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	99.1
AVL29551.1\|679759_680020_+	hypothetical protein	NA	NA	NA	NA
AVL29552.1\|680210_680351_+	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	1.5e-18	97.8
AVL29553.1\|680652_680952_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.2e-13	40.0
AVL29554.1\|680956_683344_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
AVL29555.1\|683358_684342_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.1e-33	38.5
AVL33842.1\|684624_684669_-\|tRNA	phenylalanyl--tRNA ligase operon leader peptide	NA	NA	NA	NA
AVL29556.1\|684791_685148_-	50S ribosomal protein L20	NA	NA	NA	NA
AVL29557.1\|685200_685398_-	50S ribosomal protein L35	NA	NA	NA	NA
AVL29558.1\|685494_686037_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	6.3e-15	32.9
AVL29559.1\|686040_687969_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	5.5e-130	37.3
AVL29560.1\|688492_689608_+	enterotoxin	NA	NA	NA	NA
688593:688609	attR	NA	NA	NA	NA
AVL29561.1\|689629_690391_+	hypothetical protein	NA	NA	NA	NA
AVL29562.1\|690566_690674_+	hypothetical protein	NA	NA	NA	NA
AVL29563.1\|690726_691485_-	DUF481 domain-containing protein	NA	NA	NA	NA
AVL29564.1\|691771_692701_+	6-phosphofructokinase II	NA	NA	NA	NA
AVL29565.1\|692801_693092_+	endoribonuclease GhoS	NA	NA	NA	NA
AVL29566.1\|693197_694058_+	fructosamine kinase family protein	NA	NA	NA	NA
AVL29567.1\|694098_694635_-	hypothetical protein	NA	NA	NA	NA
AVL29568.1\|694781_695450_+	2-deoxyglucose-6-phosphate phosphatase	NA	NA	NA	NA
AVL29569.1\|695612_696203_+	metal-dependent hydrolase	NA	NA	NA	NA
AVL29570.1\|696335_697727_+	L-cystine transporter	NA	NA	NA	NA
AVL33843.1\|697730_697967_-	hypothetical protein	NA	NA	NA	NA
AVL29571.1\|697992_698973_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	99.1

DBSCAN-SWA_4

800072 : 890120

112

Enterobacteria_phage(36.62%)

head,integrase,tail,protease,capsid,portal,tRNA,terminase,lysis

attL 819945:819960|attR 894162:894177

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL29679.1\|800072_800954_-\|protease	protease HtpX	NA	NA	NA	NA
AVL29680.1\|801145_803194_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	6.8e-86	33.5
AVL29681.1\|803213_803912_-	RNA chaperone ProQ	NA	NA	NA	NA
AVL29682.1\|804008_804506_-	GAF domain-containing protein	NA	NA	NA	NA
AVL29683.1\|804635_805919_+	paraquat-inducible membrane protein A	NA	NA	NA	NA
AVL29684.1\|805887_808521_+	MCE family protein	NA	NA	NA	NA
AVL33847.1\|808600_810040_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
AVL29685.1\|810157_810394_+	DUF1480 domain-containing protein	NA	NA	NA	NA
AVL33848.1\|810498_810690_+	DUF1482 domain-containing protein	NA	NA	NA	NA
AVL29686.1\|810690_811347_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	3.6e-57	50.7
AVL29687.1\|811742_812084_-	DUF2511 domain-containing protein	NA	NA	NA	NA
AVL29688.1\|812096_812969_-	copper resistance protein D	NA	NA	NA	NA
AVL29689.1\|812972_813347_-	CopC domain-containing protein YobA	NA	NA	NA	NA
AVL29690.1\|813485_813716_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.3e-14	61.8
AVL29691.1\|813817_814474_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
AVL29692.1\|814497_815160_+	DNA polymerase III subunit epsilon	Q6UAU3	Klebsiella_phage	2.0e-07	41.6
AVL29693.1\|815156_817217_-	oligopeptidase B	NA	NA	NA	NA
AVL29694.1\|817425_818085_-	DUF533 domain-containing protein	NA	NA	NA	NA
AVL29695.1\|818411_818768_-	protein YebF	NA	NA	NA	NA
AVL29696.1\|818834_819125_-	damage-inducible protein YebG	NA	NA	NA	NA
AVL29697.1\|819258_820437_+	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
819945:819960	attL	NA	NA	NA	NA
AVL29698.1\|820492_821134_-	KHG/KDPG aldolase	NA	NA	NA	NA
AVL29699.1\|821170_822982_-	phosphogluconate dehydratase	NA	NA	NA	NA
AVL29700.1\|823216_824692_-	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	9.9e-79	37.3
AVL29701.1\|825029_825899_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AVL29702.1\|826026_827469_+	pyruvate kinase	NA	NA	NA	NA
AVL29703.1\|827599_828571_-	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
AVL29704.1\|828690_830013_-	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	1.2e-14	40.9
AVL33849.1\|830028_830961_-	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
AVL29705.1\|831039_831795_+	Mn2+/Zn2+ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.3e-18	28.3
AVL29706.1\|831791_832577_+	zinc ABC transporter permease	NA	NA	NA	NA
AVL29707.1\|832723_833734_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	5.6e-09	25.5
AVL29708.1\|833742_834354_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
AVL33850.1\|834492_834558_-	hypothetical protein	NA	NA	NA	NA
AVL29709.1\|834628_835231_+	hypothetical protein	NA	NA	NA	NA
AVL29710.1\|835232_835754_-	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	2.0e-10	35.1
AVL29711.1\|835788_836529_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AVL29712.1\|836557_837010_-	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
AVL29713.1\|837002_838775_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
AVL29714.1\|839084_839651_+	hydrolase	NA	NA	NA	NA
AVL33851.1\|839732_839849_-	preprotein translocase subunit SecY	NA	NA	NA	NA
AVL29715.1\|840005_840254_+	damage-inducible protein DinI	K7PLW4	Enterobacteria_phage	1.8e-38	100.0
AVL33852.1\|840250_840346_-\|capsid	capsid protein	NA	NA	NA	NA
AVL29716.1\|840389_840650_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
AVL33853.1\|840792_841326_-	DUF4376 domain-containing protein	Q9LA61	Enterobacterial_phage	5.4e-35	47.2
AVL29717.1\|841409_842948_-\|tail	phage tail protein	A0A2D1UII2	Escherichia_phage	8.8e-54	92.2
AVL29718.1\|843099_843699_-	Ail/Lom family protein	Q9EV15	Enterobacteria_phage	9.1e-108	97.0
AVL29719.1\|843766_847162_-	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	88.6
AVL29720.1\|847222_847894_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	3.1e-104	99.6
AVL29721.1\|847791_848535_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	6.1e-146	94.7
AVL29722.1\|848539_849238_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	3.4e-130	97.4
AVL29723.1\|849237_849567_-\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	8.7e-52	90.8
AVL29724.1\|849563_852176_-\|tail	phage tail tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	87.1
AVL29725.1\|852156_852570_-\|tail	phage tail assembly protein T	Q687F4	Enterobacteria_phage	2.1e-42	82.2
AVL29726.1\|852596_853019_-\|tail	phage minor tail protein G	Q687F5	Enterobacteria_phage	1.1e-70	97.1
AVL29727.1\|853032_853785_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	3.5e-133	98.0
AVL29728.1\|853792_854188_-\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
AVL29729.1\|854184_854760_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	6.4e-50	57.8
AVL29730.1\|854774_855128_-\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	1.1e-41	70.1
AVL29731.1\|855120_855504_-	DNA-packaging protein FI	NA	NA	NA	NA
AVL29732.1\|855555_856584_-\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	1.1e-113	62.2
AVL29733.1\|856641_856989_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	8.9e-23	58.1
AVL29734.1\|857025_858531_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.3e-99	53.1
AVL29735.1\|858520_860113_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	4.2e-184	60.5
AVL29736.1\|860109_860316_-\|tail	phage tail protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
AVL29737.1\|860299_862228_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	7.4e-260	66.6
AVL29738.1\|862199_862748_-\|terminase	phage terminase small subunit	A0A0U2S671	Escherichia_phage	1.0e-57	84.2
AVL29739.1\|863142_863328_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	3.2e-19	90.4
AVL29740.1\|863460_863601_-	hypothetical protein	NA	NA	NA	NA
AVL33854.1\|863951_864419_-\|lysis	lysis protein	Q6H9V3	Enterobacteria_phage	1.5e-65	83.8
AVL29741.1\|864567_864783_-	hypothetical protein	NA	NA	NA	NA
AVL29742.1\|864748_864964_+	hypothetical protein	Q8VNN9	Enterobacteria_phage	7.2e-23	88.5
AVL29743.1\|864906_865440_-	lysozyme	Q08J98	Stx2-converting_phage	1.1e-101	96.6
AVL29744.1\|865568_865883_+	hypothetical protein	Q08J99	Stx2-converting_phage	4.7e-55	100.0
AVL33855.1\|865892_866699_-	hypothetical protein	Q08JA0	Stx2-converting_phage	4.8e-152	99.6
AVL29745.1\|867067_868921_-	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	0.0e+00	90.6
AVL29746.1\|869712_870762_-	site-specific DNA-methyltransferase	S5MDR0	Escherichia_phage	3.1e-188	91.4
AVL29747.1\|870913_871117_-	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
AVL29748.1\|871381_872308_+	hypothetical protein	NA	NA	NA	NA
AVL29749.1\|872294_872843_+	hypothetical protein	NA	NA	NA	NA
AVL29750.1\|872855_873197_-	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	4.2e-57	90.3
AVL29751.1\|873214_874204_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.4e-193	99.4
AVL29752.1\|874211_875027_-	KilA-N domain-containing protein	U5P4K5	Shigella_phage	2.2e-149	99.6
AVL29753.1\|875189_875585_-	hypothetical protein	A0A0P0ZD39	Stx2-converting_phage	5.7e-66	98.4
AVL29754.1\|875581_875908_-	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	2.7e-53	98.1
AVL29755.1\|875904_876558_-	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	1.9e-127	99.5
AVL29756.1\|876557_877052_-	PerC family transcriptional regulator	A0A291AWV6	Escherichia_phage	1.5e-84	96.3
AVL29757.1\|877048_877867_-	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	2.8e-123	88.1
AVL29758.1\|877863_878088_-	hypothetical protein	A5LH70	Enterobacteria_phage	2.4e-37	95.9
AVL29759.1\|878084_879230_-	peptidase	A5LH69	Enterobacteria_phage	3.1e-173	83.5
AVL29760.1\|879226_879784_-	hypothetical protein	Q8SBF4	Shigella_phage	5.3e-94	94.1
AVL29761.1\|879776_880037_-	XRE family transcriptional regulator	K7PJQ8	Enterobacteria_phage	5.4e-41	100.0
AVL29762.1\|880008_880161_-	amino acid permease	NA	NA	NA	NA
AVL29763.1\|880134_880827_+	XRE family transcriptional regulator	S5FUZ3	Shigella_phage	6.4e-121	96.1
AVL29764.1\|880906_881161_+	hypothetical protein	A0A291AWY6	Escherichia_phage	2.7e-13	97.4
AVL29765.1\|881262_881457_-	hypothetical protein	A0A291AWX8	Escherichia_phage	7.1e-30	96.9
AVL29766.1\|881529_881892_+	hypothetical protein	Q8SBF8	Shigella_phage	7.5e-57	94.2
AVL29767.1\|881957_882782_+	hypothetical protein	K7PJQ6	Enterobacteria_phage	1.1e-148	98.9
AVL29768.1\|882909_883446_+	HD family hydrolase	A0A0P0ZCH9	Stx2-converting_phage	2.2e-100	99.4
AVL29769.1\|883436_883799_+	hypothetical protein	K7PH61	Enterobacteria_phage	6.8e-66	97.5
AVL29770.1\|883795_883999_+	hypothetical protein	K7PLX1	Enterobacteria_phage	1.0e-31	98.5
AVL29771.1\|883991_884231_+	hypothetical protein	S5MQM0	Escherichia_phage	1.6e-34	94.9
AVL29772.1\|884227_884776_+	hypothetical protein	A0A1I9LJM5	Stx_converting_phage	1.4e-59	97.5
AVL33856.1\|885005_885293_+	hypothetical protein	G9L6B3	Escherichia_phage	1.4e-53	97.9
AVL29773.1\|885289_886048_+	dTDP-6-deoxy-L-hexose 3-O-methyltransferase	A0A1U9AJ59	Stx1_converting_phage	2.7e-109	82.0
AVL29774.1\|886132_886375_+	DUF4222 domain-containing protein	Q6H9Z8	Enterobacteria_phage	4.3e-32	87.5
AVL29775.1\|886378_886525_+	hypothetical protein	A0A1B5FPC2	Escherichia_phage	1.6e-21	93.8
AVL29776.1\|886533_886770_+	excisionase	Q8W657	Enterobacteria_phage	6.4e-41	100.0
AVL29777.1\|886825_888136_+\|integrase	integrase	Q8W658	Enterobacteria_phage	3.0e-244	95.4
AVL29778.1\|888117_888888_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	6.1e-72	99.2
AVL29779.1\|888940_889336_+	hypothetical protein	NA	NA	NA	NA
AVL29780.1\|889376_890120_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0
894162:894177	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1189050 : 1198492

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL30040.1\|1189050_1190187_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	4.6e-161	97.1
AVL30041.1\|1190183_1192184_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.3
AVL30042.1\|1192308_1192770_+	hypothetical protein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
AVL30043.1\|1192810_1193281_-	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
AVL30044.1\|1193327_1194047_-	DNA-binding response regulator	NA	NA	NA	NA
AVL30045.1\|1194043_1195729_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
AVL30046.1\|1195950_1196682_+	transcriptional regulator	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
AVL30047.1\|1196741_1196849_+	hypothetical protein	NA	NA	NA	NA
AVL30048.1\|1196829_1197561_-	osmoprotectant uptake system permease	NA	NA	NA	NA
AVL30049.1\|1197565_1198492_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.8e-23	30.8

DBSCAN-SWA_6

1399220 : 1464252

Enterobacteria_phage(43.24%)

head,integrase,tail,protease,capsid,portal,tRNA,terminase,transposase

attL 1429025:1429041|attR 1466705:1466721

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL30230.1\|1399220_1400033_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
AVL30231.1\|1400032_1401046_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
AVL30232.1\|1401111_1402248_-	erythronate-4-phosphate dehydrogenase	A0A2R8FDS8	Brazilian_cedratvirus	2.6e-23	29.1
AVL30233.1\|1402346_1403342_+	flagella biosynthesis regulator	NA	NA	NA	NA
AVL30234.1\|1403338_1404517_-	MFS transporter	NA	NA	NA	NA
AVL30235.1\|1404458_1404680_+	hypothetical protein	NA	NA	NA	NA
AVL30236.1\|1404800_1406021_-	3-oxoacyl-ACP synthase I	NA	NA	NA	NA
AVL30237.1\|1406179_1408186_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
AVL30238.1\|1408306_1408585_-	YfcL family protein	NA	NA	NA	NA
AVL30239.1\|1408618_1409167_-	elongation factor P hydroxylase	NA	NA	NA	NA
AVL30240.1\|1409166_1409976_-	hypothetical protein	NA	NA	NA	NA
AVL30241.1\|1409975_1410800_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
AVL30242.1\|1410803_1411889_-	chorismate synthase	A0A291AU41	Pandoravirus	9.1e-90	48.4
AVL30243.1\|1411923_1412856_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
AVL30244.1\|1413021_1413573_+	endonuclease SmrB	NA	NA	NA	NA
AVL30245.1\|1413766_1414747_-\|transposase	IS110 family transposase IS621	NA	NA	NA	NA
AVL30246.1\|1414973_1415831_-	DUF2544 domain-containing protein	NA	NA	NA	NA
AVL30247.1\|1415832_1416357_-	fimbrial protein	NA	NA	NA	NA
AVL30248.1\|1416353_1416824_-	fimbrial protein	NA	NA	NA	NA
AVL30249.1\|1416820_1417435_-	fimbrial protein	NA	NA	NA	NA
AVL30250.1\|1417343_1418096_-	fimbrial protein	NA	NA	NA	NA
AVL30251.1\|1418115_1420758_-	outer membrane usher protein	NA	NA	NA	NA
AVL30252.1\|1420839_1421403_-	type 1 fimbrial protein	NA	NA	NA	NA
AVL30253.1\|1422077_1422563_-	phosphohistidine phosphatase	NA	NA	NA	NA
AVL30254.1\|1422765_1424910_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
AVL30255.1\|1424909_1426220_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
AVL30256.1\|1426399_1426684_-	DUF406 domain-containing protein	NA	NA	NA	NA
AVL30257.1\|1426768_1427020_-	hypothetical protein	NA	NA	NA	NA
AVL30258.1\|1427055_1428396_+	long-chain fatty acid transporter	NA	NA	NA	NA
AVL30259.1\|1428761_1429820_+	hypothetical protein	NA	NA	NA	NA
1429025:1429041	attL	NA	NA	NA	NA
AVL30260.1\|1430001_1430757_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
AVL30261.1\|1430782_1430953_-	hypothetical protein	NA	NA	NA	NA
AVL30262.1\|1431050_1431983_+	transporter	E7DYY8	Enterobacteria_phage	1.2e-167	100.0
AVL30263.1\|1432294_1433452_+\|integrase	integrase	A5VW56	Enterobacteria_phage	5.3e-221	100.0
AVL30264.1\|1433680_1435591_+	acyltransferase	C6ZR20	Salmonella_phage	4.7e-57	32.6
AVL30265.1\|1435661_1437641_-\|tail	phage tail protein	A5VW57	Enterobacteria_phage	6.2e-60	93.5
AVL30266.1\|1437741_1438620_-	phage repressor protein/antirepressor Ant	I6R977	Salmonella_phage	5.8e-95	78.1
AVL30267.1\|1438852_1438993_-	Arc family DNA-binding protein	A0A0M4S6R9	Salmonella_phage	7.5e-05	56.8
AVL30268.1\|1439098_1439350_+	Arc family DNA-binding protein	A5VW59	Enterobacteria_phage	1.5e-35	93.9
AVL30269.1\|1439346_1439661_+	hypothetical protein	NA	NA	NA	NA
AVL30270.1\|1439686_1440172_+	lipoprotein	NA	NA	NA	NA
AVL30271.1\|1440186_1442031_-	DNA transfer protein	A0A192Y934	Salmonella_phage	4.0e-247	73.8
AVL30272.1\|1442030_1443497_-	acyltransferase	B6SCW4	Bacteriophage	8.4e-139	62.0
AVL30273.1\|1443506_1444199_-	DNA transfer protein	G5DA80	Enterobacteria_phage	9.2e-112	100.0
AVL30274.1\|1444201_1444657_-	hypothetical protein	Q716G5	Shigella_phage	5.7e-86	98.7
AVL30275.1\|1444656_1445505_-	hypothetical protein	Q716G6	Shigella_phage	3.4e-100	97.5
AVL30276.1\|1445504_1446923_-	hypothetical protein	Q9AYZ4	Salmonella_phage	3.9e-274	98.9
AVL30277.1\|1446931_1447414_-	packaged DNA stabilization protein p27	Q716G8	Shigella_phage	8.4e-88	99.4
AVL30278.1\|1447388_1447574_-	hypothetical protein	Q716G9	Shigella_phage	2.7e-26	100.0
AVL30279.1\|1447616_1448888_-\|head	head protein	Q9AYZ7	Salmonella_phage	1.2e-239	99.5
AVL30280.1\|1448899_1449784_-\|capsid	phage capsid protein	Q716H1	Shigella_phage	2.0e-143	99.0
AVL30281.1\|1449797_1451924_-\|portal	portal protein	Q9AYZ9	Salmonella_phage	0.0e+00	99.0
AVL30282.1\|1451926_1453339_-\|terminase	PBSX family phage terminase large subunit	Q716H3	Shigella_phage	9.8e-278	99.8
AVL30283.1\|1453335_1453776_-\|terminase	terminase	C7U0V7	Enterobacteria_phage	1.7e-79	99.3
AVL30284.1\|1453778_1454021_-	DUF2560 domain-containing protein	A5VW77	Enterobacteria_phage	1.3e-36	100.0
AVL30285.1\|1455067_1455199_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	A5VWA4	Enterobacteria_phage	1.4e-16	100.0
AVL30286.1\|1455183_1455336_+	host cell division inhibitory peptide Kil	A5VWA5	Enterobacteria_phage	4.7e-21	100.0
AVL30287.1\|1455592_1456198_+	recombinase	K7P6W7	Enterobacteria_phage	4.1e-108	100.0
AVL30288.1\|1456197_1456581_+	hypothetical protein	K7P7R8	Enterobacteria_phage	1.2e-65	97.6
AVL30289.1\|1456604_1456901_+	RecBCD nuclease inhibitor	A5VWB0	Enterobacteria_phage	3.9e-51	99.0
AVL30290.1\|1456911_1457202_+	hypothetical protein	K7P7M4	Enterobacteria_phage	2.4e-45	99.0
AVL30291.1\|1457198_1457366_+	DUF2737 domain-containing protein	Q716F2	Shigella_phage	8.6e-24	98.2
AVL30292.1\|1457362_1458034_+	hypothetical protein	A0A0F6R7P8	Escherichia_coli_O157_typing_phage	3.0e-83	73.2
AVL30293.1\|1458206_1458395_+	hypothetical protein	Q286W7	Escherichia_phage	6.3e-23	92.6
AVL30294.1\|1458396_1458606_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	1.3e-32	91.2
AVL30295.1\|1458602_1459232_+	DUF550 domain-containing protein	K7P7E3	Enterobacteria_phage	1.1e-55	58.6
AVL30296.1\|1459328_1459508_+	Eag protein	K7PL40	Enterobacteria_phage	2.5e-29	100.0
AVL30297.1\|1459639_1459840_+	transcriptional regulator	K7P7V0	Enterobacteria_phage	2.4e-33	100.0
AVL30298.1\|1460369_1461617_-	MFS transporter	NA	NA	NA	NA
AVL30299.1\|1461688_1462603_-	aminoimidazole riboside kinase	NA	NA	NA	NA
AVL30300.1\|1462818_1464252_+	glycoside hydrolase family 32 protein	F8WPR5	Bacillus_phage	7.0e-29	25.4
1466705:1466721	attR	NA	NA	NA	NA

DBSCAN-SWA_7

1824854 : 1831994

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL30623.1\|1824854_1827416_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.7e-30	20.6
AVL30624.1\|1827521_1828178_+	serine/threonine protein phosphatase	A0A077SLQ6	Escherichia_phage	1.5e-50	46.8
AVL30625.1\|1828228_1828996_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	3.3e-70	56.7
AVL30626.1\|1829191_1830100_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
AVL30627.1\|1830096_1831359_+	3-oxo-tetronate kinase	A0A077SLJ7	Escherichia_phage	1.3e-135	61.4
AVL30628.1\|1831355_1831994_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0

DBSCAN-SWA_8

2084914 : 2123082

Pseudomonas_phage(18.18%)

tRNA,integrase,protease,transposase

attL 2077022:2077036|attR 2099342:2099356

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2077022:2077036	attL	NA	NA	NA	NA
AVL30858.1\|2084914_2085634_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
AVL30859.1\|2085703_2085841_+	adenine glycosylase	NA	NA	NA	NA
AVL30860.1\|2085794_2086847_+	adenine DNA glycosylase	NA	NA	NA	NA
AVL30861.1\|2086874_2087150_+	Fe(2+)-trafficking protein	NA	NA	NA	NA
AVL30862.1\|2087214_2088294_+	lytic murein transglycosylase	NA	NA	NA	NA
AVL30863.1\|2088495_2089752_+	nucleoside permease NupG	NA	NA	NA	NA
AVL30864.1\|2089801_2091937_-	ornithine decarboxylase	NA	NA	NA	NA
AVL30865.1\|2092016_2092220_-	hypothetical protein	NA	NA	NA	NA
AVL30866.1\|2092334_2093042_+	hypothetical protein	NA	NA	NA	NA
AVL30867.1\|2093420_2094683_+\|integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	6.9e-81	43.1
AVL30868.1\|2095817_2096027_+	hypothetical protein	NA	NA	NA	NA
AVL30869.1\|2096180_2096396_-	hypothetical protein	NA	NA	NA	NA
AVL30870.1\|2096662_2097181_-	DUF2931 domain-containing protein	NA	NA	NA	NA
AVL33898.1\|2097183_2097366_-	hypothetical protein	NA	NA	NA	NA
AVL30871.1\|2097666_2100516_+	helicase SNF2	A0A2H4J643	uncultured_Caudovirales_phage	2.2e-183	39.6
2099342:2099356	attR	NA	NA	NA	NA
AVL30872.1\|2100541_2101522_+	ATP-binding protein	A0A1B2RW50	Lymphocystis_disease_virus	4.2e-17	30.2
AVL30873.1\|2101531_2103919_+\|protease	serine protease	NA	NA	NA	NA
AVL30874.1\|2103928_2105557_+	site-specific DNA-methyltransferase	A0A0K1LNZ9	Escherichia_phage	4.6e-85	42.6
AVL30875.1\|2105559_2108430_+	restriction endonuclease subunit R	NA	NA	NA	NA
AVL30876.1\|2108518_2108812_+	hypothetical protein	NA	NA	NA	NA
AVL30877.1\|2108881_2109232_+	hypothetical protein	Q716C1	Shigella_phage	1.8e-39	98.9
AVL30878.1\|2109151_2110303_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	3.4e-42	35.6
AVL30879.1\|2110725_2111157_-	hypothetical protein	NA	NA	NA	NA
AVL30880.1\|2111450_2112974_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	6.2e-44	31.8
AVL33899.1\|2113839_2114535_+	peptidase	Q9LA58	Enterobacterial_phage	2.2e-65	57.6
AVL30881.1\|2118786_2119224_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-19	60.3
AVL30882.1\|2119600_2121214_+\|transposase	IS66 family transposase ISEc43	A0A0P0ZEB3	Stx2-converting_phage	8.3e-172	61.4
AVL30883.1\|2121546_2121909_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	6.4e-40	62.5
AVL30884.1\|2121948_2123082_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

2933212 : 2963298

Escherichia_phage(27.27%)

tRNA,integrase,transposase

attL 2947476:2947505|attR 2969350:2969379

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL31658.1\|2933212_2933902_+\|tRNA	tRNA (guanosine(18)-2'-O)-methyltransferase TrmH	NA	NA	NA	NA
AVL31659.1\|2933907_2935989_+	DNA helicase RecG	NA	NA	NA	NA
AVL31660.1\|2936154_2937360_-	sodium/glutamate symport carrier protein	NA	NA	NA	NA
AVL31661.1\|2937639_2939031_+	xanthine permease XanP	H9YQ34	environmental_Halophage	1.4e-71	100.0
AVL31662.1\|2939151_2940861_+	AsmA family protein	NA	NA	NA	NA
AVL31663.1\|2940913_2943232_-	alpha-xylosidase	NA	NA	NA	NA
AVL31664.1\|2943241_2944624_-	inner membrane symporter YicJ	NA	NA	NA	NA
AVL31665.1\|2945310_2946495_+	DUF4102 domain-containing protein	Q7M297	Enterobacteria_phage	3.4e-162	69.9
AVL31666.1\|2947344_2947434_-	acetyltransferase	NA	NA	NA	NA
2947476:2947505	attL	NA	NA	NA	NA
AVL31667.1\|2947500_2950467_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
AVL31668.1\|2950469_2951030_-	DNA resolvase	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
AVL31669.1\|2951155_2951770_-	DUF3330 domain-containing protein	NA	NA	NA	NA
AVL31670.1\|2951708_2952722_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AVL33933.1\|2952879_2953353_+	trimethoprim-resistant dihydrofolate reductase DfrA7	A0A1B2IBQ4	Erwinia_phage	8.4e-16	32.0
AVL31671.1\|2953582_2953930_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AVL31672.1\|2953923_2954703_+	dihydropteroate synthase	NA	NA	NA	NA
AVL31673.1\|2954736_2955441_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVL31674.1\|2955940_2956801_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
AVL31675.1\|2956950_2957352_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AVL31676.1\|2957398_2958103_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AVL31677.1\|2958164_2958872_+	hypothetical protein	NA	NA	NA	NA
AVL31678.1\|2958858_2959710_+	replication protein	NA	NA	NA	NA
AVL31679.1\|2960017_2960833_+	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
AVL31680.1\|2960893_2961697_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	Q75ZG1	Hepacivirus	4.9e-24	34.3
AVL31681.1\|2961696_2962533_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
AVL31682.1\|2962593_2963298_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
2969350:2969379	attR	NA	NA	NA	NA

DBSCAN-SWA_10

3542005 : 3618605

Enterobacteria_phage(21.43%)

protease,integrase,tRNA,transposase

attL 3550074:3550089|attR 3590803:3590818

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL32200.1\|3542005_3543130_+\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	3.3e-199	99.7
AVL32201.1\|3543707_3544920_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	6.0e-167	98.3
AVL32202.1\|3544960_3546103_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AVL32203.1\|3546842_3547769_+	shiE	NA	NA	NA	NA
AVL32204.1\|3547718_3548912_-	MFS transporter	NA	NA	NA	NA
AVL32205.1\|3548984_3550772_+	aerobactin synthase IucA	NA	NA	NA	NA
3550074:3550089	attL	NA	NA	NA	NA
AVL32206.1\|3550772_3551720_+	N-acetyltransferase	NA	NA	NA	NA
AVL32207.1\|3551719_3553462_+	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA
AVL32208.1\|3553458_3554796_+	lysine 6-monooxygenase	NA	NA	NA	NA
AVL32209.1\|3554717_3556997_+	TonB-dependent receptor	NA	NA	NA	NA
AVL32210.1\|3557961_3559485_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	6.2e-44	31.8
AVL32211.1\|3559778_3560150_+	hypothetical protein	NA	NA	NA	NA
AVL32212.1\|3561155_3561581_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	4.4e-48	97.9
AVL32213.1\|3565478_3566060_-	hypothetical protein	NA	NA	NA	NA
AVL32214.1\|3566106_3569964_-\|protease	serine protease	Q9LA58	Enterobacterial_phage	2.4e-225	38.3
AVL32215.1\|3570143_3570335_+	hypothetical protein	NA	NA	NA	NA
AVL32216.1\|3570324_3571362_-	type IX secretion system membrane protein PorP/SprF	NA	NA	NA	NA
AVL32217.1\|3576039_3576303_+	hypothetical protein	NA	NA	NA	NA
AVL32218.1\|3576403_3577666_-\|integrase	integrase	Q7M297	Enterobacteria_phage	9.3e-78	38.3
AVL32219.1\|3578045_3578621_-	transcriptional regulator	NA	NA	NA	NA
AVL32220.1\|3578657_3580355_-	protein-disulfide reductase DsbD	NA	NA	NA	NA
AVL32221.1\|3580330_3580669_-	divalent-cation tolerance protein CutA	NA	NA	NA	NA
AVL32222.1\|3580784_3582086_-	C4-dicarboxylate transporter	NA	NA	NA	NA
AVL32223.1\|3582203_3583640_-	aspartate ammonia-lyase	NA	NA	NA	NA
AVL32224.1\|3583976_3584453_+	membrane protein FxsA	NA	NA	NA	NA
AVL32225.1\|3584468_3585725_-	amino acid permease	NA	NA	NA	NA
AVL32226.1\|3586000_3586294_+	co-chaperone GroES	K4F9I2	Cronobacter_phage	9.2e-13	45.4
AVL32227.1\|3586337_3587984_+	molecular chaperone GroEL	A0A2I7SAK5	Vibrio_phage	5.3e-190	68.9
AVL32228.1\|3588121_3588475_+	DUF4156 domain-containing protein	NA	NA	NA	NA
AVL32229.1\|3588677_3589547_-	hypothetical protein	NA	NA	NA	NA
AVL32230.1\|3589936_3590965_-	EF-P beta-lysylation protein EpmB	NA	NA	NA	NA
3590803:3590818	attR	NA	NA	NA	NA
AVL32231.1\|3591006_3591573_+	elongation factor P	NA	NA	NA	NA
AVL32232.1\|3591624_3591750_+	entericidin A	NA	NA	NA	NA
AVL32233.1\|3591860_3592007_+	entericidin B	NA	NA	NA	NA
AVL32234.1\|3592181_3592499_+	quaternary ammonium compound-resistance protein SugE	NA	NA	NA	NA
AVL32235.1\|3592495_3593029_-	hypothetical protein	A0A1W6JNX6	Morganella_phage	2.7e-47	55.0
AVL32236.1\|3593117_3594251_-	BlaEC family class C beta-lactamase	NA	NA	NA	NA
AVL32237.1\|3594313_3594673_-	fumarate reductase subunit D	NA	NA	NA	NA
AVL32238.1\|3594683_3595079_-	fumarate reductase subunit C	NA	NA	NA	NA
AVL32239.1\|3595089_3595824_-	fumarate reductase iron-sulfur subunit	NA	NA	NA	NA
AVL32240.1\|3595816_3597625_-	fumarate reductase (quinol) flavoprotein subunit	NA	NA	NA	NA
AVL32241.1\|3597949_3598927_+	elongation factor P--(R)-beta-lysine ligase	A0A2K9KZX5	Tupanvirus	6.8e-28	28.2
AVL32242.1\|3599145_3600648_+	glutamate/gamma-aminobutyrate family transporter YjeM	NA	NA	NA	NA
AVL32243.1\|3600699_3601014_+	hypothetical protein	NA	NA	NA	NA
AVL32244.1\|3601010_3601325_+	hypothetical protein	NA	NA	NA	NA
AVL32245.1\|3601353_3604677_-	miniconductance mechanosensitive channel MscM	NA	NA	NA	NA
AVL32246.1\|3604698_3605667_-	phosphatidylserine decarboxylase proenzyme	NA	NA	NA	NA
AVL32247.1\|3605763_3606816_-	ribosome small subunit-dependent GTPase	NA	NA	NA	NA
AVL32248.1\|3606910_3607456_+	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	2.2e-28	40.4
AVL33961.1\|3608198_3608252_+	hypothetical protein	NA	NA	NA	NA
AVL32249.1\|3608234_3609374_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
AVL32250.1\|3609372_3610920_+	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA
AVL32251.1\|3610891_3611353_+\|tRNA	tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE	NA	NA	NA	NA
AVL32252.1\|3611371_3612709_+	N-acetylmuramoyl-L-alanine amidase AmiB	A0A067ZJB6	Vibrio_phage	8.8e-18	31.0
AVL32253.1\|3612718_3614566_+	DNA mismatch repair protein MutL	A0A1B2LRQ5	Wolbachia_phage	2.6e-60	41.6
AVL32254.1\|3614558_3615509_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
AVL32255.1\|3615594_3615903_+	RNA-binding protein Hfq	NA	NA	NA	NA
AVL32256.1\|3615979_3617260_+	GTPase HflX	NA	NA	NA	NA
AVL32257.1\|3617345_3618605_+\|protease	protease modulator HflK	A0A1L2CVV0	Pectobacterium_phage	3.6e-05	25.5

DBSCAN-SWA_11

4059267 : 4121590

Emiliania_huxleyi_virus(12.5%)

protease,transposase,tRNA,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL32667.1\|4059267_4060620_+\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
AVL32668.1\|4060649_4063082_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
AVL32669.1\|4063203_4063689_+	chaperone protein Skp	NA	NA	NA	NA
AVL32670.1\|4063692_4064718_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
AVL32671.1\|4064822_4065278_+	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA
AVL32672.1\|4065281_4066070_+	acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA
AVL32673.1\|4066069_4067218_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
AVL32674.1\|4067214_4067811_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	1.0e-26	40.0
AVL32675.1\|4067847_4071330_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	2.2e-209	36.9
AVL32676.1\|4071342_4072302_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
AVL32677.1\|4072400_4074542_+	lysine decarboxylase LdcC	NA	NA	NA	NA
AVL32678.1\|4074598_4074988_+	VOC family protein	NA	NA	NA	NA
AVL32679.1\|4075052_4076351_+\|tRNA	tRNA(Ile)-lysidine synthetase	NA	NA	NA	NA
AVL33982.1\|4076399_4076654_-	protein rof	NA	NA	NA	NA
AVL32680.1\|4076646_4076847_-	hypothetical protein	NA	NA	NA	NA
AVL32681.1\|4077012_4077558_+	hypothetical protein	NA	NA	NA	NA
AVL32682.1\|4077554_4077977_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
AVL32683.1\|4077990_4078701_+	copper homeostasis/adhesion lipoprotein NlpE	NA	NA	NA	NA
AVL32684.1\|4078707_4078959_-	hypothetical protein	NA	NA	NA	NA
AVL32685.1\|4078950_4079931_+\|transposase	IS110 family transposase IS621	NA	NA	NA	NA
AVL32686.1\|4081010_4082729_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
AVL32687.1\|4082840_4083548_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
AVL32688.1\|4083544_4083949_-	Rcs stress response system protein RcsF	NA	NA	NA	NA
AVL32689.1\|4084066_4084882_-	methionine ABC transporter substrate-binding protein MetQ	NA	NA	NA	NA
AVL32690.1\|4084921_4085575_-	methionine ABC transporter	NA	NA	NA	NA
AVL32691.1\|4085567_4086599_-	methionine import ATP-binding protein MetN	G9BWD6	Planktothrix_phage	7.2e-36	40.2
AVL32692.1\|4086786_4087359_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
AVL32693.1\|4093253_4094057_+	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	3.2e-39	36.6
AVL32694.1\|4094053_4094968_-	LysR family transcriptional regulator	NA	NA	NA	NA
AVL32695.1\|4095208_4096009_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
AVL32696.1\|4096086_4096857_+	SAM-dependent methyltransferase	NA	NA	NA	NA
AVL32697.1\|4096904_4098263_-	lytic transglycosylase	A0A2H4J9N7	uncultured_Caudovirales_phage	5.8e-09	36.0
AVL32698.1\|4098334_4099090_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AVL32699.1\|4099123_4099846_+	SAM-dependent methyltransferase	NA	NA	NA	NA
AVL32700.1\|4099842_4100310_-	ribonuclease HI	J9Q745	Salmonella_phage	1.0e-50	58.7
AVL33983.1\|4100374_4101106_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	3.4e-40	39.0
AVL32701.1\|4101045_4101225_-	hypothetical protein	NA	NA	NA	NA
AVL32702.1\|4101641_4102427_+	aminopeptidase	NA	NA	NA	NA
AVL32703.1\|4102563_4103043_-	hypothetical protein	NA	NA	NA	NA
AVL32704.1\|4103052_4103967_-	hypothetical protein	NA	NA	NA	NA
AVL32705.1\|4104010_4104493_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AVL32706.1\|4104516_4105869_-	hypothetical protein	NA	NA	NA	NA
AVL33984.1\|4105879_4109344_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
AVL32707.1\|4109422_4110838_-	type VI secretion system protein TssA	NA	NA	NA	NA
AVL32708.1\|4110842_4111586_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
AVL32709.1\|4111582_4114342_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	9.4e-83	30.6
AVL32710.1\|4114350_4115112_-	hypothetical protein	NA	NA	NA	NA
AVL32711.1\|4115116_4116448_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AVL32712.1\|4116450_4116975_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AVL32713.1\|4116971_4118252_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
AVL32714.1\|4118276_4119359_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AVL32715.1\|4119322_4121173_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AVL32716.1\|4121176_4121590_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_12

4689659 : 4732093

Enterobacteria_phage(57.69%)

head,integrase,tail,capsid,portal,terminase,lysis

attL 4687937:4687952|attR 4711088:4711103

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4687937:4687952	attL	NA	NA	NA	NA
AVL33238.1\|4689659_4690730_-\|integrase	integrase	Q9MCR4	Enterobacteria_phage	5.1e-202	100.0
AVL33239.1\|4690707_4690926_-	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
AVL33240.1\|4690965_4691133_-	hypothetical protein	A5VWB7	Enterobacteria_phage	2.9e-27	98.2
AVL34001.1\|4691065_4691251_+	hypothetical protein	NA	NA	NA	NA
AVL33241.1\|4691305_4691557_+	hypothetical protein	NA	NA	NA	NA
AVL33242.1\|4691447_4691978_+	hypothetical protein	NA	NA	NA	NA
AVL33243.1\|4692188_4692410_-	conjugal transfer protein TraR	A0A0K2FI84	Escherichia_phage	2.9e-35	100.0
AVL33244.1\|4692508_4692790_-	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	5.5e-47	98.9
AVL33245.1\|4692800_4692992_-	hypothetical protein	A0A0P0ZC67	Stx2-converting_phage	4.7e-26	98.4
AVL33246.1\|4692964_4693147_-	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	1.3e-28	98.3
AVL33247.1\|4693143_4693824_-	exonuclease	B6DZ61	Enterobacteria_phage	5.1e-131	98.2
AVL33248.1\|4693820_4694606_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
AVL33249.1\|4694611_4694908_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	6.2e-49	99.0
AVL33250.1\|4694983_4695190_-	cell division inhibitor protein	K7P6H3	Enterobacteria_phage	3.2e-28	85.3
AVL33251.1\|4695787_4696540_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.4e-92	75.0
AVL33252.1\|4696582_4696813_+	transcriptional regulator	A0A2H4FNF3	Salmonella_phage	1.5e-21	68.0
AVL33253.1\|4696882_4697422_+	regulator	M9NZI6	Enterobacteria_phage	1.2e-61	66.1
AVL33254.1\|4697418_4698438_+	Replication protein O	A0A0M5M7Y1	Salmonella_phage	9.7e-110	63.4
AVL33255.1\|4698434_4699136_+	Replication protein P	M1FJ72	Enterobacteria_phage	1.4e-128	98.7
AVL33256.1\|4699132_4699435_+	protein ren	M1FPD5	Enterobacteria_phage	6.1e-44	97.8
AVL33257.1\|4699680_4700475_+	recombinase	A0A2K9V406	Faecalibacterium_phage	7.5e-09	28.9
AVL33258.1\|4700586_4700826_+	hypothetical protein	NA	NA	NA	NA
AVL33259.1\|4701144_4701654_+	hypothetical protein	NA	NA	NA	NA
AVL33260.1\|4701750_4701852_+	hypothetical protein	NA	NA	NA	NA
AVL33261.1\|4701848_4702304_+	hypothetical protein	I6PD71	Cronobacter_phage	4.9e-61	67.5
AVL33262.1\|4702303_4702474_+	hypothetical protein	K7P7K0	Enterobacteria_phage	1.4e-13	69.8
AVL33263.1\|4702466_4702757_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	2.8e-46	92.7
AVL33264.1\|4703111_4703252_+	YlcG family protein	K7PHH3	Enterobacteria_phage	6.5e-09	69.8
AVL33265.1\|4703337_4703721_+	antitermination protein Q	A0A088CD47	Shigella_phage	4.4e-55	83.3
AVL33266.1\|4703909_4704992_-	porin OmpD	Q1MVN1	Enterobacteria_phage	4.4e-161	78.7
AVL33267.1\|4705580_4705796_+\|lysis	lysis protein S	A5LH82	Enterobacteria_phage	9.0e-34	100.0
AVL33268.1\|4705795_4706293_+	lysozyme	M1FJA0	Enterobacteria_phage	3.2e-90	97.6
AVL33269.1\|4706289_4706727_+\|lysis	lysis protein	K7P710	Enterobacteria_phage	3.0e-68	94.5
AVL33270.1\|4706931_4707453_+	DNA-binding protein	K7P7K9	Enterobacteria_phage	1.5e-93	100.0
AVL33271.1\|4707592_4707757_-	hypothetical protein	NA	NA	NA	NA
AVL33272.1\|4707802_4708213_-	hypothetical protein	C6ZCX4	Enterobacteria_phage	1.3e-52	76.3
AVL33273.1\|4708269_4708503_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	7.3e-21	94.4
AVL34002.1\|4708608_4708752_+	DNA-packaging protein	NA	NA	NA	NA
AVL33274.1\|4708891_4709437_+\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	2.8e-95	100.0
AVL33275.1\|4711332_4711539_+\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
4711088:4711103	attR	NA	NA	NA	NA
AVL33276.1\|4711535_4713137_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.2e-311	99.8
AVL33277.1\|4713117_4714437_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.4e-230	97.7
AVL33278.1\|4714446_4714779_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.7e-55	100.0
AVL33279.1\|4714834_4715860_+\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	4.7e-189	97.9
AVL33280.1\|4715901_4716297_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	1.1e-58	95.5
AVL33281.1\|4716308_4716662_+\|tail	phage tail protein	A0A2R9YJJ5	Escherichia_phage	6.4e-61	97.4
AVL33282.1\|4716673_4717252_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.9e-80	99.5
AVL33283.1\|4717248_4717644_+\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	8.5e-70	98.5
AVL34003.1\|4717651_4718392_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	6.8e-129	97.2
AVL33284.1\|4718407_4718830_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.4e-59	85.0
AVL33285.1\|4718811_4719246_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
AVL33286.1\|4719238_4721800_+\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	97.8
AVL33287.1\|4721796_4722126_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
AVL33288.1\|4722125_4722824_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	4.7e-132	98.3
AVL33289.1\|4722829_4723573_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.1e-146	96.8
AVL33290.1\|4723470_4724142_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	8.1e-105	100.0
AVL33291.1\|4724202_4727700_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	97.6
AVL33292.1\|4727770_4728370_+	Ail/Lom family protein	A5LH44	Enterobacteria_phage	8.2e-109	97.5
AVL34004.1\|4728434_4731509_+\|tail	phage tail protein	U5N099	Enterobacteria_phage	2.5e-68	82.1
AVL33293.1\|4731508_4732093_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	9.2e-105	95.4

DBSCAN-SWA_13

4997011 : 5060389

Escherichia_phage(93.42%)

integrase,tail,capsid,portal,holin,terminase,lysis,bacteriocin

attL 4994536:4994551|attR 5030533:5030548

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4994536:4994551	attL	NA	NA	NA	NA
AVL33525.1\|4997011_4998322_-\|integrase	site-specific integrase	A0A0P0ZGA8	Escherichia_phage	9.2e-254	100.0
AVL33526.1\|4998374_4998659_-	DNA-binding protein	G9L654	Escherichia_phage	9.1e-50	100.0
AVL33527.1\|4998704_4998956_-	DUF4222 domain-containing protein	G9L6F5	Escherichia_phage	8.4e-39	100.0
AVL33528.1\|4998943_4999177_-	hypothetical protein	G9L6F6	Escherichia_phage	1.4e-35	100.0
AVL33529.1\|4999320_4999674_-	hypothetical protein	A0A0P0ZH73	Escherichia_phage	3.5e-59	100.0
AVL33530.1\|4999709_4999922_-	hypothetical protein	A0A0P0ZG72	Escherichia_phage	2.7e-30	100.0
AVL33531.1\|4999881_5000508_-	adenine methylase	A0A0P0ZG10	Escherichia_phage	8.0e-123	100.0
AVL33532.1\|5000504_5000936_-	regulator	A0A2R2Z303	Escherichia_phage	7.3e-75	100.0
AVL33533.1\|5000991_5001630_-	phage antirepressor Ant	A0A0P0ZG08	Escherichia_phage	4.2e-119	100.0
AVL33534.1\|5001985_5002882_-	DUF551 domain-containing protein	A0A0N7KZV3	Escherichia_phage	5.4e-173	100.0
AVL33535.1\|5002884_5003076_-	hypothetical protein	A0A0P0ZG45	Escherichia_phage	3.3e-27	100.0
AVL33536.1\|5003077_5003485_-	hypothetical protein	A0A125RPT9	Escherichia_phage	1.3e-70	100.0
AVL33537.1\|5003481_5004207_-	hypothetical protein	A0A0P0ZFU9	Escherichia_phage	3.3e-128	100.0
AVL33538.1\|5004357_5004753_-	hypothetical protein	A0A0P0ZG44	Escherichia_phage	1.1e-69	100.0
AVL33539.1\|5004829_5005651_-	DUF2303 domain-containing protein	A0A2R2Z323	Escherichia_phage	2.3e-149	100.0
AVL33540.1\|5005714_5006062_-	hypothetical protein	A0A0P0ZGH3	Escherichia_phage	5.9e-59	100.0
AVL33541.1\|5006136_5006724_-	DUF669 domain-containing protein	A0A0N7KZV4	Escherichia_phage	1.2e-107	100.0
AVL33542.1\|5006723_5007413_-	exonuclease	A0A0P0ZFI7	Escherichia_phage	3.5e-135	100.0
AVL33543.1\|5007409_5008360_-	recombinase RecT	A0A0P0ZFY9	Escherichia_phage	1.1e-179	100.0
AVL33544.1\|5008376_5008658_-	host nuclease inhibitor GamL	A0A0P0ZFG3	Escherichia_phage	1.1e-47	100.0
AVL33545.1\|5008678_5008960_-	AbrB family transcriptional regulator	A0A0P0ZGC3	Escherichia_phage	3.0e-45	100.0
AVL33546.1\|5008971_5009184_-	cell division inhibitor protein	A0A0P0ZGD1	Escherichia_phage	5.8e-33	100.0
AVL33547.1\|5009254_5009929_-	hypothetical protein	A0A0P0ZGP9	Escherichia_phage	1.3e-123	100.0
AVL33548.1\|5010084_5010279_+	hypothetical protein	A0A0N7KZV5	Escherichia_phage	1.3e-31	100.0
AVL34014.1\|5010184_5010832_-	hypothetical protein	A0A0P0ZG86	Escherichia_phage	4.3e-119	100.0
AVL33549.1\|5011586_5012540_-	restriction endonuclease	A0A0P0ZG22	Escherichia_phage	7.0e-187	100.0
AVL33550.1\|5012536_5014006_-	SAM-dependent methyltransferase	A0A2R2Z316	Escherichia_phage	3.5e-286	100.0
AVL33551.1\|5014100_5014814_-	LexA family transcriptional repressor	A0A2R2X2B0	Escherichia_phage	6.3e-132	100.0
AVL33552.1\|5014909_5015113_+	Cro/Cl family transcriptional regulator	A0A2R2Z333	Escherichia_phage	2.0e-30	100.0
AVL33553.1\|5015283_5015478_+	hypothetical protein	NA	NA	NA	NA
AVL33554.1\|5015644_5016022_+	hypothetical protein	A0A2R2Z329	Escherichia_phage	4.0e-61	100.0
AVL33555.1\|5016015_5017536_+	ATP-dependent helicase	A0A0N7KZV6	Escherichia_phage	1.4e-306	100.0
AVL33556.1\|5017525_5018497_+	DNA primase	A0A0P0ZFY3	Escherichia_phage	6.5e-196	100.0
AVL33557.1\|5018496_5018946_+	DUF1367 domain-containing protein	A0A0P0ZFW0	Escherichia_phage	7.6e-83	100.0
AVL33558.1\|5018953_5019517_+	recombination protein NinG	A0A0P0ZG59	Escherichia_phage	8.9e-105	100.0
AVL33559.1\|5019513_5019708_+	protein ninH	A0A0P0ZGE1	Escherichia_phage	8.4e-31	100.0
AVL33560.1\|5019700_5020135_+	antitermination protein	A0A0P0ZGJ3	Escherichia_phage	4.8e-82	100.0
AVL33561.1\|5020123_5020369_-	hypothetical protein	A0A0P0ZGS0	Escherichia_phage	5.0e-36	100.0
AVL33562.1\|5020383_5020536_+	DNA methylase	A0A2R2Z327	Escherichia_phage	4.0e-20	100.0
AVL33563.1\|5020918_5021878_+	Shiga toxin Stx2 subunit A	Q776Q3	Enterobacteria_phage	5.6e-176	100.0
AVL33564.1\|5021889_5022159_+	Shiga toxin Stx2 subunit B	A0A2R2Z326	Escherichia_phage	1.2e-43	100.0
AVL33565.1\|5022644_5024582_+	DUF1737 domain-containing protein	A0A0P0ZGE0	Escherichia_phage	0.0e+00	100.0
AVL33566.1\|5024718_5024898_+	DUF1378 domain-containing protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
AVL33567.1\|5024938_5025184_+	DUF826 domain-containing protein	A0A0P0ZGR2	Escherichia_phage	8.8e-17	100.0
AVL33568.1\|5025261_5025477_+\|holin	holin	A0A2R2Z340	Escherichia_phage	1.2e-33	100.0
AVL33569.1\|5025481_5026015_+	lysozyme	A0A0P0ZGA2	Escherichia_phage	5.1e-102	100.0
AVL33570.1\|5026288_5026858_+	hypothetical protein	A0A0N7KZV8	Escherichia_phage	1.8e-105	100.0
AVL33571.1\|5027018_5027447_+\|lysis	lysis protein	A0A0P0ZFH2	Escherichia_phage	1.9e-70	100.0
AVL33572.1\|5027649_5028201_+	Rha family transcriptional regulator	A0A0P0ZFJ1	Escherichia_phage	4.5e-101	100.0
AVL33573.1\|5028493_5029300_+\|terminase	terminase	A0A0P0ZG40	Escherichia_phage	1.3e-133	100.0
AVL33574.1\|5029280_5030987_+\|terminase	terminase	A0A2R2Z350	Escherichia_phage	0.0e+00	100.0
5030533:5030548	attR	NA	NA	NA	NA
AVL33575.1\|5030986_5033131_+\|portal	portal protein	A0A0P0ZG74	Escherichia_phage	0.0e+00	100.0
AVL33576.1\|5033288_5034296_+	hypothetical protein	A0A2R2Z355	Escherichia_phage	2.3e-180	100.0
AVL33577.1\|5034319_5035534_+\|capsid	N4-gp56 family major capsid protein	A0A2R2Z358	Escherichia_phage	1.3e-233	100.0
AVL33578.1\|5035589_5035979_+	hypothetical protein	A0A2R2Z353	Escherichia_phage	9.9e-63	100.0
AVL33579.1\|5036028_5036490_+	hypothetical protein	A0A0P0ZG73	Escherichia_phage	6.0e-75	100.0
AVL33580.1\|5036473_5037037_+	hypothetical protein	A0A2R2Z349	Escherichia_phage	3.2e-102	100.0
AVL33581.1\|5037036_5037687_+	hypothetical protein	A0A0P0ZGL1	Escherichia_phage	4.6e-121	100.0
AVL33582.1\|5037683_5039876_+\|tail	phage tail protein	A0A0H4IU95	Shigella_phage	1.9e-86	98.0
AVL33583.1\|5039962_5040475_+	hypothetical protein	A0A0P0ZFL3	Escherichia_phage	1.2e-92	100.0
AVL34015.1\|5040708_5042334_+	hypothetical protein	A0A0P0ZG21	Escherichia_phage	0.0e+00	100.0
AVL33584.1\|5042330_5043599_+	host specificity protein J	A0A2R2Z364	Escherichia_phage	4.9e-220	100.0
AVL33585.1\|5043613_5043892_+	outer membrane protein	A0A2R2Z367	Escherichia_phage	1.1e-50	100.0
AVL33586.1\|5043897_5044515_+	hypothetical protein	A0A2R2Z362	Escherichia_phage	3.3e-121	99.5
AVL33587.1\|5044605_5045340_+	outer membrane protein	A0A2R2Z365	Escherichia_phage	1.3e-135	100.0
AVL33588.1\|5045270_5045516_-	hypothetical protein	Q7Y2U2	Escherichia_phage	6.2e-39	98.8
AVL33589.1\|5045572_5045713_+	Hok/Gef family protein	A0A2R2X2B4	Escherichia_phage	3.1e-19	100.0
AVL33590.1\|5045769_5046171_+	hypothetical protein	A0A2R2Z359	Escherichia_phage	3.7e-73	100.0
AVL33591.1\|5046264_5046921_+	hypothetical protein	A0A0P0ZGB7	Escherichia_phage	2.4e-109	100.0
AVL33592.1\|5046923_5047370_+	hypothetical protein	A0A2R2Z357	Escherichia_phage	6.2e-77	100.0
AVL33593.1\|5047379_5047631_+\|bacteriocin	bacteriocin	A0A2R2Z351	Escherichia_phage	7.9e-13	100.0
AVL33594.1\|5047641_5048907_+	hypothetical protein	A0A0P0ZFI5	Escherichia_phage	2.4e-206	100.0
AVL33595.1\|5048976_5057358_+	hypothetical protein	A0A0P0ZFK4	Escherichia_phage	0.0e+00	100.0
AVL33596.1\|5057695_5057923_+	hypothetical protein	Q7Y2P9	Escherichia_phage	2.0e-23	92.7
AVL33597.1\|5058126_5058357_+	hypothetical protein	NA	NA	NA	NA
AVL33598.1\|5058289_5058463_+	stress-induced protein	Q9KX95	Enterobacteria_phage	4.9e-06	96.3
AVL33599.1\|5058545_5059874_-	transporter	Q9KX94	Enterobacteria_phage	3.7e-234	99.1
AVL33600.1\|5059894_5060389_-	FMN reductase	Q9KX93	Enterobacteria_phage	1.1e-50	96.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP027392

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 67624

Stx2-converting_phage(21.43%)

integrase,protease,transposase

attL 46333:46347|attR 65463:65477

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL28814.1\|1387_1888_-\|transposase	transposase	A0A1B1P776	Bacillus_phage	2.4e-08	28.2
AVL28815.1\|2323_3352_+	hypothetical protein	NA	NA	NA	NA
AVL28816.1\|3355_3895_+	isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
AVL28817.1\|4709_5690_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	3.4e-184	98.8
AVL28818.1\|7623_8421_-	transcriptional activator AggR	NA	NA	NA	NA
AVL28819.1\|9886_10258_-	hypothetical protein	NA	NA	NA	NA
AVL28820.1\|10551_10707_+	reverse transcriptase	NA	NA	NA	NA
AVL28821.1\|13950_14175_+	hypothetical protein	A0A0N7BTS3	Escherichia_phage	6.4e-06	96.0
AVL28822.1\|14221_14554_+	hypothetical protein	NA	NA	NA	NA
AVL28823.1\|14895_15876_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	99.1
AVL28824.1\|16468_16669_+	hypothetical protein	NA	NA	NA	NA
AVL28825.1\|18190_18838_+\|protease	serine protease	Q9LA58	Enterobacterial_phage	6.1e-33	43.1
AVL28826.1\|18809_19985_+\|protease	serine protease	Q9LA58	Enterobacterial_phage	4.2e-72	46.8
AVL28827.1\|19956_20193_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	2.0e-18	63.8
AVL28828.1\|20249_20342_-\|transposase	IS66 family transposase	NA	NA	NA	NA
AVL28875.1\|20335_20584_-\|transposase	IS3 family transposase	A0A0N7BVE9	Escherichia_phage	1.2e-24	82.4
AVL28829.1\|20963_22094_+	permease	NA	NA	NA	NA
AVL28830.1\|22090_23329_+	hypothetical protein	NA	NA	NA	NA
AVL28831.1\|23408_24047_+	hypothetical protein	NA	NA	NA	NA
AVL28832.1\|24039_24669_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-20	35.4
AVL28833.1\|24685_25897_+	acyltransferase	NA	NA	NA	NA
AVL28834.1\|26871_28005_+\|transposase	IS110 family transposase ISEc45	NA	NA	NA	NA
AVL28835.1\|28114_29683_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.6e-141	59.9
AVL28836.1\|29713_30064_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	3.6e-40	64.7
AVL28837.1\|30060_30498_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	3.4e-19	60.3
AVL28838.1\|31088_34142_-	autotransporter outer membrane beta-barrel domain-containing protein	Q9LA58	Enterobacterial_phage	3.1e-220	43.8
AVL28839.1\|34333_35182_-	hypothetical protein	Q9LA58	Enterobacterial_phage	5.2e-40	38.7
AVL28840.1\|36725_37556_+	DUF945 domain-containing protein	A0A2C9CYF8	Yersinia_phage	2.2e-43	37.5
AVL28876.1\|37873_38476_-	lytic transglycosylase	NA	NA	NA	NA
AVL28841.1\|38806_39190_+	conjugal transfer protein TraM	NA	NA	NA	NA
AVL28842.1\|45123_45261_+	conjugal transfer protein TraI	NA	NA	NA	NA
AVL28843.1\|45280_46027_+	conjugal transfer pilus acetylase TraX	A0A077JBM8	Xanthomonas_phage	3.2e-09	30.9
AVL28844.1\|46081_46642_+	conjugal transfer protein	NA	NA	NA	NA
46333:46347	attL	NA	NA	NA	NA
AVL28845.1\|47300_47597_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	3.4e-31	64.4
AVL28846.1\|47909_49481_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.2e-169	58.5
AVL28847.1\|49500_49848_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
AVL28848.1\|49847_50525_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.3e-21	46.0
AVL28877.1\|51092_51215_+	sugar kinase	Q6QLL3	Human_immunodeficiency_virus	9.0e-15	92.5
AVL28849.1\|51252_52233_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	99.1
AVL28850.1\|52513_52768_+	replication protein	NA	NA	NA	NA
AVL28851.1\|52811_52922_-	replication protein RepA	NA	NA	NA	NA
AVL28878.1\|53005_53080_+	RepA leader peptide Tap	NA	NA	NA	NA
AVL28852.1\|54468_54600_-	replication protein RepA4	NA	NA	NA	NA
AVL28853.1\|54808_55093_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
AVL28854.1\|55092_55368_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AVL28855.1\|55820_55982_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AVL28879.1\|56104_56230_+	transcriptional regulator	NA	NA	NA	NA
AVL28856.1\|56350_57091_+\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	1.6e-24	57.6
AVL28857.1\|57369_58347_-	replication initiation protein	J9Q7H0	Salmonella_phage	8.8e-100	59.2
AVL28858.1\|58656_59145_-	hypothetical protein	NA	NA	NA	NA
AVL28880.1\|59670_60072_-	PIN domain-containing protein	NA	NA	NA	NA
AVL28859.1\|60095_60326_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
AVL28860.1\|60920_61139_+	plasmid maintenance protein CcdA	NA	NA	NA	NA
AVL28861.1\|61140_61446_+	plasmid maintenance protein CcdB	NA	NA	NA	NA
AVL28862.1\|61446_62253_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	2.7e-54	93.9
AVL28863.1\|62431_63076_+	ParA family protein	NA	NA	NA	NA
AVL28864.1\|63162_63471_+	molecular chaperone GroEL	NA	NA	NA	NA
AVL28865.1\|63884_64865_+	recombinase	A0A0A7NPX4	Enterobacteria_phage	2.2e-79	51.4
AVL28866.1\|64857_65274_+	recombinase	NA	NA	NA	NA
AVL28881.1\|65275_65347_-	DUF4113 domain-containing protein	NA	NA	NA	NA
AVL28867.1\|66548_66926_-	peptidase	A0A1W6JNS2	Morganella_phage	6.1e-25	47.2
65463:65477	attR	NA	NA	NA	NA
AVL28882.1\|67057_67624_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	4.8e-34	45.6

DBSCAN-SWA_2

73621 : 74346

Stx2-converting_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL28883.1\|73621_74002_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	2.7e-65	98.4
AVL28874.1\|73998_74346_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP027395

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP027394

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP027392

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection