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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP027417 Oligella urethralis strain FDAARGOS_329 chromosome, complete genome 0 crisprs DEDDh,csa3,RT,DinG,c2c9_V-U4,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,cas9,cas2,cas3,cas14j 0 0 187 0

Results visualization

1. CP027417
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 6717 6 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_2 37359 : 38295 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_3 65968 : 75888 7 uncultured_Mediterranean_phage(25.0%) NA NA
DBSCAN-SWA_4 82711 : 83542 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_5 86557 : 89367 3 Enterobacteria_phage(66.67%) NA NA
DBSCAN-SWA_6 93023 : 93863 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_7 97145 : 99883 2 Catovirus(50.0%) NA NA
DBSCAN-SWA_8 103365 : 112748 10 Acinetobacter_phage(42.86%) NA NA
DBSCAN-SWA_9 115884 : 117378 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_10 122339 : 126310 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_11 138936 : 141717 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_12 154386 : 156096 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_13 162339 : 163350 1 Burkholderia_phage(100.0%) transposase NA
DBSCAN-SWA_14 171668 : 172007 1 Burkholderia_phage(100.0%) NA NA
DBSCAN-SWA_15 178862 : 180950 1 Catovirus(100.0%) tRNA NA
DBSCAN-SWA_16 190819 : 191383 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_17 200961 : 204127 3 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_18 218039 : 218993 1 Only_Syngen_Nebraska_virus(100.0%) NA NA
DBSCAN-SWA_19 226152 : 226725 1 Salicola_phage(100.0%) NA NA
DBSCAN-SWA_20 251782 : 252145 1 Lake_Baikal_phage(100.0%) NA NA
DBSCAN-SWA_21 255438 : 263679 9 Staphylococcus_phage(33.33%) integrase attL 259372:259391|attR 266565:266584
DBSCAN-SWA_22 274940 : 277872 2 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_23 288237 : 289050 1 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_24 304153 : 305488 1 Erwinia_phage(100.0%) protease NA
DBSCAN-SWA_25 308801 : 313335 5 Pithovirus(50.0%) tRNA NA
DBSCAN-SWA_26 316914 : 319191 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_27 327074 : 327332 1 Rhizobium_phage(100.0%) NA NA
DBSCAN-SWA_28 330443 : 331967 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_29 343967 : 358239 13 Bacillus_phage(16.67%) transposase NA
DBSCAN-SWA_30 371952 : 372624 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_31 375954 : 382578 5 Gordonia_phage(25.0%) NA NA
DBSCAN-SWA_32 388752 : 389592 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_33 394878 : 396660 1 Cronobacter_phage(100.0%) NA NA
DBSCAN-SWA_34 404254 : 405532 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_35 409662 : 410436 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_36 417448 : 423275 4 Burkholderia_phage(33.33%) transposase NA
DBSCAN-SWA_37 427833 : 431619 4 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_38 440834 : 441365 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_39 446259 : 449447 4 Vibrio_phage(33.33%) tRNA NA
DBSCAN-SWA_40 452759 : 456536 1 Dickeya_phage(100.0%) NA NA
DBSCAN-SWA_41 459929 : 460568 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_42 463682 : 466224 2 Mycobacterium_phage(50.0%) NA NA
DBSCAN-SWA_43 488966 : 489950 1 Xanthomonas_phage(100.0%) NA NA
DBSCAN-SWA_44 496135 : 501155 3 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_45 513398 : 514047 2 Mannheimia_phage(50.0%) NA NA
DBSCAN-SWA_46 518705 : 524872 6 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_47 529527 : 530238 1 Bradyrhizobium_phage(100.0%) NA NA
DBSCAN-SWA_48 538802 : 540763 2 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_49 548511 : 555816 6 uncultured_Mediterranean_phage(75.0%) tRNA NA
DBSCAN-SWA_50 559593 : 560994 1 Phage_TP(100.0%) NA NA
DBSCAN-SWA_51 575842 : 581564 4 Orpheovirus(33.33%) NA NA
DBSCAN-SWA_52 592812 : 594243 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_53 600334 : 601552 1 uncultured_virus(100.0%) transposase NA
DBSCAN-SWA_54 610886 : 612104 1 uncultured_virus(100.0%) transposase NA
DBSCAN-SWA_55 617068 : 619138 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_56 634125 : 648965 10 Vibrio_phage(20.0%) tRNA NA
DBSCAN-SWA_57 664884 : 696990 26 Prochlorococcus_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_58 701020 : 702520 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_59 708745 : 711660 2 Micromonas_pusilla_virus(50.0%) NA NA
DBSCAN-SWA_60 715392 : 718064 3 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_61 721454 : 725472 4 Cyanophage(50.0%) NA NA
DBSCAN-SWA_62 730421 : 749997 17 Klebsiella_phage(14.29%) protease,tRNA NA
DBSCAN-SWA_63 756581 : 765774 6 uncultured_Caudovirales_phage(20.0%) NA NA
DBSCAN-SWA_64 774617 : 775628 1 Burkholderia_phage(100.0%) transposase NA
DBSCAN-SWA_65 794375 : 801372 6 Chrysochromulina_ericina_virus(33.33%) NA NA
DBSCAN-SWA_66 815523 : 827772 13 Streptococcus_phage(40.0%) NA NA
DBSCAN-SWA_67 830839 : 831850 1 Burkholderia_phage(100.0%) transposase NA
DBSCAN-SWA_68 838394 : 839612 1 uncultured_virus(100.0%) transposase NA
DBSCAN-SWA_69 852275 : 876798 17 Bacillus_phage(25.0%) tRNA NA
DBSCAN-SWA_70 880438 : 882271 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_71 894369 : 902418 5 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_72 908066 : 970500 54 uncultured_virus(20.0%) integrase,transposase attL 943430:943444|attR 973259:973273
DBSCAN-SWA_73 975329 : 976799 2 Burkholderia_phage(50.0%) NA NA
DBSCAN-SWA_74 983288 : 983954 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_75 991067 : 996623 5 Moraxella_phage(20.0%) NA NA
DBSCAN-SWA_76 999894 : 1005950 4 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_77 1009697 : 1010951 1 Mycobacterium_phage(100.0%) transposase NA
DBSCAN-SWA_78 1017726 : 1026194 7 Tupanvirus(25.0%) tRNA NA
DBSCAN-SWA_79 1036576 : 1138804 101 Pseudomonas_phage(15.56%) capsid,integrase,portal,transposase,terminase,head,holin,tRNA,protease,tail attL 1046036:1046052|attR 1125053:1125069
DBSCAN-SWA_80 1146256 : 1149824 4 Acidithiobacillus_phage(50.0%) NA NA
DBSCAN-SWA_81 1156816 : 1161204 3 Escherichia_phage(66.67%) transposase NA
DBSCAN-SWA_82 1164206 : 1164827 1 Cassava_brown_streak_virus(100.0%) NA NA
DBSCAN-SWA_83 1179088 : 1182922 3 Colwellia_phage(33.33%) NA NA
DBSCAN-SWA_84 1186289 : 1191019 4 Pandoravirus(50.0%) NA NA
DBSCAN-SWA_85 1201226 : 1201931 1 Xanthomonas_phage(100.0%) NA NA
DBSCAN-SWA_86 1208476 : 1209580 1 Phage_Gifsy-1(100.0%) transposase NA
DBSCAN-SWA_87 1214029 : 1214668 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_88 1219022 : 1226239 8 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_89 1236755 : 1237499 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_90 1248683 : 1254839 5 Mollivirus(50.0%) NA NA
DBSCAN-SWA_91 1262077 : 1275849 13 Tupanvirus(28.57%) NA NA
DBSCAN-SWA_92 1296729 : 1297260 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_93 1300886 : 1306393 5 Pandoravirus(33.33%) NA NA
DBSCAN-SWA_94 1311096 : 1311477 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_95 1316578 : 1319225 2 Anomala_cuprea_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_96 1323756 : 1325826 1 Ralstonia_phage(100.0%) NA NA
DBSCAN-SWA_97 1335496 : 1337699 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_98 1348265 : 1360032 10 Agrobacterium_phage(33.33%) protease,tRNA NA
DBSCAN-SWA_99 1372641 : 1377218 4 Lake_Baikal_phage(33.33%) NA NA
DBSCAN-SWA_100 1380419 : 1384825 4 Streptococcus_phage(25.0%) NA NA
DBSCAN-SWA_101 1388092 : 1392499 5 Brucella_phage(33.33%) NA NA
DBSCAN-SWA_102 1398212 : 1400936 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_103 1405106 : 1412963 8 uncultured_Mediterranean_phage(25.0%) NA NA
DBSCAN-SWA_104 1418811 : 1433649 16 uncultured_Mediterranean_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_105 1441147 : 1446501 6 Escherichia_phage(66.67%) transposase NA
DBSCAN-SWA_106 1453695 : 1465467 8 Salmonella_phage(40.0%) NA NA
DBSCAN-SWA_107 1475902 : 1485692 7 uncultured_virus(25.0%) tRNA NA
DBSCAN-SWA_108 1500582 : 1507467 8 Lactococcus_phage(20.0%) transposase NA
DBSCAN-SWA_109 1512373 : 1518468 4 Faustovirus(33.33%) NA NA
DBSCAN-SWA_110 1522854 : 1527121 3 unidentified_phage(50.0%) protease,tail NA
DBSCAN-SWA_111 1531076 : 1537252 5 Agrobacterium_phage(33.33%) NA NA
DBSCAN-SWA_112 1542703 : 1545704 2 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_113 1554640 : 1555762 1 Mycoplasma_phage(100.0%) NA NA
DBSCAN-SWA_114 1568560 : 1570273 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_115 1575374 : 1580932 6 Catovirus(50.0%) NA NA
DBSCAN-SWA_116 1591394 : 1592189 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_117 1599793 : 1601728 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_118 1612216 : 1613101 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_119 1618309 : 1620400 3 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_120 1629889 : 1632967 3 Tupanvirus(50.0%) tRNA NA
DBSCAN-SWA_121 1639190 : 1641800 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_122 1646024 : 1653194 8 Burkholderia_phage(33.33%) transposase NA
DBSCAN-SWA_123 1669440 : 1671981 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_124 1683614 : 1684832 1 uncultured_virus(100.0%) transposase NA
DBSCAN-SWA_125 1692446 : 1693658 1 Agrobacterium_phage(100.0%) NA NA
DBSCAN-SWA_126 1700704 : 1707476 7 Agrobacterium_phage(33.33%) protease NA
DBSCAN-SWA_127 1714192 : 1716320 2 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_128 1723632 : 1789871 61 Burkholderia_phage(21.43%) transposase NA
DBSCAN-SWA_129 1795775 : 1797773 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_130 1801734 : 1806821 4 Tupanvirus(50.0%) tRNA NA
DBSCAN-SWA_131 1811161 : 1811842 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_132 1815748 : 1817488 1 Aureococcus_anophage(100.0%) NA NA
DBSCAN-SWA_133 1845917 : 1847717 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_134 1852233 : 1852821 1 Clostridium_phage(100.0%) NA NA
DBSCAN-SWA_135 1855911 : 1872350 18 Mycoplasma_phage(12.5%) NA NA
DBSCAN-SWA_136 1879288 : 1880245 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_137 1890841 : 1935721 38 Burkholderia_phage(27.27%) coat,tRNA,transposase NA
DBSCAN-SWA_138 1940862 : 1943922 3 uncultured_virus(33.33%) NA NA
DBSCAN-SWA_139 1951710 : 1952967 1 Phage_21(100.0%) NA NA
DBSCAN-SWA_140 1961606 : 1964807 3 Indivirus(50.0%) transposase NA
DBSCAN-SWA_141 1971358 : 1973086 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_142 1985321 : 1986746 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_143 1994866 : 2000546 5 Prochlorococcus_phage(33.33%) NA NA
DBSCAN-SWA_144 2004900 : 2012270 9 uncultured_virus(40.0%) NA NA
DBSCAN-SWA_145 2016297 : 2017138 2 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_146 2023153 : 2024086 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_147 2030362 : 2031772 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_148 2037843 : 2043782 6 Tupanvirus(25.0%) NA NA
DBSCAN-SWA_149 2050491 : 2066078 16 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_150 2076925 : 2078092 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_151 2088340 : 2092285 5 Corynebacterium_phage(25.0%) NA NA
DBSCAN-SWA_152 2102265 : 2103543 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_153 2110479 : 2116778 2 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_154 2120302 : 2121370 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_155 2127469 : 2128729 1 Stx2-converting_phage(100.0%) NA NA
DBSCAN-SWA_156 2135481 : 2136363 1 Rhodococcus_phage(100.0%) NA NA
DBSCAN-SWA_157 2140271 : 2142068 1 Catovirus(100.0%) tRNA NA
DBSCAN-SWA_158 2155053 : 2155458 1 Pseudomonas_phage(100.0%) protease NA
DBSCAN-SWA_159 2160755 : 2162747 2 Pithovirus(50.0%) NA NA
DBSCAN-SWA_160 2171580 : 2172375 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_161 2175561 : 2183222 7 Planktothrix_phage(25.0%) NA NA
DBSCAN-SWA_162 2199960 : 2200713 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_163 2208100 : 2209204 1 Phage_Gifsy-1(100.0%) transposase NA
DBSCAN-SWA_164 2223881 : 2225402 1 Aeromonas_phage(100.0%) NA NA
DBSCAN-SWA_165 2232333 : 2236887 4 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_166 2242485 : 2243784 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_167 2248106 : 2253391 5 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_168 2270658 : 2279105 7 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_169 2282926 : 2285482 1 Acanthamoeba_polyphaga_lentillevirus(100.0%) NA NA
DBSCAN-SWA_170 2289661 : 2290474 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_171 2294083 : 2297465 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_172 2309213 : 2310446 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_173 2329809 : 2338202 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_174 2342097 : 2345887 3 Vibrio_phage(33.33%) NA NA
DBSCAN-SWA_175 2354404 : 2355622 1 uncultured_virus(100.0%) transposase NA
DBSCAN-SWA_176 2363035 : 2364547 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_177 2367793 : 2368872 1 Leptospira_phage(100.0%) transposase NA
DBSCAN-SWA_178 2373778 : 2374789 1 Burkholderia_phage(100.0%) transposase NA
DBSCAN-SWA_179 2383685 : 2387306 2 Rhizobium_phage(50.0%) NA NA
DBSCAN-SWA_180 2391290 : 2393150 1 Virus_Rctr197k(100.0%) NA NA
DBSCAN-SWA_181 2396172 : 2399574 2 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_182 2413382 : 2422790 8 Ostreococcus_lucimarinus_virus(20.0%) transposase NA
DBSCAN-SWA_183 2432264 : 2433872 1 Pike_perch_iridovirus(100.0%) NA NA
DBSCAN-SWA_184 2451836 : 2457774 6 Tupanvirus(33.33%) NA NA
DBSCAN-SWA_185 2461042 : 2469307 10 Moumouvirus(20.0%) NA NA
DBSCAN-SWA_186 2480936 : 2486956 3 Burkholderia_phage(50.0%) plate,transposase NA
DBSCAN-SWA_187 2508638 : 2510321 1 Organic_Lake_phycodnavirus(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage