CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP027409	Salmonella enterica subsp. enterica strain FDAARGOS_317 plasmid unnamed, complete sequence	0 crisprs	cas14j,DEDDh	0	0	2	0
CP027410	Salmonella enterica subsp. enterica strain FDAARGOS_317 chromosome, complete genome	0 crisprs	DEDDh,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,RT	0	0	13	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

55133 : 130161

Salmonella_phage(21.74%)

integrase,transposase

attL 80658:80674|attR 133311:133324

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL55206.1\|55133_55814_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-28	36.4
AVL55207.1\|55958_56147_-	hypothetical protein	NA	NA	NA	NA
AVL55208.1\|56195_56552_-	hypothetical protein	NA	NA	NA	NA
AVL55209.1\|56544_57015_-	hypothetical protein	NA	NA	NA	NA
AVL55210.1\|57525_57948_+	protein SamA	A0A1W6JNS2	Morganella_phage	1.0e-28	51.6
AVL55211.1\|57947_59222_+	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	3.9e-156	64.9
AVL55212.1\|59303_60281_-	chromosome partitioning protein ParB	A0A1B0V750	Salmonella_phage	5.2e-84	53.2
AVL55213.1\|60277_61483_-	ParA family protein	A0A077SL49	Escherichia_phage	1.5e-162	69.3
AVL55214.1\|61897_62839_+\|transposase	ISNCY family transposase	Q2A0A7	Sodalis_phage	2.0e-72	54.3
AVL55215.1\|62870_63437_-	DUF2913 domain-containing protein	NA	NA	NA	NA
AVL55216.1\|63493_63829_-	hypothetical protein	NA	NA	NA	NA
AVL55385.1\|64012_64429_-	hypothetical protein	O64348	Escherichia_phage	8.2e-07	42.9
AVL55217.1\|64514_65630_-	hypothetical protein	NA	NA	NA	NA
AVL55218.1\|65888_66377_+	cytoplasmic protein	NA	NA	NA	NA
AVL55219.1\|67031_67772_+	carbonic anhydrase	NA	NA	NA	NA
AVL55220.1\|67978_68539_+	recombinase family protein	A0A1W5LU24	Ralstonia_phage	1.3e-31	42.7
AVL55221.1\|68522_70187_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AVL55222.1\|70119_71145_+	AAA family ATPase	NA	NA	NA	NA
AVL55223.1\|71333_72371_-\|transposase	IS630 family transposase	NA	NA	NA	NA
AVL55224.1\|72979_73873_+	virulence genes transcriptional activator SpvR	NA	NA	NA	NA
AVL55225.1\|74046_74211_+	lysozyme	A0A0M4R365	Salmonella_phage	3.3e-12	63.0
AVL55226.1\|74384_75152_+	virulence protein SpvA	NA	NA	NA	NA
AVL55227.1\|75333_77109_+	SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB	NA	NA	NA	NA
AVL55228.1\|77389_78115_+	type III secretion system effector phosphothreonine lyase SpvC	NA	NA	NA	NA
AVL55229.1\|78375_79026_+	SPI-2 type III secretion system effector cysteine hydrolase SpvD	NA	NA	NA	NA
AVL55230.1\|79633_79984_+\|transposase	transposase	A0A077SLN2	Escherichia_phage	1.9e-44	80.5
AVL55231.1\|80050_80611_-	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA
80658:80674	attL	NA	NA	NA	NA
AVL55232.1\|81330_81816_-	hypothetical protein	NA	NA	NA	NA
80658:80674	attL	NA	NA	NA	NA
AVL55233.1\|81809_82319_-	CaiF/GrlA family transcriptional regulator	NA	NA	NA	NA
AVL55386.1\|82322_82472_-	diguanylate phosphodiesterase	NA	NA	NA	NA
AVL55234.1\|82484_83036_-	EAL domain-containing protein	NA	NA	NA	NA
AVL55235.1\|83044_83827_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	1.6e-51	91.1
AVL55236.1\|83861_84383_-	cytoplasmic protein	NA	NA	NA	NA
AVL55237.1\|84379_84670_-	cytoplasmic protein	NA	NA	NA	NA
AVL55238.1\|84671_84977_-	plasmid maintenance protein CcdB	NA	NA	NA	NA
AVL55239.1\|84978_85197_-	plasmid maintenance protein CcdA	NA	NA	NA	NA
AVL55240.1\|85872_86394_+	hypothetical protein	NA	NA	NA	NA
AVL55241.1\|86877_87174_+	cytoplasmic protein	NA	NA	NA	NA
AVL55242.1\|87679_88657_+	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	1.8e-100	59.8
AVL55243.1\|90279_90480_+	hypothetical protein	NA	NA	NA	NA
AVL55244.1\|90628_90931_+	transcriptional regulator	NA	NA	NA	NA
AVL55245.1\|91205_91724_+	fimbrial protein	NA	NA	NA	NA
AVL55246.1\|91951_94360_+	outer membrane usher protein PefC	NA	NA	NA	NA
AVL55247.1\|94352_95045_+	fimbrial chaperone protein	NA	NA	NA	NA
AVL55248.1\|95059_95617_+	hypothetical protein	NA	NA	NA	NA
AVL55249.1\|95869_96745_+	hypothetical protein	NA	NA	NA	NA
AVL55250.1\|97176_97389_+	regulator	NA	NA	NA	NA
AVL55251.1\|97373_97724_+	LuxR family transcriptional regulator	NA	NA	NA	NA
AVL55252.1\|97968_98622_+	thiol:disulfide interchange protein	NA	NA	NA	NA
AVL55253.1\|98754_99654_+	hypothetical protein	NA	NA	NA	NA
AVL55254.1\|99743_100301_+	hypothetical protein	Q9EV15	Enterobacteria_phage	4.5e-24	38.5
AVL55255.1\|100737_102387_+\|transposase	transposase	NA	NA	NA	NA
AVL55256.1\|102389_103250_+\|transposase	transposase	NA	NA	NA	NA
AVL55257.1\|103351_104875_+\|transposase	IS21 family transposase IS1326	A0A2L1IVA1	Escherichia_phage	1.2e-15	24.2
AVL55387.1\|104864_105647_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	1.3e-32	34.6
AVL55258.1\|105822_106323_-	N-acetyltransferase	NA	NA	NA	NA
AVL55259.1\|106341_106521_+	hypothetical protein	NA	NA	NA	NA
AVL55260.1\|106450_107290_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
107134:107150	attR	NA	NA	NA	NA
AVL55261.1\|107283_107631_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
107134:107150	attR	NA	NA	NA	NA
AVL55262.1\|107848_109084_-\|transposase	IS256 family transposase ISEc58	A0A218MNI5	uncultured_virus	2.8e-42	42.8
AVL55263.1\|109196_109391_+	hypothetical protein	NA	NA	NA	NA
AVL55264.1\|109351_110881_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AVL55265.1\|111069_112707_-	molecular chaperone GroEL	A0A240F779	uncultured_virus	1.8e-174	60.6
AVL55388.1\|112762_113083_-	co-chaperone GroES	A0A221S4G8	uncultured_virus	1.0e-17	47.9
AVL55389.1\|113289_114114_-	aminoglycoside N-acetyltransferase AAC(3)-VIa	NA	NA	NA	NA
AVL55390.1\|114355_115147_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
AVL55266.1\|115295_116309_+\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AVL55267.1\|116247_116862_+	DUF3330 domain-containing protein	NA	NA	NA	NA
AVL55268.1\|116987_117548_+	DNA resolvase	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
AVL55269.1\|117550_120517_+\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
AVL55391.1\|120525_120942_+	hypothetical protein	NA	NA	NA	NA
AVL55270.1\|121076_121310_+	hypothetical protein	NA	NA	NA	NA
AVL55271.1\|121418_121685_-	hypothetical protein	NA	NA	NA	NA
AVL55392.1\|121684_122179_-	hypothetical protein	NA	NA	NA	NA
AVL55272.1\|122234_122837_-	proQ/FINO family protein	NA	NA	NA	NA
AVL55273.1\|123190_124537_+	hypothetical protein	NA	NA	NA	NA
AVL55274.1\|124815_126696_+	colicin	NA	NA	NA	NA
AVL55275.1\|126713_127061_-	colicin transporter	NA	NA	NA	NA
AVL55276.1\|127179_127527_+	hypothetical protein	NA	NA	NA	NA
AVL55277.1\|127544_128135_-	hypothetical protein	NA	NA	NA	NA
AVL55278.1\|128131_128392_-	hypothetical protein	NA	NA	NA	NA
AVL55279.1\|128960_129374_+	hypothetical protein	NA	NA	NA	NA
AVL55280.1\|129375_130161_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	4.0e-55	96.5
133311:133324	attR	NA	NA	NA	NA

DBSCAN-SWA_2

185420 : 217068

Escherichia_phage(28.57%)

integrase,transposase

attL 177922:177935|attR 200740:200753

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
177922:177935	attL	NA	NA	NA	NA
AVL55346.1\|185420_186575_-\|integrase	integrase	B5WZU7	Pseudomonas_phage	1.3e-46	43.0
AVL55347.1\|188163_188820_-	prepilin peptidase	NA	NA	NA	NA
AVL55348.1\|188804_189365_-	lytic transglycosylase	NA	NA	NA	NA
AVL55349.1\|189374_189989_-	pilus assembly protein PilX	NA	NA	NA	NA
AVL55350.1\|190006_191104_-	pilus assembly protein PilR	NA	NA	NA	NA
AVL55351.1\|191116_192670_-	ATP-binding protein	NA	NA	NA	NA
AVL55352.1\|192680_193133_-	type IV pilus biogenesis protein PilP	NA	NA	NA	NA
AVL55353.1\|193119_194415_-	pilus assembly protein PilO	NA	NA	NA	NA
AVL55354.1\|194407_196090_-	PilN family type IVB pilus formation outer membrane protein	NA	NA	NA	NA
AVL55355.1\|196103_196541_-	pilus assembly protein PilP	NA	NA	NA	NA
AVL55356.1\|196540_197608_-	pili assembly chaperone	NA	NA	NA	NA
AVL55357.1\|197641_198232_-	pili assembly chaperone	NA	NA	NA	NA
AVL55358.1\|198281_198734_-	pili assembly chaperone	NA	NA	NA	NA
AVL55359.1\|198776_199031_-	pilus assembly protein	NA	NA	NA	NA
AVL55360.1\|199298_199865_-	conjugal transfer protein TraD	NA	NA	NA	NA
AVL55361.1\|199878_200562_-	conjugal transfer protein TraC	NA	NA	NA	NA
AVL55362.1\|200664_200844_+	hypothetical protein	NA	NA	NA	NA
200740:200753	attR	NA	NA	NA	NA
AVL55396.1\|200815_201349_-	transcription termination factor NusG	NA	NA	NA	NA
AVL55363.1\|201354_201477_-	conjugal transfer protein TraA	NA	NA	NA	NA
AVL55364.1\|201790_202027_-	conjugal transfer protein TraA	NA	NA	NA	NA
AVL55365.1\|201995_202259_-	hypothetical protein	Q7M2A7	Enterobacteria_phage	6.1e-08	54.0
AVL55366.1\|202732_202939_+	hypothetical protein	NA	NA	NA	NA
AVL55398.1\|202935_203256_-	hypothetical protein	NA	NA	NA	NA
AVL55397.1\|203231_204263_+	replication initiation protein	NA	NA	NA	NA
AVL55367.1\|205171_205441_+	hypothetical protein	NA	NA	NA	NA
AVL55368.1\|205437_205719_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AVL55369.1\|205758_206607_+	3'-5' exonuclease	K7RFY5	Vibrio_phage	3.5e-28	40.1
AVL55370.1\|206924_208574_+\|transposase	transposase	NA	NA	NA	NA
AVL55371.1\|208576_209437_+\|transposase	transposase	NA	NA	NA	NA
AVL55372.1\|209538_211062_+\|transposase	IS21 family transposase IS1326	A0A2L1IVA1	Escherichia_phage	1.2e-15	24.2
AVL55399.1\|211051_211834_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	1.3e-32	34.6
AVL55373.1\|212009_212510_-	N-acetyltransferase	NA	NA	NA	NA
AVL55374.1\|212528_212708_+	hypothetical protein	NA	NA	NA	NA
AVL55375.1\|212637_213477_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AVL55376.1\|213470_213818_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AVL55377.1\|214035_215271_-\|transposase	IS256 family transposase ISEc58	A0A218MNI5	uncultured_virus	2.8e-42	42.8
AVL55378.1\|215383_215578_+	hypothetical protein	NA	NA	NA	NA
AVL55379.1\|215538_217068_-\|transposase	IS91 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP027410

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

739244 : 784488

Enterobacteria_phage(79.41%)

terminase,tail,protease,portal,lysis,integrase,coat

attL 730014:730030|attR 792783:792799

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
730014:730030	attL	NA	NA	NA	NA
AVL56036.1\|739244_740297_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	1.7e-112	58.5
AVL56037.1\|740579_741683_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	6.9e-61	39.8
AVL56038.1\|741694_742945_+	gamma-glutamyl-phosphate reductase	A0A1X9I5D4	Streptococcus_phage	1.6e-98	47.5
AVL60066.1\|743150_743819_-\|integrase	site-specific integrase	Q76H30	Enterobacteria_phage	4.7e-129	100.0
AVL56039.1\|744190_744541_-	DNA-binding protein	Q76H29	Enterobacteria_phage	3.7e-61	100.0
AVL56040.1\|744752_745037_-	ASCH domain-containing protein	Q76H28	Enterobacteria_phage	1.4e-50	100.0
AVL56041.1\|745029_745314_-	DUF4752 domain-containing protein	Q76H46	Enterobacteria_phage	1.6e-49	100.0
AVL56042.1\|745313_745958_-	DUF551 domain-containing protein	Q76H45	Enterobacteria_phage	1.4e-122	99.5
AVL56043.1\|745944_746178_-	hypothetical protein	NA	NA	NA	NA
AVL56044.1\|746174_746684_-	hypothetical protein	Q76H44	Enterobacteria_phage	2.8e-89	100.0
AVL56045.1\|746680_746851_-	DUF2737 domain-containing protein	Q76H43	Enterobacteria_phage	1.6e-25	100.0
AVL56046.1\|746861_747155_-	RecBCD nuclease inhibitor	Q76H42	Enterobacteria_phage	1.4e-48	100.0
AVL56047.1\|747201_747486_-	sigma-70 family RNA polymerase sigma factor	Q76H41	Enterobacteria_phage	1.4e-45	100.0
AVL56048.1\|747485_748193_-	recombinase	Q76H40	Enterobacteria_phage	3.1e-139	100.0
AVL56049.1\|748322_748511_-	protein kil	I6S647	Salmonella_phage	3.7e-31	100.0
AVL56050.1\|748491_748650_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q76H38	Enterobacteria_phage	2.4e-23	100.0
AVL56051.1\|748734_749049_-	superinfection exclusion protein	Q76H37	Enterobacteria_phage	1.5e-56	100.0
AVL56052.1\|749324_749612_-	hypothetical protein	Q76H36	Enterobacteria_phage	2.7e-49	100.0
AVL56053.1\|749645_750290_-	pentapeptide repeat-containing protein	Q76H35	Enterobacteria_phage	6.5e-51	100.0
AVL56054.1\|750373_750568_-	restriction endonuclease	Q76H34	Enterobacteria_phage	1.9e-30	100.0
AVL56055.1\|750781_751369_+	superinfection exclusion protein B	Q76H59	Enterobacteria_phage	1.4e-100	100.0
AVL56056.1\|751381_751684_-	regulator	Q76H58	Enterobacteria_phage	9.7e-50	100.0
AVL56057.1\|752047_752251_+	hypothetical protein	A0A2H5BFH9	Salmonella_phage	2.0e-27	100.0
AVL56058.1\|752289_753369_-	hypothetical protein	A0A192Y6S0	Salmonella_phage	1.5e-193	100.0
AVL56059.1\|753533_754223_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.3e-126	100.0
AVL56060.1\|754333_754549_+	transcriptional regulator	Q76H55	Enterobacteria_phage	1.3e-32	100.0
AVL56061.1\|754659_754941_+	hypothetical protein	Q76H54	Enterobacteria_phage	4.3e-44	100.0
AVL56062.1\|755123_755945_+	replication of DNA	Q76H52	Enterobacteria_phage	5.2e-154	100.0
AVL56063.1\|755941_757318_+	replicative DNA helicase	Q76H51	Enterobacteria_phage	1.9e-254	100.0
AVL56064.1\|757314_757584_+	hypothetical protein	Q76H50	Enterobacteria_phage	4.9e-45	100.0
AVL56065.1\|757639_758095_+	recombination protein NinB	Q76H49	Enterobacteria_phage	4.7e-80	100.0
AVL56066.1\|758091_758265_+	protein ninD	Q76H74	Enterobacteria_phage	2.3e-32	100.0
AVL56067.1\|758231_758408_+	NinE family protein	Q76H73	Enterobacteria_phage	1.0e-27	100.0
AVL56068.1\|758410_758752_+	DUF2591 domain-containing protein	Q76H72	Enterobacteria_phage	2.1e-64	100.0
AVL56069.1\|758744_758921_+	protein ninF	Q76H71	Enterobacteria_phage	6.7e-27	100.0
AVL56070.1\|758913_759525_+	recombination protein NinG	Q76H70	Enterobacteria_phage	7.9e-99	100.0
AVL56071.1\|759521_759746_+	protein ninY	Q76H69	Enterobacteria_phage	6.3e-38	100.0
AVL56072.1\|759742_759946_+	protein ninH	I6RSQ6	Salmonella_phage	7.2e-33	100.0
AVL56073.1\|759926_760106_+	hypothetical protein	Q76H67	Enterobacteria_phage	1.9e-24	100.0
AVL56074.1\|760102_760876_+	antitermination protein	Q76H66	Enterobacteria_phage	8.1e-133	100.0
AVL56075.1\|760988_761222_+	hypothetical protein	M1E3N9	Enterobacteria_phage	1.1e-21	87.0
AVL56076.1\|761306_761510_+	hypothetical protein	I6R0S9	Salmonella_phage	1.1e-33	100.0
AVL60067.1\|761487_761985_+	lysozyme	B8K1G9	Salmonella_phage	4.5e-92	100.0
AVL56077.1\|761981_762449_+\|lysis	lysis protein	Q76H63	Enterobacteria_phage	1.7e-77	100.0
AVL56078.1\|762483_762708_+	hypothetical protein	A0A1V0E5I0	Salmonella_phage	3.6e-25	88.7
AVL56079.1\|762661_763192_+	KilA-N domain-containing protein	Q76H61	Enterobacteria_phage	1.3e-94	100.0
AVL56080.1\|763414_763657_+	DUF2560 domain-containing protein	Q76H60	Enterobacteria_phage	1.7e-33	100.0
AVL56081.1\|763660_764050_+	hypothetical protein	Q76H27	Enterobacteria_phage	3.9e-75	100.0
AVL56082.1\|764049_764454_+	Decoration protein	Q76H26	Enterobacteria_phage	1.1e-67	100.0
AVL56083.1\|764457_764946_+	DNA-packaging protein	Q76H25	Enterobacteria_phage	1.0e-88	100.0
AVL56084.1\|764923_766423_+\|terminase	terminase	Q76H24	Enterobacteria_phage	2.8e-307	100.0
AVL56085.1\|766422_768600_+\|portal	portal protein	Q76H23	Enterobacteria_phage	0.0e+00	100.0
AVL56086.1\|768613_769525_+	scaffolding protein	Q76H22	Enterobacteria_phage	1.5e-162	100.0
AVL56087.1\|769524_770817_+\|coat	coat protein	Q76H21	Enterobacteria_phage	1.1e-243	100.0
AVL56088.1\|770857_771418_+	hypothetical protein	C6ZR11	Salmonella_phage	9.8e-104	100.0
AVL56089.1\|771401_771902_+	hypothetical protein	Q76H19	Enterobacteria_phage	4.2e-90	100.0
AVL56090.1\|771861_773280_+	hypothetical protein	Q76H18	Enterobacteria_phage	6.4e-277	100.0
AVL56091.1\|773283_773985_+\|tail	phage tail protein	Q76H17	Enterobacteria_phage	1.7e-76	100.0
AVL56092.1\|773984_774440_+	hypothetical protein	Q76H16	Enterobacteria_phage	1.8e-87	100.0
AVL56093.1\|774442_775132_+	DNA transfer protein	A0A2H5BFK5	Salmonella_phage	2.9e-118	100.0
AVL56094.1\|775142_776579_+	DNA transfer protein	Q76H14	Enterobacteria_phage	1.5e-244	99.8
AVL56095.1\|776578_778555_+	DNA transfer protein	Q76H13	Enterobacteria_phage	0.0e+00	100.0
AVL56096.1\|778693_778987_+	hypothetical protein	Q76H12	Enterobacteria_phage	3.2e-50	100.0
AVL56097.1\|779007_779256_-	Arc family DNA-binding protein	Q76H48	Enterobacteria_phage	1.8e-38	100.0
AVL56098.1\|779391_781395_+	endorhamnosidase	Q76H47	Enterobacteria_phage	0.0e+00	100.0
AVL56099.1\|781453_782911_-	hypothetical protein	A8CG94	Salmonella_phage	1.3e-240	100.0
AVL56100.1\|782900_783833_-	glycosyltransferase	A8CG95	Salmonella_phage	5.5e-176	100.0
AVL56101.1\|783829_784192_-	GtrA family protein	A0A192Y6N5	Salmonella_phage	5.0e-61	100.0
AVL56102.1\|784308_784488_+	hypothetical protein	M1E3P7	Enterobacteria_phage	4.3e-13	92.3
792783:792799	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1377130 : 1385862

Dickeya_phage(14.29%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL56641.1\|1377130_1378249_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9
AVL56642.1\|1378245_1380192_+	macrolide ABC transporter permease/ATP-binding protein MacB	G9BWD6	Planktothrix_phage	2.0e-39	43.1
AVL56643.1\|1380172_1380367_+	hypothetical protein	NA	NA	NA	NA
AVL56644.1\|1380321_1380543_-	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
AVL56645.1\|1380866_1381187_+\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
AVL56646.1\|1381217_1383494_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
AVL56647.1\|1383546_1383729_+	hypothetical protein	NA	NA	NA	NA
AVL56648.1\|1383685_1384144_+\|transposase	IS200/IS605 family transposase IS200F	A0A1S5RHE3	Helicobacter_phage	5.1e-10	33.9
AVL56649.1\|1384606_1385862_-\|transposase	IS3-like element ISSen1 family transposase	Q6H9S3	Enterobacteria_phage	5.4e-17	33.9

DBSCAN-SWA_3

1422579 : 1534734

113

Salmonella_phage(41.38%)

terminase,tail,protease,holin,lysis,portal,integrase,tRNA

attL 1438834:1438853|attR 1510622:1510641

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL56676.1\|1422579_1423341_+\|protease	metalloprotease	NA	NA	NA	NA
AVL56677.1\|1423513_1424197_+	cytidylate kinase	NA	NA	NA	NA
AVL56678.1\|1424310_1425984_+	30S ribosomal protein S1	NA	NA	NA	NA
AVL56679.1\|1426139_1426424_+	integration host factor subunit beta	A7KV42	Bacillus_phage	4.1e-10	40.2
AVL56680.1\|1426653_1428918_+	ComEC family protein	Q332C0	Clostridium_botulinum_C_phage	8.8e-10	22.5
AVL56681.1\|1428954_1430703_+	lipid A export ATP-binding/permease MsbA	W8CYL7	Bacillus_phage	3.2e-60	30.5
AVL56682.1\|1430699_1431677_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
AVL56683.1\|1431720_1432953_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
AVL56684.1\|1433004_1433187_+	hypothetical protein	NA	NA	NA	NA
AVL56685.1\|1433183_1433930_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AVL56686.1\|1434140_1435034_+	hypothetical protein	NA	NA	NA	NA
AVL56687.1\|1435013_1435790_-	envelope biogenesis factor ElyC	NA	NA	NA	NA
AVL56688.1\|1435925_1436729_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
AVL56689.1\|1436721_1438044_+	chromosome partition protein MukF	NA	NA	NA	NA
AVL56690.1\|1438024_1438729_+	chromosome partition protein MukE	NA	NA	NA	NA
AVL56691.1\|1438728_1443195_+	chromosome partition protein MukB	NA	NA	NA	NA
1438834:1438853	attL	NA	NA	NA	NA
AVL56692.1\|1443539_1445381_+	L,D-transpeptidase	NA	NA	NA	NA
AVL56693.1\|1445640_1446189_+	DUF882 domain-containing protein	A0A0K1LKR7	Rhodobacter_phage	1.2e-05	33.7
AVL56694.1\|1446216_1446864_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
AVL56695.1\|1446925_1448116_-	aspartate aminotransferase	NA	NA	NA	NA
AVL56696.1\|1448300_1449392_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	2.2e-99	51.7
AVL56697.1\|1449998_1451399_-\|tRNA	asparagine--tRNA ligase	A0A167RLM0	Powai_lake_megavirus	4.5e-81	35.1
AVL56698.1\|1451599_1452061_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AVL56699.1\|1452057_1452291_-	hypothetical protein	NA	NA	NA	NA
AVL56700.1\|1452377_1453592_+	PLP-dependent lyase/thiolase	NA	NA	NA	NA
AVL56701.1\|1455349_1456552_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
AVL56702.1\|1456746_1458039_-\|integrase	integrase	S4TSP2	Salmonella_phage	1.0e-252	99.8
AVL56703.1\|1458083_1458332_-	excisionase	S4TND0	Salmonella_phage	4.7e-42	100.0
AVL56704.1\|1458372_1458612_-	DUF4060 domain-containing protein	S4TR31	Salmonella_phage	2.0e-37	100.0
AVL56705.1\|1458654_1459812_-	enterohemolysin	S4TTE8	Salmonella_phage	1.6e-217	100.0
AVL56706.1\|1459774_1462660_-	exodeoxyribonuclease	H6WRX1	Salmonella_phage	0.0e+00	97.3
AVL56707.1\|1462786_1463086_-	DNA breaking-rejoining protein	S4TSN6	Salmonella_phage	8.1e-49	84.5
AVL56708.1\|1463107_1463266_-	hypothetical protein	H6WRX3	Salmonella_phage	1.2e-22	98.1
AVL56709.1\|1463258_1463519_-	hypothetical protein	NA	NA	NA	NA
AVL56710.1\|1463568_1463979_-	transcriptional regulator	A0A1B5FPF4	Escherichia_phage	8.1e-07	42.4
AVL56711.1\|1464098_1464338_+	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	8.3e-12	47.2
AVL56712.1\|1464303_1464678_+	hypothetical protein	S4TTD7	Salmonella_phage	3.9e-64	99.2
AVL56713.1\|1464762_1465746_+	hypothetical protein	H6WRX7	Salmonella_phage	1.9e-163	100.0
AVL56714.1\|1465748_1466498_+	DNA replication protein DnaC	S4TNF5	Salmonella_phage	3.6e-138	99.6
AVL56715.1\|1466508_1466856_+	DNA-binding protein	H6WRX9	Salmonella_phage	5.4e-52	89.6
AVL56716.1\|1466852_1467164_+	hypothetical protein	A0A220NQV2	Salmonella_phage	7.2e-32	97.2
AVL56717.1\|1467241_1467532_+	hypothetical protein	NA	NA	NA	NA
AVL56718.1\|1467823_1468057_+	DinI family protein	H6WRY5	Salmonella_phage	2.1e-36	98.7
AVL56719.1\|1468168_1468390_+	hypothetical protein	NA	NA	NA	NA
AVL56720.1\|1469074_1469281_+	hypothetical protein	S4TNP0	Salmonella_phage	3.5e-35	100.0
AVL56721.1\|1469283_1469895_+	protein NinG	A0A0M4RU10	Salmonella_phage	6.9e-79	91.6
AVL56722.1\|1469891_1470038_+	YlcG family protein	A0A0M5M7B2	Salmonella_phage	4.3e-19	97.9
AVL56723.1\|1470027_1470825_+	antitermination protein	A0A0M4S661	Salmonella_phage	5.2e-151	99.2
AVL56724.1\|1470891_1471209_+	hypothetical protein	NA	NA	NA	NA
AVL56725.1\|1471382_1471508_+	hypothetical protein	NA	NA	NA	NA
AVL56726.1\|1471643_1472093_-	hypothetical protein	NA	NA	NA	NA
AVL56727.1\|1472453_1473140_-\|protease	type III secretion system effector protease GtgA	Q9MBM0	Phage_Gifsy-2	2.1e-132	100.0
AVL60098.1\|1473415_1473745_+\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
AVL56728.1\|1473728_1474181_+	lysozyme	A0A0M4R365	Salmonella_phage	2.3e-79	97.3
AVL60099.1\|1474198_1474678_+\|lysis	lysis protein	Q56118	Enterobacteria_phage	1.4e-55	77.0
AVL56729.1\|1474885_1475419_+	DNA breaking-rejoining protein	A0A291AWV8	Escherichia_phage	1.0e-33	48.1
AVL56730.1\|1475375_1477514_+\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	3.4e-290	72.6
AVL56731.1\|1477510_1477717_+	primosomal replication protein PriB/PriC domain protein	A0A1W6JT66	Pseudomonas_phage	2.9e-05	53.3
AVL60100.1\|1477743_1479261_+\|portal	phage portal protein	A0A291AWU2	Escherichia_phage	1.5e-175	65.1
AVL60101.1\|1479184_1481266_+	peptidase S14	A0A291AWT6	Escherichia_phage	4.8e-265	69.5
AVL56732.1\|1481356_1481680_+	recombinase RecA	K7PLV6	Enterobacteria_phage	7.7e-29	61.3
AVL56733.1\|1481672_1481972_+	ATP-binding protein	K7PH43	Enterobacteria_phage	4.5e-15	45.1
AVL56734.1\|1481952_1482519_+\|tail	phage tail protein	Q9G063	Phage_Gifsy-2	9.5e-14	97.8
AVL56735.1\|1482515_1482917_+\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	1.5e-42	60.9
AVL56736.1\|1482928_1483678_+\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	3.7e-90	68.6
AVL56737.1\|1483723_1484122_+\|tail	phage minor tail protein G	K7PLV8	Enterobacteria_phage	8.6e-30	56.8
AVL56738.1\|1484118_1484448_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	5.0e-23	50.9
AVL60102.1\|1484527_1487515_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	8.2e-266	62.1
AVL56739.1\|1487511_1487844_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	3.3e-35	61.5
AVL56740.1\|1487942_1488440_+	Ail/OmpX	A0A1B0VBR9	Salmonella_phage	1.4e-16	36.6
AVL56741.1\|1488556_1489090_-	superoxide dismutase [Cu-Zn] SodC1	Q9MC02	Salmonella_phage	1.8e-46	54.0
AVL56742.1\|1489179_1489875_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	6.5e-89	66.2
AVL56743.1\|1490519_1491224_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	9.2e-67	62.6
AVL56744.1\|1493141_1494647_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	6.9e-120	63.9
AVL56745.1\|1494685_1494928_+	hypothetical protein	NA	NA	NA	NA
AVL56746.1\|1494981_1497420_+\|tail	phage tail protein	A0A0K2FIZ6	Escherichia_phage	1.7e-91	63.6
AVL56747.1\|1497419_1498001_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.2e-93	88.0
AVL56748.1\|1498476_1499445_+	SPI-2 type III secretion system effector SseI	Q9MBL9	Phage_Gifsy-2	7.9e-194	99.7
AVL56749.1\|1500092_1500719_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.4e-66	63.2
AVL56750.1\|1500787_1501087_-	hypothetical protein	NA	NA	NA	NA
AVL56751.1\|1501071_1501758_-	virulence protein	NA	NA	NA	NA
AVL56752.1\|1502028_1502220_-	DNA-damage-inducible protein I	S4TNM0	Salmonella_phage	6.2e-26	95.2
AVL56753.1\|1502646_1505259_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	6.3e-20	22.6
AVL56754.1\|1505466_1506477_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
AVL56755.1\|1506642_1507185_+	cell division protein ZapC	NA	NA	NA	NA
AVL56756.1\|1507181_1508291_-	MOSC domain-containing protein	NA	NA	NA	NA
AVL56757.1\|1508389_1510498_+	ribosomal RNA large subunit methyltransferase K/L	NA	NA	NA	NA
AVL56758.1\|1510510_1512418_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.4e-53	29.8
1510622:1510641	attR	NA	NA	NA	NA
AVL56759.1\|1512432_1513686_+	paraquat-inducible protein A	NA	NA	NA	NA
AVL56760.1\|1513690_1515331_+	intermembrane transport protein PqiB	NA	NA	NA	NA
AVL56761.1\|1515327_1515891_+	hypothetical protein	NA	NA	NA	NA
AVL56762.1\|1516146_1516314_+	ribosome modulation factor	NA	NA	NA	NA
AVL56763.1\|1516413_1516932_-	beta-hydroxydecanoyl-ACP dehydratase	NA	NA	NA	NA
AVL56764.1\|1517000_1518761_-\|protease	Lon protease family protein	NA	NA	NA	NA
AVL56765.1\|1518946_1519399_+	macrodomain Ter protein	NA	NA	NA	NA
AVL56766.1\|1519470_1520523_-	outer membrane protein A	NA	NA	NA	NA
AVL56767.1\|1520879_1521389_-	cell division inhibitor SulA	NA	NA	NA	NA
AVL56768.1\|1521605_1522211_+	DNA transformation protein	NA	NA	NA	NA
AVL56769.1\|1522197_1524351_-	TIGR01666 family membrane protein	NA	NA	NA	NA
AVL56770.1\|1524369_1524816_-	YccF domain-containing protein	NA	NA	NA	NA
AVL56771.1\|1524939_1526994_+	DNA helicase IV	A7KV33	Bacillus_phage	8.5e-20	27.6
AVL56772.1\|1527029_1527488_-	methylglyoxal synthase	NA	NA	NA	NA
AVL56773.1\|1527582_1528245_-	DUF2057 domain-containing protein	NA	NA	NA	NA
AVL56774.1\|1528415_1528832_+	CoA-binding protein	NA	NA	NA	NA
AVL56775.1\|1528876_1529194_-	heat-shock protein HspQ	NA	NA	NA	NA
AVL56776.1\|1529251_1530463_-	ribosomal RNA large subunit methyltransferase I	NA	NA	NA	NA
AVL56777.1\|1530677_1531226_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
AVL56778.1\|1531251_1532031_+	AraC family transcriptional regulator	NA	NA	NA	NA
AVL56779.1\|1532079_1532361_+	acylphosphatase	NA	NA	NA	NA
AVL56780.1\|1532357_1532687_-	sulfurtransferase TusE	NA	NA	NA	NA
AVL56781.1\|1532773_1533433_-	transmembrane protein	A0A2H4JFM9	uncultured_Caudovirales_phage	2.3e-43	51.9
AVL56782.1\|1533498_1533708_+	hypothetical protein	NA	NA	NA	NA
AVL56783.1\|1534053_1534734_-\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	8.3e-81	70.6

DBSCAN-SWA_4

2276132 : 2326293

Moraxella_phage(14.29%)

tRNA,integrase,tail,protease

attL 2316709:2316731|attR 2326424:2326446

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL57517.1\|2276132_2276828_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
AVL57518.1\|2276885_2278796_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	4.5e-92	32.7
AVL57519.1\|2278926_2279271_+	RidA family protein	NA	NA	NA	NA
AVL57520.1\|2279276_2279456_-	YoaH family protein	NA	NA	NA	NA
AVL57521.1\|2279536_2280901_+	aminodeoxychorismate synthase component I	A0A0B5J984	Pandoravirus	1.9e-44	35.0
AVL57522.1\|2280904_2281483_+	coenzyme A pyrophosphatase	NA	NA	NA	NA
AVL57523.1\|2281746_2283111_+	L-serine ammonia-lyase	NA	NA	NA	NA
AVL57524.1\|2283248_2284850_+	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA
AVL57525.1\|2284871_2286431_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	9.5e-40	44.4
AVL57526.1\|2286418_2286754_-	hypothetical protein	NA	NA	NA	NA
AVL57527.1\|2286903_2287872_+	PTS mannose transporter subunit IIAB	NA	NA	NA	NA
AVL57528.1\|2287924_2288725_+	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA
AVL57529.1\|2288737_2289589_+	PTS mannose transporter subunit IID	NA	NA	NA	NA
AVL57530.1\|2289646_2290105_+	DUF986 domain-containing protein	NA	NA	NA	NA
AVL60133.1\|2290460_2291081_+	manganese efflux pump MntP	NA	NA	NA	NA
AVL57531.1\|2291077_2291887_-	23S rRNA (guanine(745)-N(1))-methyltransferase	NA	NA	NA	NA
AVL57532.1\|2291952_2293698_-	cell division protein FtsI	NA	NA	NA	NA
AVL57533.1\|2293917_2294127_-	cold-shock protein CspC	A0A1W6JNX5	Morganella_phage	1.6e-22	78.1
AVL57534.1\|2294139_2294283_-	DUF2627 domain-containing protein	NA	NA	NA	NA
AVL57535.1\|2294931_2295219_-	hypothetical protein	NA	NA	NA	NA
AVL57536.1\|2295289_2295433_-	PhoP/PhoQ regulator MgrB	NA	NA	NA	NA
AVL57537.1\|2295590_2295830_+	hypothetical protein	NA	NA	NA	NA
AVL57538.1\|2296041_2296833_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
AVL57539.1\|2297008_2298382_+	MFS transporter	NA	NA	NA	NA
AVL57540.1\|2298429_2299311_-\|protease	protease HtpX	NA	NA	NA	NA
AVL57541.1\|2299504_2301553_-\|tail,protease	tail-specific protease	A0A0R6PIZ1	Moraxella_phage	8.0e-87	33.5
AVL57542.1\|2301572_2302259_-	RNA chaperone ProQ	NA	NA	NA	NA
AVL57543.1\|2302356_2302941_-	GAF domain-containing protein	NA	NA	NA	NA
AVL57544.1\|2302982_2304266_+	paraquat-inducible protein A	NA	NA	NA	NA
AVL57545.1\|2304228_2306868_+	MCE family protein	NA	NA	NA	NA
AVL60134.1\|2306945_2308385_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
AVL57546.1\|2308499_2308739_+	DUF1480 domain-containing protein	NA	NA	NA	NA
AVL57547.1\|2308849_2309041_+	DUF1482 domain-containing protein	NA	NA	NA	NA
AVL57548.1\|2309059_2309710_-	serine/threonine-protein phosphatase 1	A0A222YWF0	Escherichia_phage	1.1e-58	51.4
AVL57549.1\|2309933_2310098_-	hypothetical protein	NA	NA	NA	NA
AVL57550.1\|2310382_2311105_-	SPI-1 type III secretion system guanine nucleotide exchange factor SopE2	NA	NA	NA	NA
AVL57551.1\|2311788_2312184_+	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	6.0e-15	32.0
AVL57552.1\|2312513_2312990_+	hypothetical protein	NA	NA	NA	NA
AVL57553.1\|2313377_2313797_-	N-acetyltransferase	NA	NA	NA	NA
AVL57554.1\|2313925_2314120_-	hypothetical protein	NA	NA	NA	NA
AVL57555.1\|2314166_2314436_+	hypothetical protein	Q6UAV5	Klebsiella_phage	1.5e-06	39.0
AVL57556.1\|2314601_2314742_+	hypothetical protein	NA	NA	NA	NA
AVL57557.1\|2316205_2316574_+\|integrase	integrase	K7PHK0	Enterobacteria_phage	5.4e-18	39.8
AVL57558.1\|2316511_2316769_-	hypothetical protein	NA	NA	NA	NA
2316709:2316731	attL	NA	NA	NA	NA
AVL60135.1\|2317059_2317260_-	hypothetical protein	NA	NA	NA	NA
AVL57559.1\|2317877_2318792_+	protein PagO	NA	NA	NA	NA
AVL57560.1\|2318924_2319083_+	hypothetical protein	NA	NA	NA	NA
AVL57561.1\|2319092_2319707_+	disulfide bond formation protein B	NA	NA	NA	NA
AVL57562.1\|2320459_2320726_-	hypothetical protein	NA	NA	NA	NA
AVL57563.1\|2320854_2320980_-	arsenic transporter	NA	NA	NA	NA
AVL57564.1\|2321242_2321359_+\|tail	phage tail protein	NA	NA	NA	NA
AVL57565.1\|2321549_2321750_+	phage virulence factor	NA	NA	NA	NA
AVL57566.1\|2321846_2322728_-\|tail	phage tail protein	A0A0M4RTP2	Salmonella_phage	2.2e-65	76.0
AVL57567.1\|2323200_2323389_+	hypothetical protein	NA	NA	NA	NA
AVL57568.1\|2323453_2323621_+	lytic enzyme	NA	NA	NA	NA
AVL57569.1\|2323877_2324411_-	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	1.4e-11	48.3
AVL57570.1\|2324464_2324695_-	lytic enzyme	Q8HA86	Salmonella_phage	6.1e-28	93.7
AVL60137.1\|2324884_2325379_+	RecE	A0A0U2I1R6	Escherichia_phage	8.2e-22	68.9
AVL60136.1\|2325438_2326293_+\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	3.6e-73	50.9
2326424:2326446	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2331735 : 2375324

Edwardsiella_phage(20.0%)

terminase,tail,lysis,integrase,head,transposase

attL 2331226:2331240|attR 2373164:2373178

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2331226:2331240	attL	NA	NA	NA	NA
AVL57575.1\|2331735_2332311_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	2.9e-95	89.5
AVL57576.1\|2332310_2333762_-	short-chain dehydrogenase	E5G6P0	Salmonella_phage	2.9e-43	71.2
AVL57577.1\|2333751_2334354_-	DUF2612 domain-containing protein	H9C0Y0	Aeromonas_phage	5.9e-30	43.2
AVL57578.1\|2334355_2335597_-	hypothetical protein	A0A077KGW9	Edwardsiella_phage	4.5e-101	49.6
AVL57579.1\|2335593_2335950_-	hypothetical protein	A0A077KCA1	Edwardsiella_phage	1.6e-19	49.1
AVL57580.1\|2335962_2336640_-	oxidoreductase	A0A077KAY0	Edwardsiella_phage	4.6e-31	35.5
AVL57581.1\|2336620_2337490_-	hypothetical protein	A0A077KC17	Edwardsiella_phage	9.1e-32	32.7
AVL57582.1\|2337486_2337789_-	hypothetical protein	A0A077K9U4	Edwardsiella_phage	7.0e-24	49.5
AVL57583.1\|2337788_2338499_-	hypothetical protein	A0A077KGW3	Edwardsiella_phage	6.5e-28	34.6
AVL57584.1\|2338495_2340667_-	transglycosylase	A0A0M4REK7	Salmonella_phage	1.4e-49	67.1
AVL57585.1\|2340650_2340833_-	transcription elongation factor GreA	NA	NA	NA	NA
AVL57586.1\|2340874_2341279_-	hypothetical protein	H9C0W7	Aeromonas_phage	1.8e-19	44.8
AVL57587.1\|2341278_2341725_-	hypothetical protein	Q2NPD1	Xanthomonas_phage	4.8e-21	40.4
AVL57588.1\|2341725_2343210_-	DUF3383 domain-containing protein	A0A077KGV4	Edwardsiella_phage	4.0e-96	41.0
AVL57589.1\|2343190_2343736_-	hypothetical protein	NA	NA	NA	NA
AVL57590.1\|2343720_2344086_-	hypothetical protein	A0A077KAW7	Edwardsiella_phage	8.8e-21	39.7
AVL57591.1\|2344082_2344667_-	hypothetical protein	H9C0W2	Aeromonas_phage	3.2e-17	30.6
AVL57592.1\|2344660_2345116_-	DUF4054 domain-containing protein	Q2NPC6	Xanthomonas_phage	1.2e-19	46.0
AVL57593.1\|2345122_2345470_-	hypothetical protein	H9C0V9	Aeromonas_phage	3.0e-10	40.2
AVL57594.1\|2345473_2346502_-	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	2.3e-82	48.7
AVL57595.1\|2346501_2346984_-	hypothetical protein	A0A1X9SFC3	Acinetobacter_phage	1.1e-26	48.8
AVL57596.1\|2346985_2348332_-	DUF2213 domain-containing protein	A0A219YCD3	Aeromonas_phage	3.2e-68	37.4
AVL57597.1\|2348328_2349018_-\|head	phage head morphogenesis protein	H9C0V1	Aeromonas_phage	4.5e-58	49.6
AVL57598.1\|2349058_2350579_-	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	7.5e-106	44.4
AVL57599.1\|2350578_2352000_-\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	1.8e-186	68.0
AVL57600.1\|2351965_2352718_-	hypothetical protein	G8C7P2	Escherichia_phage	5.3e-12	75.6
AVL57601.1\|2352788_2352971_-	hypothetical protein	NA	NA	NA	NA
AVL60138.1\|2353196_2353637_-\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	3.5e-56	84.3
AVL57602.1\|2353657_2354146_-	lysozyme	M9P0E5	Enterobacteria_phage	2.1e-57	68.1
AVL60139.1\|2354123_2354426_-	alpha/beta hydrolase	NA	NA	NA	NA
AVL57603.1\|2354592_2355051_-\|transposase	IS200/IS605 family transposase IS200F	A0A1S5RHE3	Helicobacter_phage	5.1e-10	33.9
AVL57604.1\|2355007_2355190_-	hypothetical protein	NA	NA	NA	NA
AVL57605.1\|2355864_2356071_-	hypothetical protein	NA	NA	NA	NA
AVL57606.1\|2356187_2356415_+	hypothetical protein	NA	NA	NA	NA
AVL57607.1\|2356548_2357478_+	hypothetical protein	NA	NA	NA	NA
AVL57608.1\|2357464_2357995_+	hypothetical protein	NA	NA	NA	NA
AVL57609.1\|2358026_2358368_-	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	1.1e-54	84.1
AVL57610.1\|2358707_2359019_-	hypothetical protein	K7P7Q1	Enterobacteria_phage	6.1e-39	84.8
AVL57611.1\|2359015_2359210_-	hypothetical protein	S4TNP0	Salmonella_phage	6.1e-13	61.5
AVL57612.1\|2359206_2359806_-	DUF1367 domain-containing protein	A0A0U2RT94	Escherichia_phage	5.0e-98	83.9
AVL57613.1\|2359869_2360118_-	hypothetical protein	NA	NA	NA	NA
AVL57614.1\|2360367_2360520_-	Hok/Gef family protein	NA	NA	NA	NA
AVL57615.1\|2360726_2360999_-	hypothetical protein	NA	NA	NA	NA
AVL57616.1\|2360995_2361391_-	DUF977 domain-containing protein	A0A088CBK9	Shigella_phage	6.4e-17	37.0
AVL57617.1\|2361403_2361865_-	replication protein	A0A0U2JGJ0	Escherichia_phage	7.8e-67	74.8
AVL57618.1\|2361857_2362865_-	DUF1376 domain-containing protein	A0A0U2RT81	Escherichia_phage	1.8e-124	67.5
AVL57619.1\|2362908_2363403_-	hypothetical protein	NA	NA	NA	NA
AVL57620.1\|2363389_2363644_-	XRE family transcriptional regulator	K7PKH4	Enterobacteria_phage	5.3e-17	60.9
AVL57621.1\|2363742_2364141_+	transcriptional regulator	K7PH19	Enterobacteria_phage	1.2e-18	56.0
AVL57622.1\|2364438_2364627_+	hypothetical protein	NA	NA	NA	NA
AVL57623.1\|2364571_2364751_-	hypothetical protein	NA	NA	NA	NA
AVL57624.1\|2365011_2365287_+	hypothetical protein	NA	NA	NA	NA
AVL57625.1\|2365290_2365497_+	cell division inhibitor protein	I6PBM9	Cronobacter_phage	3.0e-10	45.6
AVL57626.1\|2365572_2365908_+	hypothetical protein	NA	NA	NA	NA
AVL57627.1\|2366048_2368739_+	exonuclease VIII	Q9QF34	Lambdoid_phage	2.2e-116	75.6
AVL57628.1\|2368731_2369562_+	recombination and repair protein RecT	A0A1P8DTF2	Proteus_phage	1.0e-104	72.0
AVL57629.1\|2369597_2369918_+	hypothetical protein	A0A222YY67	Escherichia_phage	3.6e-34	60.2
AVL57630.1\|2369910_2370243_+	hypothetical protein	S4TNP2	Salmonella_phage	8.5e-15	72.7
AVL57631.1\|2370853_2371033_+	hypothetical protein	A0A0U2QL97	Escherichia_phage	7.3e-13	60.3
AVL60140.1\|2371323_2371560_+	hypothetical protein	NA	NA	NA	NA
AVL57632.1\|2371620_2371899_+	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	1.4e-10	37.5
AVL57633.1\|2371873_2372953_+\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	1.3e-101	52.8
AVL60141.1\|2373158_2373278_-	hypothetical protein	NA	NA	NA	NA
2373164:2373178	attR	NA	NA	NA	NA
AVL57634.1\|2373335_2373689_-	DUF2511 domain-containing protein	NA	NA	NA	NA
AVL57635.1\|2373705_2374581_-	hypothetical protein	NA	NA	NA	NA
AVL57636.1\|2374581_2374956_-	CopC domain-containing protein YobA	NA	NA	NA	NA
AVL57637.1\|2375093_2375324_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.9e-14	60.3

DBSCAN-SWA_6

2450774 : 2529434

106

Salmonella_phage(79.41%)

terminase,tail,protease,portal,holin,integrase,head,transposase,capsid,plate

attL 2457312:2457327|attR 2531057:2531072

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL57713.1\|2450774_2451233_-\|transposase	IS200/IS605 family transposase IS200F	A0A1S5RHE3	Helicobacter_phage	5.1e-10	33.9
AVL57714.1\|2451413_2452619_-	lysine-N-methylase	NA	NA	NA	NA
AVL57715.1\|2452697_2454185_-	flagellin FliC	NA	NA	NA	NA
AVL57716.1\|2454441_2455845_+	flagellar hook-associated protein 2	NA	NA	NA	NA
AVL57717.1\|2455859_2456267_+	flagellar protein FliS	NA	NA	NA	NA
AVL57718.1\|2456266_2456635_+	flagellar protein FliT	NA	NA	NA	NA
AVL57719.1\|2456706_2458191_+	alpha-amylase	NA	NA	NA	NA
2457312:2457327	attL	NA	NA	NA	NA
AVL57720.1\|2458230_2458656_-	hypothetical protein	NA	NA	NA	NA
AVL57721.1\|2458781_2460047_+	YeeE/YedE family protein	NA	NA	NA	NA
AVL57722.1\|2460043_2460277_+	SirA-like protein	NA	NA	NA	NA
AVL57723.1\|2460541_2460928_+	hypothetical protein	NA	NA	NA	NA
AVL57724.1\|2461047_2461362_-	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
AVL57725.1\|2461578_2463261_+	flagellar M-ring protein	NA	NA	NA	NA
AVL57726.1\|2463253_2464249_+	flagellar motor switch protein FliG	NA	NA	NA	NA
AVL57727.1\|2464241_2464949_+	flagellar assembly protein FliH	NA	NA	NA	NA
AVL57728.1\|2464948_2466319_+	flagellum-specific ATP synthase	NA	NA	NA	NA
AVL57729.1\|2466340_2466784_+	flagellar protein FliJ	NA	NA	NA	NA
AVL57730.1\|2466780_2467998_+	flagellar hook-length control protein FliK	NA	NA	NA	NA
AVL57731.1\|2468102_2468570_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA
AVL57732.1\|2468574_2469579_+	flagellar motor switch protein FliM	NA	NA	NA	NA
AVL57733.1\|2469575_2469989_+	flagellar motor switch protein FliN	NA	NA	NA	NA
AVL57734.1\|2469988_2470366_+	flagellar protein FliO	NA	NA	NA	NA
AVL57735.1\|2470365_2471103_+	flagellar biosynthetic protein FliP	NA	NA	NA	NA
AVL57736.1\|2471112_2471382_+	flagellar biosynthetic protein FliQ	NA	NA	NA	NA
AVL57737.1\|2471390_2472185_+	flagellar biosynthesis protein FliR	NA	NA	NA	NA
AVL57738.1\|2472466_2473090_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AVL57739.1\|2473128_2473377_-	DsrB protein	NA	NA	NA	NA
AVL60145.1\|2473451_2473679_+	DUF2525 domain-containing protein	NA	NA	NA	NA
AVL57740.1\|2473988_2474804_+	mannosyl-3-phosphoglycerate phosphatase-related protein	NA	NA	NA	NA
AVL57741.1\|2474782_2476495_-	cellulose synthesis regulatory protein	A0A127AWB9	Bacillus_phage	1.2e-19	37.4
AVL57742.1\|2476659_2476905_-	DUF2158 domain-containing protein	NA	NA	NA	NA
AVL57743.1\|2476921_2477839_-	DUF808 domain-containing protein	NA	NA	NA	NA
AVL57744.1\|2478008_2478929_+	drug/metabolite exporter YedA	NA	NA	NA	NA
AVL57745.1\|2478917_2479388_-	very short patch repair endonuclease	E5E3X5	Burkholderia_phage	1.2e-30	46.9
AVL57746.1\|2479368_2480799_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4
AVL57747.1\|2480872_2481568_-	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
AVL57748.1\|2481659_2481959_-	hypothetical protein	NA	NA	NA	NA
AVL57749.1\|2482608_2483805_+	porin OmpS1	Q1MVN1	Enterobacteria_phage	1.8e-110	56.1
AVL60146.1\|2484065_2484254_-	cold-shock protein	NA	NA	NA	NA
AVL57750.1\|2484264_2484477_-	cold-shock protein CspJ	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
AVL57751.1\|2484931_2486200_-	protein UmuC	I6RSM4	Salmonella_phage	4.2e-227	92.2
AVL57752.1\|2486202_2486622_-	protein UmuD	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
AVL57753.1\|2486748_2486910_-	hypothetical protein	NA	NA	NA	NA
AVL57754.1\|2486887_2487130_-	hypothetical protein	NA	NA	NA	NA
AVL57755.1\|2488103_2488316_+	hypothetical protein	A0A192Y5V6	Salmonella_phage	2.7e-30	100.0
AVL57756.1\|2488312_2488726_+	hypothetical protein	A0A192Y6F0	Salmonella_phage	2.9e-73	100.0
AVL57757.1\|2488961_2489195_+	hypothetical protein	A0A192Y6D5	Salmonella_phage	1.2e-36	100.0
AVL57758.1\|2489308_2489914_-\|tail	tail fiber assembly protein	A0A192Y8L2	Salmonella_phage	2.7e-107	100.0
AVL57759.1\|2489883_2491446_-\|tail	phage tail protein	A0A192Y7M1	Salmonella_phage	1.0e-288	100.0
AVL57760.1\|2491432_2492020_-	DUF2313 domain-containing protein	A0A192Y5V3	Salmonella_phage	2.9e-114	100.0
AVL57761.1\|2492022_2493102_-\|plate	phage baseplate protein	A0A192Y6E4	Salmonella_phage	2.9e-205	100.0
AVL57762.1\|2493094_2493508_-	hypothetical protein	A0A192Y6D0	Salmonella_phage	3.1e-75	100.0
AVL57763.1\|2493512_2494046_-\|plate	phage baseplate assembly protein V	A0A192Y8K5	Salmonella_phage	8.4e-97	100.0
AVL57764.1\|2494045_2495104_-\|plate	baseplate protein	A0A192Y7L7	Salmonella_phage	1.3e-202	100.0
AVL57765.1\|2495100_2496441_-	DNA circularization protein	A0A192Y5U9	Salmonella_phage	2.0e-251	99.8
AVL57766.1\|2496474_2498403_-\|tail	phage tail tape measure protein	A0A192Y6D8	Salmonella_phage	0.0e+00	100.0
AVL57767.1\|2498487_2498814_-\|tail	phage tail assembly protein	A0A192Y6C5	Salmonella_phage	1.3e-52	100.0
AVL57768.1\|2498810_2499167_-\|tail	phage tail protein	A0A192Y8K0	Salmonella_phage	2.6e-62	100.0
AVL57769.1\|2499166_2500663_-\|tail	phage tail protein	A0A192Y7L1	Salmonella_phage	2.1e-278	100.0
AVL57770.1\|2500652_2500817_-	DUF2635 domain-containing protein	A0A1C9II04	Salmonella_phage	1.3e-24	100.0
AVL57771.1\|2500820_2501381_-	hypothetical protein	A0A192Y5U4	Salmonella_phage	8.0e-106	100.0
AVL57772.1\|2501377_2501890_-	hypothetical protein	A0A192Y6D2	Salmonella_phage	3.5e-92	100.0
AVL57773.1\|2501861_2502266_-\|head,tail	head-tail adaptor protein	A0A192Y6C2	Salmonella_phage	3.2e-72	100.0
AVL57774.1\|2502262_2502586_-\|head,tail	phage gp6-like head-tail connector protein	A0A192Y8J4	Salmonella_phage	6.3e-55	100.0
AVL57775.1\|2502588_2502789_-	hypothetical protein	A0A192Y7K5	Salmonella_phage	1.8e-28	100.0
AVL57776.1\|2502839_2504045_-\|capsid	phage major capsid protein	A0A192Y5T6	Salmonella_phage	7.0e-224	100.0
AVL57777.1\|2504059_2504746_-\|head,protease	HK97 family phage prohead protease	Q8HAD3	Salmonella_phage	6.5e-126	100.0
AVL57778.1\|2504687_2505929_-\|portal	phage portal protein	Q8HAD4	Salmonella_phage	2.9e-241	99.3
AVL57779.1\|2505928_2506111_-	hypothetical protein	Q8HAD5	Salmonella_phage	1.0e-25	100.0
AVL57780.1\|2506122_2507856_-\|terminase	terminase large subunit	U5P0Q5	Shigella_phage	0.0e+00	98.3
AVL57781.1\|2507852_2508356_-\|terminase	phage terminase small subunit P27 family	A0A1B3B2F4	Salmonella_phage	1.0e-88	100.0
AVL57782.1\|2508472_2508823_-	HNH endonuclease	M1FQV2	Enterobacteria_phage	9.8e-62	94.8
AVL60147.1\|2508873_2509206_-	hypothetical protein	A0A192Y5Y1	Salmonella_phage	2.8e-58	100.0
AVL57783.1\|2509505_2509850_-	Rz1 lytic protein	Q8SBD8	Shigella_phage	3.0e-39	80.0
AVL57784.1\|2510057_2510672_-	endolysin	A0A192Y6G4	Salmonella_phage	5.7e-113	100.0
AVL57785.1\|2510671_2510953_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	9.7e-20	45.2
AVL57786.1\|2510939_2511326_-	hypothetical protein	A0A192Y8P2	Salmonella_phage	7.0e-61	100.0
AVL60148.1\|2511471_2511729_-	hypothetical protein	A0A1C9IHX4	Salmonella_phage	3.1e-41	100.0
AVL57787.1\|2511879_2512632_-	antitermination protein	A0A192Y5X6	Salmonella_phage	1.8e-145	100.0
AVL60149.1\|2512645_2513635_-	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	4.0e-193	99.1
AVL57788.1\|2513642_2514548_-	KilA-N domain-containing protein	Q8HA92	Salmonella_phage	1.1e-162	99.7
AVL57789.1\|2514519_2514909_-	RusA family crossover junction endodeoxyribonuclease	Q8HA93	Salmonella_phage	3.7e-70	100.0
AVL57790.1\|2514905_2515799_-	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	7.6e-175	100.0
AVL57791.1\|2515798_2516323_-	PerC family transcriptional regulator	Q8HA95	Salmonella_phage	2.4e-96	100.0
AVL57792.1\|2516282_2517101_-	helix-turn-helix domain-containing protein	Q8HA96	Salmonella_phage	2.8e-136	100.0
AVL57793.1\|2517097_2517322_-	hypothetical protein	A0A1C9II64	Salmonella_phage	3.3e-39	100.0
AVL57794.1\|2517318_2518476_-	peptidase	Q8HA97	Salmonella_phage	4.2e-218	100.0
AVL57795.1\|2518472_2519027_-	hypothetical protein	A0A1C9II13	Salmonella_phage	6.9e-102	100.0
AVL57796.1\|2519055_2519280_-	XRE family transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.9e-34	100.0
AVL57797.1\|2519218_2519404_-	amino acid permease	NA	NA	NA	NA
AVL57798.1\|2519377_2520073_+	helix-turn-helix transcriptional regulator	Q8HAA0	Salmonella_phage	3.2e-128	100.0
AVL57799.1\|2520278_2520617_+	hypothetical protein	A0A1C9IHZ4	Salmonella_phage	7.0e-57	100.0
AVL57800.1\|2520579_2520996_-	hypothetical protein	A0A1C9IHY8	Salmonella_phage	6.4e-76	100.0
AVL57801.1\|2521060_2521246_-	hypothetical protein	NA	NA	NA	NA
AVL57802.1\|2521343_2521715_+	hypothetical protein	A0A192Y6G0	Salmonella_phage	2.5e-63	100.0
AVL57803.1\|2521772_2522600_+	DUF2303 domain-containing protein	A0A192Y6E5	Salmonella_phage	2.6e-153	100.0
AVL57804.1\|2522736_2523276_+	hypothetical protein	A0A192Y8M4	Salmonella_phage	2.6e-98	100.0
AVL57805.1\|2523346_2523880_+	hypothetical protein	A0A192Y7N1	Salmonella_phage	2.5e-101	100.0
AVL57806.1\|2523881_2524139_+	hypothetical protein	A0A192Y5W0	Salmonella_phage	1.3e-42	100.0
AVL57807.1\|2524149_2524731_+	molecular chaperone DnaJ	A0A192Y6F5	Salmonella_phage	4.7e-109	100.0
AVL57808.1\|2524734_2525304_+	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	7.1e-110	100.0
AVL57809.1\|2525328_2525571_+	DUF4224 domain-containing protein	Q8HAA9	Salmonella_phage	9.5e-40	100.0
AVL57810.1\|2525572_2526562_+\|integrase	integrase	A0A192Y7M7	Salmonella_phage	8.6e-196	100.0
AVL57811.1\|2526853_2527651_+	protein MtfA	NA	NA	NA	NA
AVL57812.1\|2528022_2528313_+	DUF4102 domain-containing protein	H2BDA3	Pseudomonas_phage	3.0e-08	49.1
AVL57813.1\|2528960_2529434_+	peptidase	A0A0F6TJ61	Escherichia_coli_O157_typing_phage	7.1e-39	77.6
2531057:2531072	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2616139 : 2626645

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL57899.1\|2616139_2617453_-	LPS biosynthesis protein	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1
AVL57900.1\|2617479_2618559_-	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	6.6e-16	24.1
AVL57901.1\|2618563_2619337_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
AVL57902.1\|2619333_2620326_-	protein RfbI	NA	NA	NA	NA
AVL57903.1\|2620331_2620883_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.2e-52	58.0
AVL57904.1\|2620883_2621762_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	9.3e-109	65.5
AVL57905.1\|2621809_2622709_-	NAD(P)-dependent oxidoreductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
AVL57906.1\|2622708_2623794_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-102	53.9
AVL57907.1\|2624170_2625064_-	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	4.8e-44	42.2
AVL57908.1\|2625241_2626645_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	27.1

DBSCAN-SWA_8

2694953 : 2704124

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL57962.1\|2694953_2696987_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6
AVL57963.1\|2697227_2697686_+	lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
AVL57964.1\|2697857_2698388_+	hypothetical protein	NA	NA	NA	NA
AVL57965.1\|2698444_2698912_-	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
AVL57966.1\|2698958_2699678_-	DNA-binding response regulator	NA	NA	NA	NA
AVL57967.1\|2699674_2701360_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.2e-279	91.1
AVL57968.1\|2701582_2702314_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
AVL57969.1\|2702373_2702481_+	hypothetical protein	NA	NA	NA	NA
AVL57970.1\|2702461_2703193_-	ABC transporter permease	NA	NA	NA	NA
AVL57971.1\|2703176_2704124_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	31.2

DBSCAN-SWA_9

2776007 : 2788298

Salmonella_phage(45.45%)

holin,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL58039.1\|2776007_2776511_-	DNA polymerase V	Q1MVE7	Enterobacteria_phage	9.5e-50	71.3
AVL58040.1\|2776538_2776829_+	DinI family protein	S4TND2	Salmonella_phage	4.7e-25	83.3
AVL58041.1\|2777176_2779006_+	acyltransferase	C6ZR20	Salmonella_phage	3.0e-61	29.6
AVL58042.1\|2779059_2779503_-\|tail	tail assembly chaperone	A0A0F7LDZ0	Escherichia_phage	1.4e-28	43.9
AVL58043.1\|2779880_2780408_-\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	3.1e-11	31.3
AVL58044.1\|2780410_2781652_-	hypothetical protein	Q8HAB4	Salmonella_phage	1.0e-52	95.3
AVL58045.1\|2782244_2782574_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	3.9e-36	94.6
AVL58046.1\|2782870_2784202_+	NTPase	R9TRQ8	Vibrio_phage	2.1e-19	28.5
AVL58047.1\|2784230_2784599_-	antitermination protein Q	A5LH77	Enterobacteria_phage	7.4e-52	81.7
AVL60157.1\|2784613_2785603_-	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	6.0e-189	97.3
AVL58048.1\|2785931_2788298_-	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	Q9MBL9	Phage_Gifsy-2	2.9e-72	88.7

DBSCAN-SWA_10

3044119 : 3110362

Salmonella_phage(85.19%)

terminase,tail,protease,holin,transposase,tRNA,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL58289.1\|3044119_3046138_-\|tRNA	tRNA cytosine(34) acetyltransferase TmcA	NA	NA	NA	NA
AVL58290.1\|3046153_3047017_-	neutral zinc metallopeptidase	NA	NA	NA	NA
AVL58291.1\|3047147_3047861_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4R1E8	Synechococcus_phage	9.1e-38	37.5
AVL58292.1\|3048035_3049070_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA
AVL58293.1\|3049086_3049965_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
AVL58294.1\|3050044_3050683_+	glycine cleavage system transcriptional repressor	NA	NA	NA	NA
AVL58295.1\|3050682_3051153_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
AVL58296.1\|3051199_3051553_-	glycerate kinase	W6LM47	Streptococcus_phage	1.3e-13	40.2
AVL58297.1\|3051712_3052171_-\|transposase	IS200/IS605 family transposase IS200F	A0A1S5RHE3	Helicobacter_phage	5.1e-10	33.9
AVL58298.1\|3052127_3052343_-	hypothetical protein	NA	NA	NA	NA
AVL58299.1\|3052450_3053518_-	AI-2E family transporter	NA	NA	NA	NA
AVL58300.1\|3053725_3055189_+\|protease	beta-barrel assembly-enhancing protease	NA	NA	NA	NA
AVL58301.1\|3055228_3055588_+	arsenate reductase (glutaredoxin)	NA	NA	NA	NA
AVL58302.1\|3055614_3056340_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA
AVL58303.1\|3056410_3057700_-	uracil permease	Q9KX94	Enterobacteria_phage	3.0e-63	36.6
AVL58304.1\|3057787_3058414_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
AVL60165.1\|3058827_3059865_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	2.9e-69	41.8
AVL58305.1\|3059864_3060503_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	1.5e-31	44.0
AVL58306.1\|3060691_3062758_+	polyphosphate kinase 1	NA	NA	NA	NA
AVL58307.1\|3062762_3064304_+	exopolyphosphatase	NA	NA	NA	NA
AVL58308.1\|3064339_3066553_-	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
AVL58309.1\|3066649_3066787_-	hypothetical protein	NA	NA	NA	NA
AVL58310.1\|3066965_3067157_+	DUF2633 domain-containing protein	G9L6F2	Escherichia_phage	6.4e-23	84.1
AVL58311.1\|3067235_3067472_-	hypothetical protein	NA	NA	NA	NA
AVL58312.1\|3067521_3067713_+	hypothetical protein	NA	NA	NA	NA
AVL58313.1\|3067697_3068027_+	cytoplasmic protein	NA	NA	NA	NA
AVL58314.1\|3068684_3069167_-	DUF2514 domain-containing protein	T1SAQ9	Salmonella_phage	3.2e-79	100.0
AVL58315.1\|3069163_3069793_-	endolysin	T1SBJ3	Salmonella_phage	1.4e-119	100.0
AVL58316.1\|3069782_3070091_-\|holin	phage holin family protein	T1SA10	Salmonella_phage	2.6e-50	100.0
AVL58317.1\|3070077_3070482_-	hypothetical protein	T1SA79	Salmonella_phage	9.9e-66	100.0
AVL60166.1\|3070639_3070915_+	GtrA family protein	T1S9I9	Salmonella_phage	1.8e-47	100.0
AVL58318.1\|3070982_3072905_+	acyltransferase	M1F3D2	Salmonella_phage	0.0e+00	99.8
AVL60167.1\|3075447_3075708_+	hypothetical protein	T1SA06	Salmonella_phage	7.6e-43	100.0
AVL58319.1\|3075908_3078383_-	hypothetical protein	T1S9I6	Salmonella_phage	0.0e+00	100.0
AVL58320.1\|3078387_3080190_-	hypothetical protein	T1SAQ5	Salmonella_phage	0.0e+00	100.0
AVL58321.1\|3080186_3083000_-	hypothetical protein	T1SBJ1	Salmonella_phage	0.0e+00	100.0
AVL58322.1\|3083012_3083555_-	hypothetical protein	T1SA02	Salmonella_phage	1.1e-70	98.9
AVL58323.1\|3083554_3084019_-	hypothetical protein	T1SA73	Salmonella_phage	1.8e-87	100.0
AVL58324.1\|3084018_3086496_-	hypothetical protein	T1S9I3	Salmonella_phage	0.0e+00	100.0
AVL58325.1\|3086495_3087101_-	hypothetical protein	T1SAQ2	Salmonella_phage	2.8e-112	100.0
AVL58326.1\|3087100_3087436_-	hypothetical protein	T1SBJ0	Salmonella_phage	5.3e-57	100.0
AVL58327.1\|3087500_3087785_-	hypothetical protein	T1SA01	Salmonella_phage	2.5e-47	100.0
AVL58328.1\|3087777_3088170_-	hypothetical protein	T1SA71	Salmonella_phage	3.2e-61	100.0
AVL58329.1\|3088182_3089190_-\|capsid	phage capsid protein	T1S9H9	Salmonella_phage	2.6e-192	100.0
AVL58330.1\|3089200_3089917_-	peptidase	T1SAP9	Salmonella_phage	1.3e-92	100.0
AVL58331.1\|3089919_3090216_-	hypothetical protein	T1SBI9	Salmonella_phage	6.2e-49	100.0
AVL58332.1\|3090212_3091883_-\|tail	phage tail protein	T1S9Z7	Salmonella_phage	0.0e+00	100.0
AVL58333.1\|3091897_3092104_-	hypothetical protein	T1SA67	Salmonella_phage	5.7e-09	100.0
AVL60168.1\|3092854_3093223_+\|protease	membrane protease subunit	T1S9H7	Salmonella_phage	5.7e-60	99.2
AVL58334.1\|3093265_3094747_-\|terminase	terminase	M1F3C4	Salmonella_phage	2.9e-296	100.0
AVL60169.1\|3094743_3095337_-\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	3.0e-103	100.0
AVL58335.1\|3095440_3095749_-	hypothetical protein	H2D0I8	Salmonella_phage	6.6e-54	100.0
AVL58336.1\|3095890_3096250_-	Eaf protein	T1SA95	Salmonella_phage	4.0e-66	100.0
AVL58337.1\|3096246_3096504_-	DUF4752 domain-containing protein	T1S9K2	Salmonella_phage	2.0e-40	100.0
AVL60170.1\|3096500_3097124_-	hypothetical protein	M1F3E2	Salmonella_phage	4.7e-123	100.0
AVL58338.1\|3097135_3097615_-	hypothetical protein	T1SBJ7	Salmonella_phage	3.2e-79	100.0
AVL58339.1\|3097676_3098021_-	DUF1064 domain-containing protein	T1SA23	Salmonella_phage	3.3e-62	100.0
AVL58340.1\|3098141_3098957_-	Pyocin large subunit	T1SA92	Salmonella_phage	1.3e-152	100.0
AVL58341.1\|3098999_3099203_-	hypothetical protein	T1S9K0	Salmonella_phage	2.0e-30	100.0
AVL58342.1\|3099348_3099582_-	hypothetical protein	T1SAR5	Salmonella_phage	1.2e-39	100.0
AVL58343.1\|3099737_3100334_+	XRE family transcriptional regulator	T1SBJ6	Salmonella_phage	6.9e-108	100.0
AVL58344.1\|3100525_3100708_+	hypothetical protein	T1SA20	Salmonella_phage	8.5e-25	100.0
AVL58345.1\|3100712_3101015_+	hypothetical protein	T1SA88	Salmonella_phage	2.6e-47	100.0
AVL58346.1\|3101011_3101836_+	exodeoxyribonuclease VIII	T1S9J7	Salmonella_phage	1.1e-164	100.0
AVL58347.1\|3102236_3103118_+	recombinase RecT	T1SBJ5	Salmonella_phage	6.1e-161	100.0
AVL58348.1\|3103167_3103416_+	AlpA family phage regulatory protein	T1SA17	Salmonella_phage	4.0e-41	100.0
AVL58349.1\|3103525_3103825_+	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	1.1e-48	100.0
AVL58350.1\|3103817_3103976_+	DUF1317 domain-containing protein	T1SAR0	Salmonella_phage	5.3e-23	100.0
AVL58351.1\|3103972_3105040_+	DGQHR domain-containing protein	T1SBJ4	Salmonella_phage	1.3e-202	100.0
AVL58352.1\|3105036_3105630_+	adenine methylase	T1SA14	Salmonella_phage	8.1e-117	100.0
AVL58353.1\|3105626_3105806_+	hypothetical protein	T1SA82	Salmonella_phage	2.4e-24	100.0
AVL58354.1\|3105802_3107056_-	DUF4102 domain-containing protein	T1S9J3	Salmonella_phage	2.3e-238	99.8
AVL58355.1\|3107248_3108826_-	GMP synthase (glutamine-hydrolyzing)	NA	NA	NA	NA
AVL58356.1\|3108895_3110362_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	4.0e-88	38.7

DBSCAN-SWA_11

3168030 : 3273661

111

Salmonella_phage(32.76%)

terminase,tail,portal,lysis,holin,head,transposase,tRNA,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL58393.1\|3168030_3168762_-\|tRNA	tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ	NA	NA	NA	NA
AVL58394.1\|3168880_3169684_+	inositol monophosphatase	NA	NA	NA	NA
AVL58395.1\|3169828_3170707_+	alpha/beta hydrolase	A0A1C9C5K3	Heterosigma_akashiwo_virus	3.5e-15	24.7
AVL58396.1\|3170888_3171932_+	sulfite reductase subunit alpha	NA	NA	NA	NA
AVL58397.1\|3171935_3172754_+	anaerobic sulfite reductase subunit B	NA	NA	NA	NA
AVL58398.1\|3172764_3173778_+	anaerobic sulfite reductase subunit AsrC	NA	NA	NA	NA
AVL58399.1\|3173778_3174765_-	nickel transporter	NA	NA	NA	NA
AVL60173.1\|3174755_3175394_-	DUF1007 domain-containing protein	NA	NA	NA	NA
AVL58400.1\|3175519_3176797_+	stationary phase inducible protein CsiE	NA	NA	NA	NA
AVL58401.1\|3176791_3177931_-	3-phenylpropionate MFS transporter	NA	NA	NA	NA
AVL58402.1\|3178126_3179380_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	1.3e-100	53.0
AVL58403.1\|3179704_3180895_+	flavohemoprotein	NA	NA	NA	NA
AVL58404.1\|3181076_3182621_+	transcriptional regulator CadC	NA	NA	NA	NA
AVL58405.1\|3182981_3184313_+	lysine:cadaverine antiporter	NA	NA	NA	NA
AVL58406.1\|3184395_3186540_+	lysine decarboxylase CadA	NA	NA	NA	NA
AVL58407.1\|3186595_3188056_+	MFS transporter	A0A0P0IY73	Acinetobacter_phage	1.7e-46	28.8
AVL58408.1\|3188104_3188443_-	nitrogen regulatory protein P-II 1	NA	NA	NA	NA
AVL58409.1\|3188519_3189857_-	two-component system response regulator GlrR	W8CYM9	Bacillus_phage	1.8e-10	29.2
AVL58410.1\|3189853_3190618_-	two-component system QseEF-associated lipoprotein QseG	NA	NA	NA	NA
AVL58411.1\|3190619_3192005_-	two component system sensor histidine kinase QseE/GlrK	W8CYF6	Bacillus_phage	1.9e-15	26.1
AVL58412.1\|3192699_3196587_-	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	1.4e-127	57.6
AVL58413.1\|3196608_3196842_+	hypothetical protein	NA	NA	NA	NA
AVL58414.1\|3196842_3198387_+	lytic transglycosylase F	NA	NA	NA	NA
AVL58415.1\|3198437_3198989_-\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA
AVL58416.1\|3199013_3199649_-	phosphatidylglycerophosphatase C	NA	NA	NA	NA
AVL58417.1\|3199652_3201014_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
AVL58418.1\|3201024_3201918_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
AVL58419.1\|3202033_3202882_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AVL58420.1\|3202920_3203838_-	oxidoreductase	NA	NA	NA	NA
AVL58421.1\|3203859_3205056_-	MFS transporter	NA	NA	NA	NA
AVL58422.1\|3205171_3206098_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	3.0e-09	24.4
AVL58423.1\|3206135_3206396_+	ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	1.4e-17	52.3
AVL58424.1\|3206507_3206888_-	holo-ACP synthase	NA	NA	NA	NA
AVL58425.1\|3206887_3207619_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
AVL58426.1\|3207630_3208359_-	DNA repair protein RecO	NA	NA	NA	NA
AVL58427.1\|3208370_3209276_-	GTPase Era	NA	NA	NA	NA
AVL60174.1\|3209272_3209953_-	ribonuclease 3	A0A2K9L5P0	Tupanvirus	7.4e-21	31.8
AVL58428.1\|3210226_3211201_-	S26 family signal peptidase	NA	NA	NA	NA
AVL58429.1\|3211217_3213017_-	elongation factor 4	E4ZFJ7	Streptococcus_phage	7.2e-23	24.9
AVL58430.1\|3213421_3214915_+	type III secretion system protein	Q9MBM1	Phage_Gifsy-1	3.4e-260	100.0
AVL58431.1\|3215465_3215603_+	hypothetical protein	NA	NA	NA	NA
AVL58432.1\|3215849_3216395_+\|transposase	transposase	NA	NA	NA	NA
AVL60175.1\|3217059_3217125_-	hypothetical protein	NA	NA	NA	NA
AVL58433.1\|3217187_3217400_-	hypothetical protein	S4TTF2	Salmonella_phage	3.8e-08	90.6
AVL58434.1\|3217506_3217734_+	phage virulence factor	NA	NA	NA	NA
AVL58435.1\|3217830_3218409_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	3.6e-93	88.9
AVL58436.1\|3218398_3219223_-\|tail	phage tail protein	A0A0M4QWS3	Salmonella_phage	1.2e-145	92.0
AVL58437.1\|3219219_3221592_-\|tail	phage tail protein	A0A0K2FIZ6	Escherichia_phage	2.0e-89	65.4
AVL58438.1\|3221645_3221888_-	hypothetical protein	NA	NA	NA	NA
AVL58439.1\|3221926_3225289_-	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	79.7
AVL58440.1\|3225350_3225998_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.1e-89	77.7
AVL58441.1\|3225895_3226633_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.2e-129	85.0
AVL58442.1\|3226639_3227338_-\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	5.5e-104	76.3
AVL58443.1\|3227347_3227677_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.3e-42	70.4
AVL58444.1\|3227679_3230775_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	1.1e-276	61.6
AVL58445.1\|3230746_3231085_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-31	62.4
AVL58446.1\|3231081_3231477_-\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.3e-30	56.5
AVL58447.1\|3231527_3232274_-\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	1.9e-99	76.9
AVL58448.1\|3232281_3232683_-\|tail	phage tail protein	Q9G0F3	Phage_Gifsy-1	4.0e-51	99.0
AVL58449.1\|3232679_3233258_-\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.7e-82	80.2
AVL58450.1\|3233244_3233622_-\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	1.5e-28	55.6
AVL58451.1\|3233632_3233998_-	DNA packaging protein	NA	NA	NA	NA
AVL58452.1\|3234055_3235084_-\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	1.3e-114	61.1
AVL58453.1\|3235138_3235486_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	9.2e-20	52.7
AVL58454.1\|3235498_3236995_-	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	1.1e-96	52.2
AVL58455.1\|3236984_3238565_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	9.6e-189	62.8
AVL58456.1\|3238561_3238765_-\|tail	phage tail protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
AVL58457.1\|3238748_3240680_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.3e-259	65.9
AVL58458.1\|3240651_3241197_-\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.5e-56	80.6
AVL58459.1\|3241241_3241448_-	hypothetical protein	NA	NA	NA	NA
AVL58460.1\|3241482_3241884_+	inhibitor of g-type lysozyme	NA	NA	NA	NA
AVL58461.1\|3242140_3242644_-	hypothetical protein	NA	NA	NA	NA
AVL60176.1\|3242971_3243418_-\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	9.3e-57	83.9
AVL58462.1\|3243450_3244065_-	endolysin	Q8HA86	Salmonella_phage	2.2e-109	93.6
AVL58463.1\|3244064_3244346_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	2.6e-36	80.6
AVL58464.1\|3244332_3244722_-	hypothetical protein	K7PHB9	Enterobacterial_phage	4.8e-41	72.5
AVL58465.1\|3244811_3245000_-	hypothetical protein	NA	NA	NA	NA
AVL58466.1\|3245054_3245246_+	hypothetical protein	NA	NA	NA	NA
AVL58467.1\|3245526_3245952_-	subtilase cytotoxin subunit B-like protein	NA	NA	NA	NA
AVL58468.1\|3246084_3246810_-	pertussis toxin-like subunit ArtA	A0A0U2KD26	Escherichia_phage	4.0e-81	66.2
AVL58469.1\|3247010_3247589_-	DUF1133 domain-containing protein	A0A0U2S606	Escherichia_phage	1.1e-49	57.2
AVL58470.1\|3248600_3249506_-	KilA-N domain-containing protein	Q8HA92	Salmonella_phage	9.7e-162	99.3
AVL58471.1\|3249477_3249867_-	RusA family crossover junction endodeoxyribonuclease	A0A192Y8N5	Salmonella_phage	1.6e-68	97.7
AVL58472.1\|3250755_3251238_-	PerC family transcriptional regulator	Q8HA95	Salmonella_phage	1.8e-85	97.5
AVL58473.1\|3251239_3252199_-	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.2e-117	80.9
AVL58474.1\|3252195_3252420_-	hypothetical protein	A0A1C9II64	Salmonella_phage	3.3e-39	100.0
AVL58475.1\|3252416_3253559_-	peptidase	A0A1C9IHV9	Salmonella_phage	1.0e-208	98.2
AVL58476.1\|3253555_3254110_-	hypothetical protein	A0A1C9II13	Salmonella_phage	1.2e-101	99.5
AVL58477.1\|3254138_3254363_-	XRE family transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.9e-34	100.0
AVL58478.1\|3254301_3254487_-	amino acid permease	NA	NA	NA	NA
AVL58479.1\|3254460_3255156_+	helix-turn-helix transcriptional regulator	Q8HAA0	Salmonella_phage	4.6e-127	99.6
AVL58480.1\|3255509_3255668_+	hypothetical protein	H6WRX3	Salmonella_phage	2.4e-23	100.0
AVL58481.1\|3255689_3256040_+	DNA breaking-rejoining protein	S4TSN6	Salmonella_phage	6.4e-61	98.3
AVL58482.1\|3256166_3259094_+	exodeoxyribonuclease	H6WRX1	Salmonella_phage	0.0e+00	98.2
AVL58483.1\|3260255_3260495_+	DUF4060 domain-containing protein	S4TR31	Salmonella_phage	2.0e-37	100.0
AVL58484.1\|3260535_3260820_+	excisionase Xis	H6WRW8	Salmonella_phage	3.1e-42	86.2
AVL58485.1\|3260797_3262027_-	DUF4102 domain-containing protein	H6WRW7	Salmonella_phage	5.4e-232	93.9
AVL58486.1\|3262378_3262495_-	transcriptional regulator	NA	NA	NA	NA
AVL58487.1\|3262524_3263004_-	SoxR reducing system protein RseC	NA	NA	NA	NA
AVL58488.1\|3263000_3263957_-	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
AVL58489.1\|3263956_3264607_-	anti-sigma-E factor RseA	NA	NA	NA	NA
AVL58490.1\|3264638_3265214_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
AVL58491.1\|3265374_3265554_-	hypothetical protein	NA	NA	NA	NA
AVL58492.1\|3265638_3267261_+	L-aspartate oxidase	NA	NA	NA	NA
AVL58493.1\|3267245_3267983_-\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase	NA	NA	NA	NA
AVL58494.1\|3268113_3269448_+	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	1.6e-43	29.7
AVL60177.1\|3269465_3270365_-	LysR family transcriptional regulator	NA	NA	NA	NA
AVL58495.1\|3270467_3271055_+	cysteine/O-acetylserine efflux protein	NA	NA	NA	NA
AVL58496.1\|3271116_3271500_-	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	6.1e-33	74.0
AVL58497.1\|3271818_3272508_+	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	49.5
AVL58498.1\|3272623_3273661_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_12

4497846 : 4540539

Escherichia_phage(25.0%)

transposase,tRNA,integrase

attL 4501595:4501609|attR 4529613:4529627

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL59612.1\|4497846_4499211_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
AVL59613.1\|4499414_4500632_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	6.3e-15	28.3
AVL59614.1\|4500628_4500997_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AVL59615.1\|4501354_4502308_-	replication protein	NA	NA	NA	NA
4501595:4501609	attL	NA	NA	NA	NA
AVL59616.1\|4502294_4502522_-	DNA-binding protein	NA	NA	NA	NA
AVL59617.1\|4502672_4505432_-	conjugal transfer protein TraN	NA	NA	NA	NA
AVL59618.1\|4505528_4506062_-	regulator	NA	NA	NA	NA
AVL59619.1\|4506064_4506676_-	hypothetical protein	NA	NA	NA	NA
AVL59620.1\|4506675_4506897_-	hypothetical protein	NA	NA	NA	NA
AVL59621.1\|4507071_4507362_+	hypothetical protein	NA	NA	NA	NA
AVL59622.1\|4507381_4507636_-	hypothetical protein	NA	NA	NA	NA
AVL59623.1\|4507635_4511040_-	conjugal transfer protein TraG	NA	NA	NA	NA
AVL59624.1\|4511043_4512468_-	conjugal transfer protein TraH	NA	NA	NA	NA
AVL59625.1\|4512711_4513569_+	hypothetical protein	NA	NA	NA	NA
AVL59626.1\|4513565_4513961_+	hypothetical protein	NA	NA	NA	NA
AVL59627.1\|4514375_4514645_-	hypothetical protein	NA	NA	NA	NA
AVL59628.1\|4514722_4514908_-	hypothetical protein	NA	NA	NA	NA
AVL59629.1\|4515793_4516666_-\|integrase	integrase	NA	NA	NA	NA
AVL59630.1\|4517734_4519396_-	ATP-dependent helicase	S5MMD7	Bacillus_phage	7.1e-09	22.8
AVL59631.1\|4519392_4521318_-	ATP-dependent endonuclease	NA	NA	NA	NA
AVL59632.1\|4521395_4523939_-	subtilase	NA	NA	NA	NA
AVL59633.1\|4523959_4524949_-	ATP-binding protein	NA	NA	NA	NA
AVL59634.1\|4525027_4525612_-	recombinase family protein	E5FFF9	Burkholderia_phage	5.5e-49	58.1
AVL59635.1\|4525635_4525947_-\|transposase	transposase	NA	NA	NA	NA
AVL59636.1\|4525885_4526899_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AVL60228.1\|4527044_4527836_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
AVL59637.1\|4527999_4528347_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AVL59638.1\|4528340_4529312_+	sulfonamide-resistant dihydropteroate synthase Sul1-delta	NA	NA	NA	NA
AVL59639.1\|4529528_4530743_+	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	4.2e-19	28.7
4529613:4529627	attR	NA	NA	NA	NA
AVL59640.1\|4530770_4530953_+	DUF3363 domain-containing protein	NA	NA	NA	NA
AVL59641.1\|4530949_4531576_-	TetR family transcriptional regulator	NA	NA	NA	NA
AVL59642.1\|4531679_4532855_+	tetracycline efflux MFS transporter Tet(G)	NA	NA	NA	NA
AVL59643.1\|4532875_4533667_+	LysR family transcriptional regulator	NA	NA	NA	NA
AVL59644.1\|4533758_4535291_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AVL59645.1\|4535517_4536171_-	molecular chaperone GroEL	A0A2I7SAK5	Vibrio_phage	1.1e-21	58.1
AVL60229.1\|4536376_4537243_+	PSE family carbenicillin-hydrolyzing class A beta-lactamase CARB-2	A0A077SL40	Escherichia_phage	4.8e-57	44.1
AVL59646.1\|4537459_4537807_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AVL59647.1\|4537800_4538640_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
AVL59648.1\|4538569_4538749_-	hypothetical protein	NA	NA	NA	NA
AVL59649.1\|4538767_4539268_+	N-acetyltransferase	NA	NA	NA	NA
AVL59650.1\|4539573_4539687_-	NTP-binding protein	NA	NA	NA	NA
AVL59651.1\|4539774_4540539_+\|transposase	IS6 family transposase IS6100	A0A077SL39	Escherichia_phage	4.3e-86	65.7

DBSCAN-SWA_13

4911461 : 4931880

Burkholderia_phage(47.37%)

plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL59970.1\|4911461_4912190_-	hypothetical protein	A0A077SLK3	Escherichia_phage	5.6e-35	37.3
AVL59971.1\|4912386_4912677_-	hypothetical protein	NA	NA	NA	NA
AVL59972.1\|4912925_4913381_-	hypothetical protein	NA	NA	NA	NA
AVL59973.1\|4913377_4913983_-	DUF4376 domain-containing protein	NA	NA	NA	NA
AVL59974.1\|4913987_4915733_-\|tail	phage tail protein	A0A0M3ULF6	Salmonella_phage	3.2e-52	52.2
AVL59975.1\|4915735_4916368_-\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.6e-24	56.4
AVL59976.1\|4916360_4917476_-\|plate	baseplate protein	Q6QI99	Burkholderia_phage	1.8e-101	52.2
AVL59977.1\|4917466_4917826_-\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
AVL59978.1\|4917989_4919537_-	hypothetical protein	B9UDL6	Salmonella_phage	1.9e-48	29.9
AVL59979.1\|4919536_4920466_-	glycosyltransferase	S5FKN0	Shigella_phage	8.8e-150	83.8
AVL59980.1\|4920462_4920825_-	GtrA family protein	I1TED9	Salmonella_phage	1.2e-43	70.8
AVL59981.1\|4921152_4921875_-\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.3e-11	41.0
AVL59982.1\|4921884_4922928_-	phage protein D	Q6QIA2	Burkholderia_phage	2.5e-76	45.1
AVL59983.1\|4922915_4923125_-	hypothetical protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
AVL59984.1\|4924076_4926431_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	9.0e-66	30.6
AVL59985.1\|4926527_4926656_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
AVL59986.1\|4926615_4926933_-\|tail	phage tail assembly protein	NA	NA	NA	NA
AVL59987.1\|4926984_4927509_-\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
AVL59988.1\|4927508_4928936_-\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.1e-194	70.9
AVL59989.1\|4928925_4929123_-	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
AVL59990.1\|4929119_4929575_-	hypothetical protein	NA	NA	NA	NA
AVL59991.1\|4929734_4930049_-	hypothetical protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
AVL59992.1\|4930061_4930667_-	lytic transglycosylase domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.5e-60	59.9
AVL59993.1\|4930669_4930957_-	hypothetical protein	Q6QIC8	Burkholderia_phage	2.3e-16	49.1
AVL59994.1\|4931532_4931880_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP027409

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP027410

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection