CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP027433	Gordonia iterans strain Co17 chromosome, complete genome	14 crisprs	cas3,csa3,WYL,cas7,csb2gr5,csb3,cas1,cas2,RT,DinG,DEDDh	3	15	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP027433_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027433_1

284138-284207

Orphan

Consensus_repeat	Method
TCGACAAGCTCAAGGAGCTGGGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027433_1

>merge|CP027433|1|284138-284207|CRISPRCasFinder
TCGACAAGCTCAAGGAGCTGGGCGTCCCCTCGCTCGATGAAACCTCTCGACAAGCTCAAGGGGCTGGTCG

>CP027433|1|1|284138-284207|CRISPRCasFinder
TCGACAAGCTCAAGGAGCTGGGCG	TCCCCTCGCTCGATGAAACCTC
TCGACAAGCTCAAGGGGCTGGTCG

Protein	Signature genes	Signature genes Name	Protein_function
CP027433.1\|AVL99136.1\|289877_291974_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225927
CP027433.1\|AVL99135.1\|289441_289831_-\|steroid-delta-isomerase	unknown	unknown	gnl\|CDD\|238404
CP027433.1\|AVL99137.1\|292071_293268_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173847
CP027433.1\|AVL99124.1\|275539_276958_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235434
CP027433.1\|AVL99125.1\|277079_278726_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
CP027433.1\|AVL99133.1\|287896_288574_+\|short-chain-dehydrogenase	unknown	unknown	gnl\|CDD\|181298
CP027433.1\|AVL99132.1\|286183_287893_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377378
CP027433.1\|AVL99139.1\|295572_297726_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379231
CP027433.1\|AVL99123.1\|274197_275418_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|226951
CP027433.1\|AVL99138.1\|293266_295522_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224208
CP027433.1\|AVL99128.1\|281279_282527_-\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|179663
CP027433.1\|AVL99127.1\|280107_281145_+\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176191
CP027433.1\|AVM01928.1\|272397_273123_+\|response-regulator	unknown	unknown	gnl\|CDD\|223855
CP027433.1\|AVL99134.1\|288727_289414_-\|haloacid-dehalogenase-type-II	unknown	unknown	gnl\|CDD\|319787
CP027433.1\|AVL99126.1\|278695_279997_-\|TrpB-like-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|237087
CP027433.1\|AVL99140.1\|297749_298835_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378522
CP027433.1\|AVL99131.1\|284713_286120_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224154
CP027433.1\|AVL99130.1\|283331_284123_+\|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|213873
CP027433.1\|AVL99129.1\|282650_283265_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
CP027433.1\|AVL99122.1\|273166_274201_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP027433.1\|AVL99136.1\|289877_291974_-\|hypothetical-protein	gnl\|CDD\|225927	COG3392, COG3392, Adenine-specific DNA methylase [DNA replication, recombination, and repair].	5.30401e-71
CP027433.1\|AVL99135.1\|289441_289831_-\|steroid-delta-isomerase	gnl\|CDD\|238404	cd00781, ketosteroid_isomerase, ketosteroid isomerase: Many biological reactions proceed by enzymatic cleavage of a C-H bond adjacent to carbonyl or a carboxyl group, leading to an enol or a enolate intermediate that is subsequently re-protonated at the same or an adjacent carbon. Ketosteroid isomerases are important members of this class of enzymes which are the most proficient of all enzymes known and have served as a paradigm for enzymatic enolizations since its discovery in 1954. This CD includes members of this class that calalyze the isomerization of various beta,gamma-unsaturated isomers at nearly a diffusion-controlled rate. These enzymes are widely distributed in bacteria.	3.02883e-24
CP027433.1\|AVL99137.1\|292071_293268_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	4.76542e-74
CP027433.1\|AVL99124.1\|275539_276958_-\|argininosuccinate-synthase	gnl\|CDD\|235434	PRK05370, PRK05370, argininosuccinate synthase; Validated.	0
CP027433.1\|AVL99125.1\|277079_278726_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	2.30285e-69
CP027433.1\|AVL99133.1\|287896_288574_+\|short-chain-dehydrogenase	gnl\|CDD\|181298	PRK08219, PRK08219, SDR family oxidoreductase.	2.80918e-104
CP027433.1\|AVL99139.1\|295572_297726_+\|hypothetical-protein	gnl\|CDD\|379231	pfam13515, FUSC_2, Fusaric acid resistance protein-like.	1.65715e-17
CP027433.1\|AVL99132.1\|286183_287893_+\|hypothetical-protein	gnl\|CDD\|377378	pfam04536, TPM_phosphatase, TPM domain. This family was first named TPM domain after its founding proteins: TLP18.3, Psb32 and MOLO-1. In Arabidopsis, this domain is called the thylakoid acid phosphatase -TAP - domain and has a Rossmann-like fold. In plants, the family resides in the thylakoid lumen attached to the outer membrane of the chloroplast/plastid. It is active in the photosystem II.	1.01873e-19
CP027433.1\|AVL99138.1\|293266_295522_+\|hypothetical-protein	gnl\|CDD\|224208	COG1289, COG1289, Predicted membrane protein [Function unknown].	9.43672e-12
CP027433.1\|AVL99123.1\|274197_275418_-\|ATP-binding-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.84992e-14
CP027433.1\|AVL99127.1\|280107_281145_+\|NADP-dependent-oxidoreductase	gnl\|CDD\|176191	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	6.95274e-63
CP027433.1\|AVM01928.1\|272397_273123_+\|response-regulator	gnl\|CDD\|223855	COG0784, CheY, FOG: CheY-like receiver [Signal transduction mechanisms].	0.00723344
CP027433.1\|AVL99134.1\|288727_289414_-\|haloacid-dehalogenase-type-II	gnl\|CDD\|319787	cd02588, HAD_L2-DEX, L-2-haloacid dehalogenase. L-2-Haloacid dehalogenase catalyzes the hydrolytic dehalogenation of L-2-haloacids to produce the corresponding D-2-hydroxyacids with an inversion of the C2-configuration. 2-haloacid dehalogenases are of interest for their potential to degrade recalcitrant halogenated environmental pollutants and their use in the synthesis of industrial chemicals. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.43805e-43
CP027433.1\|AVL99126.1\|278695_279997_-\|TrpB-like-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|237087	PRK12391, PRK12391, TrpB-like pyridoxal phosphate-dependent enzyme.	0
CP027433.1\|AVL99140.1\|297749_298835_+\|hypothetical-protein	gnl\|CDD\|378522	pfam10974, DUF2804, Protein of unknown function (DUF2804). This is a family of proteins with unknown function.	3.47051e-43
CP027433.1\|AVL99131.1\|284713_286120_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|224154	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	4.10847e-77
CP027433.1\|AVL99128.1\|281279_282527_-\|DNA-polymerase-IV	gnl\|CDD\|179663	PRK03858, PRK03858, DNA polymerase IV; Validated.	0
CP027433.1\|AVL99129.1\|282650_283265_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.3999e-16
CP027433.1\|AVL99130.1\|283331_284123_+\|LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|213873	TIGR03856, F420_MSMEG_2906, probable F420-dependent oxidoreductase, MSMEG_2906 family. This model describes a small family of enzymes in the bacterial luciferase-like monooxygenase family, which includes F420-dependent enzymes such as N5,N10-methylenetetrahydromethanopterin reductase as well as FMN-dependent enzymes. All members of this family are from species that produce coenzyme F420; SIMBAL analysis suggests that members of this family bind F420 rather than FMN. [Unknown function, Enzymes of unknown specificity].	1.20187e-159

>CP027433.1|AVL99130.1|283331_284123_+|LLM-class-F420-dependent-oxidoreductase
MAFRTRIGVQLQPQHAPDYGLLRDAVVRAEDLGVDVIFNWDHFYPLYGDPEGAHFECWTMLGAWAEQTERVEFGPLVTCNSYRNPDLLADMARTVDHISGGRLILGIGSGWFERDYDEYGYSFGTKGSRLDALGESLPRITARVSELNPVPVRDIPIMIGGGGPKKTLPLVAEYASIWHSFVSVDTYREKSVLLDGYCADLGRDPSTIERSAEIRYDGDVAKTLGFADAITAEGVSLLTVATGGPDYDLSAAKLLCEWRDRNR
>CP027433.1|AVL99129.1|282650_283265_-|class-I-SAM-dependent-methyltransferase
MSHDHGHPPNSAAEWDERYGSADRLWTAQANPALVREVAGLPAGRALDVGSGEGADARWLADQGWTVVAVDISQVALERAAKMDSRETISWVRADLAVDDVPGEAFDLVALHYFPVPIEREDVIAKLVDALAPGGTLLVVAHDPQGIRAHGHDPDAYFQPVDVAQRFADRIEVQRLETVERGRPAGGASGQRHMNDVVLKARRR
>CP027433.1|AVL99128.1|281279_282527_-|DNA-polymerase-IV
MRIERVERSQASILHADLDSFYASVEQRDDPALRGRPVLVGGGVVLAASYEAKACGVHTPMPGREARALCDARLGRGRAVTVPPRFAAYVEASRAVFDVFHDTTPIVEGISVDEAFLDVGGLRKISGSPLEIGARLRERVRCDVGLPITVGVARTKFLAKVASGAGKPDGLLEVPPDAELAFLHPLPVRKLWGVGVKTEQRLAEAGVHTVGEMAALGESGLSALLGRSGGRHLYALAMARDPRRVETGRRRTSIGAQRALGRRITDEGDVETTLIAIVDGLGKRLRGADRLCRTVVLRLRFDDYERATRSRSFSEPTDSTAAILASARGLFDEARPLIRDRGCTLIGLSLANLVRQGALQLALPFDEETGEVGVNHAADLDLAIDDLKNRFGRDAVTRGRLVGRHHGDDAPMLPD
>CP027433.1|AVL99127.1|280107_281145_+|NADP-dependent-oxidoreductase
MTTASSWTAHGFGGLADLVLEAREVPTPGPGEITVRIVAAGVNPADLKHVLRASDPALLPMPLGYEIAGTVTAAGPGSRWAIGDRVVAFRVRGGYAEALTVPATDAFALPDHVDERAAAGLLLAGCTAAELLDRSGARPGETVLVHGTSGAVGVALLQLARLRGVRVVGTCAPSRLQEVRRFGGIPVPYRDEGGTTTDGGRLGRPGRMLDDGALHDGELRDGPILDGSALADRIRAAAPGGVVAALDTAGTDAAVAASLGLVADRSRILTVAAPAAAREHGFTALSGADPASAAYRDSVRAELVSLLADGELEVPVAQTFPLTRAREALDLVASGGAHGKVVLLP
>CP027433.1|AVL99126.1|278695_279997_-|TrpB-like-pyridoxal-phosphate-dependent-enzyme
MTSNVDATNPDLVTIDVPTHWYNLAAELDEPVPPHLHPGTKEPVGPDDLAALFPAGLIAQEVTSEAYVEIPEPVREIYKMWRPSPLLRARNFEKALNTKARIYVKYEGVSPVGSHKTNSAVAQAYYNSIDGVKKLTTETGAGQWGSALAFAGAQFGIDVEVWQVRASYDSKPYRGYLIRTYGGTLHPSPSDLTESGRAMLAKDPNTTGSLGMAVSEAVEVAARSDDTRYALGSVLNHVVLHQSVIGQEAVDQLYAVEPGGADVVFGCAGGGSNLAGLSFPFLREKIHGRSDPRIVAAEPAACPSITRGEYRYDHGDVAGLTPLLKMHTLGMDFVPDPIHAGGLRYHGMAPALSHTVELGLVQGVAIDQHDAFSAGVQFARTQGIVPAPESTHAIAACAAHVANSDTEQVVVIGLSGHGQLDLPAYAAFLDGGF
>CP027433.1|AVL99125.1|277079_278726_+|MFS-transporter
MTASTPASTAPPPSPEQPGPRRWWALGVLSVGLAMIVMDGTIVAVSLPTIIDDLHLDLTDAQWVNSLYSVILAALLLTCAALGDRFGRRKLFIVGILLFVGGSIWAATASDAGTLISARVLQGFGGACILPSTLSTVSDTFRGKDRAAAFGVWGAVISGAAALGPLLGGWLTSTFSWQWIFGVNVPVGAVLVIAALIVVPETKSPSTRRGFDVDGLLLSVVGFGSLVFAVIEANTLGWWKPISDLHLFGWTWSRDMPVSIVPVALLVSAVALTTFLVWERHRARVRRSALLDLNLFFTPTFSWGNVAAMMIAVGEFGLIFVLPLYLINAVGLGTMGAGFVLAAMAAGAFVSGALARHLAALIGAAGTVLVGVALEVIGVLTLAFTIHPGSSGWSIGGVLLIYGVGLGFASAQLTSTVLRDIPVAASGQGSATQSTVRQIGSAFGSAIMGSVLSIGLAHFLGRLTGPAVEFADATRSSAGGVISGLREHGGDAGVVFALSDAFTQATRWAMFATSVFLVLGLLAAAAVWVAARRTATPADQKPPSRNAA
>CP027433.1|AVL99124.1|275539_276958_-|argininosuccinate-synthase
MSKVLSSLPIGERVGIAFSGGLDTSVAVAWMREKGAVPCTYTANLGQYDEPDIDSVPGRALQYGAELSRLVDCRAALVEEGIAALQCGAFHIRTAGKAYFNTTPLGRVVTGMLLVRAMKEDGVNIWGDGSTYKGNDIERFYRYGLMANPNLQIYKPWLDADFVEELGGRTEMSEWLLARDLPYRDSAEKAYSTDANIWGATHEAKVLEHLDQGLDIVEPIMGVAAWREDVDVPTEEVTLTFEQGRPVAINGERFDSAVDLVMKANEIGGRHGLGVSDQIENRIIEAKSRGIYEAPGMALLHIGYERLVNAIHNEDTVANYHNEGRRLGRLMYEGRWMDSQALMLREALVRWVASAITGEVTVRLRRGDDYQFLNTTGPSLSYHPDKLSMERVGDSAFGPKDRIGQLTMRNLDIADSRARLEQYAELGIVGGATADLVGELSEGGAAAIAGGEGPEDDAEVALDRAAMEFGVD
>CP027433.1|AVL99123.1|274197_275418_-|ATP-binding-protein
MRGGDTGSTDDGDALRDDANFERILRMFARFASVGYVAYLVLLLPEIARLEPLMASWWTPVMVGAVFVPGFLLGAVSFLRDTRLTRVFAAVAAMTFMIATLSWRTAWDGTPMSGDQGVWLAAFPGLAAIAAVVAWRAWPAFAYMVVACVSVQLVNFVVRGSRDAYLLLPDILFAIMFCSLFVGGSIMALRTGRLLDESTEEAHATAAATAAQRARAVERERFDGLTHDSVMSTLLIAARGGSSETVRQLAAGTLAELDDIRNGDDSDRPFDLRQAVVHLRVAATEADPGAAFEFVDQSEGRLDAGDGIPADVVRSLGAAQAEALRNCVRHAGDDAYREVVVIARPDGLRVQVSDDGAGFDPGAVPAQRLGITVSIRRRMARVPGGWAQVSSKPGHGTSVRLGWDRS
>CP027433.1|AVL99122.1|273166_274201_-|hypothetical-protein
MSTQPIVGDVRELLGLRTPAARLLVGWFVLTYLVVFAVTPPADPAATAVEALAWLLVSAAAYTFIRAPGDPLPLRWTWLIAVAGPIASTLVLAVIPYPIDTFLQTWPLSATAALSAYLAVRGRVWWGWASTSSAVGACIGWAVLSGQGAGYGAQISLINFAPLIMASFFVLTIRPAAREIFELRRRATEAAAAGAAQAAVLEERDRQLARLDERARPMLERLTDETPVAARDRLQCALVEAQLRDSLRAPILDVPAVADAAGEARTRGVDVVLLDDHGLDGAPREVRERIVDAVVTAIEDMPEGVLTVRVLPPGRDVAMTIVRTVDQPVRSEFNSDGRLVTTVG
>CP027433.1|AVM01928.1|272397_273123_+|response-regulator
MAAGLRILIASPLGRVISAPLQNAFDDVTVSVATTDDELTSMISGTVRYDVVAADLIWNDPALEWRFDGLDVIDRLRQAERAAPVLLATQGHSMEADHLEEARLRPEVFGVIPKAAGLQAIMDGLRLAALGRRLPPPPGPTPKRTPLYELFDDRRGQTAARMAGAIAAGRAADNASLATVAKVSPSTANKVTSHYLGPMITARGEHDDRLPLTQGVIYRWCGLHARYLTSWCRRNGHSDVL
>CP027433.1|AVL99131.1|284713_286120_-|FAD-dependent-oxidoreductase
MRYDDVVIGAGPNGLTAAALLARAGRRVLVLESGPTVGGGARTDEAFGTGIRRDVCSAVHPTGLASPAFADLALSGHGLEWVVPRYSLMHGFAPDRALGLARDRREREAELGRSWERAVGWAGRAPGLVADVFELPRPPRRPLSTARFAASAGLPVAAFTRAAFRDDVVRTVFAAIAAHGARPSSAPASTAAGLLLAALGEPGWPVARGGSQSISDALAAVVVGHGGTIETGCAITDSAQLPAPARWFFDTSPRTFVEIMGERLPARYRRRLERFRYGPGTCKVDFRLSEPIPWADPRFSETATFHLAADSRQVAVAESDASAGRIPLRPWVLGGEPTRIDSSRAPSGTHLAWAYCHVPARCDVDVSESIIAEIERCAPGFRDVIVGRIVTTGAAQERYNANFVGGDIGCGATTLRQLLARPVPSPNPQVTPVPGVYLCSAATAPGGGVHGMSGYRAARHALAAPAAP
>CP027433.1|AVL99132.1|286183_287893_+|hypothetical-protein
MPRARRRVIALPALSLVFALLACLLLPASARAEAPAQMPAQVVDVADVLTAAQESEIVDAVDDLAARENLQLWVIYVRDFDGMTPEEWGRQTQQLSELSYRDVLLAVSVTDRAYYFGSADTIDDLPESRLNEIARATVEPAVRDGEWSDAALDASNRLAGVESRRALYAIVGGLVVIATIAGLIVFFSRRSTNADVTDDSPNGDDPLTVDQLTQLPITALDPWATERLTSTDNAVSVSADELILAEEEFGADRVAAFRAALTTAESAVATAFALRHDVDRGGAGHEEQRDRLVQIISICSDADRALDAQTAAFDALRDLVPDAAARLDRLAERSAALAERRTESSGQEAYLAENFGGPIVESVGGNLTLASDLISFADDSIAQGREAVADQADKRLPTVAAIRSAESALDTAAKLLDALTDASQNLVLLAQDPDPLARATAEVAAAESFIDTRRGAVGTRARTFLSEAERLLHEAHPDRGGRGAGAAELSAALADEALLLGRRDVAAWLESSGDDGTPVLTGVLVDAVVPTTADVPVDLGNGGYSSGGRTPGSFGGSDTSGRIGTGGRR
>CP027433.1|AVL99133.1|287896_288574_+|short-chain-dehydrogenase
MPTALITGASRGIGAQVARALAPTHDLILAGRDAARLEVVAAELGGARTVTVDLTDSGGTLATAVGEIIELDALVHCAGIASSLHPVAETTPAEWRRLMDVNVIAAAELTRLLLPALRARGGHVVFLNSGAGQNVRASWTPYAASKFALRALADGLRAEEPELRVTSVYPGRVDTDMQRGIVAIEGRDYDASRFLRPETVALAVAQAIAAPSDAHPTDLTLRPRG
>CP027433.1|AVL99134.1|288727_289414_-|haloacid-dehalogenase-type-II
MEYDAYIFDVQGTILDFYGPVARALDAEFTARGVVVPVGDVVRAWRQDYFERVAALDQTVDRWHPVQRVYQDGLSDVSETYDVEIEPARRAGLAASWQQLEPWPDVRDGLRRLRERALTATLSNTDMATMVRLFKELRIDWDAVLTAEVFGAFKPAPALYERTCRYLGVEPGRAAMVASHPYDLRAAKAVGLNTIFVYRPFEFGSVEFAVDDVDGEFDHRITDLRQIP
>CP027433.1|AVL99135.1|289441_289831_-|steroid-delta-isomerase
MRSGVLMGAQQQVEAVDAYIDLLSNGTAEQIVGLYADGATVEDPIGAPIRRTREELIEFYSIITNLDSREATLKWAKVAGDTAVFEFTLVTGTAGMSFEITPIDIMVFDDAGKIVSMRAVWEQSDLKQL
>CP027433.1|AVL99136.1|289877_291974_-|hypothetical-protein
MKTFQLRNRRYLGSKRAVLPVIGEVIAALPEPPQTAADLFAGTGVVGESLARAGLAVTFNDLLSSNTTVYRAFFGPGELRGDRLAEFVGRINDVDPASLPADYFSQTFGGTYFSDANSRLIGHYRERIERWHADGAINERERAALIASLLYGMDRAAATVGHYDAFREGAATDARLVFGLPETEVFKQTHRITRADANNLVRQHRWDLVYIDPPYNSRQYGDLYHVLDNVTDWKQGPVRFKARKMDRRHLKSDYCTVQAVAAFSDLIAALDTSTIVMSYNDTGARGNARSAARLTDDDILSAMRRRGRVEVVDVPHREFTTGKSGIGDIVERLFVCHVGDGAVVSFNDAGLVSSRARTSPGSTSDLNSTGGSSSLVEPGANGVSAGVETITPPLVRSPLNYTGNKKRLVGDIVPLLPVQSERHRRFVDVFGGSMTVGMNAGYGDVVFNDVQVDVVGLGEMFRDTAYADVVAGVESVVAEYGLSDSRAHGYGVYGTNSSSGLGQVNKESYLRLRADFNRMDPADPRRPAVFFTLVVFGFNNQIRYNRSGEFNMPVGKRDFNSRVRKNLYDTVTRMHRLHPELWTLDFRDVFGKLETTDLAYCDPPYLLGTAPYNEQNAWTSDDETALLDELAGFADRGGTFGLSNVLSHKGSEHGQLAQWAAEHGFVVHPLDYSYANASYQRKRRDASREVLITNWKAD
>CP027433.1|AVL99137.1|292071_293268_-|acyl-CoA-dehydrogenase
MAINLELPEKLNSTVERARLAAEHLFRPISRKYDAAEHEYPTELDELGKLAKQARAQERSAESGTSDAGSEDTVNGANLRSVLSARELGWGDVGLMLSIPGQGLGNAAIAAVADEEQLERFGDVWAAMAITEPGFGSDSAAVTTTAVLDGDEYVINGEKIFVTCGSRADHVVVWATLDKSLGRAAIKSFVVPLDAKGVEVARLEEKLGIKASDTAVVVFTDVRVPKENLLGSPEIDVKKAFGGVMQTFDNTRPVVAAMAVGVGRAALEELRRMLEESGNPVDYDRPAASQHASVAEFIRLESDWEASWLHTLRAAWMADNSEPNSLEASMSKAKAGRTVTDVTNKAVEIGATQAYGETELLEKWARDSKILDIFEGTQQIQQLIIARRVLGKSSTDLK
>CP027433.1|AVL99138.1|293266_295522_+|hypothetical-protein
MAATLLLGKLEAKGEFPPTSQSRRADSARLGAVQHATTQWRRRLSASDPGHARLTNTLAVTAAVLVSTGASWLIVRHELADRGFFASAILLTVQLAMTVDDDTPRGRLATSAAALVPMVAAPAAAALLDQWRGIEIAFFIALAGLAIWLRRFGSRSGTLGMVAFFAYFYALVLRPPPSQLPGYLLLMACVTGGVVLVRLLLLHERPGRQLAILLSELRAASAAALTAATGAVPGTDRFRLLKGRLRAVDSVAWAIAGWQSRFPTADVVDCTDRTLRNRTLDARIDVEHAALEVSALVHSRGPGVLTGPLHHALDDLALMLDDAPSSAWKDAADRARRQRTAAADDLPAGLATYLTARSTLAHWALRTIDLNAPYRDDSSGVDVATVSDSSPTAGPPVTPRSAAPTGAAGPSRAFWRTWAPSTRMAVQAMVAAGLATVVGEAIDASRWYWAVMASFMIFVGTTRSSVLTRASRRVIGTGAAVALGIVVAVVLDGPSYWHLLIGLAGVIGAFYLGPLNQIYSAFFLTLLVVSQYGLLGVLDPRLMTLRLEETVAGMAVGVLCAFLVFSTDSKHALAAAVTAYLDALTTLVRGIGAAMTRPGQTGALLAAAAALDRAQEKLDAIVGSMSLSFVNGRRSRVTTLTHLMRVASRSAEHAAQSAIHVTDRAPGEQLGGAGADVFEGAVAHVVENAARARAVLVDGAASTADPEDTSVADACAQLRSAAEATPSHALLLLTRVDWALVSACQIRSKGA
>CP027433.1|AVL99139.1|295572_297726_+|hypothetical-protein
MQLHTPYWRRLLVATDPGRVRVTTATATAISVLVTSLVAWSLVVFAEADHGVLAMGVIMTLQAALNVKDPTARGRLLTTVLLVPPAFAALTAAVLLSSRRPVEIVVFIALTGVVTYLRGFGPRATAIGTVTFFAYFFALLLQPKADELPLLFLVTGCAVTCMLVIRLFGIWGRPRHQLALLLTELRGAGSTALTEAVNAPPATALTQASRVQRVDQVARTIDDWQTRYSTARYVRCDAQTFARLVLDARIDMDHACRKIAEFRAGGDRVESGRLTAPAVTDLSAVLSSATSPADVREAAERAHTRLTSPGADTPDEVTAGAADRATLAFARLRDLDLHHGLDATATSAEIRRRHPEPQRRTAPSPAASSRWKPWLRWRVTTRMAVQVVIAASLASVVGYSISASRWYWAVLTAFLVFAGTTTRGAILTRATRRITGTVAGVIVGLALVVLVDGNIPALIVICVLAVFFALYLGPLQYTVMSLFITILLAGLYGLLGVLNRHILELRLIETLAGAALGVVCAYLIFSTSSHPALTARIDAYFDTLDRLLNAVRRTLAGHAGTGELVASIRSMDAAQADLHTTVDGMSLSLAVGHRAETAHLLRLLDLNSHIATRLGQSTMAFSSGTGDASTSSGSGSGSGDDLAPRFDHALAHVLASSATARAALVDGHTSSVDPDETAVIDCFGRLPGDPLSPQYEVVRTLSRLNWILLRSVQVRAS
>CP027433.1|AVL99140.1|297749_298835_+|hypothetical-protein
MSTPVYPPAPVSPPPALVEDGHYRFGTYDGPIPIVNPLDAGSRRSFDDTRRKRFDGVRRANRNLRLKEWEAFQLGDDDWFVLGAVYNAKTVGLIQVLAVNKHDASITRWETKMPAPTLSVARGLLGSSSRGRVADFRVEIGNHLERGRVTVDAHHPGRSDHPSMGLHVTGSCGPDDAAHLVVVHPFSADRALYSHKAMMPMDGSLVIGGEQVGFAPERGYLILDDHHGDYPRPMRYDWVTGIRRNDDGVIAGFNLTDNQVLDPAEFNENAIWIGNRLWRLPPVTVERPDGPWGTWHIRDVAGAVDVTFTPTVKSTMHVGPRKVLAEYYAPYGWYEGDLHADGVSLNVDGMFGVGEQKRITL

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Crispr_ID: CP027433_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027433_3

1001734-1001955

Orphan

Consensus_repeat	Method
NCGGTCGAGAAGATCGTC	CRT

5 spacers

The CRISPR arrays of CP027433_3

>merge|CP027433|3|1001734-1001955|CRT
ACCGTCGAGCGGCTCGTCGAGAAGCCGGTGGTGACCGTCGTCGAGCGGGAGGTCGAGGTCCCGGTCGAGAAGATCGTCGAGAAGATCGTCGAGGTCCCGGTCGAGAAGATCGTCGAGGTGCGGGTCGAGAAGCCGGTCGAGAAGATCGTCGAGAAGATCGTCGAGGTTCCGGTCGAGAAGATCGTCTACAAGATGGTCGAGAAAGAGGTCGAGAAGATCGTC

>CP027433|3|1|1001734-1001955|CRT
ACCGTCGAGCGGCTCGTC	GAGAAGCCGGTGGTGACCGTCGTCGAGCGGGAGGTCGAGGTC
CCGGTCGAGAAGATCGTC	GAGAAGATCGTCGAGGTC
CCGGTCGAGAAGATCGTC	GAGGTGCGGGTCGAGAAG
CCGGTCGAGAAGATCGTC	GAGAAGATCGTCGAGGTT
CCGGTCGAGAAGATCGTC	TACAAGATGGTCGAGAAA
GAGGTCGAGAAGATCGTC

Protein	Signature genes	Signature genes Name	Protein_function
CP027433.1\|AVM02016.1\|1004658_1005822_+\|alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176223
CP027433.1\|AVL99677.1\|1009226_1009868_-\|alpha-ketoglutarate-dependent-dioxygenase-AlkB	unknown	unknown	gnl\|CDD\|225687
CP027433.1\|AVL99678.1\|1009930_1011118_-\|putative-succinyldiaminopimelate-transaminase-DapC	unknown	unknown	gnl\|CDD\|236095
CP027433.1\|AVL99679.1\|1011125_1012772_-\|helicase	unknown	unknown	gnl\|CDD\|223989
CP027433.1\|AVL99668.1\|989994_991512_+\|wax-ester/triacylglycerol-synthase-family-O-acyltransferase	unknown	unknown	gnl\|CDD\|274360
CP027433.1\|AVL99681.1\|1015221_1015413_+\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVL99670.1\|994626_996645_-\|NAD(+)-synthase	unknown	unknown	gnl\|CDD\|235057
CP027433.1\|AVL99674.1\|1005948_1006503_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225228
CP027433.1\|AVL99680.1\|1012818_1015215_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379300
CP027433.1\|AVM02014.1\|996756_997239_+\|copper-resistance-protein-CopC	unknown	unknown	gnl\|CDD\|377255
CP027433.1\|AVL99671.1\|997246_998146_+\|copper-resistance-protein	unknown	unknown	gnl\|CDD\|224195
CP027433.1\|AVM02013.1\|993266_994355_+\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVL99667.1\|989347_989863_-\|polyketide-cyclase	unknown	unknown	gnl\|CDD\|378915
CP027433.1\|AVL99669.1\|991582_993274_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|223897
CP027433.1\|AVL99672.1\|999242_999881_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
CP027433.1\|AVL99673.1\|1003337_1004651_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377971
CP027433.1\|AVL99675.1\|1006592_1008335_+\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
CP027433.1\|AVM02015.1\|998269_999121_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|131480
CP027433.1\|AVL99676.1\|1008331_1009213_+\|short-chain-dehydrogenase	unknown	unknown	gnl\|CDD\|235737
CP027433.1\|AVL99666.1\|988141_989134_-\|acyl-ACP-desaturase	unknown	unknown	gnl\|CDD\|153109

Protein	Function_ID	Function_description	E-value
CP027433.1\|AVM02016.1\|1004658_1005822_+\|alcohol-dehydrogenase	gnl\|CDD\|176223	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.58794e-144
CP027433.1\|AVL99677.1\|1009226_1009868_-\|alpha-ketoglutarate-dependent-dioxygenase-AlkB	gnl\|CDD\|225687	COG3145, AlkB, Alkylated DNA repair protein [DNA replication, recombination, and repair].	1.46828e-23
CP027433.1\|AVL99678.1\|1009930_1011118_-\|putative-succinyldiaminopimelate-transaminase-DapC	gnl\|CDD\|236095	PRK07777, PRK07777, putative succinyldiaminopimelate transaminase DapC.	0
CP027433.1\|AVL99679.1\|1011125_1012772_-\|helicase	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	1.60164e-116
CP027433.1\|AVL99668.1\|989994_991512_+\|wax-ester/triacylglycerol-synthase-family-O-acyltransferase	gnl\|CDD\|274360	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase. [Unknown function, Enzymes of unknown specificity].	4.3778e-133
CP027433.1\|AVL99670.1\|994626_996645_-\|NAD(+)-synthase	gnl\|CDD\|235057	PRK02628, nadE, NAD synthetase; Reviewed.	0
CP027433.1\|AVL99674.1\|1005948_1006503_+\|hypothetical-protein	gnl\|CDD\|225228	COG2353, COG2353, Uncharacterized conserved protein [Function unknown].	6.7254e-57
CP027433.1\|AVL99680.1\|1012818_1015215_-\|hypothetical-protein	gnl\|CDD\|379300	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain. This domain family is found in a wide variety of helicases and helicase-related proteins.	1.41757e-36
CP027433.1\|AVM02014.1\|996756_997239_+\|copper-resistance-protein-CopC	gnl\|CDD\|377255	pfam04234, CopC, CopC domain. CopC is a bacterial blue copper protein that binds 1 atom of copper per protein molecule. Along with CopA, CopC mediates copper resistance by sequestration of copper in the periplasm.	3.24566e-21
CP027433.1\|AVL99671.1\|997246_998146_+\|copper-resistance-protein	gnl\|CDD\|224195	COG1276, PcoD, Putative copper export protein [Inorganic ion transport and metabolism].	4.16016e-06
CP027433.1\|AVL99667.1\|989347_989863_-\|polyketide-cyclase	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	1.17653e-05
CP027433.1\|AVL99669.1\|991582_993274_+\|SAM-dependent-methyltransferase	gnl\|CDD\|223897	COG0827, COG0827, Adenine-specific DNA methylase [DNA replication, recombination, and repair].	3.60555e-07
CP027433.1\|AVL99672.1\|999242_999881_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.69515e-10
CP027433.1\|AVL99673.1\|1003337_1004651_+\|hypothetical-protein	gnl\|CDD\|377971	pfam08310, LGFP, LGFP repeat. This 54 amino acid repeat is found in many hypothetical proteins. Several hypothetical proteins from C.glutamicum and C.efficiens along with PS1 protein contain this repeat region. The N-terminus region of PS1 contains an esterase domain which transfers corynomycolic acid. The C-terminus region consists of 4 tandem LGFP repeats. It is hypothesized that the PS1 proteins in Corynebacterium, when associated with the cell wall, may be anchored via the LGFP tandem repeats that may be important for maintaining cell wall integrity [Adindla et al. Comparative and Functional Genomics 2004; 5:2-16]. Deletion of Corynebacterium glutamicum csp1 protein results in a 10-fold increase in the cell volume of the organism and infers the corresponding proteins involvement in the cell shape formation. The secondary structure of each repeat is predicted to comprise two beta-strands and one alpha-helix [Adindla et al. 2004].	1.49172e-10
CP027433.1\|AVL99675.1\|1006592_1008335_+\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	3.03275e-36
CP027433.1\|AVM02015.1\|998269_999121_+\|alpha/beta-hydrolase	gnl\|CDD\|131480	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other].	6.95976e-32
CP027433.1\|AVL99676.1\|1008331_1009213_+\|short-chain-dehydrogenase	gnl\|CDD\|235737	PRK06197, PRK06197, short chain dehydrogenase; Provisional.	1.42257e-107
CP027433.1\|AVL99666.1\|988141_989134_-\|acyl-ACP-desaturase	gnl\|CDD\|153109	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain. Acyl-Acyl Carrier Protein Desaturase (Acyl_ACP_Desat) is a mu-oxo-bridged diiron-carboxylate enzyme, which belongs to a broad superfamily of ferritin-like proteins and catalyzes the NADPH and O2-dependent formation of a cis-double bond in acyl-ACPs. Acyl-ACP desaturases are found in higher plants and a few bacterial species (Mycobacterium tuberculosis, M. leprae, M. avium and Streptomyces avermitilis, S. coelicolor). In plants, Acyl-ACP desaturase is a plastid-localized, covalently ACP linked, soluble desaturase that introduces the first double bound into saturated fatty acids, resulting in the corresponding monounsaturated fatty acid. Members of this class of soluble desaturases are specific for a particular substrate chain length and introduce the double bond between specific carbon atoms. For example, delta 9 stearoyl-ACP is specific for stearic acid and introduces a double bond between carbon 9 and 10 to yield oleic acid in the ACP-bound form. The enzymatic reaction requires molecular oxygen, NAD(P)H, NAD(P)H ferredoxin oxido-reductase and ferredoxin. The enzyme is active in the homodimeric form; the monomer consists mainly of alpha-helices with the catalytic diiron center buried within a four-helix bundle. Integral membrane fatty acid desaturases that introduce double bonds into fatty acid chains, acyl-CoA desaturases of animals, yeasts, and fungi, and acyl-lipid desaturases of cyanobacteria and higher plants, are distinct from soluble acyl-ACP desaturases, lack diiron centers, and are not included in this CD.	1.53145e-121

>CP027433.1|AVL99672.1|999242_999881_-|TetR-family-transcriptional-regulator
MEVGDVNRRPGRPRTADLAERKQRLLDAACAELIENGYPDFTVGAVARRAGTSKTTVYSWFGDRDGLLRTMVERKYAGNIAFLEHSLHTRDDVRTMLIGFGTSALGSLLTELSLAISRAAMNDPGLGALVLAGGADRGRPLLAAYLRAATERGLLHVPDADAAAKALWGLVVQDDLSCALLGDDPLDEPAITARAEFAADAFLRIYGPDRGD
>CP027433.1|AVM02015.1|998269_999121_+|alpha/beta-hydrolase
MRPYPVRDLPSGQYLELPGRGTTYVTDSGPREAPVVFLLHSVATTGLLCWYPVIPELNREFRVITIDHRWHGRGIRSADFSLEACADDAVATADLLGIDHFTAAGFSMGGGIAQLAWRRHADRVDGLVLCSTGPYFSSLDPEELARDVRMGSIAARFDRFLPVPSDERLDDWSRHPAKWGISQFLSTPMSKMGAFSEAMSNFDSREWLSEIDVPTAVVISTKDKTVPPERQSILEEHITDALAFPVDGGHACCVLGAERFIPAFGDAVRSVLARRRAPAVLLP
>CP027433.1|AVL99671.1|997246_998146_+|copper-resistance-protein
MTRERARPLIAAVGGVLAGLAVCAVLAGAAGPAHSAWPSGLALAAACLLLGLGSLEVLRAQPSPAVIAGAAGFWAASSLIAGWLQAAERAGVPPFRLSVSALRPVLESGFGLAVCVAGALVVLAWSYRPFAPATAVAAVAAIGIVAVSTTGHAAAGLWTPLLVGVHALAAAWWLGALAALAVSVRGRGGWSRSLPLYSRYALLAAALVVATGIPVAIGEIGVGAQWFTTGYGRVALAKTVAFAVLVALGAAQRRTWVPAAARHGSSEQVSLRRAVAEVALLSAVAGLAAGLAGTAPGVS
>CP027433.1|AVM02014.1|996756_997239_+|copper-resistance-protein-CopC
MAAALVFAGTAAAHSAPTGSSPENGQTVDRSPGVVSVSFNENLRPEFAYLTVVGPDRHFYQQGDPTVEGNTVSVPVNALGPAGDYEINFRVTSADGHPVQGQRIFTLSVAGDGEPGPLAGPEESTASDDGFPAWAVVLIVVAVLLVLTGAVIVLLRRRSA
>CP027433.1|AVL99670.1|994626_996645_-|NAD(+)-synthase
MSVYSHGFARISAAVPLLALADPRVNAQRTVELIRQAADDGAALVAFPELGMCGYSVDDLVQQDALLDAVMEAVGDVAEATAGLRPLVAIGAPLRVDDGLFNCAVLIQDGQILGVTPKSYLPNYREFYEQRYFAAARDAVVDTVVLGGREVPFGADLIFEAADLPGFRVHAEICEDGWVPIPPSTVASLAGATVLVNLSGSPVTIGKESYREALVTGHSARCVAAQVYVASGFGESTTDLAWDGDALIAENGTLLQRSEAFAMRPQLITADVDLDRLRTERARMISLRDQVGDYAEQARGFRRIGFTLGDLDQPTGGLRRTVPRFPFVPSDDAVRERRCREVMHIQVQGLAQRLRAIGLERIVIGVSGGLDSTLALLVAVETFDRMGLPRSGIHAYTMPGFATGDATLARSHVLMDSLGVSGNELDIRPSCLQMLADLGHRFADGEPVYDVTFENVQAGERTSHLFRLANQLGGIVLGTGDLSELALGWCTYGVGDQMSHYNVNGSVPKSLIQHQIRWMITAGSYREDTTGALREILDDVISPELVPASEDGQVQSTEDAVGPYELHDFFLYYLTRFGYRPSKIAYLAEQAWTDKNTGVWPSMMSDDERHAYDPATIRGWLEVFLTRFMANQFKRTAMPNGPKIGSGGSLSPRGDWRAPSDAPSTAWLDALD
>CP027433.1|AVM02013.1|993266_994355_+|hypothetical-protein
MPEPTMKDHAWAGFDRIVAEAAPDGEHTNPWRRTAEGALDYRPDYPTLCSLLGVPLALGAKTQSGVPALAIDVWLSYELRRAGFDSDATWPRATMPRVLPAAVANLLAALPQKERSLVEARLRRKSVPGVTASSANILGKNYTKQVDVVMSDWATGPELLISTKRMDSSYGKNAANRVEESYGDAKNLRLRHPLAALGFVFGLRSDILVKEPDTADWLIDLLGKLGREDDAYHATCLLMLDYDDGLITGPDGLDEDADPFIQAGPADEESSGEAEDDDAMAEPTIPGIWEQVAGPADAAPGAPASSTTLPTATLPTVTLRHDAVPPELDPARFLKSMVERILDTTPVNRHVHARRRRRDAPV
>CP027433.1|AVL99669.1|991582_993274_+|SAM-dependent-methyltransferase
MIVTGEGPVPASADDTAPRRKARGAFFTPPEVADFMTAWAVRDGADRVLEPSAGDAEFMVAAARRLRALGPEGRAPEVHGVEIHPPSAGEAVRRVRAVGGEPVLTVGDFFAVEPSAGYDAVIGNPPYIRFQDFAGEPRARARRAALRAGVALSGLASSWAAFTVHAMQFLRPGGRLALVLPGELMSVNYAAPVRRHLFQSFSSVELVLFDEQLFPDAETEVVLVLADGYGAGPADHAVVRPVRDAAALADSASGRRWRPADPAGKWTGGLVDPYALEALTAAAGAGDFAELSQWGETTLGMVTGNNRFFTMPPERAAALGFAARELLTVSPPGSAHLRGLELTESGLSALGEAGKSTRLFAPGARPSAAAKRYIDTGEALGVDTAYKCRVRSPWYRVPLLDPADLLLTCMNADTPRLTTNAAGARHLNSVHGVYLREEVRDLGRRLLPLASLNSVTLLHAELVGRSYGGGILKMEPREADGWLQPAPATIEARADALTAVRSRVAATLAARDLAGAVALVDEVLFGGGRAGESAPLDVSGLAAVRRARAELATRRAERGRRRA
>CP027433.1|AVL99668.1|989994_991512_+|wax-ester/triacylglycerol-synthase-family-O-acyltransferase
MERLSGLDASFLYLETSSQVMNVAAILQVDPTTIPGGYSFEKLRAEMARRVKGMPVLRRKIADSLTNVDHPVWQEDADFDIERHVHRIAIPSPGRIDEVAQMCSHLVGQVLDRKKPLWDLWVMEGMEGGRIALMLRMHHASVDGATVADILGQLATATPDPPPLDPDLVAISAGAAPRAEMAVGGALNFFMQRPIAALKLIPKTLPVPVEWVKRVRSGDGMPAPFLAPRTRFNAPLTPRRAIALTQLPLADVKRVKNHYGVKMNDVVLAMTGGALRDYLVVRDELPEGPLVGMVPVSVRGSDETDLIVTGTNKVTGMFTRLPTPVEDPVERIRVAGIYANQAKAHHHDVEPNLLRAFAEFAPGNTLGAFMRLYADRRLSVLHPPIFNAVISNVAGPAFDMYFLGAKVEAVYPLAPIFHGLGLNITVFSSGDKLNVGLLTCADLTPDIWDLCHAFEAQLAELIAAVERDESAAQVGEAMDAVIREAVENAEIDEIAVELHGDDAES
>CP027433.1|AVL99667.1|989347_989863_-|polyketide-cyclase
MRTRFSSAELDEAFAGFQRTVAEVAVSRDWDRWADQFTPDASYLEHAYGVFEGREQIRAWVTRTMAAFPGSHMTGYPALWHVCDEATGRVICEVDNPMRDPGDGSVHTATNITILTYAGDGLWSREEDVYNPMEFGAMAYAWCERATACGTLDEPAQRWMSTYGRAFAPRA
>CP027433.1|AVL99666.1|988141_989134_-|acyl-ACP-desaturase
MARVLTQLELLQELEPAAEKEVNRHLKVARDWNPHDYVPWDEGRDYAELGGDDYDPEQSQLSEVAKAAMITNLLTEDNLPSYHRVIADNFSMDSAWGHWVGRWTAEENRHGIVMRDYLVVTRGVDPVALEEARMIHMTNGYDPMLAAAGRTDELEEYADELGILHSVAYVTFQELATRVSHRNTGKACGDPIADKMLQRIAADENLHMMFYRNICGAGLDLAPDQTLRAVTDIVTNFQMPGAGMPNFRRHGVLMAKHGIYDLRQHLDEVVMPVLKKWNIFDRNDFSAEGEKTREELAAFLEQLDKDAARFEEMRDRALAREAAKAAKQAS
>CP027433.1|AVL99673.1|1003337_1004651_+|hypothetical-protein
MTARLGRGILVLGMILGFLVVAVGVAPARADVLTDGAAAIDAYAAQPEHAEALGAPRGQVRAVRPGGAARTFTGGTVYYSPETGAHAVLGAIAARYRAVGGPAAVGFPTSDEQPAGAGRVSRFGDPGGAAIYWSPDTRASLLTGGVLRAWLASGAQDGPFGFPVSDTVNTGRADESRFAGPEGTMITWSSTAGLETVPAELADRLPAMAAAAAETTTPTLVAEDTSGSDSDEPWWRRQWAWIVAVVCVAVLLLFVAVLIVRARRRRRSGAAHTAAATQEERAPQPANRPAAKKPTKPKKPKKSTRSAAPEGPAGTPVQQAGLVSGPPVDAGAEPPPESAPEPESAPEPESTPEPEPELEPLLSDETRQASALVITYDSADTAVKVAYENNALGADRAGDDDVTHAWLHGTGAGADRDEGEAADAEQIDEPETPSGDE
>CP027433.1|AVM02016.1|1004658_1005822_+|alcohol-dehydrogenase
MRAAVCREGEFGVREIARPEPGPRQVLLRVLRAGICGSDLHARVHCDETADLISEAGYDDFMRTDQDVVLGHEFVGEVVSYGPDCRKRWKPGTRVVSLPIRRTDGEVQLTGLSALAPGAFAEFVLADESVTMPVPEQLPTDLAALTEPLAVGLHAVERSDIGRGEVAVVVGCGPIGLAVILMLKARGVRTVVASDYSPARRALAKTCGAQIVVDPAHDDLVEAIPARGNHFHTGPALLGFALDSMRQLQSIPGLPWWKLMGVGERLGQVPKGPVVFECVGVPGMIDRLATTMPYRSRIVVAGVCMEPDTIRPALVSNKEIDLRFVFGYDPDEFRETLHLLADRKIDARPLLTGTVGLDGVAAAFEALGDPETHAKILVDPASDALTP
>CP027433.1|AVL99674.1|1005948_1006503_+|hypothetical-protein
MTTLNALPLLAAGTWTIDPVHSSVGFSVRHLMVSKVRGEFTDFSGAIVVAEDGTPSVSAEIAVDSIDTRNDQRDAHIRSADFFDAEKFPQATFVSTSVDADGDDYVVHGDFTLKGVTRPVDLKLEFNGVNPGMGQGPVAGFEASTVLNRKDFGIDIEMPLETGGTVVGDKITITLEIEAVQSGA
>CP027433.1|AVL99675.1|1006592_1008335_+|adenylate/guanylate-cyclase-domain-containing-protein
MELQRPRESLHRLADCVDDRWRVRRWIISVLDEARHADAGDGELLAAEWQAISPKLKRRIIRRAAGVGIALGFGSKFLIGLETFVLVLLAFNGGQLTLRTEASHPSFWEMLVALVIGTAVALLFSLLLLRPQVRWFVDDGTTDRARRRAVARVPMQQVGADLAGWAVSFGVYALIAEVSPLFLATVGGAFAFAAVTSCCLTYLFAEAAARPLTVLALSGASEPSVVHGVRERMVVVWLVSSAVPMAGLITINFGRWMDWLPPGNAELDWSAVFLALISLTSGLTVVMLVGRAIADPLTEMREVVESASEGDFGRRVAVYDVSELGVLQSGLNNMLDGLAERERIRALFSKHVGDRVAELAISQGGEMVGTNADVGVIFVDLTGSTTFAAQRDPRETAVVLNVFFSVVAEVVERHDGLINKFEGDAALIVFGAPATLADPAGAALCAARELGEALSEKVPLEWGMGVGYGRVFAGNIGAASRYEYTVIGDPVNESARLSDWAKDCGSPVCASGDAVAAADPEEAQLWSSTGSVQLRGRTATTEVFVPSTLAARTEPPTLGSVLAELVKLPARRARREQERR
>CP027433.1|AVL99676.1|1008331_1009213_+|short-chain-dehydrogenase
MSGWSISDIPDQRGRRIVITGANSGLGEQMALILGRAGADVVLACRNLDKARAVADEIGPRATVASLDLADLASVRAFAEGFSGADVLINNAGVMAVPLRRTADGFEMQIGTNFLGHFALTGLLLDRIDDRVVTLSSLMHKNARLDVDDLNWHRRKYNRWTAYSDSKLADLMFALELAERLAEADSPKESLAAHPGYAATELQLHTESPLDWVMKLGNLTPIAQSAEDGALPALFAATSPHAVNGEYYGPKSLGGMRGAPAVAGYRRAASDREVRAKLWAEAELLTGVTFSAL
>CP027433.1|AVL99677.1|1009226_1009868_-|alpha-ketoglutarate-dependent-dioxygenase-AlkB
MTYAGIQESLFDAAVGEAGEPVVQPLGSGIRRRRLEHGAWVDLRPGWLTGATPLFERLTATVPWRAERRRMYDVTLPVPRLTAHYPDGHRLPDPLLTRLRDELSAHYARELPEGFVSAGLCLYRDGRDSVAWHGDRIGRGARQDTMVAIVSLGAPRQLSLRPRGGGESLRFTMSGGDLLVMGGSCQRTWDHAVPKVPASGPRLSIQFRPPGVL
>CP027433.1|AVL99678.1|1009930_1011118_-|putative-succinyldiaminopimelate-transaminase-DapC
MVEISPPLDQRRHLVRRLQPFAETVFAEMSALAVATDAVNLGQGFPDTDGPAAMLAAARQAIADGRNQYPPGIGIPELRQAISEQHARDYGLHYDPDTEVLVTVGATEAIAGAILGLVEPGREVVMIEPYYDSYAATVALAGAVRRTVPLVHDGDGFRLDLDALRKAFGPDTAAVLVNTPHNPTGTVLTDAELAEIARLAVEHDVPVIADEVYEHLTFRGLRHRPIATFDGMRERTLRISSAAKTFNVTGWKVGWVCGPPGLVAAARGAKQYLSYVGSGPFQPAVALALRTETEWVAAMAGDLEGKQQRLSAALRDAGFGVRRTDGTYFVLADPRPLGYDDGAALCRELPGRIGVAAVPVSAFTDSPREWNHLVRFAFSKRDEVIDEAARRLATL
>CP027433.1|AVL99679.1|1011125_1012772_-|helicase
MTDGPLIVQSDKTVLLEIDHPQAGAARAAIAPFAELERAPEHVHTYRVTPLALWNARAAGHDAEQVVDALVTYSRYPVPQPLLVDVVDTMGRFGRLQLVKNPAHGLSLVSLDRAVLEEVLRNKKVAPMLGARLDDDTVVVHPSERGRLKQALLKIGWPAEDLAGYVDGEAHAIALEQDDWELRDYQQLAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAQATTLILVTNTVAGRQWKRELIARTSLTEDEIGEYSGERKEIRPVTIATYQVMTRKSKGEYRNLDLFDSRDWGLIIYDEVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPADCIEVRVTMSDDERLQYAVAEADAKYKLCSTAHSKLRVVRSILEQHRGQQTLVIGAYIDQLEELGAALDAPVIQGSTRNAEREKLFDAFRRGEISTLVVSKVANFSIDLPEASVAVQVSGTFGSRQEEAQRLGRLLRPKADGGQAHFYSVVSRDSLDADYAAHRQRFLAEQGYAYRIVDAGDLPMVD
>CP027433.1|AVL99680.1|1012818_1015215_-|hypothetical-protein
MPAAEPFGKLAIRLPVQASRICRVTPDRPLRGLAETLADRSDEQLTRLLAARPDLASPPPRGSAILAHRALSASSLSLAGDDLDLAGVAVLEAFLDAGDGNSRHDLIGPVTREDVVARLGRRLKRAEVDARLSEFEARGLIWDSGAGTGKKTAWVAGIHLSAALPWRGHQLLGPLATAAPDEIRALLDGLDERPRELLATLAAGPPLGRSRDAAPDADPAAPVPRLLAAGLLLRIDEQTVELTPMAGQLLRGEPALETASLAAPALSAGSGRFSAGDVDAAGAGEALELLRHAAELLDVLGRTPAATLKSGGLGVRELRRLAKATGLTVTRVGLLVEVLAAHRLVDAGLPDPEPADWNGEEAFAPTAAVDAWLHTTPERRWYSLAAAWLDVPRRPWQIGDTDRDGNTLAALSSDLFDASAPLTRRQVLAPLLDVPPAAPVEVDALAATLAWRHPRQLRRWTRRFVGETLREARELGMVAHGCLTGPARLLLQSGPDDEADAAAVLAAMNRALPVPVDHFLVQADLTLMVPGPMTPDLAEQVTAIADLESGGAASVYRISEDSLRRALDTGRSGSEIVALLESRSRTPVPQSLTYLVEDVARRHGSLRVGVASSFVRCEDPALLAAVLSSDAAAEVSLRALASTVAVSPAALREVVEALRRHGFAPAGEDSTGTLVDLRSRGSRVPVRAATVRPRSRRARIAPGQLETVVSRLRAADRAEEAPRGQVRVSGGGESASALIQLALRTGRPVRLGYVDAHGAASRHVVRPRALHAGHLLGATDADPDARFSLHRITNLELL
>CP027433.1|AVL99681.1|1015221_1015413_+|hypothetical-protein
MWLVAKKNVYRDNGWPDIDVEDHAVTEFTSHLAGALSPFGNETTFPVPASELPFIQPHTVVNR

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Crispr_ID: CP027433_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027433_4

1041844-1042031

Orphan

Consensus_repeat	Method
GCTCCTTGAGCTTGTCGAAAGGTC	CRISPRCasFinder

3 spacers

The CRISPR arrays of CP027433_4

>merge|CP027433|4|1041844-1042031|CRISPRCasFinder
GCCCCTTGAGCTCGTCGAAAGGCCCTTGAGTTCTCGTAAGCCCCTTGAGTTCTCGTAAGCCCCTTGAGCTCGTCGAAAGGTGACCAGCGTGGTGGCGTCCTTCGCCCCCTCGAGGCGGTCCCTTCGCTCCTTGAGCTTGTCGAAAGGTCTTGAACTCGTCGAAAGGCCCTTGAGCTCGTCGAAAGCCC

>CP027433|4|3|1041844-1042031|CRISPRCasFinder
GCCCCTTGAGCTCGTCGAAAGGCC	CTTGAGTTCTCGTAAGCCCCTTGAGTTCTCGTAA
GCCCCTTGAGCTCGTCGAAAGGTG	ACCAGCGTGGTGGCGTCCTTCGCCCCCTCGAGGCGGTCCCTTC
GCTCCTTGAGCTTGTCGAAAGGTC	TTGAACTCGTCGAAA
GGCCCTTGAGCTCGTCGAAAGCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP027433.1\|AVL99708.1\|1047008_1048457_-\|FAD-linked-oxidoreductase	unknown	unknown	gnl\|CDD\|130740
CP027433.1\|AVM02021.1\|1033668_1034337_+\|pyridoxamine-5'-phosphate-oxidase	unknown	unknown	gnl\|CDD\|235555
CP027433.1\|AVL99707.1\|1045997_1046912_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380141
CP027433.1\|AVL99710.1\|1049627_1050851_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293841
CP027433.1\|AVL99703.1\|1043235_1044126_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213236
CP027433.1\|AVL99695.1\|1034356_1035652_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
CP027433.1\|AVL99702.1\|1042049_1043234_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224582
CP027433.1\|AVL99698.1\|1037973_1038336_-\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVL99699.1\|1038412_1039273_-\|allophanate-hydrolase	unknown	unknown	gnl\|CDD\|376868
CP027433.1\|AVM02022.1\|1041384_1041750_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|223619
CP027433.1\|AVM02023.1\|1050847_1053388_+\|magnesium-transporting-ATPase	unknown	unknown	gnl\|CDD\|319795
CP027433.1\|AVL99705.1\|1044769_1045039_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|224393
CP027433.1\|AVL99709.1\|1048318_1049569_-\|alanine-racemase	unknown	unknown	gnl\|CDD\|143488
CP027433.1\|AVL99696.1\|1035809_1036760_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380141
CP027433.1\|AVL99701.1\|1040077_1041388_+\|citrate-(Si)-synthase	unknown	unknown	gnl\|CDD\|180164
CP027433.1\|AVL99704.1\|1044185_1044749_-\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVL99700.1\|1039260_1039926_-\|allophanate-hydrolase	unknown	unknown	gnl\|CDD\|367142
CP027433.1\|AVL99706.1\|1045125_1045857_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|236115
CP027433.1\|AVL99694.1\|1032242_1033526_-\|Na+/H+-antiporter-NhaA	unknown	unknown	gnl\|CDD\|184855
CP027433.1\|AVL99697.1\|1036868_1037909_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226188

Protein	Function_ID	Function_description	E-value
CP027433.1\|AVL99708.1\|1047008_1048457_-\|FAD-linked-oxidoreductase	gnl\|CDD\|130740	TIGR01679, bact_FAD_ox, FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae.	6.62804e-108
CP027433.1\|AVM02021.1\|1033668_1034337_+\|pyridoxamine-5'-phosphate-oxidase	gnl\|CDD\|235555	PRK05679, PRK05679, pyridoxal 5'-phosphate synthase.	1.53183e-96
CP027433.1\|AVL99707.1\|1045997_1046912_+\|hypothetical-protein	gnl\|CDD\|380141	pfam18741, MTES_1575, REase_MTES_1575. Vsr REase Fold. Fused to HEPN (SWT1/Abi2 family), along with Transglutaminase and wHTH.	7.96682e-09
CP027433.1\|AVL99710.1\|1049627_1050851_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293841	cd16283, RomA-like_MBL-fold, Enterobacter cloacae RomA and related proteins; MBL-fold metallo hydrolase domain. Derepression of the romA-ramA locus results in a multidrug-resistance phenotype. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	1.00504e-56
CP027433.1\|AVL99703.1\|1043235_1044126_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213236	cd03269, ABC_putative_ATPase, ATP-binding cassette domain of an uncharacterized transporter. This subgroup is related to the subfamily A transporters involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two integral membranes. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	4.37945e-104
CP027433.1\|AVL99695.1\|1034356_1035652_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.6317e-54
CP027433.1\|AVL99702.1\|1042049_1043234_-\|ABC-transporter-permease	gnl\|CDD\|224582	COG1668, NatB, ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism].	2.14432e-31
CP027433.1\|AVL99699.1\|1038412_1039273_-\|allophanate-hydrolase	gnl\|CDD\|376868	pfam02626, CT_A_B, Carboxyltransferase domain, subdomain A and B. Urea carboxylase (UC) catalyzes a two-step, ATP- and biotin-dependent carboxylation reaction of urea. It is composed of biotin carboxylase (BC), carboxyltransferase (CT), and biotin carboxyl carrier protein (BCCP) domains. The CT domain of UC consists of four subdomains, named A, B, C and D. This domain covers the A and B subdomains of the CT domain. This domain covers the whole length of KipA (kinase A) from Bacillus subtilis. It can also be found in S. cerevisiae urea amidolyase Dur1,2, which is a multifunctional biotin-dependent enzyme with domains for urea carboxylase and allophanate (urea carboxylate) hydrolase activity.	1.05082e-84
CP027433.1\|AVM02022.1\|1041384_1041750_+\|peptidylprolyl-isomerase	gnl\|CDD\|223619	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones].	1.20299e-38
CP027433.1\|AVM02023.1\|1050847_1053388_+\|magnesium-transporting-ATPase	gnl\|CDD\|319795	cd02609, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporter, similar to uncharacterized Streptococcus pneumoniae exported protein 7, Exp7. This subfamily contains P-type ATPase transporters of unknown function, similar to Streptococcus pneumoniae Exp7. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids. They are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle. A general characteristic of P-type ATPases is a bundle of transmembrane helices which make up the transport path, and three domains on the cytoplasmic side of the membrane. Members include pumps that transport various light metal ions, such as H(+), Na(+), K(+), Ca(2+), and Mg(2+), pumps that transport indispensable trace elements, such as Zn(2+) and Cu(2+), pumps that remove toxic heavy metal ions, such as Cd(2+), and pumps such as aminophospholipid translocases which transport phosphatidylserine and phosphatidylethanolamine.	0
CP027433.1\|AVL99705.1\|1044769_1045039_-\|transcriptional-regulator	gnl\|CDD\|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	7.92476e-22
CP027433.1\|AVL99709.1\|1048318_1049569_-\|alanine-racemase	gnl\|CDD\|143488	cd06813, PLPDE_III_DSD_D-TA_like_2, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes Similar to D-Serine Dehydratase and D-Threonine Aldolase, Unknown Group 2. This subfamily is composed of uncharacterized bacterial proteins with similarity to eukaryotic D-serine dehydratases (DSD) and D-threonine aldolases (D-TA). DSD catalyzes the dehydration of D-serine to aminoacrylate, which is rapidly hydrolyzed to pyruvate and ammonia. D-TA reversibly catalyzes the aldol cleavage of D-threonine into glycine and acetaldehyde, and the synthesis of D-threonine from glycine and acetaldehyde. DSD and D-TA are fold type III PLP-dependent enzymes, similar to bacterial alanine racemase (AR), which contains an N-terminal PLP-binding TIM barrel domain and a C-terminal beta-sandwich domain. AR exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Based on their similarity to AR, it is possible members of this family also form dimers in solution.	1.36125e-172
CP027433.1\|AVL99696.1\|1035809_1036760_+\|hypothetical-protein	gnl\|CDD\|380141	pfam18741, MTES_1575, REase_MTES_1575. Vsr REase Fold. Fused to HEPN (SWT1/Abi2 family), along with Transglutaminase and wHTH.	1.54674e-08
CP027433.1\|AVL99701.1\|1040077_1041388_+\|citrate-(Si)-synthase	gnl\|CDD\|180164	PRK05614, gltA, citrate synthase.	0
CP027433.1\|AVL99697.1\|1036868_1037909_-\|hypothetical-protein	gnl\|CDD\|226188	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown].	1.35753e-84
CP027433.1\|AVL99706.1\|1045125_1045857_+\|enoyl-CoA-hydratase	gnl\|CDD\|236115	PRK07854, PRK07854, enoyl-CoA hydratase; Provisional.	8.53888e-101
CP027433.1\|AVL99694.1\|1032242_1033526_-\|Na+/H+-antiporter-NhaA	gnl\|CDD\|184855	PRK14853, nhaA, pH-dependent sodium/proton antiporter; Provisional.	2.82304e-170
CP027433.1\|AVL99700.1\|1039260_1039926_-\|allophanate-hydrolase	gnl\|CDD\|367142	pfam02682, CT_C_D, Carboxyltransferase domain, subdomain C and D. Urea carboxylase (UC) catalyzes a two-step, ATP- and biotin-dependent carboxylation reaction of urea. It is composed of biotin carboxylase (BC), carboxyltransferase (CT), and biotin carboxyl carrier protein (BCCP) domains. The CT domain of UC consists of four subdomains, named A, B, C and D. This domain covers the C and D subdomains of the CT domain. This domain covers the whole length of kipI (kinase A inhibitor) from Bacillus subtilis. It can also be found in S. cerevisiae urea amidolyase Dur1,2, which is a multifunctional biotin-dependent enzyme with domains for urea carboxylase and allophanate (urea carboxylate) hydrolase activity.	4.3859e-57

>CP027433.1|AVM02022.1|1041384_1041750_+|peptidylprolyl-isomerase
MTMSAKPEVEFPEGPAPTELQITDLIIGDGAEAVPGGMVDVHYVGVEYDTGEEFDSSWDRGQSANFPLGALIQGWQEGIPGMKVGGRRRLVVPPELAYGPAGGGHRLSGKTLIFVIDLLGA
>CP027433.1|AVL99701.1|1040077_1041388_+|citrate-(Si)-synthase
MSAENSTTDQPTGTFTYPGGSIDLPILKATDGSDSVALGPFLSKTGLTTFDGGFVNTAATKSEITYIDGDAGILRYRGIPIDQLAAKSTFIEVSYLLIYGELPSPTELEIFTDKIRRHTLLHEDLKRFFDGFPRNAHPMPVVSSAANALSAYYPDSLDPKDEDQVELSTIRLLAKLPTIAAYAYKKSVGQPFLYPDNAYGLVENFLRMTFGFPAEPYEVNPEIAKALDMLFILHADHEQNCSTSTVRLVGSSQANLFTSVSAGINALWGPLHGGANQAVLEMLEGIRDSGGDTAAFMSKVKNKEDGVKLMGFGHRVYKNYDPRAAIVKETADKILASLGVQDELLDIAKGLEEVALNDDYFIERKLYPNVDFYTGVIYRAMGFPTRMFTVLFALGRLPGWIAHWREMHADPATKIGRPRQLYTGYTERDYIPMEDR
>CP027433.1|AVL99700.1|1039260_1039926_-|allophanate-hydrolase
MRELPAGDDAVLLDFSGEADPAAAAAHAARALRAAAEAGILDIAEAVPTAFTVLVETSPGRGIDRLGVRRALRSARIGDVAPADVESGEIVVPVTYDGEDLDAVAERAGTSREAVIAAHRAVRWRVQFMGFAPGFGYLVPGPGSPPDARSVFAALSRREQSRPAVPAGSVAAAAGYSAIYPRTSPGGWFLLGHTDIPVWNLKADPPALLSAGATVRFTCAD
>CP027433.1|AVL99699.1|1038412_1039273_-|allophanate-hydrolase
MRGLTVVSPGPLATFQDLGRPGYAHLGVPRSGAADLGALRQANRLVGNPESAVAIETTLGGWSARTRGALVMAVTGPPTQVLVDGRGVGSHATFAVRDGALIEVLAPTRGCRNYVAARGGFRAPSTLGSAATDTLSGLGPAPLQRSDELHIGEAALQWPHATVAPGPPPPSREHELVVRRGPRYGDLADPAALSRTRFTVHPASNRIGVRLDPVDGVLEHRAGLGPQPSEGVPLGAVQIPPSGQPALFLADHPVTGGYPVAAVLTAESVDRAAQLIAGDVVRLRLR
>CP027433.1|AVL99698.1|1037973_1038336_-|hypothetical-protein
MTQPPLHPPQPFAQPDAGVRASFRLLLVAWLVNVAALVTEITAAALFLSALSAELDHRDGSSSLSIATTVAVAALVLAVGGVVLTATTVVRYRKNRPVAVPVLAAFTAVPAFPCCTRSAW
>CP027433.1|AVL99697.1|1036868_1037909_-|hypothetical-protein
MTQVVLQPHGADSASPVTADAGPADTNPHEMLGSDSVTWRFFGGWHGMLMGLWSGSMQNMHPKLAAGVWDHSDFFGERWERLMRSLYPISGVVFDLDPATGRQVRDYHLTIKGTMNDGGRYHALDPDVFYWAHATFWYGNIRCAEAFGPPITEADKRALFEESRTWYAMYGVSMRPCPDTYEEFLEYWDHMCRHVLRDHEAVRTVLDITQLPPPPWMRAWMPLWLWQRQIIVIQRMFTWITTGLYDEPVREMLGLNWTARDDRRFRRFGTAVATAMRLLPARYRRHPRARDAYDRVSGRVPADAPRLETPARNLPKGDEQEKPIHYCPVHAQRRAQLPWQSNDVGD
>CP027433.1|AVL99696.1|1035809_1036760_+|hypothetical-protein
MSNDDDDRPEAARARPNAPKLRSILASQEGVVTLVQTRACGLHRSAVARKCASGEWERIGPSVYRATDHRLTVRARIRAAVWSAGPRAVLSGPAAAFWRGMSTDPPTTIHVTVPRHRGSRKTFATSLGPVTLWYRDLDPVDRTTVRNLATTSAALTVLDTVALQGIEFLDRVLQSKAVDLPMLIAADARYPRRRGAQAVSAMLDHAAAGARSAAERRALAVMLDDADLPPFELNYPAVGSYEVDVAFVEQRIAVEIDGFAFHSDAHAFQRDRTRGNALSAAGWTVLHFTWADIVERPRETVAMIRWHLALAERRNA
>CP027433.1|AVL99695.1|1034356_1035652_+|MFS-transporter
MMRIFADTRPLANKYFARLWWANIVTVIGAQLTVVAVPAQIYSITGSSAYVGLTGLFGLVPLVVFGLWGGSLADVFDRRKILIVTTLGLIGTAVLFWVQAFFAWNNVWLLLGVFAVQQAFFAVNQPTRTAVLPRILDDELLPAANSLNMTVMQAGAIAGPLVGASMIPVLGYSLLYLFDAIFLLATLWAVLSLPSLVPDRGPDAPKPSTPGVRSVIDGLAYLRHHPVLLASFVVDLIAMIFGMPRALFPQMAHESFGGPSDGGFAFALLFIAIPLGAVLGGVFSGWVSRVEHQGRAVIIAIVIWGLSIVVAGSALFFADGAALPVLPIVVTALMIGGAADMASAAFRQTMLQAAATDDVRGRLQGVFIVVVAGGPRIADVAHGASAAMVGTAVTFAGGGVLTVVLTVVAAVAFPMFWRYRVTRRGEPVDPA
>CP027433.1|AVM02021.1|1033668_1034337_+|pyridoxamine-5'-phosphate-oxidase
MRVGYGAESTAGADGVAEHLDPAWLTGDPPWLGLFQRWLGEAVAAQIPEPNAMVLGTVDEFGHPGTRTVLCKGVDAAGIVFFTGYDSAKGRALSANPVASATFPWIALERQVHFRGRVVKVDPAETEAYWTARPRGSQLSARASRQSAPIASRAALEAAAELVAVEHGGADGDVPVPVPPHWGGYRIEPVRVEFWQGRADRLHNRAVAELDGTVWVTRRLQP
>CP027433.1|AVL99694.1|1032242_1033526_-|Na+/H+-antiporter-NhaA
MNRPDPLNHDEAPRSDAGERTVLGARPPAETWRILEILRKETVGGFLLVGAAILALIAANTPLRSLYEEVSSTVIGYAPWHLELSISHWAADGLLAIFFFLVGLELKREIVAGELRSPRTALVPVFAAVGGVVVPALIYYLINRGGPGVHGWAIPTATDIAFAVAVLAVVGSRLPAALRLFLLTLAVVDDLIAIVIIAVVYTSELEIAPLLLALIPLLIFGFLAHRYADWFARNGWAAWVVLLPLGIVCWALVHASGIHATIAGVLLGFAVPVHRGAFRRGDDGLAGQFEHRFRPLSAGFAVPVFAFFSAGVTVGGADSIASAVTDPIAIGVAAGLLLGKPIGIMGATWLTTRFTRSRLDPSVRWSDLFGVSMLAAIGFTVSLLVAELSFDDALALDHAKIAILTASTAAALLAGLVLYVVGRLRKS
>CP027433.1|AVL99702.1|1042049_1043234_-|ABC-transporter-permease
MRSSENIMIIAGREISTRAKERSFVISTVLMVAAIVVGAVVWSFFAGRESSDRIGVVGGDSALTQTLTRSGEIADSRVTVETVPDATAARQKVDDDDLDAVVLVGPDHRYTILSESGTGSTLDGVLRSGLAQYQLATSLAERGVAVTDLPSASIVTEQINPEEPDVGQRISIALIGSILLMMAVMTGGVMVAVGVVEEKTSRIVEILLSSVRPLQLLWGKILGIGAISLGQVVLLGATALVAGTATGLLTVTGTATAMFAAVIAWFLLGFLFFAALYAAVGAMVSRQEELNGASTPLTFLALGVLYAGMFGIQALDSTWMQVLSWIPPFSAVLMPIRIATGDTTALQVIGTFAVMIVVCAAAIWASSRIYSRSVLRTGTRTSWSEVAGMLTGRG
>CP027433.1|AVL99703.1|1043235_1044126_-|ABC-transporter-ATP-binding-protein
MPQALHVQHLQKNYGTLRALDDVSFSVGPGEIFGFVGSNGAGKSTTMRIILGVLSADAGEVRLGDAPIDFDRRRRIGYMPEERGLYPKMKVDRQLAYLARLHGMAKDEAEASARAWTQRLGIEARYDDNVADLSLGNQQRVQLAAALVHDPDVLVLDEPFSGLDPVAVDVMSDVLKDKAAQGVPILFSSHQLELVERLCDRVGIISAGRMTALGSVDELRSADGTVLEVTGPDPGSRWADGVPGVVHAEYSPESTRLRLEADADDQAVLAAALAHGPVHRFAATAPSLTDLFRELV
>CP027433.1|AVL99704.1|1044185_1044749_-|hypothetical-protein
MPDPNLAVPESNVPDWLLRYNDRRARKYEHRAEQLRSVLPGLRTRRTRRTLVVGLVLTLLLATCASVASFWFITATWIPFLVGIVGSIVFFTLLRILSGAFSDAPANALDELQLTQRNAARSLAFMLFVPLMLTVYAITIGLSFRDWIAGQTMAALAWLMISGTLAVACLPDILLSWWMSDDPDDEE
>CP027433.1|AVL99705.1|1044769_1045039_-|transcriptional-regulator
MSPVRQGEKQPIYNRLAVLRAERGLSRAQLAKLIEVNVQSVGALERGDYYPSLDLAFRICAVFELPVEAVFSRTPFTAMSTELYGKPSS
>CP027433.1|AVL99706.1|1045125_1045857_+|enoyl-CoA-hydratase
MIVSSTTGAVVTIELARPEKRNALNHQMVDDLSAAFTAAAEAGARAIVLTGRGDVFSAGADLSGPVYEKGFLDKLIALNAQIESTPVPVIAALNGAALGAGLQLSVAADLRVMAPSALAGIPAAKIGVAVDEWTIRRLVSLVGAGQAAGMLFGCEPLTADRAHDLGYANRIGDLTDAQHWAAQIAELAPLTLRHYKLVLNGDGARDEAPADRIAAMLAAWQSEDVQEARAARAERRAPVFQGR
>CP027433.1|AVL99707.1|1045997_1046912_+|hypothetical-protein
MGTADRTKLRRILAGQEGIITLRQTASCGLHRSAVARRCASGEWRTVGPGVFHATDHRLTIHARIRAAVWSAGRRAVLCGPAAAFWRGYTRTVPATIHVTVPRGRSARKPLSPTLGDVQLWHRNLHDDDRTEVRKVAITSPALTVLDAAALLGMTFLDRALQAKKVTVEDLVAADARYPGRRGARVVAPMLDAAAAGARSPAERRALAMLLGSADLPQWQLNYPAVEPYEVDVAFVAHKVAVEIDGMAYHSDAEAFQRDRARGNALTGAGWVVLHFTWADVVERPEQTLAIIRWHLALAERHSA
>CP027433.1|AVL99708.1|1047008_1048457_-|FAD-linked-oxidoreductase
MVPSHEVRGGLRARRARGADRAERLRRRRGRRRRPHLPRRREVLPVSAAATWSNWGRTATCRPERVITPQNVERLAAEIAAAAERGATVKPVGAGHSFSEIAVAPQTQVNLSGLRGLLDVDAAQRRVTLGAGTHLYQIPPLLDPHALAMANLGDVDRQTVSGATSTGTHGTGLAFGGISTQIVGAQLVDGTGQIHDFGDDDPELKAVALGLGALGVLTRLTLQCVDAFAIEAHEAPASADEAIDTFLDRCAAYDHYEFYWFPHTDCALTKRNTRLPADAPVSGPGKVRRYIDDELLSNGVYRALCAFSAAVPAVVPGINQVSGRVLSARTYTDRSDKVFVSSRTVRFREMEYAIPLAAVPEALRELRTTIERRGHKVSFPVEVRAAAADDLMLSTASGRESGYLAVHRYHRDSPAASEAYFRDVEDIMTAHGGRPHWGKMHTRDADYLRSVYPRFDDFLALRDRLDPQRTFANPYLRRVLGE
>CP027433.1|AVL99709.1|1048318_1049569_-|alanine-racemase
MSGTSTQYMNVPSEYWGGIDDAVAAAGLDAPVLALDLGALEHNIADLRRRSAGVPIRVASKSVRIRSVIEDVLSRDGYAGVLAYDVAEARWLATAAGVSDVLLGYPSMRAGAVAELLADETALARVTLLIDDVAQLDLVDAVAAPDTRGSVRVALDLDASLRALGGRLHLGVRRSPMHDVDQATRMARTIGDRPGFDLVGVMSYEAQVAGVGNGVPGRTLMNTMVRGMQALSMAELRHRRGRAIAAIREHADLEFVNAGGTGSLEATAKDSSVTDIAVGSGLLGGHLFDTYRHFQPAPALAFGLDVVRRPSPRYITCAGGGWIASGPPGEDRLPKPVWPEGLSYLPKESAGEVQTPLHVPESIHVRIGSRVWFRHTKSGEVCERAERVALIARNGSGDAEVVDVVPTYRGEGKCFL
>CP027433.1|AVL99710.1|1049627_1050851_+|MBL-fold-metallo-hydrolase
MTSIRNILLDGVIEPVGATVQRTRRASARLAAAGSARGEAALVGAVDLLAERGVGPARALGASREQIAERTAGSRFAVDGVFANREAAFAGRGPDASTLLEMARRPGQPSAPIPVLTPTFDDEPADLAVTWLGHASNLVEIDGVRVLTDPVFSARCSPSQTVGPKRMHAAPLTVGALPPIDVVLISHDHYDHLDTATVDALAAMHPQARFVAPIGVDAHLISWGIPPERIDVADWYERVTLDVRGTELRFHAVSARHFSGRGLVRNLTQWVSWAVVGPSHRFFFSGDTGFTERYAETGDLLGPFDLTLIAVGAYGDQWPDIHVNPEEALSIHHLLNPHAARDALLLPIHWGTFNLALHSWADPIQRLLTAAGTAGVPVVVPRPGGTADVGKRNGTAFDDPTWWEHCA
>CP027433.1|AVM02023.1|1050847_1053388_+|magnesium-transporting-ATPase
MSTPTDVRQEGLTAAEVAERIADGRVNAQPDKSGRSIGDIVRANVFTRINAILGVLFAIVAYTGSFINGLFALLIVANSGIGIIQEVRAKRTLDKLSIVGQARPTVRRDGVVQEVAPDQIVLDDLIELAPGDQVVVDGVTVTSEALDVDESLLTGEADAVDKAPGDQIMSGSFVVSGSGSYRATEVGADAYAAKLAAEASKFTLVDSELRNGINKILAVITVILIPAGILTIFNQLVISREELNDALLGMVAALVPMVPEGLVLMTSIAFAVGVVRLGQRQCLVNELPAIEGLARVDVVCTDKTGTLTENGMRLSEVRLLSDRFSEDELTRALAAIAASDPHPNASMQAIREAYPDSPGWTTSAILPFASANKFSGVSLVDAAGDSRGNWLIGAPDVLLDPESAEAKLASDLGATGLRILLVGATDVPVDTRPTAAVRSGAAGGNVPGTLTPAGLIVLEQRVRPDAGDTLRYFESQGVQVKVISGDNALSVGAVAESLGLGDATTSVDARKLAADGSPELVEQVDKGITFGRVRPDQKRAMVHALQSRGHTVAMTGDGVNDVLALKDADIGVAMGSGSSAARSVAQIVLLDNKFATLPYVVGEGRRVIGNIERVANLFLTKTVYAVLLALAVGVAGLIAHFAGAAPISYPFQPIHVTISAWFTIGIPAFVLSLAPNNERAKTGFVRRVLTKAVPNGLIVGTATFVCFLLVNPGGPGASLGGGAGHLNGAQIQAATATLATMIAIAWWVLVVVARPMNWWKVVLVGVSFLAYVLIFLWPFTADLFELDVWNGRNMTIAAICAAAGILCVEVSSRILGARLDRRAAAEQAALLGEPVPVEPAQAATGA

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Crispr_ID: CP027433_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027433_5

1417604-1425553

Unclear

Consensus_repeat	Method
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	PILER-CR
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CRISPRCasFinder
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CRT

108 spacers

cas2,cas1,csb3,cas3,csb2gr5,cas7

The CRISPR arrays of CP027433_5

>merge|CP027433|5|1417604-1425553|PILER-CR,CRISPRCasFinder,CRT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGACCCGACGATCTAGAAGCTGGCACCCTGGCGTGGGGCAAGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCACCAGCCGACATAGCGCGCTTCACAAGGCGCACCGTAAGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCCCACGTCTCCCCCACCACAGGTTTTTCGCTAAAGGGAGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGACGCCATCAGATCGGAGACGTCCTCCCACGAGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTCCTCGTACTTGCGTTTCCGCTCGGCCTGCAACTTCTCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGCGCTGGAAAGTCCGCAGCGTGACGCCCTCCTCGAAGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGTCGGTGCAGCCGGCGATCTCGCATGCCTTCTGCGGCCCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGATGATTGGCACGTCTCGCCGCAGTACGTACGTCAGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCTTCCGGAGGAGCCGTACACCATCAGGTTGAGGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGAGGTGCCGCGCAGGGTGGCGACCAGCCGGCCCGTATCCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGACAGGCCGGAAGGAGTCATCCGCGGCACGCTCCGCCTCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGCGCGAAGTTGTCGTGCGCTGTGAGGTGGATGTTCTGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGACGGAAATGCCCACCCGTAGGCGCAGACGGCATATAGCGGGCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGACGGAAATGCCCACCCGTAGGCGCAGACGGCATATAGCGGGCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGATGACGGGGCGTTCACGCTTAGGCGCTTTCGCCTGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGGCACCACACAGCTATCGCACGCCCCGACTCAGCCGTGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCAGGCCGCTAGTGGTGCGCTAGTGTGGGTATTACCAAGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGAAGCTCTGCCAATGTCTCCGCAGTAAGCGGCATACGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCCTCCCCTGCACTGAACCGGATCGGCTCAGTGCCGCCCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGACGACGAGGACTCGTGCGGCCTGCTCCTCGGAGACGAGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCTGTCGGACGCCCGCGACGACGAGACCGGTGCCCGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGTAAGCGGCGTACGGTATCCGCTGATCGAGTAATCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCTGGGCTACGCGATATGCCTGGCAAGCGGTCCCCTACTTGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCCTCCAACGCCCGCCGAGTCTCATCATGGACCAGCCCGCCTCAACTAAGGTCGACGACCGAAGTCGTCGACGGACCCGCGATGAGCACGGCACGGTGATCATGGAGACCTTGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCGCCGAATTGCTTGGCGTGCCGCACAGTGAAATTGCCGAGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCCGCACCTCATGGTGGGCGTATCCGTGCTCACCCTCCAGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTACTACGTAAGTAATGACCTTGCGTACGACGTTATGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGCGTAGTCTTCCAAGAATCGGGCGACCGGTACCTCATGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGCGAATGTGGGGAGCGGGCCGATGAACGAGTTCGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGACCTACGGCGATGACGTTCTAGGAATGGACCTTACCGGAGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTTGACCAGTCCTGGTGTCAGGTCGGGATACTTTTGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCGGCCTGAGATTGTCCTGAAAGCACGTGAGACTCAATGACGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCACCCACACCTACCGACTCACCCCCGGCGAGTACGGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCCTGTACACCACGGGGCCGAGACTATGAACCCCGCCCCTGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTCACGACGTCATCGGACGGCGAGACGGTGTGGTTCCCGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGAGCAGTTCGCGGCGTCGGTTGAGTTTGGAGGGTTCACGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCTGGAAGCCGAGGCGGGTGAGACCCGATGAGCATTCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGGTAGGCTACCGGCCGCCGGAGCTTCGCGGACAGGAGCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGACCACCCCGTCCGCGTCATCCCCCTCGCGTGTTTCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCGCTATCGGAGTGCTCACGGTTACCCCGCGAGGTGAGAGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTCGAATGCGTCCGGGCAGATGGGCGGCGTTTTTCTGCTGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTCAGCGCTATCGTAGACGCGTACGATCAGTGGGCGGGGGAGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTGAGCCGCATGGGACGGCTGTATGACGACACGTTCATGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCGCTCACGCCACCGATTCCGGAGCCGAGTCATCCGGTCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCGGATGGCTCACCGACGACGGCCACATCTGCCCCGTCTGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGGGTGTTGAAGCCGGGCGGCCATATGGCCGTGTTCGCCGGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGGCTTCCGTAATTGATCTGACGACCGCTCCATATCAAGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCACCCAGCGCGCCGCAATCTGGGCTGACACCGGTCTCGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCCTTGTCAACGATCTAATCGGGATCATTGAGACGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTTCCGTCGGCGGCGCTAGCAGGTTCTTCCCGGTGTTCAAGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCGGGTGCGGCCCCGAGAAGCGTCTCGCGATCAGCGGATGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGACACTCTGCCTTCGCCCTCGACGAGCTCGATGTCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGCTCCAAACGCTCCGGCTCCATACCGGCCTGTTGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTGGATGCTGCTGCGACGTCGGCGGGTGACGCGGCGGCGGCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCACGCTGGAACTGGAGCGGGAGCTGCGCACCGTGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCCCAACGCATTCAGCGCCGCCGGGTCAAGGGATGGCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCGCCCTCGGTGTTGCCTGGCGGTGTTGCCTACAGCCGATTGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGGCGTCGCCAGGGGCCTCAGCACGCTCTCGGCTTTCAGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGCGGGGCGATCTCCGATGAGCGTGCGTGTCGACCGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCCGGCGAGCCGTTCGCGCTCGTCTCCGGCCTCGCCGTCCCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCGGGCCGGTCGACCCGACCCTGCGGTGGCCGCACCCGATGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCCACACCGACACGGTCACCGACCGCCGGGATCGCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGAGAGCGCCGCGCAAGGGGGAGGCCCCAGTGCGAGCGCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCAGCGCGTTCATCGCCAAGGATGGAGCGTTGTTGTAGGCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGAGGCATGGCCGACAGTGCGGTGCGTAGTTTCCGTGTGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGTGCGCACCGAGGCGCAGGAGTCCCTGCCCCCGAACGAGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGACCACCACCCTTGACGTGCGTTACGCCGAACCGCTCGAAGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGAGCGACATCACTGAACTGGTCGCGATCACCCTAGCCGTGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGTGTGCTTGCTGCGGCCTGCGCTGTCGATGGTCCAGGTGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTCCCGCATCGCCTTCACGATCTGGCGGGCCGCCGACGTGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGGGGCGTTCGACAGGTCCCGGTCGTTGGAGCTGTACTGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCCTCCGGCTCGGCCCCGCGGCCGATGAAGAATGCGGCGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGATCGGCTGGGCCGGGAACGAGGACGTGTCGACCTCGGGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCCCAATCCGTCTTCGGGGTGAGCTTGATCTGCTTGTCCAGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCTCAAGCACCTCGACCAGGACCGGTTGACGAAGGCCGCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTCTGCGAAAGAAGCTCACCCTCGGGGCAGGCTATCTCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTTCGCCGCCGAAACAGCAGTACCCGCCGCCGACACCGCCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCAGACACGGTGCGAGCAGGTTGCACCGCACTATCAGCCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCAGTATGAATCTGCCCTGGCCAACGGGTGTGACATCTGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTGCTGGATCCATGCGGAGACGGCATGCTCGGTGATCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGATCTGCGTCGTCGTCGCCGAGAGACCGACCCGCGCACTGCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTTTAAGGGTGGTAAGCAGCAATCCCTGGATGGTCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCGGATTGACTGGAACGTCGCCGCGTTCAAGGCGATCAGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGATGTACGCCACCGAGCACGTCGCCCAGTTGCCCGTCTGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTAGTGCCGGTAATGAAGATCCTCGAAGACTCGTTCTCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCACGGCCACATGAGTCCGCAGGCCACGCACTGGGTCTGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGATCAGCCACGGCTCGCCATTCGTCACGCCGAAGCGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCCTTGCCGAGGTCTGGTTCGTCGGCGAGCGACGAGTGGACGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTCGCGTGATCAGCGGCAGCGAGCACTGTTGGGGGGCCTGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTCCGGGTACGCCGGTGACACCCGAGACGCAATCGCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTTGTGGCGACCGGTGCATGGCGATTCGGTGTCGGCGGCCAGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGTGCGTCGAAGAACGACAACGGGAACTACATCGAGGAGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGTGCCGTCCTCGTTGTCCTCGATCTCGGGTTCAACGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGGGTCAACATCCGTTCGTGGTGTCGGGGTTCGCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCCTCGACCAGACGGAGGCTCGCTCGGTCACTTCCCCTGAGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCTGCTGACCTGCCTGATCTCGGGCGGATCCCAGAGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGATCCCGTGCCGCCTGCGCCTGAGCCACCACCGCCGGGTCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTTGCCTCGCTTCAATTCTGGTGGCGAGTTGGACGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGCCGCCGGAACCCGCCTGTCCAGGACGCGCTCCAGCAGTCGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTTCGGTGCTGGTCATACTGCGTTCTCTCTCAGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGCTTGCTGGCGAGGTGCCCGAGGTCGGCGGCGATGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGTCTAGCTTGGCTTGCAGCTGCTCGACGTGCCGGGCCGTGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGCTTTCCGTGCTTGGTGATGATGGTCCGCTCCCCCTTGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGCCCGCGATCCCCGTCGTCATCACCGGCTTGGCGCTGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGCCCGTACGTCGTCTATCTGGACGGTGACCTCACGGGGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGAGGCGTGCACCTTGACCGGCCAACGCTCGGATGATGTGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGGGCGAGGTACCCCCAGGGATTGTGCATGCGGTGAAAGGCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG

>CP027433|5|1|1417604-1425553|PILER-CR
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GACCCGACGATCTAGAAGCTGGCACCCTGGCGTGGGGCAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CACCAGCCGACATAGCGCGCTTCACAAGGCGCACCGTAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCCACGTCTCCCCCACCACAGGTTTTTCGCTAAAGGGAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GACGCCATCAGATCGGAGACGTCCTCCCACGAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCCTCGTACTTGCGTTTCCGCTCGGCCTGCAACTTCTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGCTGGAAAGTCCGCAGCGTGACGCCCTCCTCGAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTCGGTGCAGCCGGCGATCTCGCATGCCTTCTGCGGCCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATGATTGGCACGTCTCGCCGCAGTACGTACGTCAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTTCCGGAGGAGCCGTACACCATCAGGTTGAGG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GAGGTGCCGCGCAGGGTGGCGACCAGCCGGCCCGTATCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACAGGCCGGAAGGAGTCATCCGCGGCACGCTCCGCCTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGCGAAGTTGTCGTGCGCTGTGAGGTGGATGTTCTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACGGAAATGCCCACCCGTAGGCGCAGACGGCATATAGCGGGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACGGAAATGCCCACCCGTAGGCGCAGACGGCATATAGCGGGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATGACGGGGCGTTCACGCTTAGGCGCTTTCGCCTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGCACCACACAGCTATCGCACGCCCCGACTCAGCCGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CAGGCCGCTAGTGGTGCGCTAGTGTGGGTATTACCAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	AAGCTCTGCCAATGTCTCCGCAGTAAGCGGCATACG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTCCCCTGCACTGAACCGGATCGGCTCAGTGCCGCCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACGACGAGGACTCGTGCGGCCTGCTCCTCGGAGACGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTGTCGGACGCCCGCGACGACGAGACCGGTGCCCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTAAGCGGCGTACGGTATCCGCTGATCGAGTAATC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTGGGCTACGCGATATGCCTGGCAAGCGGTCCCCTACTT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTCCAACGCCCGCCGAGTCTCATCATGGACCAGCCC
GCCTCAACTAAGGTCGACGACCGAAGTCGTCGACGG	ACCCGCGATGAGCACGGCACGGTGATCATGGAGACCTT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGCCGAATTGCTTGGCGTGCCGCACAGTGAAATTGCCGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCGCACCTCATGGTGGGCGTATCCGTGCTCACCCTCCAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TACTACGTAAGTAATGACCTTGCGTACGACGTTAT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGTAGTCTTCCAAGAATCGGGCGACCGGTACCTCATG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGAATGTGGGGAGCGGGCCGATGAACGAGTTCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACCTACGGCGATGACGTTCTAGGAATGGACCTTACCGGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTGACCAGTCCTGGTGTCAGGTCGGGATACTTTTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGGCCTGAGATTGTCCTGAAAGCACGTGAGACTCAATGAC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CACCCACACCTACCGACTCACCCCCGGCGAGTACGG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTGTACACCACGGGGCCGAGACTATGAACCCCGCCCCT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCACGACGTCATCGGACGGCGAGACGGTGTGGTTCCCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GAGCAGTTCGCGGCGTCGGTTGAGTTTGGAGGGTTCAC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTGGAAGCCGAGGCGGGTGAGACCCGATGAGCATTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGTAGGCTACCGGCCGCCGGAGCTTCGCGGACAGGAGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACCACCCCGTCCGCGTCATCCCCCTCGCGTGTTTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGCTATCGGAGTGCTCACGGTTACCCCGCGAGGTGAGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCGAATGCGTCCGGGCAGATGGGCGGCGTTTTTCTGCT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCAGCGCTATCGTAGACGCGTACGATCAGTGGGCGGGGGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TGAGCCGCATGGGACGGCTGTATGACGACACGTTCAT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGCTCACGCCACCGATTCCGGAGCCGAGTCATCCGGTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGGATGGCTCACCGACGACGGCCACATCTGCCCCGTCTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGGTGTTGAAGCCGGGCGGCCATATGGCCGTGTTCGCCGG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGCTTCCGTAATTGATCTGACGACCGCTCCATATCAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CACCCAGCGCGCCGCAATCTGGGCTGACACCGGTCTCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTTGTCAACGATCTAATCGGGATCATTGAGAC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTCCGTCGGCGGCGCTAGCAGGTTCTTCCCGGTGTTCAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGGGTGCGGCCCCGAGAAGCGTCTCGCGATCAGCGGAT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACACTCTGCCTTCGCCCTCGACGAGCTCGATGTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCTCCAAACGCTCCGGCTCCATACCGGCCTGTTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TGGATGCTGCTGCGACGTCGGCGGGTGACGCGGCGGCGGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CACGCTGGAACTGGAGCGGGAGCTGCGCACCGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCCAACGCATTCAGCGCCGCCGGGTCAAGGGATGGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGCCCTCGGTGTTGCCTGGCGGTGTTGCCTACAGCCGATT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGCGTCGCCAGGGGCCTCAGCACGCTCTCGGCTTTCAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGGGGCGATCTCCGATGAGCGTGCGTGTCGACCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCGGCGAGCCGTTCGCGCTCGTCTCCGGCCTCGCCGTCCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGGGCCGGTCGACCCGACCCTGCGGTGGCCGCACCCGAT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCACACCGACACGGTCACCGACCGCCGGGATCGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	AGAGCGCCGCGCAAGGGGGAGGCCCCAGTGCGAGCGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CAGCGCGTTCATCGCCAAGGATGGAGCGTTGTTGTAGGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	AGGCATGGCCGACAGTGCGGTGCGTAGTTTCCGTGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTGCGCACCGAGGCGCAGGAGTCCCTGCCCCCGAACGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACCACCACCCTTGACGTGCGTTACGCCGAACCGCTCGAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	AGCGACATCACTGAACTGGTCGCGATCACCCTAGCCGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTGTGCTTGCTGCGGCCTGCGCTGTCGATGGTCCAGGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCCCGCATCGCCTTCACGATCTGGCGGGCCGCCGACGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGGGCGTTCGACAGGTCCCGGTCGTTGGAGCTGTACTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTCCGGCTCGGCCCCGCGGCCGATGAAGAATGCGGCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATCGGCTGGGCCGGGAACGAGGACGTGTCGACCTCGGG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCCAATCCGTCTTCGGGGTGAGCTTGATCTGCTTGTCCAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTCAAGCACCTCGACCAGGACCGGTTGACGAAGGCCGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCTGCGAAAGAAGCTCACCCTCGGGGCAGGCTATCTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTCGCCGCCGAAACAGCAGTACCCGCCGCCGACACCGCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CAGACACGGTGCGAGCAGGTTGCACCGCACTATCAGCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CAGTATGAATCTGCCCTGGCCAACGGGTGTGACATCT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TGCTGGATCCATGCGGAGACGGCATGCTCGGTGATC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATCTGCGTCGTCGTCGCCGAGAGACCGACCCGCGCACTGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTTAAGGGTGGTAAGCAGCAATCCCTGGATGGTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGGATTGACTGGAACGTCGCCGCGTTCAAGGCGATCAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATGTACGCCACCGAGCACGTCGCCCAGTTGCCCGTCTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TAGTGCCGGTAATGAAGATCCTCGAAGACTCGTTCTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CACGGCCACATGAGTCCGCAGGCCACGCACTGGGTCTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GATCAGCCACGGCTCGCCATTCGTCACGCCGAAGCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTTGCCGAGGTCTGGTTCGTCGGCGAGCGACGAGTGGAC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCGCGTGATCAGCGGCAGCGAGCACTGTTGGGGGGCCT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCCGGGTACGCCGGTGACACCCGAGACGCAATCGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTGTGGCGACCGGTGCATGGCGATTCGGTGTCGGCGGCCA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTGCGTCGAAGAACGACAACGGGAACTACATCGAGGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTGCCGTCCTCGTTGTCCTCGATCTCGGGTTCAAC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGGTCAACATCCGTTCGTGGTGTCGGGGTTCGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTCGACCAGACGGAGGCTCGCTCGGTCACTTCCCCTGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTGCTGACCTGCCTGATCTCGGGCGGATCCCAGAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATCCCGTGCCGCCTGCGCCTGAGCCACCACCGCCGGGTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTGCCTCGCTTCAATTCTGGTGGCGAGTTGGACG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCCGCCGGAACCCGCCTGTCCAGGACGCGCTCCAGCAGTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTCGGTGCTGGTCATACTGCGTTCTCTCTCA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTTGCTGGCGAGGTGCCCGAGGTCGGCGGCGAT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCTAGCTTGGCTTGCAGCTGCTCGACGTGCCGGGCCGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCTTTCCGTGCTTGGTGATGATGGTCCGCTCCCCCTT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCCCGCGATCCCCGTCGTCATCACCGGCTTGGCGCT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCCCGTACGTCGTCTATCTGGACGGTGACCTCACGGGG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	AGGCGTGCACCTTGACCGGCCAACGCTCGGATGATGTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGAGGTACCCCCAGGGATTGTGCATGCGGTGAAAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG

>CP027433|5|4|1417604-1425553|CRISPRCasFinder
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GACCCGACGATCTAGAAGCTGGCACCCTGGCGTGGGGCAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CACCAGCCGACATAGCGCGCTTCACAAGGCGCACCGTAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCCACGTCTCCCCCACCACAGGTTTTTCGCTAAAGGGAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GACGCCATCAGATCGGAGACGTCCTCCCACGAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCCTCGTACTTGCGTTTCCGCTCGGCCTGCAACTTCTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGCTGGAAAGTCCGCAGCGTGACGCCCTCCTCGAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTCGGTGCAGCCGGCGATCTCGCATGCCTTCTGCGGCCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATGATTGGCACGTCTCGCCGCAGTACGTACGTCAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTTCCGGAGGAGCCGTACACCATCAGGTTGAGG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GAGGTGCCGCGCAGGGTGGCGACCAGCCGGCCCGTATCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACAGGCCGGAAGGAGTCATCCGCGGCACGCTCCGCCTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGCGAAGTTGTCGTGCGCTGTGAGGTGGATGTTCTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACGGAAATGCCCACCCGTAGGCGCAGACGGCATATAGCGGGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACGGAAATGCCCACCCGTAGGCGCAGACGGCATATAGCGGGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATGACGGGGCGTTCACGCTTAGGCGCTTTCGCCTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGCACCACACAGCTATCGCACGCCCCGACTCAGCCGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CAGGCCGCTAGTGGTGCGCTAGTGTGGGTATTACCAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	AAGCTCTGCCAATGTCTCCGCAGTAAGCGGCATACG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTCCCCTGCACTGAACCGGATCGGCTCAGTGCCGCCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACGACGAGGACTCGTGCGGCCTGCTCCTCGGAGACGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTGTCGGACGCCCGCGACGACGAGACCGGTGCCCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTAAGCGGCGTACGGTATCCGCTGATCGAGTAATC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTGGGCTACGCGATATGCCTGGCAAGCGGTCCCCTACTT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTCCAACGCCCGCCGAGTCTCATCATGGACCAGCCC
GCCTCAACTAAGGTCGACGACCGAAGTCGTCGACGG	ACCCGCGATGAGCACGGCACGGTGATCATGGAGACCTT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGCCGAATTGCTTGGCGTGCCGCACAGTGAAATTGCCGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCGCACCTCATGGTGGGCGTATCCGTGCTCACCCTCCAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TACTACGTAAGTAATGACCTTGCGTACGACGTTAT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGTAGTCTTCCAAGAATCGGGCGACCGGTACCTCATG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGAATGTGGGGAGCGGGCCGATGAACGAGTTCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACCTACGGCGATGACGTTCTAGGAATGGACCTTACCGGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTGACCAGTCCTGGTGTCAGGTCGGGATACTTTTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGGCCTGAGATTGTCCTGAAAGCACGTGAGACTCAATGAC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CACCCACACCTACCGACTCACCCCCGGCGAGTACGG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTGTACACCACGGGGCCGAGACTATGAACCCCGCCCCT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCACGACGTCATCGGACGGCGAGACGGTGTGGTTCCCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GAGCAGTTCGCGGCGTCGGTTGAGTTTGGAGGGTTCAC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTGGAAGCCGAGGCGGGTGAGACCCGATGAGCATTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGTAGGCTACCGGCCGCCGGAGCTTCGCGGACAGGAGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACCACCCCGTCCGCGTCATCCCCCTCGCGTGTTTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGCTATCGGAGTGCTCACGGTTACCCCGCGAGGTGAGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCGAATGCGTCCGGGCAGATGGGCGGCGTTTTTCTGCT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCAGCGCTATCGTAGACGCGTACGATCAGTGGGCGGGGGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TGAGCCGCATGGGACGGCTGTATGACGACACGTTCAT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGCTCACGCCACCGATTCCGGAGCCGAGTCATCCGGTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGGATGGCTCACCGACGACGGCCACATCTGCCCCGTCTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGGTGTTGAAGCCGGGCGGCCATATGGCCGTGTTCGCCGG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGCTTCCGTAATTGATCTGACGACCGCTCCATATCAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CACCCAGCGCGCCGCAATCTGGGCTGACACCGGTCTCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTTGTCAACGATCTAATCGGGATCATTGAGAC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTCCGTCGGCGGCGCTAGCAGGTTCTTCCCGGTGTTCAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGGGTGCGGCCCCGAGAAGCGTCTCGCGATCAGCGGAT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACACTCTGCCTTCGCCCTCGACGAGCTCGATGTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCTCCAAACGCTCCGGCTCCATACCGGCCTGTTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TGGATGCTGCTGCGACGTCGGCGGGTGACGCGGCGGCGGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CACGCTGGAACTGGAGCGGGAGCTGCGCACCGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCCAACGCATTCAGCGCCGCCGGGTCAAGGGATGGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGCCCTCGGTGTTGCCTGGCGGTGTTGCCTACAGCCGATT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGCGTCGCCAGGGGCCTCAGCACGCTCTCGGCTTTCAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGGGGCGATCTCCGATGAGCGTGCGTGTCGACCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCGGCGAGCCGTTCGCGCTCGTCTCCGGCCTCGCCGTCCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGGGCCGGTCGACCCGACCCTGCGGTGGCCGCACCCGAT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCACACCGACACGGTCACCGACCGCCGGGATCGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	AGAGCGCCGCGCAAGGGGGAGGCCCCAGTGCGAGCGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CAGCGCGTTCATCGCCAAGGATGGAGCGTTGTTGTAGGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	AGGCATGGCCGACAGTGCGGTGCGTAGTTTCCGTGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTGCGCACCGAGGCGCAGGAGTCCCTGCCCCCGAACGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACCACCACCCTTGACGTGCGTTACGCCGAACCGCTCGAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	AGCGACATCACTGAACTGGTCGCGATCACCCTAGCCGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTGTGCTTGCTGCGGCCTGCGCTGTCGATGGTCCAGGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCCCGCATCGCCTTCACGATCTGGCGGGCCGCCGACGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGGGCGTTCGACAGGTCCCGGTCGTTGGAGCTGTACTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTCCGGCTCGGCCCCGCGGCCGATGAAGAATGCGGCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATCGGCTGGGCCGGGAACGAGGACGTGTCGACCTCGGG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCCAATCCGTCTTCGGGGTGAGCTTGATCTGCTTGTCCAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTCAAGCACCTCGACCAGGACCGGTTGACGAAGGCCGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCTGCGAAAGAAGCTCACCCTCGGGGCAGGCTATCTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTCGCCGCCGAAACAGCAGTACCCGCCGCCGACACCGCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CAGACACGGTGCGAGCAGGTTGCACCGCACTATCAGCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CAGTATGAATCTGCCCTGGCCAACGGGTGTGACATCT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TGCTGGATCCATGCGGAGACGGCATGCTCGGTGATC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATCTGCGTCGTCGTCGCCGAGAGACCGACCCGCGCACTGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTTAAGGGTGGTAAGCAGCAATCCCTGGATGGTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGGATTGACTGGAACGTCGCCGCGTTCAAGGCGATCAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATGTACGCCACCGAGCACGTCGCCCAGTTGCCCGTCTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TAGTGCCGGTAATGAAGATCCTCGAAGACTCGTTCTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CACGGCCACATGAGTCCGCAGGCCACGCACTGGGTCTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GATCAGCCACGGCTCGCCATTCGTCACGCCGAAGCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTTGCCGAGGTCTGGTTCGTCGGCGAGCGACGAGTGGAC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCGCGTGATCAGCGGCAGCGAGCACTGTTGGGGGGCCT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCCGGGTACGCCGGTGACACCCGAGACGCAATCGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTGTGGCGACCGGTGCATGGCGATTCGGTGTCGGCGGCCA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTGCGTCGAAGAACGACAACGGGAACTACATCGAGGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTGCCGTCCTCGTTGTCCTCGATCTCGGGTTCAAC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGGTCAACATCCGTTCGTGGTGTCGGGGTTCGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTCGACCAGACGGAGGCTCGCTCGGTCACTTCCCCTGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTGCTGACCTGCCTGATCTCGGGCGGATCCCAGAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATCCCGTGCCGCCTGCGCCTGAGCCACCACCGCCGGGTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTGCCTCGCTTCAATTCTGGTGGCGAGTTGGACG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCCGCCGGAACCCGCCTGTCCAGGACGCGCTCCAGCAGTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTCGGTGCTGGTCATACTGCGTTCTCTCTCA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTTGCTGGCGAGGTGCCCGAGGTCGGCGGCGAT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCTAGCTTGGCTTGCAGCTGCTCGACGTGCCGGGCCGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCTTTCCGTGCTTGGTGATGATGGTCCGCTCCCCCTT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCCCGCGATCCCCGTCGTCATCACCGGCTTGGCGCT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCCCGTACGTCGTCTATCTGGACGGTGACCTCACGGGG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	AGGCGTGCACCTTGACCGGCCAACGCTCGGATGATGTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGAGGTACCCCCAGGGATTGTGCATGCGGTGAAAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG

>CP027433|5|2|1417604-1425553|CRT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GACCCGACGATCTAGAAGCTGGCACCCTGGCGTGGGGCAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CACCAGCCGACATAGCGCGCTTCACAAGGCGCACCGTAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCCACGTCTCCCCCACCACAGGTTTTTCGCTAAAGGGAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GACGCCATCAGATCGGAGACGTCCTCCCACGAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCCTCGTACTTGCGTTTCCGCTCGGCCTGCAACTTCTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGCTGGAAAGTCCGCAGCGTGACGCCCTCCTCGAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTCGGTGCAGCCGGCGATCTCGCATGCCTTCTGCGGCCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATGATTGGCACGTCTCGCCGCAGTACGTACGTCAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTTCCGGAGGAGCCGTACACCATCAGGTTGAGG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GAGGTGCCGCGCAGGGTGGCGACCAGCCGGCCCGTATCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACAGGCCGGAAGGAGTCATCCGCGGCACGCTCCGCCTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGCGAAGTTGTCGTGCGCTGTGAGGTGGATGTTCTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACGGAAATGCCCACCCGTAGGCGCAGACGGCATATAGCGGGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACGGAAATGCCCACCCGTAGGCGCAGACGGCATATAGCGGGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATGACGGGGCGTTCACGCTTAGGCGCTTTCGCCTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGCACCACACAGCTATCGCACGCCCCGACTCAGCCGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CAGGCCGCTAGTGGTGCGCTAGTGTGGGTATTACCAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	AAGCTCTGCCAATGTCTCCGCAGTAAGCGGCATACG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTCCCCTGCACTGAACCGGATCGGCTCAGTGCCGCCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACGACGAGGACTCGTGCGGCCTGCTCCTCGGAGACGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTGTCGGACGCCCGCGACGACGAGACCGGTGCCCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTAAGCGGCGTACGGTATCCGCTGATCGAGTAATC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTGGGCTACGCGATATGCCTGGCAAGCGGTCCCCTACTT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTCCAACGCCCGCCGAGTCTCATCATGGACCAGCCC
GCCTCAACTAAGGTCGACGACCGAAGTCGTCGACGG	ACCCGCGATGAGCACGGCACGGTGATCATGGAGACCTT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGCCGAATTGCTTGGCGTGCCGCACAGTGAAATTGCCGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCGCACCTCATGGTGGGCGTATCCGTGCTCACCCTCCAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TACTACGTAAGTAATGACCTTGCGTACGACGTTAT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGTAGTCTTCCAAGAATCGGGCGACCGGTACCTCATG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGAATGTGGGGAGCGGGCCGATGAACGAGTTCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACCTACGGCGATGACGTTCTAGGAATGGACCTTACCGGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTGACCAGTCCTGGTGTCAGGTCGGGATACTTTTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGGCCTGAGATTGTCCTGAAAGCACGTGAGACTCAATGAC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CACCCACACCTACCGACTCACCCCCGGCGAGTACGG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTGTACACCACGGGGCCGAGACTATGAACCCCGCCCCT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCACGACGTCATCGGACGGCGAGACGGTGTGGTTCCCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GAGCAGTTCGCGGCGTCGGTTGAGTTTGGAGGGTTCAC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTGGAAGCCGAGGCGGGTGAGACCCGATGAGCATTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGTAGGCTACCGGCCGCCGGAGCTTCGCGGACAGGAGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACCACCCCGTCCGCGTCATCCCCCTCGCGTGTTTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGCTATCGGAGTGCTCACGGTTACCCCGCGAGGTGAGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCGAATGCGTCCGGGCAGATGGGCGGCGTTTTTCTGCT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCAGCGCTATCGTAGACGCGTACGATCAGTGGGCGGGGGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TGAGCCGCATGGGACGGCTGTATGACGACACGTTCAT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGCTCACGCCACCGATTCCGGAGCCGAGTCATCCGGTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGGATGGCTCACCGACGACGGCCACATCTGCCCCGTCTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGGTGTTGAAGCCGGGCGGCCATATGGCCGTGTTCGCCGG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGCTTCCGTAATTGATCTGACGACCGCTCCATATCAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CACCCAGCGCGCCGCAATCTGGGCTGACACCGGTCTCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTTGTCAACGATCTAATCGGGATCATTGAGAC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTCCGTCGGCGGCGCTAGCAGGTTCTTCCCGGTGTTCAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGGGTGCGGCCCCGAGAAGCGTCTCGCGATCAGCGGAT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACACTCTGCCTTCGCCCTCGACGAGCTCGATGTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCTCCAAACGCTCCGGCTCCATACCGGCCTGTTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TGGATGCTGCTGCGACGTCGGCGGGTGACGCGGCGGCGGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CACGCTGGAACTGGAGCGGGAGCTGCGCACCGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCCAACGCATTCAGCGCCGCCGGGTCAAGGGATGGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGCCCTCGGTGTTGCCTGGCGGTGTTGCCTACAGCCGATT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGCGTCGCCAGGGGCCTCAGCACGCTCTCGGCTTTCAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGGGGCGATCTCCGATGAGCGTGCGTGTCGACCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCGGCGAGCCGTTCGCGCTCGTCTCCGGCCTCGCCGTCCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGGGCCGGTCGACCCGACCCTGCGGTGGCCGCACCCGAT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCACACCGACACGGTCACCGACCGCCGGGATCGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	AGAGCGCCGCGCAAGGGGGAGGCCCCAGTGCGAGCGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CAGCGCGTTCATCGCCAAGGATGGAGCGTTGTTGTAGGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	AGGCATGGCCGACAGTGCGGTGCGTAGTTTCCGTGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTGCGCACCGAGGCGCAGGAGTCCCTGCCCCCGAACGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ACCACCACCCTTGACGTGCGTTACGCCGAACCGCTCGAA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	AGCGACATCACTGAACTGGTCGCGATCACCCTAGCCGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTGTGCTTGCTGCGGCCTGCGCTGTCGATGGTCCAGGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCCCGCATCGCCTTCACGATCTGGCGGGCCGCCGACGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGGGCGTTCGACAGGTCCCGGTCGTTGGAGCTGTACTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTCCGGCTCGGCCCCGCGGCCGATGAAGAATGCGGCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATCGGCTGGGCCGGGAACGAGGACGTGTCGACCTCGGG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCCAATCCGTCTTCGGGGTGAGCTTGATCTGCTTGTCCAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTCAAGCACCTCGACCAGGACCGGTTGACGAAGGCCGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCTGCGAAAGAAGCTCACCCTCGGGGCAGGCTATCTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTCGCCGCCGAAACAGCAGTACCCGCCGCCGACACCGCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CAGACACGGTGCGAGCAGGTTGCACCGCACTATCAGCC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CAGTATGAATCTGCCCTGGCCAACGGGTGTGACATCT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TGCTGGATCCATGCGGAGACGGCATGCTCGGTGATC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATCTGCGTCGTCGTCGCCGAGAGACCGACCCGCGCACTGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTTAAGGGTGGTAAGCAGCAATCCCTGGATGGTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CGGATTGACTGGAACGTCGCCGCGTTCAAGGCGATCAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATGTACGCCACCGAGCACGTCGCCCAGTTGCCCGTCTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TAGTGCCGGTAATGAAGATCCTCGAAGACTCGTTCTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CACGGCCACATGAGTCCGCAGGCCACGCACTGGGTCTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GATCAGCCACGGCTCGCCATTCGTCACGCCGAAGCG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTTGCCGAGGTCTGGTTCGTCGGCGAGCGACGAGTGGAC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCGCGTGATCAGCGGCAGCGAGCACTGTTGGGGGGCCT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCCGGGTACGCCGGTGACACCCGAGACGCAATCGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTGTGGCGACCGGTGCATGGCGATTCGGTGTCGGCGGCCA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTGCGTCGAAGAACGACAACGGGAACTACATCGAGGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GTGCCGTCCTCGTTGTCCTCGATCTCGGGTTCAAC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GGGTCAACATCCGTTCGTGGTGTCGGGGTTCGC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CCTCGACCAGACGGAGGCTCGCTCGGTCACTTCCCCTGA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTGCTGACCTGCCTGATCTCGGGCGGATCCCAGAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	ATCCCGTGCCGCCTGCGCCTGAGCCACCACCGCCGGGTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTGCCTCGCTTCAATTCTGGTGGCGAGTTGGACG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCCGCCGGAACCCGCCTGTCCAGGACGCGCTCCAGCAGTC
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TTCGGTGCTGGTCATACTGCGTTCTCTCTCA
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	CTTGCTGGCGAGGTGCCCGAGGTCGGCGGCGAT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	TCTAGCTTGGCTTGCAGCTGCTCGACGTGCCGGGCCGT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCTTTCCGTGCTTGGTGATGATGGTCCGCTCCCCCTT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCCCGCGATCCCCGTCGTCATCACCGGCTTGGCGCT
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCCCGTACGTCGTCTATCTGGACGGTGACCTCACGGGG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	AGGCGTGCACCTTGACCGGCCAACGCTCGGATGATGTG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG	GCGAGGTACCCCCAGGGATTGTGCATGCGGTGAAAG
GCCTCAACGAAGGTCGACGACCGAAGTCGTCGACGG

Protein	Signature genes	Signature genes Name	Protein_function
CP027433.1\|AVM00006.1\|1429440_1429902_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271319
CP027433.1\|AVL99999.1\|1414562_1415588_+\|CRISPR-associated-protein	csb3	cd09764_csb3_CAS-I-U	gnl\|CDD\|187733
CP027433.1\|AVL99996.1\|1409082_1410285_+\|type-I-U-CRISPR-associated-protein-Cas7	cas7	cd09738_cas7_CAS-I-U	gnl\|CDD\|378223
CP027433.1\|AVM00009.1\|1430765_1432349_+\|GMP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|234614
CP027433.1\|AVL99993.1\|1405467_1406865_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|367155
CP027433.1\|AVM00008.1\|1430277_1430502_-\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM00002.1\|1426051_1426294_+\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVL99994.1\|1407089_1407674_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225786
CP027433.1\|AVL99998.1\|1411845_1414566_+\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|274235
CP027433.1\|AVM00011.1\|1432858_1434193_-\|PspC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377200
CP027433.1\|AVM00005.1\|1428235_1429444_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227293
CP027433.1\|AVM00010.1\|1432652_1432862_-\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM00007.1\|1430002_1430224_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350322
CP027433.1\|AVM00001.1\|1417228_1417528_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
CP027433.1\|AVM00003.1\|1426290_1426671_+\|VapC-toxin-family-PIN-domain-ribonuclease	unknown	unknown	gnl\|CDD\|350221
CP027433.1\|AVL99995.1\|1407811_1408768_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379138
CP027433.1\|AVM02072.1\|1415621_1417232_+\|CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187766
CP027433.1\|AVM02071.1\|1404836_1405157_+\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|224278
CP027433.1\|AVL99997.1\|1410286_1411849_+\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
CP027433.1\|AVM00004.1\|1426722_1428219_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368446

Protein	Function_ID	Function_description	E-value
CP027433.1\|AVM00006.1\|1429440_1429902_+\|hypothetical-protein	gnl\|CDD\|271319	cd15457, NADAR, Escherichia coli swarming motility protein YbiA and related proteins. This family of uncharacterized domains was initially classified as Domain of Unknown Function (DUF1768). It contains members such as the E. coli swarming motility protein YbiA. Mutations in YbiA cause defects in Escherichia coli swarming, but not necessarily in motility. More recently, this family has been predicted to be involved in NAD-utilizing pathways, likely to act on ADP-ribose derivatives, and has been named the NADAR (NAD and ADP-ribose) superfamily.	6.43591e-33
CP027433.1\|AVL99999.1\|1414562_1415588_+\|CRISPR-associated-protein	gnl\|CDD\|187733	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Might be a catalytically active RNA endoribonuclease.	6.77663e-78
CP027433.1\|AVM00003.1\|1426290_1426671_+\|VapC-toxin-family-PIN-domain-ribonuclease	gnl\|CDD\|350221	cd09873, PIN_Pae0151-like, VapC-like PIN domain of the Pyrobaculum aerophilum Pae0151 and Pae2754 proteins and homologs. Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of the Pyrobaculum aerophilum proteins, Pae0151 and Pae2754, and homologs are included in this subfamily. They are similar to the PIN domains of the Mycobacterium tuberculosis VapC and Neisseria gonorrhoeae FitB toxins of the prokaryotic toxin/antitoxin operons, VapBC and FitAB, respectively, which are believed to be involved in growth inhibition by regulating translation. These toxins are nearly always co-expressed with an antitoxin, a cognate protein inhibitor, forming an inert protein complex. Disassociation of the protein complex activates the ribonuclease activity of the toxin by an, as yet undefined mechanism. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	3.09851e-23
CP027433.1\|AVL99996.1\|1409082_1410285_+\|type-I-U-CRISPR-associated-protein-Cas7	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	4.91417e-31
CP027433.1\|AVM00009.1\|1430765_1432349_+\|GMP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
CP027433.1\|AVL99993.1\|1405467_1406865_-\|HNH-endonuclease	gnl\|CDD\|367155	pfam02720, DUF222, Domain of unknown function (DUF222). This family is often found associated to the N-terminus of the HNH endonuclease domain pfam01844. The function of this domain is uncertain. This family has been called the 13E12 repeat family.	4.0426e-18
CP027433.1\|AVL99994.1\|1407089_1407674_-\|hypothetical-protein	gnl\|CDD\|225786	COG3247, HdeD, Uncharacterized conserved protein [Function unknown].	1.275e-18
CP027433.1\|AVL99998.1\|1411845_1414566_+\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	9.7271e-75
CP027433.1\|AVM00011.1\|1432858_1434193_-\|PspC-domain-containing-protein	gnl\|CDD\|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	1.57956e-18
CP027433.1\|AVM00005.1\|1428235_1429444_+\|hypothetical-protein	gnl\|CDD\|227293	COG4957, COG4957, Predicted transcriptional regulator [Transcription].	0.000161714
CP027433.1\|AVM00001.1\|1417228_1417528_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.03936e-19
CP027433.1\|AVM00004.1\|1426722_1428219_+\|hypothetical-protein	gnl\|CDD\|368446	pfam05443, ROS_MUCR, ROS/MUCR transcriptional regulator protein. This family consists of several ROS/MUCR transcriptional regulator proteins. The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti. This gene encodes a 15.5-kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid and is necessary for succinoglycan production. Sinorhizobium meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of alfalfa nodules. MucR from Sinorhizobium meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan.	4.95906e-06
CP027433.1\|AVL99995.1\|1407811_1408768_+\|hypothetical-protein	gnl\|CDD\|379138	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family. This family is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.43177e-05
CP027433.1\|AVM02072.1\|1415621_1417232_+\|CRISPR-associated-endonuclease-Cas4/Cas1	gnl\|CDD\|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.46437e-88
CP027433.1\|AVM02071.1\|1404836_1405157_+\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|224278	COG1359, COG1359, Uncharacterized conserved protein [Function unknown].	2.73112e-26
CP027433.1\|AVL99997.1\|1410286_1411849_+\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	7.40215e-55
CP027433.1\|AVM00007.1\|1430002_1430224_-\|hypothetical-protein	gnl\|CDD\|350322	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins. This subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC3 and VapC21 toxins. It belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is a PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	8.23113e-24

>CP027433.1|AVM00001.1|1417228_1417528_+|CRISPR-associated-endonuclease-Cas2
MTARLSRLLVAYDIVDDRRRTRLANILQSFGDRIQFSVFLVDVTDAQEVRMRAKVNAEIDGRVDSVLFCRLGPTATTGSTSITYLGCRRTTTDDTDFVV
>CP027433.1|AVM02072.1|1415621_1417232_+|CRISPR-associated-endonuclease-Cas4/Cas1
MDGGNRTELPISLVVHTVFCERRAWLEAVGERVDSAQIEAGLVAHARVDSPRVSPIESTSMDIDHSDLGIVGKCDVVRHLPGRVSIVEYKATPTRRVPEVTASNIVQLALQRLCLESGGVVIESQEVYFTNHRRSVSVDLTESDFDEARKWVDMTREIVDRQTAPPPLVDDPRCRFCSHVSVCLPDEHHRNELNHVRRVAVSNPGGEVLHLTTAGSRASLKSGRVVIQKAREEVASLPVERVVGLVVHGNVDVSSALIREMLWRGYGIVWCSSNGRVVGHARSARTPNGLPRLQQHVRSSVGDIFIAREMIAPKVANQATQLRRSSRADVIEIVRKMREISRNIDQAQSVSQIVGLEGEAAALYFREFGSCIANGADPLFVDGFDGRAGRRARDPLNAAFNYAYGLLAAECVRALHACGLDPHAGFVHSAVRNKPALALDLMEQFRPIIADSVVLSVINNGQLTTVDFHSLLGAMRLSTTGRKAITKEYERRVSQEFTHPVYKYKVSWRRAIEVQARMLLGVLDGTGHHYVGIRTR
>CP027433.1|AVL99999.1|1414562_1415588_+|CRISPR-associated-protein
MTEIVIGGSHTSALTHFASFGIIAILEEAGHRSLRLRWRDESNPAPTVSGPTVDMDVLAQSVVAHASRHAAPDSWVQARTFIQKGSKKSEIGLFSPRIAAPESLEAWAALFDQRRSVIDANSDFTWLDGQMLQALGEPGYWQAGEKDALPDQGASRWEMKTRNRGEDFTRNRLAPMAIELSGRDASAVASSLAGDIVQDSAGKLDSRTGTGLVPPQPVDDAVAWCALWGISAFRLYPRLDGVAVTPGAWPTNITHPRLMAVPMSTTPISLAKIRRIVRSKSFSDAVFGERTTDGAWSILLSAARYELRRSGLRGAVVFPIRKGGSSSAPERQVLTGVFEPF
>CP027433.1|AVL99998.1|1411845_1414566_+|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3
MSELSLDDFPAFFSEVNGFPPFQWQSRLCRYIVENGRWPDAINAPTGSGKSSVVDVHLFVNALDGVGVGPRVPRRLAVVVGRRAIVDSHYGHASETVLTSLRTAPPESITERVSAGLQALSTVADVAKPFQSSILRGGMPRDSNWIDDPAACAVICATPDMFGSRLLFGGYGSSRNAWPREAGALARDTVMVLDEAHLNEQLLISTRRVRDLQSADGIAIPAVQVVATTATPTAEEQEVVGVTPDDLLIDTVLRDRLQKPKPVQLVASEHWPGARRPSRNYAKQIAGLVRKQVAERDGDGTVGCIVNSVFTAREVARALGAELGPEAVILWVGPMRPLDLREQQERHPRAFTVDGDPDVRVIVATQTLEVGVDVDLAALVTELAPGSAIAQRAGRVNRLGRRDSGPCVVVVPEVAPTAGSGPYEQDELTESFEWLQRRADDPSGLAPVQIQIDSAPQGARCRAVLSRIELGDVQAFSSTSEEQIAAVDLDRWIRDDLSAEPAGVGLVRRGPLPIDDLDALALLRATPVSPDEVYPVGIGTAREVVDQVIRRAKAPYARVFLRRAGQLDVVDLSDDQIDIRPGDVLIVDASHPIVDNRLIVAKDGESSDATVWGPPESVEVYVDGHDPDWVVLRDLTSAVRDAIEDRPDGETEEQATQRAMDAFVEDLGEAGELRVSAARLKVTAPPLPEDAGQRLAWVVIADADPDRSDDESRQSWTGTAVLLSSHQEDVAARARELGNRLGLSSYLVDALERAGRFHDEGKRHSGFQEILGGDSNRVLAKSAGRDAGEPKRRRSRVNLARGWRHEQLSVVYASAELESDDPEFRDLVLRLIGSSHGRGRSGFVHSADEVLSGETPELMSVARGLFDEGGWEELMDLTERRWGTWECAYLEAILRAADCMVSKEGA
>CP027433.1|AVL99997.1|1410286_1411849_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MAVVGIRASFPLGVYRGHTAGERHDLLPSPLRLHSALVAAAGNGSSAVPKSGGLRRVESSERALQWLEDNPPEYVELPDWETGVSTDRPYAYMDEGVVENVNTDPSRRKSTRFVADSTALAGPIGWGWDSIPEEIASSLDELCADVPCLGETESPVVLEVREIEPTHRRSRSESPFASVAIRLSVPSAGRTDELDSLYERAQPARTPSVSGDKWKSTEKPLAPRITHDCAIHLGYDRLDDDPQDQEAPAPWEHLVHIAVDKHIEAPHRVQWAVAMHRALVAALGTEANSAVTGRYPEGARRPANRVAIQYVDETSMQLSSHAELGPGFALLVSDDALAEVAPIVDLVRRLYRGGVGEIRLGHRTLLEASTFWETPAEGARRLWCSAAVVPETRRQKAVEGRKWTLGDSALLSVGFVYRDRLGKPSQGPAGARYREIVDRVQATGAAVIQASPIPDSNVGRYAHKVPEGVVVQPYQLILAPGSLVDERGLVALGQSRHLGGGLLVPMDVEPAVADILGAGR
>CP027433.1|AVL99996.1|1409082_1410285_+|type-I-U-CRISPR-associated-protein-Cas7
MARLELDTLLAACRQGGAATLTSVTELAPAEGEHGGVAPARFVNRGGATYAFEKRYVDGVAVHVVLIDSKGSQLNRVEQEIAWAIADGVEPLASTPRVAVEYKEGHPTEYDYTLPHRLFDGHIRAGSIDGVPVTQNAAYVAARNATTADARPILELGPTALVFGGWDSTRKSRQGRYRSVLTGEIIGVLADQGATATEVPKRGGARVDPVAASVRLSGAQLKELLADQEAELSPKLIDKIQAEIKAAKSGTVSASTLGLGAIPPNLNGLGLVACSKIIRSHVVSFSALRQLRFGAGPAGDAACRALLAAYALAGLARADAALDLRANCNLREAGPTRVSIDGRHGTSIELEPLSIDDADGLLTAAIAEARRTAGIAWDGKVFTVVGNDIVVNHADADAED
>CP027433.1|AVL99995.1|1407811_1408768_+|hypothetical-protein
MSGIGAFEVAGGPGRDRRRYLAALFVVLLLVSMPACLVKVVHDGGSAAPAVRSLVAEAGERLDAVQAWAQARRARVSLVLVDRATGERVGLDENEQLLTASVAKLFIASRAAFLAATGERAVTVDDDALLGPMLSASDGVAATVLWGRLGGPALVGAVAHRFGLTSTAASPDGRWPHTRTTASDLAGFYAHLLGERDSWTDRILGHLEAWTDVGADGYDQRFGLAAVLGRAELAALKQGWMCCVADRWIHLTTGAFGPDGRYVLAVHVAEDVQYTDGTVELPQTSEGIDSDDESAAHARDTVTGVVARLFADGNRTWT
>CP027433.1|AVL99994.1|1407089_1407674_-|hypothetical-protein
MTSGNSLGSTLLDGVDHIVDRTWKSLLGIGIVSIILGIIVLVWPGKTLAVVAILFGIYLVISGIFQVIATFGAPDASGWWRFLTFVSGALSFILGIFALRNIGESLILLAIWIGISWIFRGIAGFSLYVGSAGLPGRAAGILLSIVTVVAGVILIVSPVTSIATLALVTGILLIVVGVVEVIDAFTLKSSAPTS
>CP027433.1|AVL99993.1|1405467_1406865_-|HNH-endonuclease
MDSVALITIADLLADDVTPTATHEPNLADFFDAARPVDDDGELLAVTAALLRLRNTVDHALARGAATIERVGLPARKHVRSAVGILTELGAAPAVAYRAARLGRACGDTTVGAVTRGMRDGAVSAELGDAVVTGLDHVDDRAVLSEDDRSRVLHSLLVQTTPARVKEKAHAWAIRLAPATGDDGQVPVAERDDLNAMTLDRTDDGRVAVTVDLDVVAGEELSAALDPLTRPVPEPDGSEDKRSAKRRRADAFTHIVRTFLSHSDRPESGGVLPHVTLTVPAAVVADGRLVDAVARPEGDQSVRLPRADLDADVTGVPSLGFSGPVSARTAELVMCDASVALALLDEHGVPLNVGREKRLFPPGLRKALAIRDHGCAFPGCGLPPSWCDAHHAEHWENGGPTCLDNGVLLCRRHHTLIHHGGWQVFIGHDRHPWFVPPADPDHPKQRTEPIPSNSRRTLTLLPGAA
>CP027433.1|AVM02071.1|1404836_1405157_+|antibiotic-biosynthesis-monooxygenase
MILIVAKFKVKPEHADDWPELSREFTEATRAEPGNLWFDWSRSVDDPHEYVLVEAFQDDAAEAHVTSDHFRKAQRELPPLLQETPRARNVQLDRDEWDALGELAVE
>CP027433.1|AVM00002.1|1426051_1426294_+|hypothetical-protein
MSRVIQVRGLADETHDALVRAAGARGMSLSQYLRGELEAIARRAEVSRRNLEVVRVTQSAVGTTVSRDDILSALTAGRRE
>CP027433.1|AVM00003.1|1426290_1426671_+|VapC-toxin-family-PIN-domain-ribonuclease
MKVVDAGVIVELLLGGLSPDALGINELAVPHLIDCEVLSVLRTLERRQRITALQADYAERGFTAMSLTRYPMDWLRSRIWELRHNLSAYDAAYVALAEFLDAGSLLTTDARLARAPGVRCGVELLS
>CP027433.1|AVM00004.1|1426722_1428219_+|hypothetical-protein
MTGSEPVRGVLACDGAHVQCHECGDWYRSLTTHIRLAHGMSDDEYRYEWDLPAATRLASDDVRNTARANAMQRVDRAGPLAVPRFLPGTYVEGGAVAAEYDDRARRLWTERLQAAGWASWEAAVDWAVEHDKTWSDIAARLGITHQQARTVGMAHGVVLPPLWQRMVVVARDHVDRYGTLLNTTGRLSAWLSRTRHESKTKRLPRRAVAALDRLDPDWRLDREARRGAMRRRKVANGHQVSSFRTFDAQVRAAGFEGAAGLLRHGIVEHLGPSELGDLVGVRGDSLLKRMTVGNPENPFDATEELCSSVFGMLDDDGSRVQCHECGLWFGVLYRHLTWHTGDDGGPLSAEAYRKRHGLPADLPLRSDGAPETLSGQWDAHLQEAGFASWEDALAAMAQDHLGLSELGERLGVRGDALPAVLAREAPGDPWAATEPFRVSRFGHLEDDGERSQCHECGLWYRRVGSHVSAHSGDDGEPLTFDEYRARPRGRAGAAARRE
>CP027433.1|AVM00005.1|1428235_1429444_+|hypothetical-protein
MSEAGYGTWDEVLADLARSHRNLRDFADQVGVKDASVVKELLKIRPEGTWAPTEPFRLSTFGHLEDDGERVQCHECGLWFAMLMRGHVGVHVDGKGRPLTAEAYRKRHGLAADAALRSVPRNAPAVTEDWRPRLAQLGYSSWEEALAGLARGHRNLKDLAVDCGRKDTAAESLFRDRPASVWDATAPHRLSGPGYLADDGSRTQCHECGLWFEHLDRHVSSHRGDDGRALSAESYREKYGLPAEFTLRSVPRADGEADSLWARRLGKAGFATWEEALVDLAKKHRNLKDLADRMGVAVNLVTKALLRSRPVDTWAPTEPYRLGQYGHIEDDGAQSQCHECGLWFERLGRHTKVHLDTDGTPLTWERYQERYGVQRAPNWSREKERRAKKPLMVSEPDGTIGA
>CP027433.1|AVM00006.1|1429440_1429902_+|hypothetical-protein
MSEHEAINRFRGDHYFLSNFFQVDFEMPVLGRVPSAEHAYQALKADDDRTRRKILDAESPGEAKRLGQSVPVRKDWQVGGRVGAMIQVLAVKFEVPQMAERLQATGCARLVEGNEHHDNFWGDCTCGAAACEERGTNMLGELLMWIRADTGAW
>CP027433.1|AVM00007.1|1430002_1430224_-|hypothetical-protein
MPVAPTSAHVDRRALEVQDRLAQRGHHRAAIVPDLLIAAIAEYADLTVLHVDKDFELIAGVADQPIERLAGDF
>CP027433.1|AVM00008.1|1430277_1430502_-|hypothetical-protein
MTDILIRNIDDDDLRHIDALAAELGISRSELLRRETKDLARRHALQQVTLDDIRRSVDLAQGVLDEDLMKQAWG
>CP027433.1|AVM00009.1|1430765_1432349_+|GMP-synthase-(glutamine-hydrolyzing)
MTETSADHPRPVLVVDFGAQYAQLIARRVREARIYSEVIAHDAPLEEYLAKDPAAIVLSGGPSSVYAEGAPTIDPQLFEQGIPVFGICYGFQKMTDALGGTVANTGGREFGRTMMNVAGDGGVLHHGIENAPVWMSHNDAVQVAPEGFTVTASTPGAPVAAFESVERKMAGVQYHPEVLHTPHGQEVLTRFLYEVAGLKPTWTAANIAESLIADVREQVGDDGLAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEREQVQTDFVAATGARLVTVDAEDIFLGHLAGVSDPETKRKIIGREFIRSFEGAVSEVLGDQAASGKKVEYLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPEDLEFTLVEPLRLLFKDEVRAVGRELGLPEEIVNRQPFPGPGLAIRIVGDVTKDRLELLRKADLIAREELTAAGLDNQIWQCPVVLLADVRSVGVQGDGRTYGHPIVLRPVSSEDAMTADWTRVPYEVLEVISTRITNEVPDVNRVVLDVTSKPPGTIEWE
>CP027433.1|AVM00010.1|1432652_1432862_-|hypothetical-protein
MTDPTDNLPEVRRAPVLAVVGVLALAVAGWGLTGGPDLPDLELLPWILIGVGTLAGVILIASGFRRTTR
>CP027433.1|AVM00011.1|1432858_1434193_-|PspC-domain-containing-protein
MNTSTLSDLWSTRPVRRRKGHKVAGVCSGIGARYNVDPTLVRVAFVVATLFGGSGVLAYLVAVVAMPSDRTRSDGTPRPDHVAGMSFGKLVLLGIIAIVLVSSFGGGGVWSGGGVAGTILLGVGWWLLYQRTPVPPPGTSADTLSKMHDDPAWTAPYPAAGPVVVPVDASAPTGAGDPEGAAPPDAAGERPSDAPAAGTAPTVAATSPSDTLVDRNQPVPPAWDPLGVAPFAWDLPEPTPAPQPPEVKVPSSPLTPITLGLAVLTAAAGSVAHLLGAEWFTVGRIASLSLAVLGLGLVIAAFQRRPEGTHSTGLIWLAALGAGIVVVSTLVQASDWRPTAGGIGERKYQVTQQSELQEQYDLSIGNIQLDLRELGSLDEDKTITLNQSIGEISVQLPEKVRVRAVCDVTVGNYDCPQGVVGGGEDGPVLTINARVGMGNVEMKR

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Crispr_ID: CP027433_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027433_6

1432516-1432593

Unclear

Consensus_repeat	Method
GGTCTCGATACGCCGACTCACTCCGT	CRISPRCasFinder

1 spacers

cas2,cas1

The CRISPR arrays of CP027433_6

>merge|CP027433|6|1432516-1432593|CRISPRCasFinder
GGTCTCGATACGCCGACTCACTCCGTTCGCCGGCTACTCGACCAGCAAAAGGGGTCTCGATACGCCGACTCACTCCGT

>CP027433|6|5|1432516-1432593|CRISPRCasFinder
GGTCTCGATACGCCGACTCACTCCGT	TCGCCGGCTACTCGACCAGCAAAAGG
GGTCTCGATACGCCGACTCACTCCGT

Protein	Signature genes	Signature genes Name	Protein_function
CP027433.1\|AVM00017.1\|1438683_1440306_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176458
CP027433.1\|AVM00006.1\|1429440_1429902_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271319
CP027433.1\|AVM00012.1\|1434309_1435665_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|226951
CP027433.1\|AVM00009.1\|1430765_1432349_+\|GMP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|234614
CP027433.1\|AVM02073.1\|1437979_1438687_+\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM00005.1\|1428235_1429444_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227293
CP027433.1\|AVM00015.1\|1436704_1436920_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367272
CP027433.1\|AVM00002.1\|1426051_1426294_+\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM00014.1\|1436283_1436715_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368199
CP027433.1\|AVM00008.1\|1430277_1430502_-\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM00011.1\|1432858_1434193_-\|PspC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377200
CP027433.1\|AVM02072.1\|1415621_1417232_+\|CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187766
CP027433.1\|AVM00010.1\|1432652_1432862_-\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM00013.1\|1435661_1436318_+\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|225107
CP027433.1\|AVM00001.1\|1417228_1417528_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
CP027433.1\|AVM00004.1\|1426722_1428219_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368446
CP027433.1\|AVM00016.1\|1437108_1437693_-\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM00007.1\|1430002_1430224_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350322
CP027433.1\|AVM00003.1\|1426290_1426671_+\|VapC-toxin-family-PIN-domain-ribonuclease	unknown	unknown	gnl\|CDD\|350221
CP027433.1\|AVM00018.1\|1440325_1441558_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP027433.1\|AVM00017.1\|1438683_1440306_+\|hypothetical-protein	gnl\|CDD\|176458	cd03468, PolY_like, DNA Polymerase Y-family. Y-family DNA polymerases are a specialized subset of polymerases that facilitate translesion synthesis (TLS), a process that allows the bypass of a variety of DNA lesions. Unlike replicative polymerases, TLS polymerases lack proofreading activity and have low fidelity and low processivity. They use damaged DNA as templates and insert nucleotides opposite the lesions. The active sites of TLS polymerases are large and flexible to allow the accomodation of distorted bases. Expression of Y-family polymerases is often induced by DNA damage and is believed to be highly regulated. TLS is likely induced by the monoubiquitination of the replication clamp PCNA, which provides a scaffold for TLS polymerases to bind in order to access the lesion. Because of their high error rates, TLS polymerases are potential targets for cancer treatment and prevention.	9.95555e-41
CP027433.1\|AVM00006.1\|1429440_1429902_+\|hypothetical-protein	gnl\|CDD\|271319	cd15457, NADAR, Escherichia coli swarming motility protein YbiA and related proteins. This family of uncharacterized domains was initially classified as Domain of Unknown Function (DUF1768). It contains members such as the E. coli swarming motility protein YbiA. Mutations in YbiA cause defects in Escherichia coli swarming, but not necessarily in motility. More recently, this family has been predicted to be involved in NAD-utilizing pathways, likely to act on ADP-ribose derivatives, and has been named the NADAR (NAD and ADP-ribose) superfamily.	6.43591e-33
CP027433.1\|AVM00009.1\|1430765_1432349_+\|GMP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
CP027433.1\|AVM00005.1\|1428235_1429444_+\|hypothetical-protein	gnl\|CDD\|227293	COG4957, COG4957, Predicted transcriptional regulator [Transcription].	0.000161714
CP027433.1\|AVM00015.1\|1436704_1436920_-\|hypothetical-protein	gnl\|CDD\|367272	pfam02956, TT_ORF1, TT viral orf 1. TT virus (TTV), isolated initially from a Japanese patient with hepatitis of unknown aetiology, has since been found to infect both healthy and diseased individuals and numerous prevalence studies have raised questions about its role in unexplained hepatitis. ORF1 is a large 750 residue protein. The N-terminal half of this protein corresponds to the capsid protein.	0.000211188
CP027433.1\|AVM00014.1\|1436283_1436715_-\|hypothetical-protein	gnl\|CDD\|368199	pfam04931, DNA_pol_phi, DNA polymerase phi. This family includes the fifth essential DNA polymerase in yeast EC:2.7.7.7. Pol5p is localized exclusively to the nucleolus and binds near or at the enhancer region of rRNA-encoding DNA repeating units.	0.000248181
CP027433.1\|AVM02072.1\|1415621_1417232_+\|CRISPR-associated-endonuclease-Cas4/Cas1	gnl\|CDD\|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.46437e-88
CP027433.1\|AVM00011.1\|1432858_1434193_-\|PspC-domain-containing-protein	gnl\|CDD\|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	1.57956e-18
CP027433.1\|AVM00007.1\|1430002_1430224_-\|hypothetical-protein	gnl\|CDD\|350322	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins. This subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC3 and VapC21 toxins. It belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is a PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	8.23113e-24
CP027433.1\|AVM00013.1\|1435661_1436318_+\|DNA-binding-response-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	8.34688e-60
CP027433.1\|AVM00001.1\|1417228_1417528_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.03936e-19
CP027433.1\|AVM00004.1\|1426722_1428219_+\|hypothetical-protein	gnl\|CDD\|368446	pfam05443, ROS_MUCR, ROS/MUCR transcriptional regulator protein. This family consists of several ROS/MUCR transcriptional regulator proteins. The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti. This gene encodes a 15.5-kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid and is necessary for succinoglycan production. Sinorhizobium meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of alfalfa nodules. MucR from Sinorhizobium meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan.	4.95906e-06
CP027433.1\|AVM00012.1\|1434309_1435665_+\|histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	6.00959e-31
CP027433.1\|AVM00003.1\|1426290_1426671_+\|VapC-toxin-family-PIN-domain-ribonuclease	gnl\|CDD\|350221	cd09873, PIN_Pae0151-like, VapC-like PIN domain of the Pyrobaculum aerophilum Pae0151 and Pae2754 proteins and homologs. Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of the Pyrobaculum aerophilum proteins, Pae0151 and Pae2754, and homologs are included in this subfamily. They are similar to the PIN domains of the Mycobacterium tuberculosis VapC and Neisseria gonorrhoeae FitB toxins of the prokaryotic toxin/antitoxin operons, VapBC and FitAB, respectively, which are believed to be involved in growth inhibition by regulating translation. These toxins are nearly always co-expressed with an antitoxin, a cognate protein inhibitor, forming an inert protein complex. Disassociation of the protein complex activates the ribonuclease activity of the toxin by an, as yet undefined mechanism. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	3.09851e-23

>CP027433.1|AVM00009.1|1430765_1432349_+|GMP-synthase-(glutamine-hydrolyzing)
MTETSADHPRPVLVVDFGAQYAQLIARRVREARIYSEVIAHDAPLEEYLAKDPAAIVLSGGPSSVYAEGAPTIDPQLFEQGIPVFGICYGFQKMTDALGGTVANTGGREFGRTMMNVAGDGGVLHHGIENAPVWMSHNDAVQVAPEGFTVTASTPGAPVAAFESVERKMAGVQYHPEVLHTPHGQEVLTRFLYEVAGLKPTWTAANIAESLIADVREQVGDDGLAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEREQVQTDFVAATGARLVTVDAEDIFLGHLAGVSDPETKRKIIGREFIRSFEGAVSEVLGDQAASGKKVEYLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPEDLEFTLVEPLRLLFKDEVRAVGRELGLPEEIVNRQPFPGPGLAIRIVGDVTKDRLELLRKADLIAREELTAAGLDNQIWQCPVVLLADVRSVGVQGDGRTYGHPIVLRPVSSEDAMTADWTRVPYEVLEVISTRITNEVPDVNRVVLDVTSKPPGTIEWE
>CP027433.1|AVM00008.1|1430277_1430502_-|hypothetical-protein
MTDILIRNIDDDDLRHIDALAAELGISRSELLRRETKDLARRHALQQVTLDDIRRSVDLAQGVLDEDLMKQAWG
>CP027433.1|AVM00007.1|1430002_1430224_-|hypothetical-protein
MPVAPTSAHVDRRALEVQDRLAQRGHHRAAIVPDLLIAAIAEYADLTVLHVDKDFELIAGVADQPIERLAGDF
>CP027433.1|AVM00006.1|1429440_1429902_+|hypothetical-protein
MSEHEAINRFRGDHYFLSNFFQVDFEMPVLGRVPSAEHAYQALKADDDRTRRKILDAESPGEAKRLGQSVPVRKDWQVGGRVGAMIQVLAVKFEVPQMAERLQATGCARLVEGNEHHDNFWGDCTCGAAACEERGTNMLGELLMWIRADTGAW
>CP027433.1|AVM00005.1|1428235_1429444_+|hypothetical-protein
MSEAGYGTWDEVLADLARSHRNLRDFADQVGVKDASVVKELLKIRPEGTWAPTEPFRLSTFGHLEDDGERVQCHECGLWFAMLMRGHVGVHVDGKGRPLTAEAYRKRHGLAADAALRSVPRNAPAVTEDWRPRLAQLGYSSWEEALAGLARGHRNLKDLAVDCGRKDTAAESLFRDRPASVWDATAPHRLSGPGYLADDGSRTQCHECGLWFEHLDRHVSSHRGDDGRALSAESYREKYGLPAEFTLRSVPRADGEADSLWARRLGKAGFATWEEALVDLAKKHRNLKDLADRMGVAVNLVTKALLRSRPVDTWAPTEPYRLGQYGHIEDDGAQSQCHECGLWFERLGRHTKVHLDTDGTPLTWERYQERYGVQRAPNWSREKERRAKKPLMVSEPDGTIGA
>CP027433.1|AVM00004.1|1426722_1428219_+|hypothetical-protein
MTGSEPVRGVLACDGAHVQCHECGDWYRSLTTHIRLAHGMSDDEYRYEWDLPAATRLASDDVRNTARANAMQRVDRAGPLAVPRFLPGTYVEGGAVAAEYDDRARRLWTERLQAAGWASWEAAVDWAVEHDKTWSDIAARLGITHQQARTVGMAHGVVLPPLWQRMVVVARDHVDRYGTLLNTTGRLSAWLSRTRHESKTKRLPRRAVAALDRLDPDWRLDREARRGAMRRRKVANGHQVSSFRTFDAQVRAAGFEGAAGLLRHGIVEHLGPSELGDLVGVRGDSLLKRMTVGNPENPFDATEELCSSVFGMLDDDGSRVQCHECGLWFGVLYRHLTWHTGDDGGPLSAEAYRKRHGLPADLPLRSDGAPETLSGQWDAHLQEAGFASWEDALAAMAQDHLGLSELGERLGVRGDALPAVLAREAPGDPWAATEPFRVSRFGHLEDDGERSQCHECGLWYRRVGSHVSAHSGDDGEPLTFDEYRARPRGRAGAAARRE
>CP027433.1|AVM00003.1|1426290_1426671_+|VapC-toxin-family-PIN-domain-ribonuclease
MKVVDAGVIVELLLGGLSPDALGINELAVPHLIDCEVLSVLRTLERRQRITALQADYAERGFTAMSLTRYPMDWLRSRIWELRHNLSAYDAAYVALAEFLDAGSLLTTDARLARAPGVRCGVELLS
>CP027433.1|AVM00002.1|1426051_1426294_+|hypothetical-protein
MSRVIQVRGLADETHDALVRAAGARGMSLSQYLRGELEAIARRAEVSRRNLEVVRVTQSAVGTTVSRDDILSALTAGRRE
>CP027433.1|AVM00001.1|1417228_1417528_+|CRISPR-associated-endonuclease-Cas2
MTARLSRLLVAYDIVDDRRRTRLANILQSFGDRIQFSVFLVDVTDAQEVRMRAKVNAEIDGRVDSVLFCRLGPTATTGSTSITYLGCRRTTTDDTDFVV
>CP027433.1|AVM02072.1|1415621_1417232_+|CRISPR-associated-endonuclease-Cas4/Cas1
MDGGNRTELPISLVVHTVFCERRAWLEAVGERVDSAQIEAGLVAHARVDSPRVSPIESTSMDIDHSDLGIVGKCDVVRHLPGRVSIVEYKATPTRRVPEVTASNIVQLALQRLCLESGGVVIESQEVYFTNHRRSVSVDLTESDFDEARKWVDMTREIVDRQTAPPPLVDDPRCRFCSHVSVCLPDEHHRNELNHVRRVAVSNPGGEVLHLTTAGSRASLKSGRVVIQKAREEVASLPVERVVGLVVHGNVDVSSALIREMLWRGYGIVWCSSNGRVVGHARSARTPNGLPRLQQHVRSSVGDIFIAREMIAPKVANQATQLRRSSRADVIEIVRKMREISRNIDQAQSVSQIVGLEGEAAALYFREFGSCIANGADPLFVDGFDGRAGRRARDPLNAAFNYAYGLLAAECVRALHACGLDPHAGFVHSAVRNKPALALDLMEQFRPIIADSVVLSVINNGQLTTVDFHSLLGAMRLSTTGRKAITKEYERRVSQEFTHPVYKYKVSWRRAIEVQARMLLGVLDGTGHHYVGIRTR
>CP027433.1|AVM00010.1|1432652_1432862_-|hypothetical-protein
MTDPTDNLPEVRRAPVLAVVGVLALAVAGWGLTGGPDLPDLELLPWILIGVGTLAGVILIASGFRRTTR
>CP027433.1|AVM00011.1|1432858_1434193_-|PspC-domain-containing-protein
MNTSTLSDLWSTRPVRRRKGHKVAGVCSGIGARYNVDPTLVRVAFVVATLFGGSGVLAYLVAVVAMPSDRTRSDGTPRPDHVAGMSFGKLVLLGIIAIVLVSSFGGGGVWSGGGVAGTILLGVGWWLLYQRTPVPPPGTSADTLSKMHDDPAWTAPYPAAGPVVVPVDASAPTGAGDPEGAAPPDAAGERPSDAPAAGTAPTVAATSPSDTLVDRNQPVPPAWDPLGVAPFAWDLPEPTPAPQPPEVKVPSSPLTPITLGLAVLTAAAGSVAHLLGAEWFTVGRIASLSLAVLGLGLVIAAFQRRPEGTHSTGLIWLAALGAGIVVVSTLVQASDWRPTAGGIGERKYQVTQQSELQEQYDLSIGNIQLDLRELGSLDEDKTITLNQSIGEISVQLPEKVRVRAVCDVTVGNYDCPQGVVGGGEDGPVLTINARVGMGNVEMKR
>CP027433.1|AVM00012.1|1434309_1435665_+|histidine-kinase
MRTQIAHDDAQETTPKLVRRHGGKVIAGVAGGLADHLGVDVFRVRVVFVVLTALAGAGAFAYAALWFLCPVGTDTQRPSPRERRQAYGLATLGVIALITSAALAANAPAQQTVAVIFVLGGAALVWREVDVTGVGTGSHRSTFTWLRLVLGAVLVIGGLVVMVLAGGSALGGINSTVLAVLATLVGVVLLTVPLWMRLLRALDAERAERIRNAEREEIASHLHDSVLQTLALIQKQSGDPETVARLARRQERELRTWLFGDPAQRRESFAAAVSALAAEVEETYGTEIEAVTVGDTTREELRDETWARSASALVAATREALVNAAKHSGAQKVDVYAEVLDDQVEVFVRDRGKGFDPDLVDDDRQGIAKSIRARMERAGGTVELRSAPGRGTNVTLTLPRASTLRQGEGRQSTAGEADAAGEADAAGEADAAGGPDSARNQERHQQHEEAS
>CP027433.1|AVM00013.1|1435661_1436318_+|DNA-binding-response-regulator
MRYRVFLVDDHAVFRSGVRAELASENHMEVVGDAGTVPEAVAGIVEQRPDVVLLDVHMPGGGGVAVLRGVTDALGSDAPVFLALSVSDAAADVIATIRAGARGYVTKTISGGELADAVRRVAEGDAVFSPRLAGFVLDSFTGRSPVPEPALDPELDSLTKREMEVLRLLARGYTYREIAEELFISVKTVETHASNVLRKTQQSNRNALTRWAVNRQIG
>CP027433.1|AVM00014.1|1436283_1436715_-|hypothetical-protein
MLTDPDWFLGGLLREVGAVAYLDRGYDLLNVPVLSFCAGAMIVLTLLCGATALTVSPLRWRITITRTDASDSDAQDPDTPDTVEDDTDDQDREVGDTAGSETDEDETDGSVDDEDHASDDQADEDETENAPPVTRSGDSPPSG
>CP027433.1|AVM00015.1|1436704_1436920_-|hypothetical-protein
MERYRSYLRHRTGRVRLRPRGPRLVRHRRVRRRRPRGLHAAAIEHQGHRARALAGRPLLGRRGGGAHRRAD
>CP027433.1|AVM00016.1|1437108_1437693_-|hypothetical-protein
MQQRIYAAVIALLSIVALALTNFPWADGRDVGFDFAWNGFGRAEYLGQDVSSGSLDDLSVAPLGLWVLLACVVALLAAAATAVPALAGPAGPLRWVAALCTSVAAAVPITVLADPAVFLEGPFRATDSEAILRLDHYSGIVSQIMQSGTLIALIVVLFLTSAACVAAAVQVKRVPTVTSTDPPESETPRSERSD
>CP027433.1|AVM02073.1|1437979_1438687_+|hypothetical-protein
MSLGASVGGTGWNPQVLPVPEPLAELLPRRGLTPGGVVAVSGAMTLPVALLAAATASGATAALVGLPQLNLAMAADLGADLDRIAVIGPDSAGLNDCDRQWDRLEVAGVLLDGIDLVLVGVEHVTPSRARVLAGRARRQGATLLAVGPPDAWPGAGVRMHAQIAGYRHLPLRRNGYGRIGGLQVDVRAAGSGISPRGVRCELVVPGMGEEGALRLVGVEPEGGRIATPNRLRVAN
>CP027433.1|AVM00017.1|1438683_1440306_+|hypothetical-protein
MNGRGGKSSARVLALWCPDWPATAAARGLKVAPTEPIAVLASGKVIACSRAARQTGVRRGMRKRQAQAACPGLVVAPDDPNRDGRLFDPVVTAVTGVVPMTEVLRPGLLAVAADRAARYFGGEPELAEAVITAVEGLDVVARVGLADQLFTAVLAARSGLVIPPGEGRAFLSGRPIADLALEPSFSAPGREDLVNLLWRLGIRTLGAFSELDVADVASRFSADGVVAHRLAGAEPGRRPSRAPIPLGLAVEHECEPPVDRIDTAAFLGRRLAEELHRRLSSASLACTRLTVHAVTESGQRCSRTWRCAEPLTPAATADRIRWQLEGWLTSAGSAVDAPDSPLVRLLLEPTELVNPSALQHALTGAGLPADTGAGVLGDRARRCLIRVQGLLGGDAVRVPVRSGGRGPAERVSLVTYGDESVPERSPRAAWPDALARPVPSLLSSGEAELLGADGGPVAVTPRGAFSAEPVEIRLGRAVHPIGWWAGPWPFGLDGPGGFACPRVDAVKARAQVLLDSTTGPARALLLCYRDARWNIEGVYE
>CP027433.1|AVM00018.1|1440325_1441558_+|hypothetical-protein
MPRYDRVRFIGYAVPTTPADIVPVGDPNGAGNVAGTYRAAPDLEADVYGRAQTLKAAVDTARAALPTGDGVLNVFLAPEFYWHGPMGPYMHGPGDPDPADVILDELQKHFPVDEYPDFLLVLGTAISAEVADLGAVMRQSSTIVSNDVVRALGEGWQQADGPLAVVVFDALVNFIKNCHAYAQVEVRNRAIILGPAEFDGVEVGLGVRAITTEKYFVSNEDLLLWDVTGKPVITEQMSAYPILDTSGGDFKFEPRDPYAIFRVAGSDPVTVGVEICLDHSDHRMRKSVDRSPWPARGDGLDLHLIPSCGMQLHRPSVAARAGGWAFNCDGQYALGDPNRPALLSTARSARVLLLCRLRGRSRLCLRSAHAARPDHDCSAGIERSGGRRSRCRIRRRAGSSGHGAPGGAGT

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Crispr_ID: CP027433_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027433_7

1549555-1549658

Orphan

Consensus_repeat	Method
CCCATCGCTCGTTGAGCCGGTGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027433_7

>merge|CP027433|7|1549555-1549658|CRISPRCasFinder
CCCATCGCTCGTTGAGCCGGTGCGAAACGCCGGCCGAGCCCCCTCGCTCGTTGGAGCCGGTGCGAGGCGCCGGCGGAGCCCCCTCGCTCGTTGAGCCGGTGCGA

>CP027433|7|6|1549555-1549658|CRISPRCasFinder
CCCATCGCTCGTTGAGCCGGTGCGA	AACGCCGGCCGAGCCCCCTCGCTCGTTGGAGCCGGTGCGAGGCGCCGGCGGAGC
CCCCTCGCTCGTTGAGCCGGTGCGA

Protein	Signature genes	Signature genes Name	Protein_function
CP027433.1\|AVM00099.1\|1552049_1553408_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340927
CP027433.1\|AVM00092.1\|1545003_1546017_-\|2-nitropropane-dioxygenase	unknown	unknown	gnl\|CDD\|367316
CP027433.1\|AVM00094.1\|1546868_1547705_-\|dienelactone-hydrolase	unknown	unknown	gnl\|CDD\|223489
CP027433.1\|AVM00093.1\|1546155_1546872_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225928
CP027433.1\|AVM00107.1\|1561339_1563040_+\|AMP-dependent-synthetase	unknown	unknown	gnl\|CDD\|341278
CP027433.1\|AVM00102.1\|1555766_1556549_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|180295
CP027433.1\|AVM00106.1\|1560321_1561140_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225107
CP027433.1\|AVM00100.1\|1553518_1554454_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
CP027433.1\|AVM00096.1\|1548127_1548742_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367888
CP027433.1\|AVM00101.1\|1554633_1555770_+\|3-hydroxyisobutyryl-CoA-hydrolase	unknown	unknown	gnl\|CDD\|379770
CP027433.1\|AVM00098.1\|1549712_1551506_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|367155
CP027433.1\|AVM00097.1\|1548742_1549375_-\|peptidase-S51-dipeptidase-E	unknown	unknown	gnl\|CDD\|225877
CP027433.1\|AVM00090.1\|1543029_1544268_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
CP027433.1\|AVM00104.1\|1558153_1559326_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173851
CP027433.1\|AVM02086.1\|1542238_1542778_-\|GtrA-family-protein	unknown	unknown	gnl\|CDD\|377229
CP027433.1\|AVM00103.1\|1556611_1558147_+\|methylmalonate-semialdehyde-dehydrogenase-(CoA-acylating)	unknown	unknown	gnl\|CDD\|143404
CP027433.1\|AVM00095.1\|1547701_1548082_-\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|211538
CP027433.1\|AVM00091.1\|1544356_1544869_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|178534
CP027433.1\|AVM00105.1\|1559348_1560218_+\|3-hydroxyisobutyrate-dehydrogenase	unknown	unknown	gnl\|CDD\|130753
CP027433.1\|AVM00089.1\|1540893_1542216_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|223715

Protein	Function_ID	Function_description	E-value
CP027433.1\|AVM00099.1\|1552049_1553408_-\|MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.88537e-149
CP027433.1\|AVM00092.1\|1545003_1546017_-\|2-nitropropane-dioxygenase	gnl\|CDD\|367316	pfam03060, NMO, Nitronate monooxygenase. Nitronate monooxygenase (NMO), formerly referred to as 2-nitropropane dioxygenase (NPD) (EC:1.13.11.32), is an FMN-dependent enzyme that uses molecular oxygen to oxidize (anionic) alkyl nitronates and, in the case of the enzyme from Neurospora crassa, (neutral) nitroalkanes to the corresponding carbonyl compounds and nitrite. Previously classified as 2-nitropropane dioxygenase, but it is now recognized that this was the result of the slow ionization of nitroalkanes to their nitronate (anionic) forms. The enzymes from the fungus Neurospora crassa and the yeast Williopsis saturnus var. mrakii (formerly classified as Hansenula mrakii) contain non-covalently bound FMN as the cofactor. Active towards linear alkyl nitronates of lengths between 2 and 6 carbon atoms and, with lower activity, towards propyl-2-nitronate. The enzyme from N. crassa can also utilize neutral nitroalkanes, but with lower activity. One atom of oxygen is incorporated into the carbonyl group of the aldehyde product. The reaction appears to involve the formation of an enzyme-bound nitronate radical and an a-peroxynitroethane species, which then decomposes, either in the active site of the enzyme or after release, to acetaldehyde and nitrite.	1.61544e-71
CP027433.1\|AVM00094.1\|1546868_1547705_-\|dienelactone-hydrolase	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	1.00069e-14
CP027433.1\|AVM00093.1\|1546155_1546872_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225928	COG3393, COG3393, Predicted acetyltransferase [General function prediction only].	8.32945e-23
CP027433.1\|AVM00107.1\|1561339_1563040_+\|AMP-dependent-synthetase	gnl\|CDD\|341278	cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS). MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. MACS enzymes are localized to mitochondria.	0
CP027433.1\|AVM00102.1\|1555766_1556549_+\|enoyl-CoA-hydratase	gnl\|CDD\|180295	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional.	1.99586e-135
CP027433.1\|AVM00106.1\|1560321_1561140_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	4.54006e-16
CP027433.1\|AVM00100.1\|1553518_1554454_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	9.60069e-31
CP027433.1\|AVM00096.1\|1548127_1548742_+\|hypothetical-protein	gnl\|CDD\|367888	pfam04266, ASCH, ASCH domain. The ASCH domain adopts a beta-barrel fold similar to the pfam01472 domain. It is thought to function as an RNA-binding domain during coactivation, RNA-processing and possibly during prokaryotic translation regulation.	0.00656339
CP027433.1\|AVM00101.1\|1554633_1555770_+\|3-hydroxyisobutyryl-CoA-hydrolase	gnl\|CDD\|379770	pfam16113, ECH_2, Enoyl-CoA hydratase/isomerase. This family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase. This family differs from pfam00378 in the structure of it's C-terminus.	1.24099e-154
CP027433.1\|AVM00098.1\|1549712_1551506_+\|HNH-endonuclease	gnl\|CDD\|367155	pfam02720, DUF222, Domain of unknown function (DUF222). This family is often found associated to the N-terminus of the HNH endonuclease domain pfam01844. The function of this domain is uncertain. This family has been called the 13E12 repeat family.	2.5432e-29
CP027433.1\|AVM00097.1\|1548742_1549375_-\|peptidase-S51-dipeptidase-E	gnl\|CDD\|225877	COG3340, PepE, Peptidase E [Amino acid transport and metabolism].	8.57856e-35
CP027433.1\|AVM00090.1\|1543029_1544268_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	3.9483e-153
CP027433.1\|AVM00104.1\|1558153_1559326_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173851	cd01162, IBD, Isobutyryl-CoA dehydrogenase. Isobutyryl-CoA dehydrogenase (IBD) catalyzes the alpha, beta- dehydrogenation of short branched chain acyl-CoA intermediates in valine catabolism. It is predicted to be a homotetramer.	0
CP027433.1\|AVM02086.1\|1542238_1542778_-\|GtrA-family-protein	gnl\|CDD\|377229	pfam04138, GtrA, GtrA-like protein. Members of this family are predicted to be integral membrane proteins with three or four transmembrane spans. They are involved in the synthesis of cell surface polysaccharides. The GtrA family are a subset of this family. GtrA is predicted to be an integral membrane protein with 4 transmembrane spans. It is involved is in O antigen modification by Shigella flexneri bacteriophage X (SfX), but does not determine the specificity of glucosylation. Its function remains unknown, but it may play a role in translocation of undecaprenyl phosphate linked glucose (UndP-Glc) across the cytoplasmic membrane. Another member of this family is a DTDP-glucose-4-keto-6-deoxy-D-glucose reductase, which catalyzes the conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-D-fucose, which is involved in the biosynthesis of the serotype-specific polysaccharide antigen of Actinobacillus actinomycetemcomitans Y4 (serotype b). This family also includes the teichoic acid glycosylation protein, GtcA, which is a serotype-specific protein in some Listeria innocua and monocytogenes strains. Its exact function is not known, but it is essential for decoration of cell wall teichoic acids with glucose and galactose.	2.59846e-15
CP027433.1\|AVM00103.1\|1556611_1558147_+\|methylmalonate-semialdehyde-dehydrogenase-(CoA-acylating)	gnl\|CDD\|143404	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.	0
CP027433.1\|AVM00095.1\|1547701_1548082_-\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	gnl\|CDD\|211538	TIGR00026, Hypothetical_protein_Rv1261c/MT1299/Mb1292c., deazaflavin-dependent oxidoreductase, nitroreductase family. This model represents a family of proteins found in paralogous families in the genera Mycobacterium and Streptomyces. Seven members are in Mycobacterium tuberculosis. Member protein Rv3547 has been characterized as a deazaflavin-dependent nitroreductase. [Unknown function, Enzymes of unknown specificity].	5.72876e-07
CP027433.1\|AVM00091.1\|1544356_1544869_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|178534	PLN02948, PLN02948, phosphoribosylaminoimidazole carboxylase.	2.42549e-90
CP027433.1\|AVM00105.1\|1559348_1560218_+\|3-hydroxyisobutyrate-dehydrogenase	gnl\|CDD\|130753	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase. 3-hydroxyisobutyrate dehydrogenase is an enzyme that catalyzes the NAD+-dependent oxidation of 3-hydroxyisobutyrate to methylmalonate semialdehyde of the valine catabolism pathway. In Pseudomonas aeruginosa, 3-hydroxyisobutyrate dehydrogenase (mmsB) is co-induced with methylmalonate-semialdehyde dehydrogenase (mmsA) when grown on medium containing valine as the sole carbon source. The positive transcriptional regulator of this operon (mmsR) is located upstream of these genes and has been identified as a member of the XylS/AraC family of transcriptional regulators. 3-hydroxyisobutyrate dehydrogenase shares high sequence homology to the characterized 3-hydroxyisobutyrate dehydrogenase from rat liver with conservation of proposed NAD+ binding residues at the N-terminus (G-8,10,13,24 and D-31). This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446). [Energy metabolism, Amino acids and amines].	7.07759e-108
CP027433.1\|AVM00089.1\|1540893_1542216_+\|ATP-binding-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.33902e-36

>CP027433.1|AVM00097.1|1548742_1549375_-|peptidase-S51-dipeptidase-E
MNLLLLSWGASAVPGFLADHTGKEPGDVRLGYLNDAMLPYQNEEFVEIDRYRLIDFGYRPITVTARDVPTAESFADILDGLDALYVCGGETFVLLDHLRRNSLADVLIDKVRDGLPYIGLSAGAVIAGASIEPVSTMDDPTSAPGLSDYRGLCFVGTSIIPHADGRIELFPPELIADTVREYSPRFDLTLLHDDQALLVSGDEVTVVESR
>CP027433.1|AVM00096.1|1548127_1548742_+|hypothetical-protein
MLISKPIAEQIRAGTVTAQYRRWDAPRVKVGGTQLTPAGLVRFTRVARVNDLDKLTDRAARAAGMKDAQALRKALAPRTKRAPSARGSKGGEHVYRINLEWAGEDPRLALREELPNDAACAEILRRTSVIDRRLGDGWTRDTLQWIEEHPRVVSKRLAELREVELQPMKTDIRKLKALGLTISHDVGYELAPRGRAYLDWLRRR
>CP027433.1|AVM00095.1|1547701_1548082_-|nitroreductase-family-deazaflavin-dependent-oxidoreductase
MRVPRLVARANKYVTNPIQGLWAPRLAPWAVVEHVGRISGTAYSTPVLAWVRDGRLSIPLVYGADSDWVQNVLAAGEFMLVRGGRRQHIAGPRILPPDSPDVVGLAKVVGRPFDGVLFGRVTGASS
>CP027433.1|AVM00094.1|1546868_1547705_-|dienelactone-hydrolase
MIGELDGFSAHEFTHHDPATGTITHRYYQRGSGPAVIVIPEIPGITPKVLDFAHRVARAGLTVYLPSLFGDDGASPLPAGASDYPRVAATMTKALGKVCVSREFTIFATGKSSPVVVWLRALAAEAHSECGGPGVGAVGMCVTGGFALAMAVDDRMLAPVLSQPSIPLGFTPGRRRNIDISSRDLETVKARCAKGLQVLGARFEGDRLVPGSRFEFLREQLGDAFIGVELPDSAANPEALIPPHSVLTEHLIDAPGQPTRDTLDQVIEFFRTKLEVAG
>CP027433.1|AVM00093.1|1546155_1546872_-|GNAT-family-N-acetyltransferase
MTIDGTDHRIVPDLRVLDDPFGSALRGRHRRFARSHGTAIAYRPDVSVFFAHPPELTDDDYADLAALAGPGGTVGLRDRSSPLPGDWTVVATYQLVLYTGEEVVPADDPGLVRLTADDVPEMTALVELTAPGPFAPRTIELGTYLGFRDPATGRLLAMAGERAKPDGWTEISAVCTHPDARGRGLARRLIAAVAHEIRESGDLPFLHTTTDNPACALYQSMGFVRRDVLPLEIAQIPR
>CP027433.1|AVM00092.1|1545003_1546017_-|2-nitropropane-dioxygenase
MFDPTSLTHPIVGAPMAGGPSTPELTAAISAAGGFGLLAGAYLSPAALREEITQVRSSTSAPFGVNLFVPEEIPFDAEAFERYRERLVPLADRFGAGLAESVAYTDDAFDEKVAVLLDSGVAAVSFTFGIPAPEVFAAFADRGIAAIATVTGPIEAETAIAAGATALCAQGVEAGGHRGTFHILDDDHALPVRQLVEAVCGLDAPVIAAGGVGRRDDVVALLDAGAAAVQVGTLFLRCPEAGTRAAHRAALSDPAFTETATTRAYSGRLARGLVNDFIRAHTDAAPPVYPQINTLTGPLRKAAADDAQVINLWAGTGWRGAEAIPAADVVEQLSPRP
>CP027433.1|AVM00091.1|1544356_1544869_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MTNPPAPRVGLIMGSDSDWPVMKLAAEALAEFGVPFEVGVVSAHRTPQRMIDYARGAADRGVQVIIAGAGGAAHLPGMVASATPLPVIGVPVPLKYLDGMDSLLSIVQMPAGVPVATVSIGGARNAGLLAVRILGASDGHLRSEMTEFQADLEALVLEKDEKLRRSLLED
>CP027433.1|AVM00090.1|1543029_1544268_+|5-(carboxyamino)imidazole-ribonucleotide-synthase
MPTVAMIGGGQLARMTHQSAIALGQCLRVLAGSPDDPAAAVSADVVLGSHDDLDDLLRAAEGAVALTFDHEGVPLVHLRALEERGVAVRPPSAALQYAQDKMLMRARLAELGLPVPDFADLAGERAAAREALIAFGEAHGWQIVLKAVRGGYDGRGVWLIDPSAGSEQARDEALAVFDAADVVDGSTVLMVEQKVAMRRELSAMIARSPHGQGAAWPVVETVQRNGQCAVVIAPAPDLDPEVAQRAQQMALGLADELGVVGDMAMELFETDDGELLVNELAMRPHNSGHWTMDGAVTSQFEQHLRAVLDYPLGATAPLAGVVVMANVLGAGEAPAMSMDERLHHLMARMPEAKVHLYGKAERPDRKVGHVNVVGRPGQSVDDVRERAERAAHWMSHGVWTDGWDPHGASLDG
>CP027433.1|AVM02086.1|1542238_1542778_-|GtrA-family-protein
MHQFIRFSVIGASGVVVNMAVAIVMNKLNGGTVNAQNVIWSVPGTDFNFRFTALVWIVAFLVANVYNFQLNRTFTFKSAQHAAWWKEFWPFLAVGSVAAVIGLIIKIALTNPSSPIYLPDPPFHEEAGIASREYWSQLIAILVTVPVNFLVNKFWTFRAVRRKPIVEEEIDLDDVSAPD
>CP027433.1|AVM00089.1|1540893_1542216_+|ATP-binding-protein
MRGRLLRTMIASLLAMAVLLGVPLTIGTWAWISATANADLADRLKTMSEYVLAEEAAGQLAGPQDLHLDQFRLLVPPQGNLRLTGPEGITEIGAPLPVERLSQSVTLGEGYTLTLSIPGSEVRPTQWLAVGLLMLVIAASVGGGALIAAITARRLTEPLTRVAERAAAMARGDLSAPWPHYGIDELDRVSAALADANAEIARRLEREGQIIGDVSHQLRSRLTAISLRLDELTLHPDPDVVAEAQEGVAQVERLAAELDELVSASRAEGGARTELDVVALAETLLDDFAAPFESEGRSVRLVVGEPPRPVSGRPGRLREALSTLLDNSLRHGAGTTVVRVDDLGSAGAVRITVTDAGPGVPDEIAPDIFRRGFSGGSGTGVGLSLARALVEADGGRLSLVSRRPAVFSVVVPTGPQTGLAARLPANGPERGADEPGPVHR
>CP027433.1|AVM00098.1|1549712_1551506_+|HNH-endonuclease
MSEGRRRVISDTQDEREIRSTSGNNASGEVSAVAVNGISYNNDSAAARGAGEGAVLDPAAFVATLSPAELLAVQTAAEQRLTAEATALVAAESDDGLLGLLDAREQTRRRAEVFDAALYIEISDRGVYRTAGHISVHQLYAYGARLGVGEAGRRRVTAEGIGAMGALTGERLEPHLAATATAAADGDAGGAHVAAVAEIMDKLPTAVTHDDRVKAEAMLADAARRLDPAAVTVVGNRILAWLDPDGTLADDHDRARRRTFNLQPQNRQLMSKVRALLTPVLRAKLEVILHQWATAGMNNPDDPDSPGGAADQPGLDSAVLAAAAERDTRMLGQRQHDALEALCDWALALAGQPAPTRIPSQTVVTVTDEDLARQAGIGWTATGTRIPVSDLVQFAADTVPYLAVFSKATGQILYMGRASRFATAAQRLALFARDRGCTAPGCTVPFIRTQAHHPSTACRRKLRHACSGPRMPDWTDDGQTDIDRLGVACGRHNRMNGTTPGHWESTVLTFGPDAGHVGWRPVGRGTRWQSNIMFHPERLAPERPAPDPGHGHPTAGAGPDDSGPPGDPGPCSPSSGTLQDATAAPKPARTTPGPHAA
>CP027433.1|AVM00099.1|1552049_1553408_-|MFS-transporter
MSVDTPPQKAPLPPATPTSMRRVAVASCIGTTIEYYDFFIYGTAAALVFPHIFFPALGATAGTVASFATFAVAFLARPLGAVVFGHYGDKLGRKGTLVTTLLMMGVATVAIGLLPTAATIGVLAPILLVVLRFVQGLAVGGEWAGANLLTAEYAPVGKRGYYAVFPQMGPALAFALSSTTFLLSDILLGEDVFMSYGWRIPFIASGALVIVGLYIRLNIQETPAFKAHQRTAAADAAAGVKKPLPFLEVMKLQPKEVLLSAGLMTFPFAFFYMGTAYLTAYGTKADGGGLDRQMVLAFGIGAAVILAATTLLGGVWSDRVGRRPVIIGASVAAFFWALALFPILDIGTPAAFGLGLAGTLAIFGLAFGPVGAYLPELFETRFRYTGAGAGYNLGGILGGAIPPLIAPGLAAAYGGFSIGVMLAALALISLLSTVALAGRTRMRADEAAVPLD
>CP027433.1|AVM00100.1|1553518_1554454_-|LysR-family-transcriptional-regulator
MPPPPRAPVDPRSIRADDLRYLLTVARARNRASAAAELGVDASTVTRRIRALERALGTRLLQQGAAGWSLTERGRAVAESAHPIEAAVERAVGAVAGGDQHLLRGNARVTAPDAFGACFVAPAMVRLRAAHPDLTVELLTATRELNLHQSGFDVAITLGVPANARLVSEPVSDYSLGLYAAQHYLAEHGTPETLDEIRSHPLIWYVDSLLQVGELDLDKHLPGVTPTLMSTNVFAQVAATRCGGGVGLLPAFVADRHGDLQRILPRAVDVRLTFSLAARRDRLASPTVLAIRDAVRAEVAGRRDELLPAVD
>CP027433.1|AVM00101.1|1554633_1555770_+|3-hydroxyisobutyryl-CoA-hydrolase
MPHSDRPRSDHAEAVVVAEESDGIGTLTLNRPAAINALNREMVAILTAVLDDWAVDPRVRAVVLDGAGTRGLCAGGDVVAIHRDAVALRGAGDEAAAASDSAAFWREEYRLNAAIADYPKPYVAIMDGIVMGGGVGVSAHAGVRVVTDRTRLAMPETGIGLVPDVGGTWLLSRVPGELGTYAALTATQLSGADVIALGLADHYVPAERLGALRAGLVAVSVDDALAAVAADPPESSLAQQREWIAEAFAADTVAEIEENCRALGTAESVAAAEALAAKSPTAAAATLAALRAAREDSSLRDALRREYRTSLRCLQHGDLAEGIRAQVIDKDRRPTWQQDDTRAVPADEVAAFTAPLPAGLELTFGPGTAATTLEETLR
>CP027433.1|AVM00102.1|1555766_1556549_+|enoyl-CoA-hydratase
MTASRYATITTETSGRVGVVRLDRPQALNALNSELMTEVVGAARAFDADPEIGAIVLTGSDRAFAAGADIKEMAALSCSDVLTQRFFAAWDRLAELRTPTIAAVNGYALGGGCELAMLCDIIIAGETAVFGQPEVDLGTIPGIGGSQRLTRAVGKAKAMDMILTGRRMKVDEAERLGLVARVVPAEQTVAVAIEVAAEIAGKSQIANALAKEAVNRAFEGGLAEGVRAERNLFYATFATEDRAEGMAAFVEKRPPNFVHR
>CP027433.1|AVM00103.1|1556611_1558147_+|methylmalonate-semialdehyde-dehydrogenase-(CoA-acylating)
MTQTIDHYIGGQRTTTIAGAPASSRRADVYNPSTGQVQAQVPLASAAEVGAAVEIAGRAQREWASWNPQRRGRVLMRFVDLVNENIEELATLLSLEHGKTLPDAKGDIQRGVEVIEFCIGAPHLLKGSYTEGAGSGIDVYDMRQPLGVVAGITPFNFPAMIPLWKAGPALACGNAFILKPSERDPSVPVRLAELFTEAGLPDGVFQVVHGDKEAVDALLTHPDVKAVGFVGSSDIADYIYSTAAAHGKRAQCFGGAKNHMIILPDADLDQAADALLGAGFGSAGERCMAISVAVPVGEQTAEALRGKLVEKVEALRVGHSLDPESDYGPLITAAARERVLGYIDAGEAAGAEVVVDGRHRGPARDSFDGESIEGGYYVGPTLFDHVTKDMTIYTDEIFGPVLCIVRAADYEEALALPNEHEYGNGVAVFTRDGDAARDFTSRVQAGMVGVNVPIPVPVAYYTFGGWKRSGFGDLNQHGTTAFQFYTKTKTVTSRWPSGVKDGAEFVIPTMD
>CP027433.1|AVM00104.1|1558153_1559326_+|acyl-CoA-dehydrogenase
MTEISGGTAGLDDDERVLVETAAAFAAKKLAPHALDWDAQRHFPVAELREAAELGMGAIYCRDDVGGSGLRRLDGVRIFEQLAYADPAVAAFLSIHNMCAWMVDAYGTPTQRAEWIPRLASMQTIASYCLTEPGAGSDAAALATRAERVGDEYVLNGVKQFISGAGASNLYVVMARTGGAGPKGISTFLVPADAPGLSFGAQEHKMGWHAQPTAQVIFDDVHVPRSALLGETEGIGFGIAMRGLNGGRINIAASSLGGAQAAFDKAAAYVASRKAFGGALIDEPTIRFTLADMATELQASRLMLATAARALDAGDPDVVEQCAMAKRFVTDACFAVADRALQLHGGYGYLTEYGIEKIVRDLRVHRILEGTNEIMRMVVGRSIATRYRDA
>CP027433.1|AVM00105.1|1559348_1560218_+|3-hydroxyisobutyrate-dehydrogenase
MKTIAFLGLGNMGGPMAANLAAAGHTVHGYDPMPAAREAAAETGVQVHDTASEAASGAAVIITMLPNGAVVHAVYDEVLPVAGAGTLLIDSSTISVDDARAAHTRAVEAGLTQVDAPVSGGVKGAVAGTLAFMVGGDTEAFDAARPVLEPMAGKIIHCGESGAGQAAKVCNNMLLAVQQIAVGEAFVLAERLGLSAQALYDVVTGATGNCWAIEVNCPVPGPAPESPANRGFTPGFATALMNKDLGLAMNAVASTGSRAPLGSEAARLYSDFAEQHGGQDFSAIIETLR
>CP027433.1|AVM00106.1|1560321_1561140_+|helix-turn-helix-transcriptional-regulator
MDGRHLDAALARLRNRTGVSVAFGGPVTAEGGLLLSRFSGPTAGVLSGLRVSLGEGLGGRVVALQRPGAVNDYFEARAITHRYDELIRAEGIRAVVASPVVVRRNPIAVIYGAYRGDEVVGDRVQDLVVAEAKALEQQIVAAETLSEARETWTHSDTESGVLRQQMREAHAKLREVMRLVDDGAVRDALEEIGSTLSHVSGDGPAADQSVLTPRESEVLTLAGLGYSNARIAESLGLTLHTVKSYMKSAMAKLNAHSRHEAVVAARRDRLII
>CP027433.1|AVM00107.1|1561339_1563040_+|AMP-dependent-synthetase
MTIQPREALAAARDRLIDLRTDYDTAVADFRWPDVGPQFNFAHDWFDPLARGNHAAALTIAEADGSRASYTYDELARRSDVLARDLADSGVGRGDSVIVMLGNQVELWETMLAVIKLGAVVMPTTTAVGPADLVDRLERGRARAVVCNAADAAKFDEVPGDYLRVAVGGGEGWSAYPDTAAVVVEPPAHPGNATDDPVLLYFTSGTTSRPKLVEHTHYSYPVGHLTTMYWLGLKPGDVHLNISSPGWAKHAWSNFFAPWLAQSCVFVLNYARFDAAQLLTVIRDEAVTSLCAPPTVWRMLIKSDLSGGAGSLREAISAGEPLNPEVISQVAQAWGLTIRDGFGQTEMTAVVGNTPGQRVEPGSMGRPLPGASVVLVDPVSGVRVDGVGEGEVCLDLSTPAPNLMTEYRDDAVRTQEAMHGGFFHTGDVALRDENGYLTYIGRMDDVFKSSDYKVSPFELESVLIEHPAVAEAAIVPAPDPLRLTVPKAYIVLAPGEEPSQEIAESILAFARDKLAPYQRVRRLEFFDLPKTISGKIRRVELRQRENEHADDRPAGEYRYEDFFARA

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Crispr_ID: CP027433_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027433_8

1893331-1893419

Orphan

Consensus_repeat	Method
CCGCTCGACCGTCGAGGGGCTTCGCTCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027433_8

>merge|CP027433|8|1893331-1893419|CRISPRCasFinder
CCGCTCGACCGTCGAGGGGCTTCGCTCGACCGTCGAGGGGCCCGCTCGACCGTCGGGGGCCCGCTCGACCGTCGGGGGCCCGCTCGACC

>CP027433|8|7|1893331-1893419|CRISPRCasFinder
CCGCTCGACCGTCGAGGGGCTTCGCTCGA	CCGTCGAGGGGCCCGCTCGACCGTCGGGGGC
CCGCTCGACCGTCGGGGGCCCGCTCGACC

Protein	Signature genes	Signature genes Name	Protein_function
CP027433.1\|AVM00317.1\|1880183_1880573_-\|TIGR02611-family-protein	unknown	unknown	gnl\|CDD\|370603
CP027433.1\|AVM00325.1\|1893478_1896064_-\|aminopeptidase-N	unknown	unknown	gnl\|CDD\|274121
CP027433.1\|AVM00327.1\|1896865_1897426_+\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM00329.1\|1898201_1899215_-\|peptidase-M48	unknown	unknown	gnl\|CDD\|320684
CP027433.1\|AVM02120.1\|1889431_1890118_+\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM00332.1\|1900643_1901603_+\|PE-PPE-domain-containing-protein	unknown	unknown	gnl\|CDD\|369775
CP027433.1\|AVM00334.1\|1902629_1903391_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237874
CP027433.1\|AVM00331.1\|1899722_1900544_+\|DNA-glycosylase	unknown	unknown	gnl\|CDD\|223344
CP027433.1\|AVM00326.1\|1896097_1896580_-\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM00322.1\|1891951_1892344_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381280
CP027433.1\|AVM00323.1\|1892532_1892781_+\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM00318.1\|1880889_1882563_+\|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl\|CDD\|236992
CP027433.1\|AVM00319.1\|1882756_1883395_+\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM00333.1\|1901715_1902432_-\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|341130
CP027433.1\|AVM00330.1\|1899238_1899709_+\|ribose-5-phosphate-isomerase	unknown	unknown	gnl\|CDD\|235509
CP027433.1\|AVM02119.1\|1888910_1889399_+\|thioesterase	unknown	unknown	gnl\|CDD\|223894
CP027433.1\|AVM00321.1\|1890289_1891927_-\|alpha-amylase	unknown	unknown	gnl\|CDD\|200471
CP027433.1\|AVM00328.1\|1897571_1898180_+\|disulfide-bond-formation-protein-DsbA	unknown	unknown	gnl\|CDD\|376526
CP027433.1\|AVM00324.1\|1892767_1893268_+\|DUF5130-domain-containing-protein	unknown	unknown	gnl\|CDD\|379937
CP027433.1\|AVM00320.1\|1884139_1888813_+\|NAD-glutamate-dehydrogenase	unknown	unknown	gnl\|CDD\|377452

Protein	Function_ID	Function_description	E-value
CP027433.1\|AVM00317.1\|1880183_1880573_-\|TIGR02611-family-protein	gnl\|CDD\|370603	pfam09656, PGPGW, Putative transmembrane protein (PGPGW). Proteins in this entry are putative Actinobacterial proteins of about 150 amino acids in length, with three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.	8.04551e-18
CP027433.1\|AVM00325.1\|1893478_1896064_-\|aminopeptidase-N	gnl\|CDD\|274121	TIGR02412, Aminopeptidase_N, aminopeptidase N, Streptomyces lividans type. This family is a subset of the members of the zinc metallopeptidase family M1 (pfam01433), with a single member characterized in Streptomyces lividans 66 and designated aminopeptidase N. The spectrum of activity may differ somewhat from the aminopeptidase N clade of E. coli and most other Proteobacteria, well separated phylogenetically within the M1 family. The M1 family also includes leukotriene A-4 hydrolase/aminopeptidase (with a bifunctional active site).	0
CP027433.1\|AVM00329.1\|1898201_1899215_-\|peptidase-M48	gnl\|CDD\|320684	cd07325, M48_Ste24p_like, M48 Ste24 endopeptidase-like, integral membrane metallopeptidase. This family contains peptidase M48 family Ste24p-like proteins that are as yet uncharacterized, but probably function as intracellular, membrane-associated zinc metalloproteases; they all contain the HEXXH Zn-binding motif, which is critical for Ste24p activity. They likely remove the C-terminal three residues of farnesylated proteins proteolytically and are possibly associated with the endoplasmic reticulum and golgi. Some members also contain ankyrin domains which occur in very diverse families of proteins and mediate protein-protein interactions.	8.7063e-53
CP027433.1\|AVM00331.1\|1899722_1900544_+\|DNA-glycosylase	gnl\|CDD\|223344	COG0266, Nei, Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair].	2.60582e-65
CP027433.1\|AVM00332.1\|1900643_1901603_+\|PE-PPE-domain-containing-protein	gnl\|CDD\|369775	pfam08237, PE-PPE, PE-PPE domain. This domain is found C terminal to the PE (pfam00934) and PPE (pfam00823) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands.	5.00945e-08
CP027433.1\|AVM00334.1\|1902629_1903391_+\|hypothetical-protein	gnl\|CDD\|237874	PRK14971, PRK14971, DNA polymerase III subunit gamma/tau.	2.38916e-06
CP027433.1\|AVM00322.1\|1891951_1892344_-\|hypothetical-protein	gnl\|CDD\|381280	cd14771, TrHb2_Mt-trHbO-like_O, Truncated hemoglobins, group 2 (O); Mycobacterium tuberculosis hemoglobin O like. The M- and S families exhibit the canonical secondary structure of hemoglobins, a 3-over-3 alpha-helical sandwich structure (3/3 Mb-fold), built by eight alpha-helical segments. Truncated hemoglobins (TrHbs, 2/2Hb, or 2/2 globins) or the T family globins adopt a 2-on-2 alpha-helical sandwich structure, resulting from extensive and complex modifications of the canonical 3-on-3 alpha-helical sandwich that are distributed throughout the whole protein molecule. TrHbs are classified into three main groups based on their structural properties and named after Mycobacterium sp. genes glbN, glbO, and glbP: TrHb1s (N), TrHb2s (O) and TrHb3s (P). This group includes a Mycobacterium tuberculosis TrHb2, Mt-trHbO, encoded by the Mycobacterium tuberculosis glbO gene, which is expressed throughout the Mycobacterium growth phase. It also includes a TrHb2 from the thermophilic Thermobifida fusca ( Tf-trHb) which has a high thermostability and at the optimal growth temperature for Thermobifida fusca (between 55 and 60 degrees C ), it is capable of efficient O2 binding and release. Tf-trHb shares a relatively slow rate of oxygen binding with Mt-trHbO.	3.96275e-62
CP027433.1\|AVM00320.1\|1884139_1888813_+\|NAD-glutamate-dehydrogenase	gnl\|CDD\|377452	pfam05088, Bac_GDH, Bacterial NAD-glutamate dehydrogenase. This family consists of several bacterial proteins which are closely related to NAD-glutamate dehydrogenase found in Streptomyces clavuligerus. Glutamate dehydrogenases (GDHs) are a broadly distributed group of enzymes that catalyze the reversible oxidative deamination of glutamate to ketoglutarate and ammonia.	0
CP027433.1\|AVM00330.1\|1899238_1899709_+\|ribose-5-phosphate-isomerase	gnl\|CDD\|235509	PRK05571, PRK05571, ribose-5-phosphate isomerase B; Provisional.	1.2449e-84
CP027433.1\|AVM00318.1\|1880889_1882563_+\|energy-dependent-translational-throttle-protein-EttA	gnl\|CDD\|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
CP027433.1\|AVM00333.1\|1901715_1902432_-\|L,D-transpeptidase	gnl\|CDD\|341130	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD. Members of the YkuD-like family of proteins are found in a range of bacteria. The best studied member Bacillus YkuD has been shown to act as an L,D-transpeptidase that gives rise to an alternative pathway for peptidoglycan cross-linking. Another member Helicobacter pylori Csd6 functions as an L,D-carboxypeptidase and regulates helical cell shape and motility. The conserved region contains a conserved histidine and cysteine, with the cysteine thought to be an active site residue.	3.41989e-30
CP027433.1\|AVM02119.1\|1888910_1889399_+\|thioesterase	gnl\|CDD\|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	8.75636e-17
CP027433.1\|AVM00328.1\|1897571_1898180_+\|disulfide-bond-formation-protein-DsbA	gnl\|CDD\|376526	pfam01323, DSBA, DSBA-like thioredoxin domain. This family contains a diverse set of proteins with a thioredoxin-like structure pfam00085. This family also includes 2-hydroxychromene-2-carboxylate (HCCA) isomerase enzymes catalyze one step in prokaryotic polyaromatic hydrocarbon (PAH) catabolic pathways. This family also contains members with functions other than HCCA isomerisation, such as Kappa family GSTs, whose similarity to HCCA isomerases was not previously recognized. Some members have been annotated as dioxygenases, dehydrogenases, or putative glycerol-3-phosphate transfer proteins, but are most likely HCCA isomerase enzymes.	1.3148e-11
CP027433.1\|AVM00324.1\|1892767_1893268_+\|DUF5130-domain-containing-protein	gnl\|CDD\|379937	pfam17174, DUF5130, Domain of unknown function (DUF5130).	3.13832e-59
CP027433.1\|AVM00321.1\|1890289_1891927_-\|alpha-amylase	gnl\|CDD\|200471	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Trehalose synthase (EC 5.4.99.16) catalyzes the isomerization of maltose to produce trehalulose. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0

>CP027433.1|AVM00324.1|1892767_1893268_+|DUF5130-domain-containing-protein
MASGDIAQQKAGVVDLIGAYNDEGLPLGAAVTASGRISAALFPGATFDTPPFRRDELIALDDALRDASNLAEVRFSVYIGDLSSDLEGDARQILARAPEPAYGTLIAVSPNTRDVVVVSGSEVAGRVNDRVAELGVTAAVSAFKQNQLIDGLVSALRVMATAVARP
>CP027433.1|AVM00323.1|1892532_1892781_+|hypothetical-protein
MEDWIVNVGMVVIVLTVISVAGCVISMLFSSGVRRPKIPEYTLDQKWTRSPALFSATEIEPMALPRHFEPADTEGGYASGKW
>CP027433.1|AVM00322.1|1891951_1892344_-|hypothetical-protein
MVDVSTFYDQVGGESTFRAIAERFYAEVAKDEVLVPMYPEADLTGAERRLRMFLEQYWGGPHTYSDERGHPRLRMRHVPYKIGPIERDAWLRCMEIAVASVPSDVLDDEHRARLLEYFQAAAHSLMNSPV
>CP027433.1|AVM00321.1|1890289_1891927_-|alpha-amylase
MSFDPTAPSGSPDQWWTNAVVYQIYPRSFSDLNGDGVGDLAGVIDKLGYLELLGVDAIWLSPIMRSPMADHGYDVSDPRDVDPVFGDLATFDELVAEAHDRDIRVTMDLVPNHTSNQHAWFSAALAAGPGSPERERYLFRPGRGEHGELPPNNWTSVFGGRAWSRIREPDGELGEWYLHLFAREQPDLNWENPEVMADLEQTMRFWLDRGVDGFRIDVAHGMAKAPGLPDMETPAVVLKHTDDDPRFNNDEVHEIHRRIRAVMDQYPGTANVGEVWVESSEEFGKYVRPDELHLGFNFRLATVPFDVDAVREAIDESLAATAAVGATPTWTLSNHDVPREVTRYTPPVPADYPDPEWAAENALGIGIARARAMALVELALPGTVFVYNGAELGLPDADLPDDALVDPVWERSGRTERGRDGCRVPIPWEGEEPPFGFSSSPDTWLPIPADWNRFTVETQLEDVYSTLSLYRQAIELRYARPEFSGDRVDWYGAPPGCLAFRRPGGLICALNGTTSPVPLPHGQILLLSLPLVDGMLAPNAAAWLV
>CP027433.1|AVM02120.1|1889431_1890118_+|hypothetical-protein
MRLASAGDRRDAAAFLARAARIDDSGVIRLKQRSDGAVGLWVRTGFDVLATRSVFGAVEPSDVVGDAGALAAALADAGDTPSPEPYSVGFALPAAWRGALPAFDGYLHLDDVPARELIALARKGAQVARDESGAHGPASSLLDQEVVEVTSEDAPDRRAGITMRAVFALTAMGFVRDAQGREISEDSPLDAIAAGEPVRVRSSAAWIRVDARYGSVYQRRAALGVSVL
>CP027433.1|AVM02119.1|1888910_1889399_+|thioesterase
MPQDGVVENRRLFEDAGHRTDDGYVVQVPVRWSDMDVFAHINHARMVTLLEEARIPWLFYEDKPTHAMRKGCLVADLHVKYQGQIRHDESPIAVTMFVERLRACDFTVGYEVRPYGAGADAKPAVVASTQLVSFDIDTQRPRRMTPDEKDYLRSFVRETTPA
>CP027433.1|AVM00320.1|1884139_1888813_+|NAD-glutamate-dehydrogenase
MTDQSTTGPSPEHLISGALLRYGGTGADRDRLARHLAVGELRPPGDYVVSVAKVGETLEVLVVAADAPLLVESVLTVVDGRGLTVAGIDHPIMPVVRDTAGRLLAIGDVYDDEVPGPVLDESWICVSVFASAPCTPEELSREVDRAVGLLAAVTRDAGTMRARLAGLADAAIAPEALRDEYRSLIEWIADGPNFHLVGYAPGDGGAGLGVWSDARTIRLQPLPAQSDTAAGGGGLPVIDRVYLETGILRTRYPLVLRFDDGAVEHQFVGTFTSIGLYQSVREIPVVRKKTSAVLKALSLEEDSYSGLAAIELLQTYPLFAVFATPAAELAQRVDALLAANLERSVRFFARLCHDGHTVGAMAFLPRDRYSTAVRERIIEFAERELGGGRSEFATRLSDGPLAQLQVMMRLRRTPDASELRVGSPMHERLERLLAEAVRSWEDDVRTLAGPDTVVSGLLPTVSTTYREERQPAAAALDLPIVAGLAVDDDVRVVLRASGGLPWTFTLYLAGRDAALTDILPMLASLGLTVLDEHPYRVDRADGLGVRIYEFTVTPAPHVTPSDPAGSEQRVAEAFRRMWSGEAAVDRLNELVLRAGLGAREVAILRTYTRYLQQCGFGNSVAHFAEVLGGYPDVTRALIGLFGATFDPAVEPDVRPRLIDDAAAELDGELAGVISLDADRVLAALARSIRATLRTNYFRCDDPESAAVDGEFAPTLAVKLATRDLPLAPAPRPEYEIFVHSPRVEGVHLRFGGVARGGCRWSDRREDFRTEILGLVKAQAVKNAVIVPAGAKGGFVVRRPPAPTGDAAADQAAYRAEGVECYRAYVSALIQLTDNLDHETGAVIAPTAVVRRDPDDPYLVMAADKGTASFSDIANAIAHHYRFWLGDAFASGGSVGYDHKAMGITARGAWEAVKRHFAERGIDCQREEFTAVGVGDMSGDVFGNGMLLSRCTRLVAAFDHRHIFVDPEPDAEVSYAERERLFALPRSSWADYRTGLISAGGGVWSREVKSIPVSPQMRVALGLDEGVTALAPPDLIRAILLAPVDLLFNGGIGTYIKASGEADSDVGDKANDAVRVTADRLRVKVVGEGGNLGVTERGRVEADLHGVAINTDALDNSAGVDCSDHEVNIKILLDSQISAGALPADERTSLLESMTDEVADLVLADNISQNAAIGAARRTADDEADLYARLLSQLADNGVDLQLEVLPAPEALLERRASPLARGLTSPELCTVMAHVKLGAKAELIESRLLDGDAFDEVVLSYFPAPLRARFADGIEGHRLRREIAATCLVNQIVDDGGITFLFRTAEATTATIEEAARAYAATTAVFDFTGQVVRLRRARLTASLLDDMTQYERTLLSRASRWFLEHRPQPLAAAAEVRRYADVVRLTPMIDAWARPTIARSIDAAAADFVERGADPELARSVARAPYRLHLLDVADVAEIADRGAEEIGDLAFAVLEHFAIDELLDAVAALERIDRWHLLARLALRDDLHSLVRALTLAILQLSEPEDGAEAKIADWESSRSTTLARVRGTVRGVLETPDPGVAGLTVAVRALRSVV
>CP027433.1|AVM00319.1|1882756_1883395_+|hypothetical-protein
MVGKADGTKVGKTKKKRKHFKHTRPKVFAASLIGGLAITGFMGYGMVRGDVPVQMSVTGENFVASLSKLEGSEVAVYPRSLQTVNNGKVETVVVTMGSATLHDLCLAMSAPNLPGIGTVWMVIKAPGAATQATNMMMDVDGLDASLTLEKAVIGSAQPARDSDSSELATAIAAPTAVIVDVGANVQAMRASKLTVDGAKVSLTRDAGACGGN
>CP027433.1|AVM00318.1|1880889_1882563_+|energy-dependent-translational-throttle-protein-EttA
MAEFIYTMKKVRKAHGDKVILDDVTMSFYPGAKIGVVGPNGAGKSSILKIMAGLDQPSNGDAFLDPDATVGILLQEPPLNEDKTVKENVLEGMGEIAEKLARYNEIAELMATDYSDELMEEMGKLQEDLDNADAWDLDSQIEQAMDALRCPPGDSPVTHLSGGERRRVALCKLLLSKPDLLLLDEPTNHLDAESVLWLEQFLAGYPGAVLAVTHDRYFLDHVAQWICEVDRGKLHPYEGNYSTYLEKKAERLEVQGKKDQKLQKRLKEELAWVRSGAKARQTKNKARLARYDEMAAEAEKHRKLDFEEIQIPTPPRLGNVVVEVENLEKGFDGRVLIKDLSFTLPRNGIVGVIGPNGVGKSTLFKTIVGLEQPDAGTVKIGETVKLSYVDQDRANIDPKKSVWQVVSDGLDYIEVGQNEMPSRAYLSAFGFKGSDQQKPSEVLSGGERNRLNLALTLKEGGNLILLDEPTNDLDVETLGSLENALEQFPGCAVVISHDRWFLDRTCTHILAWEGNVEEGQWFWFEGNFEAYEANKVERLGAEAARPHRVTHRKLTRD
>CP027433.1|AVM00317.1|1880183_1880573_-|TIGR02611-family-protein
MRLRIKIWHRRNRYAIRQHPALNQIYRFAVGVVGTVMMLAGLVMIPLPIPGPGWVTLFLGLAVLSTEFAWAHRVTTFLRRQLQNAGVLSARVTAAVRDFARHNHAYHRHTMLAHARTAYTRITPLPAAA
>CP027433.1|AVM00325.1|1893478_1896064_-|aminopeptidase-N
MTAPNLTRSAAQQRAALIDVQNYRIDLDLTDGAGGPGETTFRSRTEVRFTATPGAESFIELVAPNLISATLNGAELDVTSFDESVGLPLTGLAEQNVLSVVADCAYSNTGEGLHRFVDPADGAVYLYSQFETADAKRMFACFDQPDLKATYSISVLAPSDWEVISNGAVAETETIGDAKRVGFATTEVMSTYLVALIAGPYATWTDEYTDEHGVIPLGLYCRASLAEFMDADRLFTETKQGFGFYHRTFGIPYPFGKYDQLFVPEFNAGAMENAGAVTFLEDYVFRSRVTRYLYERRAETVLHEMAHMWFGDLVTMQWWDDLWLNESFATFASVLSQVEATEYTNAWTTFANVEKSWAYRQDQLPSTHPIAADIPDIAAVEVNFDGITYAKGASVLKQLVAYVGLEPFLTGLREYFAEHRFGNATFADLVGALERASGRDLSGWGAQWLKTTGINALHPDFQLDDQGRFTDFAVVQGGAEPGAGEIRVHRMRIGIYDDEDGRLVRTHSVEIDVDGPRTEVPELIGVPRGALILLNDDDLTYASVRLDPVSLATATARIGDIADPLPRTLVWSAAWEMTRQAEMRARDFVALVSAGIGAETEVGVVQRVLLQAATALESYAEPGWAADTGRTEFAARLLTLARAAEAGSDHQLAFVTALLGGVVNDDQIAGLRALLDGADPASVGLPGLTVDAELRWKLVKALAAAGAIDPDAEATPVIDAEAERDNTAAGARHAAAARAARPLAAAKTGAWATAFDDDAVANVTVRSMVEGIARPGQYELLAPFTAEYFGKVGELWRRRSSEVAQTVVVGLYPSWEISEDGLAAADAFLASGDVPPALARLISEGRAGVERALRARAFDAR
>CP027433.1|AVM00326.1|1896097_1896580_-|hypothetical-protein
MKTRKALTAVIATAAVASAITATTVLAAPASAVPFPVTQIPASGVQVSGLVVPAPLFVGITADSTSRRGWTAFTAPASPAVCSSSAAGMLVDVDYVNTATGHRGHVRMKPCPHFRDPAQFRPVAFTGSGQILFTTAIRGSWAYPNAGQPSIPGGGAFVAH
>CP027433.1|AVM00327.1|1896865_1897426_+|hypothetical-protein
MLAAAVVALLVVPVGTAGATPAHAVDLGPVQVELVDGAIALSVTSGAVKQVGNELELTNARGVVKNRIPLSVTTSDRKTYPLRANVAADGKSVHLSPAALPKRPLPKPKNKEQAYNQMMKLWNQNAACVGPAAAVGALIGLFFIVGWIVGGLIGAYVGLENCGRGVWGDRYRGETVRAFWKWWNWG
>CP027433.1|AVM00328.1|1897571_1898180_+|disulfide-bond-formation-protein-DsbA
MAERDRVDFWFDPLCPWCWITSRWILEAERVRPIEVNFHIMSLAVLNENRDIPDSYREMLARAMEPVRVLAATQARHGDAAVAELYTAMGTRRHNEGEQDMSAVIAQALADAGLEADLADAATTTEYDDAVRTSHHEGMDKVGDDVGTPTIHVNDVAFFGPVLSRIPRGEEAGRVWDGVVALASYPHFFELKRTRTEDPEFG
>CP027433.1|AVM00329.1|1898201_1899215_-|peptidase-M48
MDSHAPIPSVPGVFDPLVAEPPVHQPGPDAVWRPPAPYSGPPRLHPWEIPLLVLLVLLTLLGYAAILLLVSNGMISDYFLALLAMPLIIFLARGLLFAQQRVNGVQMTPTQFPEGYRMMVDAAARYGLHYVPDGFVVSGNGAVNAFASGHGFRRYIVVYSDLFEVGGRARSPEALEFVIGHEVGHIAAGHTSYWRQLLTGTLMSVPILGTTLSRAQEYSADNYGYYTRPSGAPGAIGLLSAGKYMLSAVDFDQFADRATREKGFFVTLVNLFSTHPVLTWRAAALRDRSRSGSLFRRPTAIKRGVGSGHAVPIAPPPAPTDLPPGALPNGLNPPPKF
>CP027433.1|AVM00330.1|1899238_1899709_+|ribose-5-phosphate-isomerase
MRIYLGADHAGFERKNEIADHLRAAGHEVVDCGAHEYDALDDYPPFCIEAAERVVADPGSLGIVLGGSGNGEQIAANKVKGARCALAWSVETAQLAREHNNAQLIGLGGRMHSKEEALAIVDAFVSTAWSEEPRHQRRIDLLADYERTGENHLPQA
>CP027433.1|AVM00331.1|1899722_1900544_+|DNA-glycosylase
MPEGHALHRLARRQQKQFGGQRVAVSSPQGRFGPEAALLDGLVFQSAEAWGKHLVYRFGASSLPDGDRSCRLVHIHLGIYGAFTEEPLPMPEPTGQVRLRMVGDDLGVDLRGPNSCELYTPADLDALVARLGPDPLRGDAEPDHARARIARSRRAIGSLLMDQKVIAGVGNIYRAEVLFRAGIDPMRPGTTLTRDEFDTIWADLAELMPIGMATGRIHVVRPEDDHGAPAYAPNRPRTYVYRRAGEPCRLCGTTILWRELEGRNLFWCPACQS
>CP027433.1|AVM00332.1|1900643_1901603_+|PE-PPE-domain-containing-protein
MESDRSGHRVPGAGVEAHRRSGRPVLGPLVLAVGGTGESTPGDDPASVTGMLARVTDELDERFSARWVPYPASYGPAASLDGECYLSSVARGVTALAQAIDDAVAEQPDRPVMLIGYSQGAVVIRSLLARPATGRYAASVAGLGFVADPHQPPGAVPGCDGWGVAGRGPDLPAEIPAFWVGAPDDVICNASPDSLIRDVADLSGMFSVDQVRTWLADVYTRVRDAELQNAARTRLAPSQWIRDVRRLAIAAREVRGYLPSSLRVHRWRWDNPLGGRHVSYGTEPYLRAPLTAPDVTGCQVLAQWMQVQATLGPHQRCAA
>CP027433.1|AVM00333.1|1901715_1902432_-|L,D-transpeptidase
MKLNKGFSTVFSAKPSGRRQSRTARLVAVAVSAAALSLTVPAVATAEPVTVIPGLPPVELPQIPGAPSPEKSKPKPKATPPAEPGVPAMPNVSTPTGYVALAVDQDHTIYWWKDGRFVRKMPISMGSDRHPTPNGIYRTMEKYRDMYMDSSTYGVPIDSPDGYRTYVEYATRMSNSGIFIHAAPWSVNQQGNTNVSHGCINVSTENGKWVYDNVGRGTPIVVKGTVGGGNAQTSRVGS
>CP027433.1|AVM00334.1|1902629_1903391_+|hypothetical-protein
MSEKGKGTVSAPTVVVSALAATVVSAVIVGIGALGISLIDRTAAGQEPSTVVNLGTQQPYGANPPAAPAAPAALESAPADAPVDLPPALAPAAPAATPDAQPAAPTTASPGAPTTRRSPQSIREAKASDLTVTAERPTKVDLEWQYAAFWNPRIPTAAKMAVVYNGNDPKARKEINQVMASSQTYDFFSMRGAAAGPPRISGNRMSITFRGTMAGFPVMQVNYYYLRDGGQWKLDFKRICASIACNGNPDFGY

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Crispr_ID: CP027433_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027433_11

2830695-2830777

Orphan

Consensus_repeat	Method
GTGCCGGGCACCCACGTTTCGCT	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of CP027433_11

>merge|CP027433|11|2830695-2830777|CRISPRCasFinder
GTGCCGGGCACCCACGTTTCGCTCTGGCACCCTCGACTGAGGGTGCACAACGAAATCACGGTGCCGGGCACCCACGTTTCGGT

>CP027433|11|10|2830695-2830777|CRISPRCasFinder
GTGCCGGGCACCCACGTTTCGCT	CTGGCACCCTCGACTGAGGGTGCACAACGAAATCACG
GTGCCGGGCACCCACGTTTCGGT

Protein	Signature genes	Signature genes Name	Protein_function
CP027433.1\|AVM01027.1\|2825477_2825903_-\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM01022.1\|2820971_2821550_-\|hydrolase	unknown	unknown	gnl\|CDD\|366353
CP027433.1\|AVM01029.1\|2826823_2827756_+\|cytochrome-C	unknown	unknown	gnl\|CDD\|224921
CP027433.1\|AVM01026.1\|2824403_2825468_-\|anthranilate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234682
CP027433.1\|AVM01030.1\|2827752_2828901_+\|menaquinol-cytochrome-C-reductase	unknown	unknown	gnl\|CDD\|223795
CP027433.1\|AVM01036.1\|2836396_2836750_-\|iron-sulfur-cluster-insertion-protein-ErpA	unknown	unknown	gnl\|CDD\|272875
CP027433.1\|AVM01023.1\|2821861_2822128_-\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM01028.1\|2826150_2826762_+\|cytochrome-B	unknown	unknown	gnl\|CDD\|224758
CP027433.1\|AVM01024.1\|2822345_2824124_+\|DEDD-exnuclease-domain-containing-protein	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|236123
CP027433.1\|AVM01038.1\|2838028_2838724_+\|DUF3043-domain-containing-protein	unknown	unknown	gnl\|CDD\|378611
CP027433.1\|AVM01035.1\|2835347_2836319_-\|carbohydrate-kinase-family-protein	unknown	unknown	gnl\|CDD\|238917
CP027433.1\|AVM01037.1\|2836844_2837963_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376844
CP027433.1\|AVM01040.1\|2840604_2841402_+\|adenosylcobinamide-GDP-ribazoletransferase	unknown	unknown	gnl\|CDD\|234697
CP027433.1\|AVM01039.1\|2838730_2840608_+\|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234636
CP027433.1\|AVM01041.1\|2841441_2842542_-\|branched-chain-amino-acid-aminotransferase	unknown	unknown	gnl\|CDD\|237363
CP027433.1\|AVM01032.1\|2831384_2831801_-\|cytochrome-C-oxidase-subunit-IV	unknown	unknown	gnl\|CDD\|378833
CP027433.1\|AVM01034.1\|2833284_2835210_+\|asparagine-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|223444
CP027433.1\|AVM01031.1\|2828897_2830520_+\|cytochrome-b	unknown	unknown	gnl\|CDD\|224209
CP027433.1\|AVM01033.1\|2831804_2832974_-\|cytochrome-C-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|224537
CP027433.1\|AVM01025.1\|2824120_2824399_+\|AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366431

Protein	Function_ID	Function_description	E-value
CP027433.1\|AVM01025.1\|2824120_2824399_+\|AsnC-family-transcriptional-regulator	gnl\|CDD\|366431	pfam01037, AsnC_trans_reg, Lrp/AsnC ligand binding domain. The l-leucine-responsive regulatory protein (Lrp/AsnC) family is a family of similar bacterial transcription regulatory proteins. The family is named after two E. coli proteins involved in regulating amino acid metabolism. This entry corresponds to the usually C-terminal regulatory ligand binding domain. Structurally this domain has a dimeric alpha/beta barrel fold.	7.82231e-16
CP027433.1\|AVM01022.1\|2820971_2821550_-\|hydrolase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	6.91853e-27
CP027433.1\|AVM01026.1\|2824403_2825468_-\|anthranilate-phosphoribosyltransferase	gnl\|CDD\|234682	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional.	2.50771e-162
CP027433.1\|AVM01029.1\|2826823_2827756_+\|cytochrome-C	gnl\|CDD\|224921	COG2010, CccA, Cytochrome c, mono- and diheme variants [Energy production and conversion].	1.12894e-14
CP027433.1\|AVM01030.1\|2827752_2828901_+\|menaquinol-cytochrome-C-reductase	gnl\|CDD\|223795	COG0723, QcrA, Rieske Fe-S protein [Energy production and conversion].	3.73961e-23
CP027433.1\|AVM01036.1\|2836396_2836750_-\|iron-sulfur-cluster-insertion-protein-ErpA	gnl\|CDD\|272875	TIGR00049, Uncharacterized_protein_in_nifU_5'region, Iron-sulfur cluster assembly accessory protein. Proteins in this subfamily appear to be associated with the process of FeS-cluster assembly. The HesB proteins are associated with the nif gene cluster and the Rhizobium gene IscN has been shown to be required for nitrogen fixation. Nitrogenase includes multiple FeS clusters and many genes for their assembly. The E. coli SufA protein is associated with SufS, a NifS homolog and SufD which are involved in the FeS cluster assembly of the FhnF protein. The Azotobacter protein IscA (homologs of which are also found in E.coli) is associated which IscS, another NifS homolog and IscU, a nifU homolog as well as other factors consistent with a role in FeS cluster chemistry. A homolog from Geobacter contains a selenocysteine in place of an otherwise invariant cysteine, further suggesting a role in redox chemistry. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	6.92138e-50
CP027433.1\|AVM01039.1\|2838730_2840608_+\|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase	gnl\|CDD\|234636	PRK00105, cobT, nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Reviewed.	3.10901e-158
CP027433.1\|AVM01028.1\|2826150_2826762_+\|cytochrome-B	gnl\|CDD\|224758	COG1845, CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Energy production and conversion].	5.1709e-56
CP027433.1\|AVM01024.1\|2822345_2824124_+\|DEDD-exnuclease-domain-containing-protein	gnl\|CDD\|236123	PRK07883, PRK07883, DEDD exonuclease domain-containing protein.	0
CP027433.1\|AVM01038.1\|2838028_2838724_+\|DUF3043-domain-containing-protein	gnl\|CDD\|378611	pfam11241, DUF3043, Protein of unknown function (DUF3043). Some members in this family of proteins with unknown function are annotated as membrane proteins. This cannot be confirmed.	5.72647e-67
CP027433.1\|AVM01035.1\|2835347_2836319_-\|carbohydrate-kinase-family-protein	gnl\|CDD\|238917	cd01942, ribokinase_group_A, Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.	3.74672e-74
CP027433.1\|AVM01037.1\|2836844_2837963_-\|hypothetical-protein	gnl\|CDD\|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	5.83505e-121
CP027433.1\|AVM01040.1\|2840604_2841402_+\|adenosylcobinamide-GDP-ribazoletransferase	gnl\|CDD\|234697	PRK00235, cobS, cobalamin synthase; Reviewed.	4.86106e-50
CP027433.1\|AVM01041.1\|2841441_2842542_-\|branched-chain-amino-acid-aminotransferase	gnl\|CDD\|237363	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional.	0
CP027433.1\|AVM01032.1\|2831384_2831801_-\|cytochrome-C-oxidase-subunit-IV	gnl\|CDD\|378833	pfam12270, Cyt_c_ox_IV, Cytochrome c oxidase subunit IV. This family of proteins is found in bacteria. Proteins in this family are approximately 140 amino acids in length. This family is the fourth subunit of the cytochrome c oxidase complex. This subunit does not have a catalytic capacity but instead, is required for assembly and/or stability of the complex.	1.39505e-48
CP027433.1\|AVM01034.1\|2833284_2835210_+\|asparagine-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|223444	COG0367, AsnB, Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism].	4.87112e-169
CP027433.1\|AVM01031.1\|2828897_2830520_+\|cytochrome-b	gnl\|CDD\|224209	COG1290, QcrB, Cytochrome b subunit of the bc complex [Energy production and conversion].	3.1507e-72
CP027433.1\|AVM01033.1\|2831804_2832974_-\|cytochrome-C-oxidase-subunit-II	gnl\|CDD\|224537	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion].	1.05071e-28

>CP027433.1|AVM01031.1|2828897_2830520_+|cytochrome-b
MTVADRLATQAHEADVRYRMAAGMRRQINKVFPTHWSFLLGELALYSFIILLLSGVYLTMFFDPSMAHVTYEGAYQPLNGVTMSRAYETTLDISFEVRGGLFVRQVHHWAALLFAASIIVHMMRIFFTGAFRKPREANWVIGCFLLLLAMFEGFFGYSLPDDLLSGTGVRAAMSGIVLGIPLIGTWLQFALFDGDFPGMIIIPRLYVLHVLIFPAIILALIGAHLALVWYQKHTQFPGPGRTENNVVGVRILPVFAAKGGAFFAITFGAIALMSGIFQINAVWNIGPYNPAQVSAGSQPDIYMMWTDGFARLMPAWELYLGNYTIPAIFWVVAVIGVVFTLLFAYPWIESALTGDKEPHNLLQRPRDAPVRTAVGAMALTFYIILTISCMNDVIAYKFHISLNATTWMGRIGLIVLPPLVYFIAYRWAISLQRSDRDVLAHGIESGIIRREAIGEYIEIHQPLGPVDSHGHPIPLPYEGAALPKRMNKLGFAGNHGTGSALTPDPADQQELNVKIAHDQHEVEKDALLELQARGGKAHED
>CP027433.1|AVM01030.1|2827752_2828901_+|menaquinol-cytochrome-C-reductase
MSATSKDAPTGDQLDAMSRDELVKLGTNLDDVDIIYREPRYPVEGTKAEKRSERIVAVWFILSGLLALAGFALFVWNHWEFVMPDEPGYWAYTFYTPALGVTFGLAILFFGFGVIQITKRFIPQEISVQQRHDGPSEKVDQKTIGAELADSLETSTLPRRKMIIGSAIFGLGSLAFAGGIAAIGGFIKNPWANPKDDLWQTGWSPIHDVTPNETVFLRRDTGNPYQVALVRPEDLDAGAMETVFPWRVSDGYGETEESRHKLLKSLRAVRNPVMLIRLRPADAAKVIKRQGQESFNYGDYYAYTKVCSHLGCPTSLYEQQTQRILCPCHQSQFDALEYGKAVFGPAARALAQLPIAVNNQGYMVANGDFIEPVGPAFWERKS
>CP027433.1|AVM01029.1|2826823_2827756_+|cytochrome-C
MRSSPPSSSQPLGDDASTERVPSSGKSEARRAKSRRKLRRRAGATAFLMFGLIAAGLLAGLLTPKPQVATADANAAQLVEAGKQLYETSCVTCHGQNLEGVPDRGPTLLGVGDASVYFQVSTGRMPAARGEAQAARKTEKFTQVQIDQLGAYIQAMGGGPRVMYERDDNGEIKRNPETGLPVLAQESLQGDNLGRGGELFRLNCASCHNFTGRGGALSSGKYAPTLSGVNEQQLYTAMLTGPQNMPKFSNRQLSAEEKKDIIGFVRYVDSANPSGGLALGGFGPVSEGIVMWFVGVTAIIAGAMWIGSRN
>CP027433.1|AVM01028.1|2826150_2826762_+|cytochrome-B
MTSAVGTPGTAITSRVHSLNRPNMVSVGTIVWLSSELMFFAGLFAMYFVARANTVTDWPQPPAHLNLALAIPVTLVLIASSVTCQLGVFAAEKGDVFGLRRWYTITLLMGLFFVCGQAYEYVVLYGEGVTLSSSSYGSVFFMATGFHGLHVIGGLVAFVLLLIRTRLSKFTPAQATAAIVVSYYWHFVDIVWIALFVVIYFVQ
>CP027433.1|AVM01027.1|2825477_2825903_-|hypothetical-protein
MARWWRRRTRAPRDAAAELIRARVLVECHDEAAAVSSVLASAGYGRNDDVLLRHLVFVPDRHAAAFAARLRPDGYVPAPLLATDPSPPAGLVPVALGRVQAVDAQSVSRERALVGSMTARMGGVVGGWAVLEAADVEPTSG
>CP027433.1|AVM01026.1|2824403_2825468_-|anthranilate-phosphoribosyltransferase
MTNPNASFSWPAVLGKVTDGVDLTTDEAAWAMREIMSDSATGAQIAAFGVGVKMKGAAPSELRGLADSMLAFANRVDTAVEAVDIVGTGGDRSHTVNISTMTSIVVAAAGVPVIKHGNRAASSKSGGADVLEALGVAISLGPEAVARCLDEVGIGFCFAPVFHPAFRFTGPPRKEIGIPTVFNVLGPLTNPAAPPAGLIGCAFADLAPVLAQTFADRGNRALVVRGDDGLDELTTTSTSTVWQVYGGRVRELAVDPADLGIGLVELAALQGGDALVNAQVARDLFAGSTGPVRDAVTLNAAAALVAFEQDRLYSQDEFVAALRAAMRRVEEVLDSGAAAARLAQWARLSSELAG
>CP027433.1|AVM01025.1|2824120_2824399_+|AsnC-family-transcriptional-regulator
MITAIVLIGADVHQIPETAQAVADIPGVTEVYSCAGDVDLIAKVRVRDHEEIAEVVTGRINRIPGVRTSATHIAFRSYASAEVEGGFSIGEE
>CP027433.1|AVM01024.1|2822345_2824124_+|DEDD-exnuclease-domain-containing-protein
MSQLSFADLPDDEEFATASLLHTTLVVIDLETTGGSAERDAITEIGAVKIRGGEVVGEFATLVDPGRAIPPQIVSLTGITSAMVHDAPPIEEVLPAFFEFARGTILVAHNARFDIGFLKRAAARQHLPWPFPATLCTVVMARRILSRDEAPTVKLSALADLFDVSVKPTHRALDDARATVDVFHRLLERVGNQGVHTYRDLTRYLPRVSPAIRAKRALAAGLPHRPGVYLFRGPGEEVLYIGTAVDLARRVGSYFSGDPRPRMAEMVGLTQRVDHIECAHGLEAGVRELTLLGAHKPSFNRRSRNPQRGWWITLTAERFPRLKVSRSPGEVAVGPIAQRGAAADIADVIAGAAGLRTCTAGLTSADHHFCIGTAGAATLPDPLVAAMPGACRAASDRPQTVPDYLPRVRAAHDLVLGFDDELLDRLTARLEQLARSRRFESAARARDRLAATIDALARCQRLAAIARLPELVLARPGTAGGWEFAVVRFGRLAGAGCAPPGAAPMPVVEAVVAGARTVPAPATGDGPLSGAPPEEVGLIARWIDEPGTRLVSVDGELSCPVGSAQRRREFSRAARQARELAPNRTGSFRLGA
>CP027433.1|AVM01023.1|2821861_2822128_-|hypothetical-protein
MRIDCATCPGRGRACDGCLMQVFFAPATRGFDPGEDPEGAVRDLHDAVDVLAATALISPTVANAARRDIDAGGGPARSAGRGFLRAVG
>CP027433.1|AVM01022.1|2820971_2821550_-|hydrolase
MGKHRMEQPRAAVKAAKTAVIAGSIAVGSLALAAGPADAAPISIPGVGDFEVPGVNENQIPPQFKQGNNNGGLINSQPARAQKALRAAESKIGSPYSYGAAGPNAFDCSGLVHWAYKQAGKTIPRDSYGQLGGGKRVASLADAKPGDVLIFNGGGHAGIYAGNGIFVHSSTYGVPVKRDKVKAWQLTGIRRY
>CP027433.1|AVM01032.1|2831384_2831801_-|cytochrome-C-oxidase-subunit-IV
MKIEARIFEAIAVFFLVMGVIYTVSTHFYYTGIEWAGAMCLYFSAALSILAGSYFRFVARRVEIRPEDYEEAEIEDGAGELGFFSPHSWWPIMVAIGASLFAIGFATGNFWFAIGAAVMILASASGLVMEYYVGPEKH
>CP027433.1|AVM01033.1|2831804_2832974_-|cytochrome-C-oxidase-subunit-II
MKLTHGGRSSARRNSGASRTVKRLGALGALALAALVTSGCSPEEAVRFGWPSGITPPAKEMLHLWQWACIAALIMGVFVWGLIFWTITFHRRKGNKDATATDPAEELPRQTGYNVPLELAYTAVPFVMIAVLFYFTVMVQTNVERKEPNPPVVVDVTAFQWNWKFGYNTVRLADGTELVTPADAKKGSPFDLQDPEYYEHDGHEVELPGPAGGKDADVRDYLTFDKIETLGTSSEIPILVLPTDTRIQFDLASADVVHSFWVPEFLYKRDVMPFPKENHQDPSFQIEKIERPGAFVGRCAEMCGTYHAMMNFEVRAVSPEVFEAYIKYRLANPEKNNAEALSAVCQQPQSVVTVPFDTRRVATTDTPEYLGDANDTTIPNCTLPQSQEN
>CP027433.1|AVM01034.1|2833284_2835210_+|asparagine-synthase-(glutamine-hydrolyzing)
MCGLLGMLTRDGSASSIVDLIAEASHCMRHRGPDDALTWHDDDLALGFNRLSIIDIEHSPQPLLWGPPEQPDRYALAFNGEIYNYLELRAELEETFGAKFHTGGDGEPIVVGFHHWGPAVLTKLRGMFAFAIWDTVTESLFLARDPFGIKPLYLATGPGGTAFGSEKKSLLELLGALGLDATLDARAIEHYTVLQYVPEPESLHANIRRLESGTYARLTPGTDPVVTRYFTPRFQVRPFARDDDQARYDEIADALRDSVAKHMRADVTVGSFLSGGIDSTAIAALAIQHNPDLITFTTGFEREGYSEVDVAAESAEAIGARHIVKVVSPAEFIEALPKIIWYLDDPVADPALVPLYFVAAEARKHVKVVLSGEGADELFGGYTIYREPLSLKPFDKLTPGLRRLAGRVSEKIPEGKRGKSLLHRGSLTLEERYYGNARSFDDERLRRVLREFRPEWMHTDVTAPIYAESRGMDPVARMQHLDLFTWLRGDILVKADKMTMANSLELRVPFLDKEVFAVAEGLPFDQKLAHGTTKYALRRALEQIVPAHVLHRKKLGFPVPLRHWLAGTEMYEWARAVITASDTDEIFDKRFVLQMLDEHRAGVVDNSRRIWTVLCLMIWYGIFVDGTIDPKIEERDYPVVV
>CP027433.1|AVM01035.1|2835347_2836319_-|carbohydrate-kinase-family-protein
MFIAVCGSLATDHLMKFPGKFSEQLLGDQLEHLSLSFLTEDLIVRRGGVGGNIAFAIGALGGAPLLIGAAGEDFAEYREWLTDHGVDCRGVRISRTQHTARFMCTTDTAMAQVAFFYPGAMSEAREIDVTEVFDETGRPDLVLIAPDDPDAMVRHTELCRDHRIPFAADPSQQLARLDGETARGLIDGAKYLFTNEYEWGLLRKKTGLSESDVAEMVGVRITTRGSDGIDIVPSDGDAIHVPVVPVREAQDPTGVGDGFRAGFLSGLARGLRFERAAQLGAMIATLVLECDSTQGWTCDDREAIARIRDAYGEAAAADIHAVL
>CP027433.1|AVM01036.1|2836396_2836750_-|iron-sulfur-cluster-insertion-protein-ErpA
MTTVQNETAQSGVVLTDSAAAKAKALLDQEGRDDMALRIEVQPGGCAGLRYQLYFDDRTLDGDIVTEFGGVKLAVDRMSAPYMKGATIDFVDSIEKQGFTIDNPNATGSCACGDSFN
>CP027433.1|AVM01037.1|2836844_2837963_-|hypothetical-protein
MTDGELGAAGTGRSRGCRVVVMPDSFGGTLDAAAAAAAIGAGWQTGRPHDTVVLAPQSDGGPGFVEVLAASLGGEHRNLTVEGPLGDPVGASWLRRDATAYVEAAQACGLPLLPEPPDPHSAWSASTAGVGELISAAVAAGCRRIVVGLGGSATTDGGRGAAARLGGLAAARRLLRDVDLVAATDVDNPLLGPGGAAAVFGPQKGADAATVARLEERLAGWADHLEATAGHDLRDEPGAGAAGGLGAFLLACGGRRTSGAQLVAAETHRRDQIAAADLVITGEGRLDAQTLCGKLVAVVAEEAAAAAVPVLVLVGQTLLTAADSAAVGEVHSLVHHAGSLAAAMTDAGPQLTGLAARLAARWAGPGGVALGE
>CP027433.1|AVM01038.1|2838028_2838724_+|DUF3043-domain-containing-protein
MKLPWKSGADAGDATADETTADTSASSAASTDDGAPAKKGAGATTPGKGRPTPKRREAQARRTGPVAPPPTTRAEARARRKAQKATLTKEERKQLRAERTRARTEQREKMMSGDERYMIARDRGPVRAYVRDLVDSRRNFAGLFMPFAVLLIVAMMVPNFAVYINLVMLLFVVFMVIDSVILGRMVNKRVRERFPESTDTGFKLGLYAFTRAMQLRMMRAPRPRVSVGDEV
>CP027433.1|AVM01039.1|2838730_2840608_+|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase
MRTLVLGGTRSGKSARAERLLADRPAVRYLATGAPPDPADLGWARRVQTHRDRRDDRYVVVETLDLAAQLRAHPDAAVLIDDLGNWVTGLLDAAGGWDDPAVDLAGEIADLADAVGEFRGALVIVSPEVGLSVVPTSASGRRFADVLGAANLAVAAACDDAELIVAGRVVALASPREAVEPTQQTEEAAGRVGEEAGGRVGEEAGGRVGEEAGGRVGEEAGGRVGEEAGGRVGEEAGGRVGEEAGGRVGEAQAEPYRDLAEPYRDPAESPAAVDPTDAEVFPVVDLPDEDVAEQTRARLLNLTKPPGSLGRLEDLGVWIASCQGACPPRRITAPHIAVFAGDHGVAADGVSAFPPEVTAQMVANIADGGAAINVLARRAGASVSVFDLSVNADETDPHIARYKVRRGTGDLRRGEAMTLGEARRALAAGRKVADDLVDSGADLLIAGDMGIGNTTPAAVLTGALTGKEPVVVVGRGTGIDDAAWIRKTAAIRDGLRFGRRHRNDPLSLLAAVSGPDFAAMAGFLAQAAVRRTPVILDGMVVTSAALVANALAPGASAWWCAGHRSTEPAHGFALAELGLEPVLELSMRLGEGSGAATALPVVSDAVDILLDMATFDGAGVSHEQR
>CP027433.1|AVM01040.1|2840604_2841402_+|adenosylcobinamide-GDP-ribazoletransferase
MTSGDGPRTGALHLAASWLTVVPVPQPRSAPDARDGTRVIAVVPVLGLIIGTLTAAISFGFGFTELPHLVTGALCVAFLALISRGMHLDGLADTADGLGCYGAPERVRAVMRSGDVGPFGAATLALALLLQAAAIGALAGDHRWFAIAFAVFLGRIAVVVACRRGLPSANPDGFGALVAGTARTSVVVWLLFAAAAAGGAGWLDPPAAEFSGSAAVRAVVAVAAVAAFATVFTRHCARRIGGVSGDVLGATLELSTTLALVLLLL
>CP027433.1|AVM01041.1|2841441_2842542_-|branched-chain-amino-acid-aminotransferase
MTLEFALTDHPHPVSDGRRNEILSAPGFGNHFTDHMVTVDFDRDRGWHRAMVTPYGPIALDPAAMVLHYAQEIFEGLKGYRQPDGSIAAFRPEANAERFNNSARRLAMPEFDVDDFIGALRALVAVDHGWVPASGGEESLYLRPFMFATEPSLGVRPANEYRFVVIASPAGAYFSGGVKPVSVYLCTEYVRASPGGTGAAKFGGNYAASLLAQAQAAEQGCDQVVWLDAVERRYIEEMGGMNLFFVLGTGSDAEIVTPELSGSLLPGITRDSLLTLAADAGYRVSERKISTEELRKGAASGEISEVFACGTAAVITPVGRVKSDTDDYLIGDGATGEVTQALRDTLTGLQRGTFADIHGWMTTLYP

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Crispr_ID: CP027433_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027433_12

3065815-3065973

Orphan

Consensus_repeat	Method
GAACCCGCGCTACCGCCTTGAGAGGGCGGCGTCCTAGGCCGCTAGACGACGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027433_12

>merge|CP027433|12|3065815-3065973|CRISPRCasFinder
GAACCCGCGCTACCGCCTTGAGAGGGCGGCGTCCTAGGCCGCTAGACGACGGGAGCCTAAGAGATTCAATTGTGTCAGACCAGTCGTGGTAGCCCCGACGGGATTCGAACCCGCGCTACCGCCTTGAGAGGGCGGCGTCCTAGGCCGCTAGACGACGGG

>CP027433|12|11|3065815-3065973|CRISPRCasFinder
GAACCCGCGCTACCGCCTTGAGAGGGCGGCGTCCTAGGCCGCTAGACGACGGG	AGCCTAAGAGATTCAATTGTGTCAGACCAGTCGTGGTAGCCCCGACGGGATTC
GAACCCGCGCTACCGCCTTGAGAGGGCGGCGTCCTAGGCCGCTAGACGACGGG

Protein	Signature genes	Signature genes Name	Protein_function
CP027433.1\|AVM01216.1\|3060122_3061067_-\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|259858
CP027433.1\|AVM01214.1\|3057016_3059206_+\|RNA-degradosome-polyphosphate-kinase	unknown	unknown	gnl\|CDD\|235469
CP027433.1\|AVM01221.1\|3064797_3065418_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379203
CP027433.1\|AVM01220.1\|3064204_3064726_+\|PPOX-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274679
CP027433.1\|AVM02269.1\|3070945_3072085_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341028
CP027433.1\|AVM01218.1\|3061880_3063323_-\|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl\|CDD\|235490
CP027433.1\|AVM01217.1\|3061264_3061855_-\|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl\|CDD\|179314
CP027433.1\|AVM01224.1\|3068115_3069168_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377929
CP027433.1\|AVM01213.1\|3056330_3057002_+\|2-phospho-L-lactate-guanylyltransferase	unknown	unknown	gnl\|CDD\|274643
CP027433.1\|AVM01229.1\|3079333_3080236_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176115
CP027433.1\|AVM01228.1\|3075569_3079265_-\|1-pyrroline-5-carboxylate-dehydrogenase	unknown	unknown	gnl\|CDD\|143443
CP027433.1\|AVM01225.1\|3069123_3069978_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
CP027433.1\|AVM01223.1\|3067769_3068129_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
CP027433.1\|AVM01230.1\|3080567_3081614_-\|3-isopropylmalate-dehydrogenase	unknown	unknown	gnl\|CDD\|179579
CP027433.1\|AVM01227.1\|3072175_3075529_-\|NAD-glutamate-dehydrogenase	unknown	unknown	gnl\|CDD\|377452
CP027433.1\|AVM01222.1\|3066194_3067667_-\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
CP027433.1\|AVM01215.1\|3059202_3060117_+\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239645
CP027433.1\|AVM01212.1\|3055205_3056222_-\|glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|234629
CP027433.1\|AVM01219.1\|3063421_3064123_+\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
CP027433.1\|AVM01226.1\|3069974_3070745_-\|2-hydroxyhepta-2,4-diene-1,7-dioate-isomerase	unknown	unknown	gnl\|CDD\|223257

Protein	Function_ID	Function_description	E-value
CP027433.1\|AVM01216.1\|3060122_3061067_-\|DNA-binding-protein	gnl\|CDD\|259858	cd13836, IHF_B, Beta subunit of integration host factor (IHFB). This subfamily consists of the beta subunit of integration host factor (IHF) and IHF-like domains. IHF is a nucleoid-associated protein (NAP) that binds and sharply bends many DNA targets in a sequence specific manner. It is a heterodimeric protein composed of two highly homologous subunits IHFA (IHF-alpha) and IHFB (IHF-beta). It is known to act as a transcription factor at many gene regulatory regions in E. coli. IHF is an essential cofactor in phage lambda site-specific recombination, having an architectural role during assembly of specialized nucleoprotein structures (snups). IHF is also involved in formation as well as maintenance of bacterial biofilms since it is found in complex with extracellular DNA (eDNA) within the extracellular polymeric substances (EPS) matrix of many biofilms.	1.12589e-23
CP027433.1\|AVM01214.1\|3057016_3059206_+\|RNA-degradosome-polyphosphate-kinase	gnl\|CDD\|235469	PRK05443, PRK05443, polyphosphate kinase; Provisional.	0
CP027433.1\|AVM01221.1\|3064797_3065418_-\|hypothetical-protein	gnl\|CDD\|379203	pfam13468, Glyoxalase_3, Glyoxalase-like domain. This domain is related to the Glyoxalase domain pfam00903.	3.20876e-07
CP027433.1\|AVM01220.1\|3064204_3064726_+\|PPOX-class-F420-dependent-oxidoreductase	gnl\|CDD\|274679	TIGR03618, Rv1155_F420, PPOX class probable F420-dependent enzyme. A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomyces, make F420. The Partial Phylogenetic Profiling algorithm identifies this members of this protein family as high-scoring proteins to the F420 biosynthesis profile. A member of this family, Rv1155, was crytallized after expression in Escherichia coli, which does not synthesize F420; the crystal structure shown to resemble FMN-binding proteins, but with a recognizable empty cleft corresponding to, yet differing profounding from, the FMN site of pyridoxine 5'-phosphate oxidase. We propose that this protein family consists of F420-binding enzymes. [Unknown function, Enzymes of unknown specificity].	2.15825e-26
CP027433.1\|AVM02269.1\|3070945_3072085_+\|MFS-transporter	gnl\|CDD\|341028	cd17475, MFS_MT3072_like, Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily. This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.05274e-52
CP027433.1\|AVM01218.1\|3061880_3063323_-\|3-isopropylmalate-dehydratase-large-subunit	gnl\|CDD\|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
CP027433.1\|AVM01217.1\|3061264_3061855_-\|3-isopropylmalate-dehydratase-small-subunit	gnl\|CDD\|179314	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit.	2.48145e-116
CP027433.1\|AVM01224.1\|3068115_3069168_+\|hypothetical-protein	gnl\|CDD\|377929	pfam07853, DUF1648, Protein of unknown function (DUF1648). Members of this family are hypothetical proteins expressed by either bacterial or archaeal species. Some of these are annotated as being transmembrane proteins, and in fact many of these sequences contain a high proportion of hydrophobic residues.	6.94149e-07
CP027433.1\|AVM01213.1\|3056330_3057002_+\|2-phospho-L-lactate-guanylyltransferase	gnl\|CDD\|274643	TIGR03552, F420_cofC, 2-phospho-L-lactate guanylyltransferase. Members of this protein family are the CofC enzyme of coenzyme F420 biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	4.89754e-41
CP027433.1\|AVM01229.1\|3079333_3080236_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176115	cd08423, PBP2_LTTR_like_6, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.00039e-34
CP027433.1\|AVM01228.1\|3075569_3079265_-\|1-pyrroline-5-carboxylate-dehydrogenase	gnl\|CDD\|143443	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.	0
CP027433.1\|AVM01225.1\|3069123_3069978_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.15512e-27
CP027433.1\|AVM01223.1\|3067769_3068129_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	2.35573e-26
CP027433.1\|AVM01230.1\|3080567_3081614_-\|3-isopropylmalate-dehydrogenase	gnl\|CDD\|179579	PRK03437, PRK03437, 3-isopropylmalate dehydrogenase; Provisional.	0
CP027433.1\|AVM01227.1\|3072175_3075529_-\|NAD-glutamate-dehydrogenase	gnl\|CDD\|377452	pfam05088, Bac_GDH, Bacterial NAD-glutamate dehydrogenase. This family consists of several bacterial proteins which are closely related to NAD-glutamate dehydrogenase found in Streptomyces clavuligerus. Glutamate dehydrogenases (GDHs) are a broadly distributed group of enzymes that catalyze the reversible oxidative deamination of glutamate to ketoglutarate and ammonia.	0
CP027433.1\|AVM01222.1\|3066194_3067667_-\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
CP027433.1\|AVM01215.1\|3059202_3060117_+\|NUDIX-hydrolase	gnl\|CDD\|239645	cd03673, Ap6A_hydrolase, Diadenosine hexaphosphate (Ap6A) hydrolase is a member of the Nudix hydrolase superfamily. Ap6A hydrolase specifically hydrolyzes diadenosine polyphosphates, but not ATP or diadenosine triphosphate, and it generates ATP as the product. Ap6A, the most preferred substrate, hydrolyzes to produce two ATP molecules, which is a novel hydrolysis mode for Ap6A. These results indicate that Ap6A hydrolase is a diadenosine polyphosphate hydrolase. It requires the presence of a divalent cation, such as Mn2+, Mg2+, Zn2+, and Co2+, for activity. Members of the Nudix superfamily are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site.	2.63628e-37
CP027433.1\|AVM01212.1\|3055205_3056222_-\|glycerol-3-phosphate-dehydrogenase	gnl\|CDD\|234629	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase.	1.59089e-174
CP027433.1\|AVM01219.1\|3063421_3064123_+\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	5.46077e-49
CP027433.1\|AVM01226.1\|3069974_3070745_-\|2-hydroxyhepta-2,4-diene-1,7-dioate-isomerase	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	2.61171e-102

>CP027433.1|AVM01221.1|3064797_3065418_-|hypothetical-protein
MDDERYVELATVTDWEAVTASTYAGSLEILKPAVDALAAGGRSGDGLITFAIDVADAAATAERLRDAGHEVDEAPVWFEDRGVGFLEIFVRDAPSYFPFFITYDPPRAELGKTRAAYRKEHGIEQPLNPGDLVALLIRTPDPASEAHLLGELSGCTVDGTVVRLPGGEVRFEQGAPAGLYGFVVRGVDVPGGEIEIAGVTVRSEPD
>CP027433.1|AVM01220.1|3064204_3064726_+|PPOX-class-F420-dependent-oxidoreductase
MGTNQRSQIVMTDDEIADFVRRNRTATMATVGRDGQPHLVAMWYGLLESPDGGPVPEVWFETKAKSQKAVNLRRNPRITVLIEDGLTYDTLRGVAIEGFATIYDDEEHCLAAGISVWERYNGPYTDDLRPAVDAMMHKRVAVRVVPERLRSWDHRKLNLPEMPLAGSTSPFYT
>CP027433.1|AVM01219.1|3063421_3064123_+|IclR-family-transcriptional-regulator
MGNSSGIGVLDKSVLVLQTAAERPCNLAELTDATGLPRATAHRLAVGLETHRLLARDGAGRWIPGPALAQLAASAHDAVRDAALAVLPGLQEITGESVQLYRREGAERVCVAAVEPPTGLRDTVPVGMRLPMSAGSAARVLAAYAEPDARANLLSDAVYTDRSLAEVRRRGWAQSAGERADGVASVSAPVHDADGTVVAAVSVSGPIDRMGRRPGERWAADLVAAAQRIGTRL
>CP027433.1|AVM01218.1|3061880_3063323_-|3-isopropylmalate-dehydratase-large-subunit
MTESNATSRPRTLAEKVWDSHVVVPGKVDENGEVGPDLIYIDLHLVHEVTSPQAFDGLRMAGRPLRRPDLTIATEDHNVPTVDIFSPIADQVSALQVETLRRNCAEFGVRLHPMGDDEQGIVHVVGPQLGLTQPGMTVVCGDSHTSTHGAFGAIAMGIGTSEVEHVMATQTLSLRPFKTMAINVDGELPPGVTGKDLILAIIAEIGTGGGQGHVLEYRGPAIEKLSMEARMTMCNMSIEAGARAGMVAPDQTTYDYLKGRPHAPKGAEWDAAVEYWDSLRTDEGAVFDREVHIDATTLTPFITWGTNPGQGLPLGASVPDPADILDETEALAAERALEYMDLVPGTPLRDVEVNTVFVGSCTNGRIEDLRAVAEVLKGRKVADGVRMLVVPGSMKVRAQAEDEGLGEVFTAAGAEWRMAGCSMCLGMNPDQLSAGDRCASTSNRNFEGRQGKGGRTHLVSPAVAAATAVRGRLSSPADLA
>CP027433.1|AVM01217.1|3061264_3061855_-|3-isopropylmalate-dehydratase-small-subunit
MEAIVKHTGVGVPLQRSNVDTDQIIPAVYLKRVTRTGFEDGLFAGWRNDPDFILNNEPWSSGSVLVAGPDFGTGSSREHAVWALMDFGFRVVISSRFADIFRGNSGKAGLVAAQVDQNDVELIWKRLEAEPGLELTVDLQTRTVTAGDLVVPLQIDDYTRWRLMEGLDDIGLTLREVDAITAFEETRPPFKPRTLP
>CP027433.1|AVM01216.1|3060122_3061067_-|DNA-binding-protein
MNKAQLIEELTKRLDADRKTATAAVETLVDTIVRAVSKGESVTITGFGVFEKRRRAPRVARNPRTGETVKVRATSVPSFRPGAQFKDIIAGRKKLKAGEPAVKRTSESSSSAKAATSSTQRKTAAKKTAAKVSTSSTQRKTTAAKKTAAKKTAAKKTAAKKTAAKKTAAKKTAAKVSTSSTQRKTTAAKTTAAKVSTSSTQRKTTAAKKTAAKTTAAKKTAAKVSTSSTQRKTTPAKVSTSSTQRKTTPAKVSTSSTQRKTTAAKKTAAKKTAPAKKTTPAKVSTSSTQRKTTPAKVSTSSTQRKATAAKKSAK
>CP027433.1|AVM01215.1|3059202_3060117_+|NUDIX-hydrolase
MSPVRTVCAGGGVLWRHTAAGKVEVAVVHRPRYGDWSLPKGKAHDGELMVTTAYREVLEETGYSARVGRHLATVRYELKTGAQKKVAYWSMQMTTGRFQVNRETDDLQWLTPERAQRTVSYPADRKVLETFAEHPAEQLHELIVVRHAKAGRRSRFSGDDSDRPLDGVGEQQAEALVPLLGLYGVHHLYAADRLRCVQTLTPLAQELRTDIHVERALTEEAFAADPDAAYARLRELAAPVVGARAVCSQGRTIAPLLGRWAGDAGIELPPSRNRKGSVWILTLRGDTLIQADHIPSPLAGKNEL
>CP027433.1|AVM01214.1|3057016_3059206_+|RNA-degradosome-polyphosphate-kinase
MTATDETTEDASTALPPALPAETVLPDESADLPAERYFNRELSWLDFNSRVLALAEDTSAPLLERAKFLAIFASNLDEFFMVRVAGLKRRDETGLSVRSADGRSPREQLQLIAARTQKIADRHARVFIDSVCPALAEANVHIASWDDLTSRQHVRLREYFHNELFPILTPLAVDPAHPFPYISGLSLNLAVTVRDESEGGEHFARVKVPNNIPRFIRVDKLIPDDAPTGPDGHRPAIFLPLEKLIAANLEFLFPGMHVVEHHVFRVTRNADFEVDEDRDEDLLQALERELARRRFGSPVRLEVGDDMSEHMLELLLRELDVDPADVIGVPGLLDLTSLFEVYGVDRPGLKERPFVPKTHPAFGERETPRNIFQTLQEGDVLVHHPYDSFSTSVQRFIEQAAADPKVLAIKQTLYRTSGDSPVVNALIDAAAAGKQVVALVELKARFDEQANIRWARKLEKSGVHVVYGLVGLKTHCKTCLVVRREGSTIRRYCHIGTGNYNPKTARLYEDVGLFTAAPEIGADLTDLFNTLTGYSRKQDYRNLLVAPHSIRTGIIERIEAEVAALRAGDVNARIQLKANALVDEQIIDALYRASQAGVPVDVFVRGICALRPGVPGLSENITVRSILGQFLEHSRILIFGAAQEYWIGSADMMHRNLDRRVEVMVQVRDRRLAADLQEIFDSAFDPRTRCWELQADGAWKASPAAGEQVRDHQRQMVSRKRRFSDSPGA
>CP027433.1|AVM01213.1|3056330_3057002_+|2-phospho-L-lactate-guanylyltransferase
MVGMSDDVTVVLALKRLREAKSRLAGHTPSPQAREALVAAMFTDTVRAVQVAGAARIVVVSPDPEVRRRAIGLGIDALAEAPDTGGLNDALALGAATARPGHDVLYLQADLPALTAASFAQARIAAHAHPVAFVADRHGTGTALLAVSAGHPFVPGFGPGSAARHRAAGAVELDPDRKRWPDLRCDVDTLADLRAALALRPGPATVAVTGEPAGDVAPREPQR
>CP027433.1|AVM01212.1|3055205_3056222_-|glycerol-3-phosphate-dehydrogenase
MRAVVMGSGSWGTAVAKILVDAGNEVTMWARRPELAEQINTAHENSDYLAGVRLPETLRAVSSVPEALAGAELVVCAVPSQSLRGNLERWREHLPADAVLLSLAKGVEISTGERMSQVIKEVSGFDEKQIAVLSGPNLAREIAEEQPAATVIACTDEEVAKRVQAAFAAPYFRPYTNTDVVGTEIGGAAKNVIALACGMASGMGFGENTLATLITRGLAETMRLGVALGADMRTLAGLAGIGDLVATCSSPLSRNRTFGARLGEGKSLEEAQAATNGQVAEGVKSCRSVRALAHEHGVEMPLTEAVYQVCHEGLAVGDMVGMLLGRDTKPEVYGSADA
>CP027433.1|AVM01222.1|3066194_3067667_-|glutamate--tRNA-ligase
MTVRVRFCPSPTGTPHVGLARTALFNFAQARHSGGTFVFRIEDTDAARDSEESYAAILDALRWLGLDWDEGPEVGGPYGPYRQSERKQLHLDVVDRLVEAGFAYEAYSTPEEVEARHRAAGRDPKLGYDNYDRELTGDQRAAFAAEGRKPVIRLRMPDDDLTWTDLVRGETTIKAGTVPDFALTRGNGDPLYTLVNPVDDAMMKITHVLRGEDLLASTPRQIALYRALIELGVADRVPEFGHLPFVMGEGNKKLSKRDPESNLFHHRDRGFIPEGLLNYLALLGWGLSADNDVFSLEEMVAAFDVRNVNSNPARFDQKKADAINAEHLRRLAPADFAGRLRHFLVEHGRLEEPIDDAVFRPLADLVQTRVQVLGDAWDLIKFAYVSDEDFAFDEKSAAKNLKADAVPVLEATITACESVPDWTTAAIEDALKAALIDGLELKPRKAYGPVRVGVTGAAISPPLFESMEILGRERTLRRLAQAREVAAAAV
>CP027433.1|AVM01223.1|3067769_3068129_+|GntR-family-transcriptional-regulator
MLFRIRPHSDAPIFVQVADAVRTELCAGRLGLGDRLPPAREVAAALNVNMHTVLRAYQDLRDEGLLELRRGRGAVITEAGDRLRSLDDDIRALTAKAAALNIGPDTLSALVKEASHVPE
>CP027433.1|AVM01224.1|3068115_3069168_+|hypothetical-protein
MSPNEPPSPNEPSPTTLTDDEIARRRPVIAFVTVAVVIPVLLIGIATAVQISLLGALPADVAVHWNLAGEPDRWMPAWSLPLITAILGLAVIALIAGPTVRPVAQGDSGAVYRILGGTALGVSVLLAVVFTGAAWYQTDGGTVPITTIVAVASLAAAAVGTVGGLLLPQPPRAERTAAATPMPLGDDEQAVWLRTTTASPGVLAISAAGFAMALLATVFSWADGQSSGFVIGALVVTVVIGLASVVTVAFRVRVSGEGLEVRPLAGFPRLRVPLDDVVDVRVDADVRPIGDFGGYGIRKIGRRTGVVPRRGEGILVERTGDRVFGVVVDDAATGAALLAALADRAKEGDQ
>CP027433.1|AVM01225.1|3069123_3069978_-|alpha/beta-hydrolase
MTRPALARPVAAQLNGITLSYTDVGPADAPLVVMVMGTGSPGRVWHAHQQPALLAAGFRVVTFDNRGVAPSSECADGFTLADMVADTAALIEHLGAGPARVVGTSLGARITQELALARPDVVRGVVMIATYGRSTPMLEAFSHGERELYDRGVELPAEYYAAVTAHMNLSPHTLANDRDARDWLDIIGFGGQARSAGVRAQLNLHEREDNRLAAYRGIDRPALVIGFADDRTLPVFLAREVAEAIPGARYEEIDRAGHFGYLERPEAVNELLIAFLRSVGERGQ
>CP027433.1|AVM01226.1|3069974_3070745_-|2-hydroxyhepta-2,4-diene-1,7-dioate-isomerase
MRLGRVASPDGVAFVAIEGEEGAETAREIAEHPFGDPTFTGRTWALSETRLLAPILATKVICIGKNYADHAAEMGGPPPEDPVIFLKPNTSIIGPGVPIVRPPSSTRVDYEGELAIVIGRPCKDVAAAKAASVILGYTVANDVTARDQQKADGQWTRGKGYDSFCPLGPWIETALDPSDLAISTTLDGETKQSSRTSLMLHGVGEIVEWISRVMTLLPGDVILTGTPAGIGPMVAGQTVSVTVEGIGTLTNPVVDK
>CP027433.1|AVM02269.1|3070945_3072085_+|MFS-transporter
MTSTAATSGFAYVIPALHDGGMSLGTAAALAAVPTVGITAAIIAWGWALDRFGERRILLLSMTITLAGTVGAMVAVWTGAGHWALGAALLIGGVGSGAANGASGRIVVGFFPADQRGTAMGIRQMAQPLGIAVLALTMPVLAATVGITAALAIPAAVTALGLLAVYFGIVDPELPPSSLTSARHGNPYRSSWFLWRIHAFSVLLVIGQSMLWTFVPAWLIVAQGWTPWGAGVLVTVTQVLGALGRMAAGRVSDVWGSRMRPVRVIAVVAAASLALLALTDQLGLSAAPVLMVIASVFTVADNGLAFTAIAESAGPSWSGRALGVQNTAQFVAVAITTPLLGAMIERYGYPVMFGLVAAAPVLALPLIPRDPPIREEKVT
>CP027433.1|AVM01227.1|3072175_3075529_-|NAD-glutamate-dehydrogenase
MNSTRDDDPSPARIEEPPAPAADHLTRLDRLAPGEVDVNLASAGEEGEGLFSLYAAGARVALSDVLPILHSLGVRVVDERPHSVVRPDGDHAWIYDFTLSPSALPADPARVVSAGGQTVGERFGDAFLAVWRGSAEVDQFNRLVLTSGLHWREVELLRGYAKYLGQARFPYSAQRIAGVLAEHPEMTQRIVALFRLQFAPGQADPDRAEVLVAELLTAIDAVASLDVDRILRAYLDLVRATLRTNYFRRLDDSVRHSSALALKFSPSLLGFLPAPRPRIEVYVYSPRVEGVHFRYGPVARGGLRWSDRLEDFRTEVLGLVKAQAVKNAVIVPVGAKGGFVSKRPPAATGDSAADREAFRAEGVACYRTFIAALLDVTDDVDPRTGVTVPPPLVVRRDPDDTYLVVAADKGTASFSDEANDVAARYGYWLGDAFASGGSVGYDHKGMGITAKGAWESVKRHFRELSLDPQSEDVTVAGIGDMSGDVFGNGMLMSPHIRLVAAFDHRHVFVDPDPDAARSFAERRRLFGLPRSSWADYDPALISPGGGVFPRSAKSIEITGEMRRALGIDDDVVPLTPTALIRAVLQAPVDLLWNGGIGTYVRASAETDLDVGDKANDAVRVAAPTVRARVIGEGGNLGVTPRGRVEFALAGGCVNTDALDNSAGVDCSDHEVNIKVLLDGLVSAGAVSPDARDALLVEMTDDVEQLVLRQNYSQNELVGTCRAAAAGRFAVHTRQIRQLEAKGALERDLEALPDDAEITARAARGVGLVSPELAVLIAHVKLDLKAALLESTFVDSEFLRDRLAGSFPHALRTRHPEAITAHPLRREILATVLANEVVDVGGVSYVFRICEDTGASAVDATRAFVAASSIVGVPDRVARIRETAPSVAVSNAMMSEVRRLVDRVARWLLDHRPQPLAVGAETARYAVGMTELMPTVLERLQGADAAIVDERSRPLIDAGADPVDAREVMSVLMAFPGLDIIDLADIAHCELDRAADVYYALNAHLSIDHLLTAISALDDTERWNALARLALRDDVYRSVRALTLDVLTFTDPDAPAAERIGDWEATNGARLGRTRAVLDEIARSRVRDLAALSVAAQQIRGMVSRGPVSSSDGSSVIE
>CP027433.1|AVM01228.1|3075569_3079265_-|1-pyrroline-5-carboxylate-dehydrogenase
MPLYFNGDSGEHGCKEAGAVRPHTPPIERGSPVTNAVEARQQVRPQDLADDAVALVQRWLAEAEQYPVDAAAARLTGVLSDPNGLEFTVGFVDGVVRPEDRKAAAKKLKSLAPLTPKFLPAPMRGAVSLGGVMAQPLPGVVVPTARRVLREMVSHLIIDATDSKLGPAIAKIKRDGVRLNINLLGEAILGEHEAQRRLAGTHKLLSRPDVDYVSIKVSSTVAPHNHWAFDEAVDGITEQLVPLFARAAGAGSGPNDTAASPQKFINLDMEEYKDLDLTIAVFKKILERPEFHGLSAGIVLQAYLPDALGAMIDLQEWAAARVAGGGAPIKVRVVKGANLPMERVDAAVHGWPVATWGAKQESDTSYKAVLDYALHPERVTNVRIGVAGHNLFDIALAWLLAKRRGAEAGIDVEMLLGMATAQAEAVKREVGSLLLYTPVVHPQEFDVAISYLIRRLEEGASQENFMSAVFELNDDASMFAREKERFLASLADLESITADGDPEHFRVPSPSRRQDRTRYDADGAEERIEALIQRGVRGEFDNTPDTDPDLPGNRAWGRAIAGRMVTSSLGTELVAASMIGDESALDRVISTGVNAADGWQALSADERARILYRAGERLEARRADLLEVMGSECGKTLDQGDPEVSEAIDFANYYAMLGQLLEQTDGGQPRPKKLVAVIPPWNFPVAIPAGGVLAGLAAGSAVVIKPASTSARSAAVMVEALWEAGVPRDVLQLVQFSDRTLASGLVADPRVDRLILTGAYETAESFRALRRDLPILAETSGKNAIIVTPSADLDLAAKDVALSAFGHAGQKCSAASLVILVGSVATSERFRRQLLDAVKSLKVGTPEHLETQMGTIITAPSGKLLRGLTTLGPGETWLLKPEPLPSDSPLALDKKGGNRLWSPGVRDGVRRGSEYHKTEYFGPILGIMTATTLDEAIDIVNEIDYGLTSGLHSLDRDELKIWLDRIEAGNAYVNRGITGAIVRRQSFGGWKKSAIGAGTKAGGPNYLHGLVDWVDAPVAKGAGAPRPAAAPLLAAAAEAGVSGPDFAWLSAALSSDAAAWVDEFGIARDASQVGVERNLLRYLPVPVTVRIAADAPLHHVIRAVAAGLAAGGSPTVSTPIALPEAVQSALRAAGVDLLFQDDAGWASHLGRLARKDGAGASARVRIVAGASRADQVAAVYEATGGKPDVAVYGGEVVSAGRVEMLPHLREQAVSITAHRFGTPNHLSDGLI
>CP027433.1|AVM01229.1|3079333_3080236_+|LysR-family-transcriptional-regulator
MLEVKRLRLLRELSARGTVVAVAEALNYSPSAVSQQLSLLEREVGASLLQRNGRLLELTATAEYLVAEADELLNHIERIESGIRLRQGEVSGTVRVAAFQTVMLALLPQVLDRLRTDHPNLRIDVMQHEPETAHFETWARGFDLVIAEQYPGHATVQFSGLDRAPLTRDRIQLALPLIAGRPEFDSITSLADASDVPWVMEPRRAASRHWAEQLCRSAGFEPDIRFETADLQAHIRLIETGNAVALVPGLVHAQGRPRIRLIDLPGDPERTVFTAARSAQGEDPAIAAVRAALAEEAARR
>CP027433.1|AVM01230.1|3080567_3081614_-|3-isopropylmalate-dehydrogenase
MKLAVIPGDGIGPEVTAQALRVLTKLHPEVQTTEYDFGARRYHATGDLLTDDDVASLREHEAILLGAIGDPSVPPGILERGFLLKMRFVLDHHVNLRPSVLFEGVASPLAAAGSAASGANGTGDPAIDFVVVREGTEGPYTGNGGAIRVGTPHEVATEVSVNTRFGIERVVRDAFARAQARSKKLTLVHKTNVLTFAGSMWARTVDEVGAEFPEVSVDYCHIDAATIYLVTDPGRFDVIVTDNLFGDIITDLAAAVTGGIGLAASGNIDATRANPSMFEPVHGSAPDIAGQNLADPTAAILSVALLLRHLGDDAGAERVEAAVARDVATRGDERGSTTEVGDRILALV

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Crispr_ID: CP027433_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027433_13

3268510-3268611

Orphan

Consensus_repeat	Method
CGCTCCTTGAGCCGGGCGCGAGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027433_13

>merge|CP027433|13|3268510-3268611|CRISPRCasFinder
CGCTCCTTGAGCCGGGCGCGAGCGAAGCGAGTGCCCGAGTCGAAAGGCCCCCGCCCCTTGAGCCGCGTCGAAAGGCCCCGCCCCTTGAGCCGGGCGCGAGCG

>CP027433|13|12|3268510-3268611|CRISPRCasFinder
CGCTCCTTGAGCCGGGCGCGAGCG	AAGCGAGTGCCCGAGTCGAAAGGCCCCCGCCCCTTGAGCCGCGTCGAAAGGCCC
CGCCCCTTGAGCCGGGCGCGAGCG

Protein	Signature genes	Signature genes Name	Protein_function
CP027433.1\|AVM01372.1\|3276064_3277360_-\|glutaminase	unknown	unknown	gnl\|CDD\|377427
CP027433.1\|AVM01355.1\|3258214_3259498_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
CP027433.1\|AVM01370.1\|3273903_3274251_-\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM01364.1\|3267571_3268330_+\|peptide-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
CP027433.1\|AVM01356.1\|3259519_3260080_+\|nucleosidase	unknown	unknown	gnl\|CDD\|235538
CP027433.1\|AVM01363.1\|3265830_3267570_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
CP027433.1\|AVM01369.1\|3272945_3273779_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|369792
CP027433.1\|AVM01360.1\|3263638_3264490_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234663
CP027433.1\|AVM01373.1\|3277572_3278595_+\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274817
CP027433.1\|AVM01371.1\|3274315_3275974_-\|heme-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223562
CP027433.1\|AVM01365.1\|3268754_3269687_-\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM01367.1\|3270533_3271685_+\|capsular-biosynthesis-protein	unknown	unknown	gnl\|CDD\|214858
CP027433.1\|AVM01361.1\|3264539_3265271_+\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM01362.1\|3265367_3265688_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378714
CP027433.1\|AVM01366.1\|3269709_3270453_-\|DUF1275-domain-containing-protein	unknown	unknown	gnl\|CDD\|377734
CP027433.1\|AVM01374.1\|3278624_3280094_-\|NAD-dependent-succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143421
CP027433.1\|AVM01357.1\|3260413_3261379_-\|short-chain-dehydrogenase	unknown	unknown	gnl\|CDD\|181139
CP027433.1\|AVM01359.1\|3262606_3263638_-\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|223597
CP027433.1\|AVM01368.1\|3271668_3272235_-\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM01358.1\|3261448_3262498_-\|cell-wall-hydrolase	unknown	unknown	gnl\|CDD\|376559

Protein	Function_ID	Function_description	E-value
CP027433.1\|AVM01372.1\|3276064_3277360_-\|glutaminase	gnl\|CDD\|377427	pfam04960, Glutaminase, Glutaminase. This family of enzymes deaminates glutamine to glutamate EC:3.5.1.2.	7.50643e-167
CP027433.1\|AVM01355.1\|3258214_3259498_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	5.30053e-08
CP027433.1\|AVM01364.1\|3267571_3268330_+\|peptide-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	5.4835e-138
CP027433.1\|AVM01356.1\|3259519_3260080_+\|nucleosidase	gnl\|CDD\|235538	PRK05634, PRK05634, nucleosidase; Provisional.	5.21502e-73
CP027433.1\|AVM01363.1\|3265830_3267570_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.04936e-68
CP027433.1\|AVM01369.1\|3272945_3273779_-\|HAD-family-hydrolase	gnl\|CDD\|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	4.10257e-54
CP027433.1\|AVM01360.1\|3263638_3264490_-\|hypothetical-protein	gnl\|CDD\|234663	PRK00142, PRK00142, rhodanese-related sulfurtransferase.	2.07678e-141
CP027433.1\|AVM01373.1\|3277572_3278595_+\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274817	TIGR03858, LLM_2I7G, probable oxidoreductase, LLM family. This model describes a highly conserved, somewhat broadly distributed family withing the luciferase-like monooxygenase (LLM) superfamily. Most members are from species incapable of synthesizing coenzyme F420, bound by some members of the LLM superfamily. Members, therefore, are more likely to use FMN as a cofactor.	0
CP027433.1\|AVM01371.1\|3274315_3275974_-\|heme-ABC-transporter-ATP-binding-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	8.79307e-149
CP027433.1\|AVM01367.1\|3270533_3271685_+\|capsular-biosynthesis-protein	gnl\|CDD\|214858	smart00854, PGA_cap, Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.	7.79371e-79
CP027433.1\|AVM01362.1\|3265367_3265688_+\|hypothetical-protein	gnl\|CDD\|378714	pfam11774, Lsr2, Lsr2. Lsr2 is a small, basic DNA-bridging protein present in Mycobacterium and related actinomycetes. It is a functional homolog of the H-NS-like proteins. H-NS proteins play a role in nucleoid organisation and also function as a pleiotropic regulator of gene expression.	1.88584e-42
CP027433.1\|AVM01366.1\|3269709_3270453_-\|DUF1275-domain-containing-protein	gnl\|CDD\|377734	pfam06912, DUF1275, Protein of unknown function (DUF1275). This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although most members have 6 TM regions, and may be putative permeases.	1.86022e-33
CP027433.1\|AVM01374.1\|3278624_3280094_-\|NAD-dependent-succinate-semialdehyde-dehydrogenase	gnl\|CDD\|143421	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.	0
CP027433.1\|AVM01357.1\|3260413_3261379_-\|short-chain-dehydrogenase	gnl\|CDD\|181139	PRK07832, PRK07832, SDR family oxidoreductase.	3.02652e-162
CP027433.1\|AVM01359.1\|3262606_3263638_-\|GTP-binding-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	7.94675e-66
CP027433.1\|AVM01358.1\|3261448_3262498_-\|cell-wall-hydrolase	gnl\|CDD\|376559	pfam01520, Amidase_3, N-acetylmuramoyl-L-alanine amidase. This enzyme domain cleaves the amide bond between N-acetylmuramoyl and L-amino acids in bacterial cell walls.	4.31751e-37

>CP027433.1|AVM01364.1|3267571_3268330_+|peptide-ABC-transporter-ATP-binding-protein
MSTPEVPLATPDPVSLTGRDLHLSFGANDVLRGVDIQVDAGTTTTVIGPSGSGKSTLLRVLNRLHEPQSGDILIDGRSVLKDNPDELRRRIGMVFQQFNLFPHMTVADNIAFAPRKIQKLGKDEARELAMHQLELVGLTEKADVRPSTLSGGQQQRVAIARALAMKPQIMFFDEATSALDPELVKGVLALMTELSREGMTMVVVTHEMGYARNVSDSVLFMDEGVVVETGPPDRLFDDPSSDRLQNFLSEVL
>CP027433.1|AVM01363.1|3265830_3267570_+|amino-acid-ABC-transporter-permease
MSLHSFRRRLLALILVAFGVLVVASCGTADDDSGKDGLCAPPGIKTATAAPENLNTSDQAVDTFTTPTVAPLESIDVNQLGLIQPGVLTVGTLSDAPPSICLNSSGQYTGFDNELLKAVAAKIGLEIKFVGTEFAGLLAQVANKRFDVGSSSITTTAERRKNVAFTNGYDFGYFSLVASQTGAVQGFDDLSGSHRIGVVQGTVQDDFVTNTLNLDPVKFPDYATAYANLKSGQIDAWVAPSQQAEGAIQDGDGMAILEDTFSVNNFVGWAAPIGNQKLIDALNSGLDAVIADGTWASLYTDWVPRELPEGWKPGSKAAPEPQLPDFRTLAAENATDPNSPAVESKGTLAQLQDTFFNWDLYKQAFPELVKTGLPNTIILAIASGIIGTVLGMLLAMGGISRSRWLRWPARVYTDVFRGLPAVVVILIIGLGVGPLVKDWTGGNPYWLGAVALALLAAAYIGEIFRSGIQSVEPGQMEAARALGLSYRRSMAQIVVPQGVRRVLPALMNQFIVLIKDSSLIYFLGLLATQRELFAVGRDLNAQTGNLSPLVAAGIVYLILTVPLTHLVNYIDKRLRTGKA
>CP027433.1|AVM01362.1|3265367_3265688_+|hypothetical-protein
MAKRTKIQIVDDIDGAELDEYETVRWSLDGKNYEFDTSPEHAAEFRDAVATYVAASRTVGRTGGRRAAAPKTDTRAIRAWANANGFTVSDRGRIPAEIIAAYEAAN
>CP027433.1|AVM01361.1|3264539_3265271_+|hypothetical-protein
MTAAIAAAAALAVTASGCGLLEEQNRSKPIEIPGTNALVTESAPASLSTSQTPVTTSRTYTPAPRDSYDRLISSAPRAGLADFRRGATTAAGERLEGLSGIHFSTPDRVIRCSTGNNGADALVCASDRIDGPDAAPHDAPAGCEWDPNLAVLSASGFSAGGCTNLYPVLYRSHILEYGESIVVDRFSCLSEVAGLYCLAAGSDEGFAITRTGVEKIHPEERAPNDLIGDTPADSSAVTTTPTR
>CP027433.1|AVM01360.1|3263638_3264490_-|hypothetical-protein
MATPKIVLFYVFTPLPDPDAIRLWQSAVCESLGLRGRIIVSSHGINATVGGDLPDVKRYVRATRGYPAFRNADVKWSEGAGDDFPRLSVKVRPEIVSFGAPDSLVVTADGLVGGGARLSPEGVHRLVEECGDEVVFLDGRNAIEAEIGRFAGAVIPPVSTTRDFVPLIESGALDHLKERPVVTYCTGGVRCEVLSVLLRNRGFSEVYQLDGGIVRYGERFGDDGLWEGSLYVFDKRMSVDFSDRARVIGRCRECDAPTNRVVNHPDRLGRELAVLCTDCREES
>CP027433.1|AVM01359.1|3262606_3263638_-|GTP-binding-protein
MDARGVPVVVLAGFLGAGKTTILNHLLRHSAGRRFGVLVNDFGAVNVDALLVSGRSAGTLNLANGCICCTTDAEGLAEALAELARSGVDAIVIEASGIAEPRALIRLVLAARDRRVAYGGLVYVVDAALVERTLAEHPSVAGHLAVADLVVVNKKDLVSEAGLDAVLKRVRELNATAPALPVIGGAVDPGLLAEATGGSSYDDEPRQLTIGELLEHPGHAHAHLHDAFESVAVQTPDPVDPRRLAALLERPPAGAYRCKGLALVDLPGHRDHAYEVHAVGGFVRVGVRPWPDGRAETSLVIIGAGLDAGAAREALCEVLTPADPADEHGILHLTRHLPVVTED
>CP027433.1|AVM01358.1|3261448_3262498_-|cell-wall-hydrolase
MSVVSVRRRPARMLSVAAAAALAAGTVVAAPVSAEPDAPRPGSLTGRTVFLDPGHQGSAAGHDLNKQVPDGRGGKKPCQTTGATAVTGKKEHSINWDIAQLVKAGLEAEGAKVVLSRADDKGWGGCVDERAAAAGASKADIAVSLHADSTSAGADRDKSGFHMIVPTLPIPDPVVSSVQASDGRKASQAMRDAFKSSGFKPANYAGVQNGIQTRPDIAAVNLTKVPAVFVEMGNLSNPSDAKDLSSAEGSARYALAITKGIRSYLSTAPAPAPAPLAPGEVAPGAVDSGDAEDLTALAALGPLFEKLAAAGSVDEAAAILAAEGSDVSAQVLKAMLAVVYTVFGGKLPI
>CP027433.1|AVM01357.1|3260413_3261379_-|short-chain-dehydrogenase
MGLNLPSLKTIRELFSMPTPVPSFRGRKVLITGAASGIGRATALEVAAQGGELVLTDVQVGALDQTVAEINDAGGTVLYHRAGDVSDYEWVAAFARDVDAEVGVMDVVMNVAGISAWGTVENLEHKTWRAMVEVNLMGPIHIIECFVPQMVRRGQGGQLVNVSSAAGLLALPWHAAYSASKFGIRGVSEVLRFDLRRHGIGVSLVCPGAVATPLVDTVEIVGLDRDNPVVEKQVGGFHRIAVTPESAAKSICKGVVRNKYMVYTSFDTRFGYWWARKFALPYEIVMRIANNRFDQLARLSAVTSGARGSSDSAESTTATRD
>CP027433.1|AVM01356.1|3259519_3260080_+|nucleosidase
MYDDVLVVAATRAEAAHVPDDAQLLITGLGKVRAASSLTRRLATEPGRFRRVINIGTAGALHRHHGGLYVPSRVVEHDISAAELHALGYPVQDCWEVSDGDGSVLATGDTFVTDESVRLRLAARADLVDMEAAALAHVCADFSVPIRLVKVVSDYADDSAMDWPSAIDAAARDLAEWLCDTEFGEH
>CP027433.1|AVM01355.1|3258214_3259498_+|hypothetical-protein
MASDNSRRAARFGRLSTDAPVPADQQSVIPGVPGVPWWGAVLIAAVLTAIGATIDALANSSLGLVYNLFFLFGCVIAALAVRRRALFTAAVQPPLVSVFIGLTALWGLAQAASTNNKPQGMRQVVLNVALPFSNLFPWIAGVFLVTLLIVLVRWFVTRDAAATKNVPGKGTRSAGAKKATPATSKKPKATRNASSTKTSTKNVSTKSKAAEKTKKLGTAPAAKRAATKSGAKSGTAKSGTAQPATAKPAARKAESGTSDSRRRAAPRPAQTDAGEPHTENAPAGNRRPARRPAAGERSRADQARPAESRAERPRPAEQPRPADPRSGDPRPGEPSPDSPRAESARAEQSGDPGQSPQRASAGRPAASASRPVRKAPTVVGQATERPVRRAAPQVIPPRPATDRPRRTAGQSLREQGAVEDLTLGLDD
>CP027433.1|AVM01365.1|3268754_3269687_-|hypothetical-protein
MQNADDDLAARLLDAQVAFGLRQLTEETAFRALVEEEIEGFFDEAGTVPLETVMPRELIKQVARKYTMAFPVEGAIPELAGQVAARLYRHEIHETTSLADVIETRRFDELASTATDLRVARRAIDQVLDSPTTTDTVVEVMQRAVEERVGTRLGRRLSSLVERLTRSGTEMALETAREDSDELLLDAVRDFWRGRADDSVGGFRDTVSESDVEDVVVIAFEFWRDFRQSEYFRTLLDSGIDEVFDTYGATPLADVIEDLGIGADDLREEALRFGPVVIGRLDREGFLERIVRRRLAPFYASPEFAALGLS
>CP027433.1|AVM01366.1|3269709_3270453_-|DUF1275-domain-containing-protein
MCSVKMIARREVTLAVVLSAAAGYVDAIGYVYLGGFFVSFMSGNTTEFATSLAHGDWGPVRLAGTLIGMFFAGTVLGAVLVRVGDGRTTVLAATSVLVAVTAALGDLTDSSVPVTVLLPLSMGVVNATFLSAGETSIGLTYMTGALVKAGQRLVDAFRGGPRWLWARHLALWASLLAGGVVGAAMLRWIGLGGALWPIAGLLAVITVIVAFERKRRGVFGAVAPSSRRETYVHGPNAPGAGPDGATR
>CP027433.1|AVM01367.1|3270533_3271685_+|capsular-biosynthesis-protein
MGSHRRVRSRRLSPGLALLVAGLFTVTGCSVESSSTGSSKVPSASTSGSTTSSDDASGTLTLSWVGDTILGTDDKFGGLTLPAAWAQSGKDPNYFFQNVKKHFDADDLTIANFEVALTNSRNKRYKGDGEVYHFHGEPAIAKTLPAGGIDVVTIANNHTWDYGRKGFDDTVRALDAAGVEYVGAGNPGYDGSDYDHPLLKDVKGIKVGLLSYQTWQDTPQTRAKVRSDIAKLRKDGAAVVIPYFHWGLEGVHEPYEVQRDLARVAIDAGADAVIGTHPHVLQSMDVYKGKLIAYSLGNFSFGGNTNPSDKRTVILQTRVKVDDGKVGAVEYRVIPTRLSRTESHNDYVPTPYGPAESRQVASFLNQISPNLDGTVSQRFTPVP
>CP027433.1|AVM01368.1|3271668_3272235_-|hypothetical-protein
MLALLAAGVLIAVSPRRALSGTAAAFAVVFGLMSVGIWVGRTAFVSAIAPATMPPDVAGAIFDQVSALMSAAVVALTVLGALIAVGTWMAGPARPARALRDVAGAGFASIRSALDAHGGDTGRVGAVVERWRHAIVSVAVLLGLAGLVATRPVSVAGVVRLVVGLILLLVAIELIRRPAAADDLTEPV
>CP027433.1|AVM01369.1|3272945_3273779_-|HAD-family-hydrolase
MTDLDLPDIQPDVRLVVSDMDGTLLTEDGAVPDGFWPLLDTMRQRGIHFVPASGRQFHTLENLFARVPQGISYIAENGNLVVHDGLSRASSTFDPALARDVVVAVRESGRDLGLVVCGVRGGYVERGDLPFLDESDKYYLRLDQVDDLLSVDDEILKLAIYDFDDAAAAAHAHFESFADRCRVVVSGPNWIDLMSPGVDKGIGVRMLQDELGVTAAQTVVFGDYLNDLEMLDAADWSFAVANAHPAIRARARYGAPSNAEEGVVQVLRALLNGHGRG
>CP027433.1|AVM01370.1|3273903_3274251_-|hypothetical-protein
MSFPGAQPQSPLPYAPPPAVTHDALPPSSPGSYGYPAGAPHPDHSFTLPKGFVAVVVVGLVYAIGRATGLALQFSVVTGDRCPGRPGRRRRRPVRYRVALRTRPRPGAPERRPTR
>CP027433.1|AVM01371.1|3274315_3275974_-|heme-ABC-transporter-ATP-binding-protein
MTATLVAKDLSGGYAHRVLFDHLDLTVAPGDVVGVVGANGSGKTTLLRVLAGDLAPLAGTVSRTPPDAFVGWLPQEHTRVPGETVGEYVARRTGCAAAQRALDEAAAALADPEGGADADDPADRYAAALDHWLATGAADLEERLPAVLAGLGLATAAPASSLMTGLSGGQAARVGLAALLCSRFDVALLDEPTNDLDLDGLARLEEVVQGMRGGVVLVSHDREFLARSVTRVLELDLAQHTNTVFGGGYDSYLEEREVARRHRREEYEEFAARKADLVARARTQREWSSQGVRNAMRKAPDNDKIRRRAATESSEKQAQKVRQMESRIARLEEVAEPRKEWVLEFSIGSAPRSSSVVSTLNEAVVHRGDFTLGPVSLQVNGGDRIGITGPNGAGKTTLLRLILGELIPDAGAAHLGPSVAVGEVDQSRGLFTGPAPLAGRFGELMPELNPSEVRTLLAKFGLRADHVDRPVSGLSPGERTRAALALLQARGTNVLVLDEPTNHLDLPAIEQLEQALDSYDGALLLVTHDRRMLQKVRVDRRWHVEDGRVREH
>CP027433.1|AVM01372.1|3276064_3277360_-|glutaminase
MRSPIPDYLAEALAAVEHDDSGATADYIPELASADPDRLGVTIATTDGRTYGAGDTRTPFSIQSISKPFVYALALADRGFDAVLEKVGVEPTGDAFNEISLEPGSGRPQNPMINAGAIATHTLVGHEDMSAEHRVERVIEGLSAFAGRRLDVDEDVFASEIGHAFRNRALANLLRAYEVTSENPVVSVAGYTRQCSLIVTTEDLAVMAATLANGGVNPLTGVEVVPRRVVRQTLSVMATCGMYDGAGDWMTRVGVPAKSGVAGGLIGALPGQVGIATFSPRLDRHGNSVRGVDLFQRFTSDMGMHLMEVPASTSSVVRRRRSLGSGPLATDVLSLQGALRFAAAERVVREFVDRPPTQRRVAISLRRVQSLDDVSRRMLLEVVRRLSLDGHDVFVIDPDGVLPDPDPGTGGRLTVLAGLGDIVSPPADPVT
>CP027433.1|AVM01373.1|3277572_3278595_+|LLM-class-flavin-dependent-oxidoreductase
MSEIEFGLDTFGGVTHDEHGRPTPHPQVIRDLVGDAVVADELGLDFFAVGEHHRPDYAVSSPETVLAAVAGQTSRIRLGSAVTVLSSDDPVRVYQRFATLDAVSRGRAEIVAGRGSFIESFPLFGYELADYDLLFDEKLALLAELIEEQPVTWSGTTRAPLTDQRVFPTTAQKIPVWVGVGGTPESVVRTARHGFGLFLAIIGGGPARFSSYIDLFERAQDQFGVPRQRVAVHSPGLVAETDEQARELAYDGWLAQRNKIGAERGWGPAGPREFEDEVARGSLYLGSPETVAAKLARTLTTLKVDRFDLKYDQPVPHAVQRRSIELYGEKVVPRVKDLLA
>CP027433.1|AVM01374.1|3278624_3280094_-|NAD-dependent-succinate-semialdehyde-dehydrogenase
MTDKRTLLDQVPTGIWLSNTSVDAITGKTFEVIDPATGDVLAEVADGGREDALAALDGATEAGPAWAATPPRERAEILRSAFEEVTRRRDDFALLMTLEMGKILSESVGEVTYGAEFLRWFSEEAVRIAGRTATAPAGNGEIVVVKEPVGPSYAITPWNFPLAMGTRKIGPALAAGCPMIVKPAEDTPLTMLLLAKVFADVGLPPGVLTVVPTKTGAAEQSAVLMSDRRLRKVSFTGSTGVGSLLIRQSADQVLSTSMELGGNAPFIVFDDADLAAAVDGAMAAKMRNGGEACTAANRFFVHRGIADRFVPALTARLDAMTVGPGYDAGSDLGPLINGKQLDRVAALVDGAVADGATVHTGGRRIDGPGFFYPPTLLTDVPVGDPILLEEIFGPVVVIQTFDDEADVIARSNDTDYGLASYFFTNDLNRVKRVASALEYGMVGVNRGVISDPAAPFCGVKHSGLGVEGGVDGIDEYLTTKYIALTPTSV

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Crispr_ID: CP027433_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027433_14

3316550-3316705

Orphan

Consensus_repeat	Method
CCCCTCGATGATTGAGCGAGCGCAGCGAGTCGAAATCATCCGCCGCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027433_14

>merge|CP027433|14|3316550-3316705|CRISPRCasFinder
CCCCTCGATGATTGAGCGAGCGCAGCGAGTCGAAATCATCCGCCGCCCCTTCGATGACTGGGCGAGCGCCACGCCGCCCCTTCGATGACTGAGCGAGCGCTACGCCTCCCCTCGATGATTGAGCGAGCGCAGCGAGTCGAAATCATCCGCCGCCCC

>CP027433|14|13|3316550-3316705|CRISPRCasFinder
CCCCTCGATGATTGAGCGAGCGCAGCGAGTCGAAATCATCCGCCGCCCC	TTCGATGACTGGGCGAGCGCCACGCCGCCCCTTCGATGACTGAGCGAGCGCTACGCCT
CCCCTCGATGATTGAGCGAGCGCAGCGAGTCGAAATCATCCGCCGCCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP027433.1\|AVM01406.1\|3316842_3317457_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
CP027433.1\|AVM02303.1\|3319508_3320000_+\|ferritin	unknown	unknown	gnl\|CDD\|153113
CP027433.1\|AVM02302.1\|3309890_3311279_+\|triacylglycerol-lipase	unknown	unknown	gnl\|CDD\|367570
CP027433.1\|AVM01403.1\|3314120_3314450_+\|resuscitation-promoting-factor-like-protein	unknown	unknown	gnl\|CDD\|369056
CP027433.1\|AVM01407.1\|3317993_3319322_+\|amine-oxidase	unknown	unknown	gnl\|CDD\|366721
CP027433.1\|AVM01411.1\|3323920_3324529_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377627
CP027433.1\|AVM01402.1\|3311964_3313848_-\|propionyl-CoA-synthetase	unknown	unknown	gnl\|CDD\|341271
CP027433.1\|AVM01400.1\|3308457_3309675_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173847
CP027433.1\|AVM01399.1\|3306242_3306902_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|316044
CP027433.1\|AVM01405.1\|3316040_3316475_-\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM01398.1\|3305359_3306160_+\|histidinol-phosphatase	unknown	unknown	gnl\|CDD\|238819
CP027433.1\|AVM01412.1\|3324605_3325304_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|133407
CP027433.1\|AVM01404.1\|3314642_3316010_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224157
CP027433.1\|AVM02301.1\|3307018_3308422_+\|butyryl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173847
CP027433.1\|AVM01409.1\|3320631_3321759_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224594
CP027433.1\|AVM01413.1\|3325723_3326011_+\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM01401.1\|3311311_3311932_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
CP027433.1\|AVM01408.1\|3320154_3320604_+\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|281995
CP027433.1\|AVM01410.1\|3321883_3322249_+\|DUF4440-domain-containing-protein	unknown	unknown	gnl\|CDD\|227327
CP027433.1\|AVM02304.1\|3326223_3329205_-\|membrane-protein	unknown	unknown	gnl\|CDD\|234609

Protein	Function_ID	Function_description	E-value
CP027433.1\|AVM01406.1\|3316842_3317457_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.46637e-08
CP027433.1\|AVM02303.1\|3319508_3320000_+\|ferritin	gnl\|CDD\|153113	cd01055, Nonheme_Ferritin, nonheme-containing ferritins. Nonheme Ferritin domain, found in archaea and bacteria, is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The ferritin protein shell is composed of 24 protein subunits arranged in 432 symmetry. Each protein subunit, a four-helix bundle with a fifth short terminal helix, contains a dinuclear ferroxidase center (H type). Unique to this group of proteins is a third metal site in the ferroxidase center. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite.	2.40946e-57
CP027433.1\|AVM02302.1\|3309890_3311279_+\|triacylglycerol-lipase	gnl\|CDD\|367570	pfam03583, LIP, Secretory lipase. These lipases are expressed and secreted during the infection cycle of these pathogens. In particular, C. albicans has a large number of different lipases, possibly reflecting broad lipolytic activity, which may contribute to the persistence and virulence of C. albicans in human tissue.	9.36578e-56
CP027433.1\|AVM01403.1\|3314120_3314450_+\|resuscitation-promoting-factor-like-protein	gnl\|CDD\|369056	pfam06737, Transglycosylas, Transglycosylase-like domain. This family of proteins are very likely to act as transglycosylase enzymes related to pfam00062 and pfam01464. These other families are weakly matched by this family, and include the known active site residues.	1.27772e-31
CP027433.1\|AVM01407.1\|3317993_3319322_+\|amine-oxidase	gnl\|CDD\|366721	pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase. This family consists of various amine oxidases, including maze polyamine oxidase (PAO) and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.	5.61654e-63
CP027433.1\|AVM01411.1\|3323920_3324529_-\|hypothetical-protein	gnl\|CDD\|377627	pfam06197, DUF998, Protein of unknown function (DUF998). Family of conserved archaeal proteins.	0.00030082
CP027433.1\|AVM01402.1\|3311964_3313848_-\|propionyl-CoA-synthetase	gnl\|CDD\|341271	cd05967, PrpE, Propionyl-CoA synthetase (PrpE). EC 6.2.1.17: propanoate:CoA ligase (AMP-forming) or propionate#CoA ligase (PrpE) catalyzes the first step of the 2-methylcitric acid cycle for propionate catabolism. It activates propionate to propionyl-CoA in a two-step reaction, which proceeds through a propionyl-AMP intermediate and requires ATP and Mg2+. In Salmonella enterica, the PrpE protein is required for growth of Salmonella enterica on propionate and can substitute for the acetyl-CoA synthetase (Acs) enzyme during growth on acetate. PrpE can also activate acetate, 3HP, and butyrate to their corresponding CoA-thioesters, although with less efficiency.	0
CP027433.1\|AVM01400.1\|3308457_3309675_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	1.67979e-77
CP027433.1\|AVM01399.1\|3306242_3306902_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|316044	pfam13483, Lactamase_B_3, Beta-lactamase superfamily domain. This family is part of the beta-lactamase superfamily and is related to pfam00753.	1.79952e-17
CP027433.1\|AVM01401.1\|3311311_3311932_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	8.06706e-10
CP027433.1\|AVM01398.1\|3305359_3306160_+\|histidinol-phosphatase	gnl\|CDD\|238819	cd01641, Bacterial_IMPase_like_1, Predominantly bacterial family of Mg++ dependend phosphatases, related to inositol monophosphatases. These enzymes may dephosphorylate fructose-1,6-bisphosphate, inositol monophospate, 3'-phosphoadenosine-5'-phosphate, or similar substrates.	5.5049e-87
CP027433.1\|AVM01412.1\|3324605_3325304_+\|hypothetical-protein	gnl\|CDD\|133407	cd04780, HTH_MerR-like_sg5, Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily. Putative helix-turn-helix (HTH) MerR-like transcription regulators (subgroup 5), N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	2.44029e-27
CP027433.1\|AVM01404.1\|3314642_3316010_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224157	COG1236, YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis].	1.95568e-106
CP027433.1\|AVM02301.1\|3307018_3308422_+\|butyryl-CoA-dehydrogenase	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	2.84001e-79
CP027433.1\|AVM01409.1\|3320631_3321759_-\|hypothetical-protein	gnl\|CDD\|224594	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms].	8.57461e-23
CP027433.1\|AVM01408.1\|3320154_3320604_+\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	gnl\|CDD\|281995	pfam04075, F420H2_quin_red, F420H(2)-dependent quinone reductase. This family of proteins is found in the genera Mycobacterium and Streptomyces. Member protein Rv3547 has been characterized as a deazaflavin-dependent nitroreductase. Rv1558 is an F420H(2)-dependent quinone reductase involved in oxidative stress protection.	3.50052e-25
CP027433.1\|AVM01410.1\|3321883_3322249_+\|DUF4440-domain-containing-protein	gnl\|CDD\|227327	COG4994, COG4994, Uncharacterized protein conserved in bacteria [Function unknown].	1.14126e-15
CP027433.1\|AVM02304.1\|3326223_3329205_-\|membrane-protein	gnl\|CDD\|234609	PRK00068, PRK00068, hypothetical protein; Validated.	0

>CP027433.1|AVM01405.1|3316040_3316475_-|hypothetical-protein
MTLEIATQVALIAAGVLLLWALLLGVWKFVEITRSPVGQAHVYVDIAHRAALMYSFAAVLLAALVQFSAWPSWVNVTALTVILVFFVGAIASYCLHGWRKDTTNQFHPRDTGLIASTVALIVGEVGGTAVILAGFVVEQARTWS
>CP027433.1|AVM01404.1|3314642_3316010_+|MBL-fold-metallo-hydrolase
MSGLTLTSLGGAGTVTGSKHLLQSGGRTLMVDCGLFQGIKNLREANWRPLPVPADSVDAVVLTHAHLDHTGYLPRLVRDGFAGTVYCTPATRAVAEIILRDSAHIQERDADFLNKRKATKHQPALPLYTGDDVTATLARFQTYPPHTPFTPLPGVEVTFRGAGHILGAATVTVAWAGKTVAFTGDLGRYDDPLMFDPEPIEAADVLVTESTYGDRARDQASPLEAIQRVVAEGIARGGTVLIPAFAVGRTQMILYYLWQLRRAGTVPDVPIYVDSPMAINAGELLPSFPDQHKLDPALTDEMFAIAKYTRDPEESKAISADRSPKIVLSASGMATGGRVLHHLAAFAADPRTTIVLAGYQSVGTRGRSLADGARFLRLYGEWVPVHAHVEDLHMFSAHADCDELIRWMRGFTHGPSHSFIVHGEPQAAESLRMRMRREFDWDATVSVPNRVYSLG
>CP027433.1|AVM01403.1|3314120_3314450_+|resuscitation-promoting-factor-like-protein
MSIKKLAIRTALAGAVTIAPLSAVAATASAAPGHNWDAVAQCESGGNWSINTGNGYYGGLQFSLPTWQANGGSGMPHLNSRSEQIRVAENTLVSQGVGAWPSCGGLLYS
>CP027433.1|AVM01402.1|3311964_3313848_-|propionyl-CoA-synthetase
MGAYLDEFTRSNDDPEGFWLDAAQAIDWIRPPDRALDDANPPIYRWFPGATLNTSYNALDRHVAAGRGDQPALIWDSAMTGQQRTYTYAELLDEVAAFAGALAARGVGKGDRVVVYLPMIPEAVVAMLACARIGAVHSVVFGGFAAPELAARIDDAEPVAVITASGGLEPGRTVEYLPIVETALELASSSPSTVIVKDRAEVAGSAADHGWLDWDQTVAGAEPVAPVEVAATDPLYILYTSGTTGKPKGVVRDNGGHAVALAWSMTNIYDISPGEVWWSASDVGWVVGHSYIVYGPLLAGATTVVYEGKPVGTPDAGAFWRVISEHGVVALFTAPTAIRAIRKADPEAAELAKYPMPSFRTLFTAGERLDPDTFFWAGEKLGVPVVDHWWQTETGWSIVANLRGLEAMEIKAGSPSVPVPGYRVEVVDGEGAPVPAGAEGNIVVRLPLPPGTLAGLWRDEERYRSSYLNAFPGYYLTGDSGYVDSDGYVFVLGRSDDVINVAGHRLSTGSIEAVIAGHPAVAECAVVGIRDDLKGQRPSGYVVLKAGVEIGDDELRADLVKRVREEIGAVATFRDVTVVQALPKTRSGKILRKTMRQIVDGDEYAVPSTIEDPAVLAALAEQLAPKE
>CP027433.1|AVM01401.1|3311311_3311932_+|TetR/AcrR-family-transcriptional-regulator
MSDDRVYGGLSVAERAKDRRARFLAAAVELFGTVGYAATPVPQICRAARLSSRQFYQEFTDREHLLRALYDQIQDHAMEAVATVVLERIGAGDDLDDVLDAGVRAFLAAYDDPRRIRIAFVEVVGVSPALEEYRHARRAGWGELLQTAVQAGTERGLSLGTATPLQWSAYIGAVNAVIVERARESSITDEEIVLAMRTLLRPGILG
>CP027433.1|AVM02302.1|3309890_3311279_+|triacylglycerol-lipase
MAATAVGAAAAVTAGLLAPHAAAEPASPAHQPVKIAPAPAVPLPQELDPRFYEPPRRVVAAAEPGEILAARRITAANFGVVPINVDAWQLSYRSTDSRGEPVAAVTTLLTPRGGTTGPRKIVSMQLAEDSLAGYCSTSYAVQQWSAGALAGQIVVPAELLIAQGMLAQGWAVALPDHQGPKHAYAAGPLGARITLDGLRAAKRFAPLGLDEKSPMGMYGYSGGAIVTGHAAELKQVYAPELNIVGAAAGGVPADLKVVLEAAQNNLTSGLILAAVMGLGREYPYFQRFLDRHTNAEGKVVMALKSPLCVQHQTAVFPFLNNKGFLRWPGDPTDAPAVKRVLRETRMGQRVPDMPMYIWQSRHDQIVPASQTDALVRTYCRDPAARVRYTRDHLSEHLVAEIAGAPLALLWLGDRLDGESAEPGCTTRDELTMATDARWWPTFAGTVGTVIAGLFGEQIGRGK
>CP027433.1|AVM01400.1|3308457_3309675_+|acyl-CoA-dehydrogenase
MPINLELPKKFEANIDQAKQAALQVFRPISRKYDLAEHEYPVELDTLAALYDGLADAGAAGAGAAGGRGDEKKERPDGYVANGGNMSAILNSLWASYGDVGLMLTIPYQGLGNSAIAAVSTDEQLERFGKVWAAMAITEPSFGSDSAAVTTTAQLDGDEYVINGEKIFVTAGSRATHIVVWATVDKSLGRAAIKSFVVPREHPGVTVERLEEKLGIRASDTAVIRFENCRIPKDNILGSPEVDVQKGFGGVMQTFDNTRPLVGAMAVGVARASLEELRRLLEEAGLEIDYDRPAADQPAAVAEFIRLESDWEAGYLHTLRAGWMADNKMPNSLEASMSKAKAGRTGTDVTNKAVELAGTLGYSERTLLEKWARDSKILDIFEGTQQIQQLIIARRVLGKTSAELK
>CP027433.1|AVM02301.1|3307018_3308422_+|butyryl-CoA-dehydrogenase
MTSKTASKDTNSVGSEQHKRSPIGAAMRVLTAVTGSEFADKYKLREPLNRVAYEATKTGFKSLGAANRAFTQKPGGGDPQRPAVQPKGYFNLNPDEEQAMIAETVRDFATEILRPAAYDADNAASAPAEILGRSAELGITMINVPEAFDGAASDRGVVTNALVAEAMAYGDMGLAVPLLAPSGVATTLTNFGSDAQQQTYLPDFAGESVPVSAVVVAEPWPLFDAFNLRTKATRVPSGYRLDGVKSFVPNAGDAELFLVGAMLDGRPALFIVESDTQGLSVEADPGMGLRAAGMGRLILDKVSVPAHAILGAEPGAGSGASGPNDAADSAVDAYSDVVRLSRLGWSALAAGTGKAVLDYVVPYVNEREAFGEPISNRQAVAFMVATMATEVDSIRLVTLRGASRAEQGLSFAREAALARKLTIDKGLQIGLDGIQLLGGHGFTKEHPVERWYRDLRGAGIGEGVVVL
>CP027433.1|AVM01399.1|3306242_3306902_-|MBL-fold-metallo-hydrolase
MLVTSYGHSCVLVELAGSRILFDPGNLSSGFEETTGLDAILITHQHPDHADVAKLPALVAANPDAVRYADPSTATILNDDGSAGQWSVLAPGRRFALGAVTVRGTGGRHAVIHPDIPVVDNTAYILDAPDRPAAFLHPGDSLYIPFEKIDVLALPAAAPWMKLSESVDYLRGAGPRAAFPIHQGIQSDAGRAIHNGRIAEMAPAGTEFVVIEPGFTREF
>CP027433.1|AVM01398.1|3305359_3306160_+|histidinol-phosphatase
MNPPLAAADLDADLALARSLADVADELTSARFGAIDLQIDDKPDLTPVTDADLACERLLRERLEVERPGDAVLGEEFGGDAALPGRQWVIDPIDGTKNFVRGVPVWATLIALLVDGVPVVGVVSAPALNRRWWASAGAGAFATVDDGAPRRLRVSSVGALGSSSLAFSSLSGWADRGIRDRFVGLTDAVWRVRGYGDFWNYCLVAEGAVDVAAEPEVSLWDLAPLDVLVREAGGRFTSLDGTPGPAGGSAVASNGLLHDAALDALR
>CP027433.1|AVM01406.1|3316842_3317457_+|TetR-family-transcriptional-regulator
MARVEASVRSKQLIAAARRILSREGVNRTSLRGVAAEGGVPLGTLQYVFPTREKLLRTVIEDVVGEIAEVVDSSALGGRGLEYGMRHGIRAFWSRLAANRDLQIMQFELTTYSLREPGQQDLARWQYASYTETIAGWCREAAESADEECAIPFEQLGRIIVASIDGLILQYVCDPDDRRAESDLDTVIDMLVAFAAPRPRPLHT
>CP027433.1|AVM01407.1|3317993_3319322_+|amine-oxidase
MTAAQVVVVGAGMSGLVAARQLVRAGLEVVVVEAADRVGGRMLTRTSALGSRLDLGGQWIGAGHRRFTDLADELGTTRFQMHTPKTPVIVDRAGQVLPIASPTVLAAGAAVLAAESAARLPFPTTGTVRSAIDRLPSAGARRLLEVLIEVATTGAPDRLSMDGLTGVISALGGLNSMLRTRGGAQDSLIAEGAGELPERLAAQLTRDRPDRIRLDTRVTAIADDGEGVTVETTTGSIRAARVVVTVPAPMLDGVEFTPPLPDEQQAAIGATAMGSVYKAIAVYPDPFWRKETSATGGHAEFVLLDAPGVATFDSSSPDGPGHLCLLVGGPDAHALDDLTPQARRDLLLNRLVPLLGEQVAAPVDWHERSWHLDDFAGGGYMTLPAPGTRAGHVPLPHAPAARIHWAGTERSESKPGYSYIEGAIAAGERAAGEVISSLSASG
>CP027433.1|AVM02303.1|3319508_3320000_+|ferritin
MKMNEELETAFNKQITMEFESSMLYRQLAIEFELKDLPGIASWMMGHAAEEITHADRLINHLTDRDNHPVIGDIHMPSIKINTVAEAFEVALEAEEKVSESIRNLFRLGQETGDVDSRPTIDWFIAEQVEEEATVREILGRAKLINEDGPGILRLDDELAGKS
>CP027433.1|AVM01408.1|3320154_3320604_+|nitroreductase-family-deazaflavin-dependent-oxidoreductase
MRTPDFAAEAGAWVLEHGHRTLLALTGGRFPTSVMGMLPVELHTVGRKSGRKFATLLTAPVHDDDRIVVVASKGGHSDHPDWFKNAIATPDVDVTVEGVTRPMRARAASAAERAELWPAVVKAYRGYEGYQRNTDREIPLLILEPRPRD
>CP027433.1|AVM01409.1|3320631_3321759_-|hypothetical-protein
MHHDSLLRRVRRAAAVGLALVVAAGLTVPAAGAAPELRCERPGERAAPATVNVDPVRLSAALDYGMQTGAGVVQVYRHGCLIGERRIVGDRQLPVFSASKSVAALVVGRAVAMGHLRVDDRLGAFFPRADAAHRALTVKQLLTQTTGLKYDVVADARGSVTDAVRTALETPVVSRPGTVFHYAQSPLALLAEIVRRATGSDFVDFAARELFGEIGIDRSAWSWRRDARGTPMIAGGLSLRPDDLARFGRLLQARGTYAGARLIDPAFLDEAVRGTAANPGYGYTFWSNRGSRHVNTSGTAVNHPVWNGSPRDTYAMSGAFGQFLVVMPSRGLTIVRMGIPTDASAVEEPASILAGSSNPQFKELFRRVAATPTGP
>CP027433.1|AVM01410.1|3321883_3322249_+|DUF4440-domain-containing-protein
MTGSTAPTLEAVLALERELQTPECRRDRARLDEILSDDFAEIGATGRVWHRDDLIEAISGKSNSSRAPLQMEDLKAQHITDDVVLVNWVSRRGLHTARRSSLWRLTDGRWRLVRHQGTPLP
>CP027433.1|AVM01411.1|3323920_3324529_-|hypothetical-protein
MDSATIFSDMTVTVLASAAVVLLVARLALFIHLHLVRPDLSPRERTVSDLGTGSSRTEFTVMGLLTAAAYVLVLVACVLQGVGPAVPLLALAIGAAAMLVMLCFPADLTGRTRTATGTVHWLLAVVQFTGLYVAMVNLDLTPVLPAEAVGIMRWVVRVSFYAFLAALVLPKLRRRWIGVTERVFLTVTPLWFVVVGAALAVS
>CP027433.1|AVM01412.1|3324605_3325304_+|hypothetical-protein
MKLQELCRRTGTPPSTVKYWLREGLLHPGVKRNATTAVYDDSHLERAQLIHTLRHVVGLPVEQVRAVVSAVDDPGLPPARLMGVVQSAVLGPVSTGTEDARSSDAATPGAGVTGSEIAGVAASDIVAAMSWRAGTADALDALDAELQQMAGWGLAPDLDTALVYARAADSVAKFEMELPPLTGITRDRLAIFVARGVFGYSRLLLRLLAVAQGSAATSAAEATDPGRDTSQA
>CP027433.1|AVM01413.1|3325723_3326011_+|hypothetical-protein
MPHHSTREKSGWHPMAMVAFTTLMVGGCFSALWLYTLAQLPDNKPLNIAYGITALALLTITVAIYTRLTRSLHHSPMLPDHSETELRHYKEHFGH
>CP027433.1|AVM02304.1|3326223_3329205_-|membrane-protein
MGTRGPVGRPTLTRRTKILIAVAVVLLLLLLIGPRVVALWTDLLWYSDLGYSTVMSTMILTRLVVFLIAGLVVGAIVFAAIYAAYRYRPQHLLLTDPNDPLAKYRESVGRRPRLTALVPAILVGLMAGLVAQASWATVQTFLHGESFGVNDPQFNMDIGFYAFTLPFVRLILDLLFLALGVAFVANLLTQYVFGGLRLGGNGRRGSFSGPARIQLAVIAGLFVLAKAVAYWFDRYDLLTGDRRGDIFTGATYTDINYVLPSKLILMVIAIVCALAFFSAIFLRDLRIPALSAVLLLLSALVIGVAWPAAMEQFSVKPSAADKEREFIQRNITATRDAYRIRPDQDITYENWDRTPAEPAKVNSDVATLSNIRILDPNVLDRAFRQRQALRNVYGFPAQLSVDRYEIEGNQRDFLVAARELDPTRLGENQTNWINKHTVFTHGNGFVAAQANKVINEGGSEAERGGVPEFIVADVNTVKAAQEAGRRAPFGVTQPRIYFGELIASSTPDYAIVGSTEGDREYDGGEGTQYTYTADSGVSLSNWGIKLLYAIKYGERNFLLSNALNENSRILYNRDPRDRVKKAAPWLTVDSKTYPAVMADGSIKWIVDGYTTLPKYPYAQRTSLQDATADSRQANSGTTGRAQVNEEVSYVRNSVKATVDAYTGEVTLYQADDTDPVLKTWMKVFPGTVQPKSALDAQPDLRSHLRYPEDLFKIQRSLLTRYHVGDASTFFRADNFWSVPADPASDQDGEQRQPPYYFTASAPNRQNLAQFQLTGSLNFLNRPNLAGYMTANSDPEGYGRLTLKTLPTDTSTVGPTQAGETMRAEPRVQEQTKLLENTRVTYGNLLALPVGGNGLLYVQPIYTEAATGDAAMPKLARVLTYYNAVAGENGATVGISTTLAGALNQVGINPAAVTPAVNADPDDPDAEKDSEQDEATPGTPGQQQSSPERDAAVKRLGTALAGVREAQTSGDLGQLGDALKELDEAIAEYERTGN

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Crispr_ID: CP027433_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027433_15

3397573-3397652

Orphan

Consensus_repeat	Method
GCTAGCGCCTCGCCCGGCTCAACGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027433_15

>merge|CP027433|15|3397573-3397652|CRISPRCasFinder
GCTAGCGCCTCGCCCGGCTCAACGACCGAAGACAAGGCGTTTCGACACGGACTCAGCTAGCGCCTCGCCCGGCTTAACGA

>CP027433|15|14|3397573-3397652|CRISPRCasFinder
GCTAGCGCCTCGCCCGGCTCAACGA	CCGAAGACAAGGCGTTTCGACACGGACTCA
GCTAGCGCCTCGCCCGGCTTAACGA

Protein	Signature genes	Signature genes Name	Protein_function
CP027433.1\|AVM02313.1\|3387409_3387748_-\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM01460.1\|3391849_3392542_-\|phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|223970
CP027433.1\|AVM01463.1\|3396022_3396709_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|223816
CP027433.1\|AVM01459.1\|3391558_3391795_+\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM01473.1\|3406385_3406691_-\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM01467.1\|3401254_3401431_-\|putative-methionine/alanine-importer-small-subunit	unknown	unknown	gnl\|CDD\|293556
CP027433.1\|AVM01470.1\|3404196_3404493_-\|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl\|CDD\|274862
CP027433.1\|AVM01469.1\|3403056_3404025_-\|DUF808-domain-containing-protein	unknown	unknown	gnl\|CDD\|377542
CP027433.1\|AVM01465.1\|3397837_3399334_-\|adenosylhomocysteinase	unknown	unknown	gnl\|CDD\|377487
CP027433.1\|AVM01474.1\|3406683_3407517_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376829
CP027433.1\|AVM01468.1\|3401427_3402969_-\|sodium-dependent-transporter	unknown	unknown	gnl\|CDD\|271366
CP027433.1\|AVM01471.1\|3404601_3404919_-\|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl\|CDD\|274862
CP027433.1\|AVM01458.1\|3390831_3391569_-\|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl\|CDD\|129824
CP027433.1\|AVM01472.1\|3405009_3406389_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
CP027433.1\|AVM01456.1\|3385824_3387294_-\|wax-ester/triacylglycerol-synthase-family-O-acyltransferase	unknown	unknown	gnl\|CDD\|274360
CP027433.1\|AVM01462.1\|3394368_3395979_-\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP027433.1\|AVM01466.1\|3399448_3401053_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129987
CP027433.1\|AVM01457.1\|3387965_3390734_-\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
CP027433.1\|AVM01455.1\|3385297_3385828_-\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM01461.1\|3392590_3394372_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237449

Protein	Function_ID	Function_description	E-value
CP027433.1\|AVM01474.1\|3406683_3407517_-\|hypothetical-protein	gnl\|CDD\|376829	pfam02575, YbaB_DNA_bd, YbaB/EbfC DNA-binding family. This is a family of DNA-binding proteins. Members of this family form homodimers which bind DNA via a tweezer-like structure. The conformation of the DNA is changed when bound to these proteins. In bacteria, these proteins may play a role in DNA replication-recovery following DNA damage.	2.39716e-05
CP027433.1\|AVM01460.1\|3391849_3392542_-\|phosphoribosyltransferase	gnl\|CDD\|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	4.45816e-28
CP027433.1\|AVM01463.1\|3396022_3396709_-\|DNA-binding-response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.70517e-88
CP027433.1\|AVM01467.1\|3401254_3401431_-\|putative-methionine/alanine-importer-small-subunit	gnl\|CDD\|293556	pfam16951, MaAIMP_sms, Putative methionine and alanine importer, small subunit. MaAIMP_sms is a family of hypothetical proteins from Proteobacteria that purported to be small subunits of a methionine and alanine importer.	0.00157806
CP027433.1\|AVM01469.1\|3403056_3404025_-\|DUF808-domain-containing-protein	gnl\|CDD\|377542	pfam05661, DUF808, Protein of unknown function (DUF808). This family consists of several bacterial proteins of unknown function.	8.4156e-145
CP027433.1\|AVM01465.1\|3397837_3399334_-\|adenosylhomocysteinase	gnl\|CDD\|377487	pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hydrolase.	0
CP027433.1\|AVM01468.1\|3401427_3402969_-\|sodium-dependent-transporter	gnl\|CDD\|271366	cd10334, SLC6sbd_u1, uncharacterized bacterial and archaeal solute carrier 6 subfamily; solute-binding domain. SLC6 proteins (also called the sodium- and chloride-dependent neurotransmitter transporter family or Na+/Cl--dependent transporter family) include neurotransmitter transporters (NTTs): these are sodium- and chloride-dependent plasma membrane transporters for the monoamine neurotransmitters serotonin (5-hydroxytryptamine), dopamine, and norepinephrine, and the amino acid neurotransmitters GABA and glycine. These NTTs are widely expressed in the mammalian brain, involved in regulating neurotransmitter signaling and homeostasis, and the target of a range of therapeutic drugs for the treatment of psychiatric diseases. Bacterial members of the SLC6 family include the LeuT amino acid transporter.	0
CP027433.1\|AVM01471.1\|3404601_3404919_-\|WXG100-family-type-VII-secretion-target	gnl\|CDD\|274862	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target. Members of this protein family include secretion targets for the two main variants of type VII secretion systems (T7SS), one found in the Actinobacteria, one found in the Firmicutes. This model was derived through iteration from pfam06013. The best characterized member of this family is ESAT-6 from Mycobacterium tuberculosis. Members of this family usually are ~100 amino acids in length but occasionally have a long C-terminal extension.	5.1147e-08
CP027433.1\|AVM01458.1\|3390831_3391569_-\|ribosome-associated-translation-inhibitor-RaiA	gnl\|CDD\|129824	TIGR00741, Probable_sigma54_modulation_protein_ORF3_ORF95., ribosomal subunit interface protein. This model includes a small protein encoded by one of two genes, both downstream of the gene rpoN for sigma 54, whose deletion leads to increased expression from sigma 54-dependent promoters. It also includes the N-terminal half of a light-repressed protein LtrA of Synechococcus PCC 7002 and the N-terminal region (after removal of the transit peptide) of a larger plastid-specific ribosomal protein of spinach. The member of this family from E. coli is now recognized as a protein at the interace between ribosomal large and small subunits, with about 1/3 as many copies per cell as the number of ribosomes. [Protein synthesis, Translation factors].	3.25614e-25
CP027433.1\|AVM01472.1\|3405009_3406389_-\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	2.83532e-07
CP027433.1\|AVM01456.1\|3385824_3387294_-\|wax-ester/triacylglycerol-synthase-family-O-acyltransferase	gnl\|CDD\|274360	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase. [Unknown function, Enzymes of unknown specificity].	1.65834e-88
CP027433.1\|AVM01462.1\|3394368_3395979_-\|two-component-sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	5.83173e-57
CP027433.1\|AVM01466.1\|3399448_3401053_-\|amino-acid-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.32784e-117
CP027433.1\|AVM01457.1\|3387965_3390734_-\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
CP027433.1\|AVM01470.1\|3404196_3404493_-\|WXG100-family-type-VII-secretion-target	gnl\|CDD\|274862	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target. Members of this protein family include secretion targets for the two main variants of type VII secretion systems (T7SS), one found in the Actinobacteria, one found in the Firmicutes. This model was derived through iteration from pfam06013. The best characterized member of this family is ESAT-6 from Mycobacterium tuberculosis. Members of this family usually are ~100 amino acids in length but occasionally have a long C-terminal extension.	1.75215e-07
CP027433.1\|AVM01461.1\|3392590_3394372_-\|hypothetical-protein	gnl\|CDD\|237449	PRK13616, PRK13616, MtrAB system accessory protein LpqB.	3.69014e-148

>CP027433.1|AVM01463.1|3396022_3396709_-|DNA-binding-response-regulator
MVAMKPRILVVDDDASLAEMLTIALRNEGFEPFVVGDGTQALPAVREVRPDLVLLDLMLPGMNGIDVCRAIRGESGVPIVMLTAKSDTVDVVLGLESGADDYMVKPFKHKELVARIRARLRRQGDEPAELLSIGPVEIDVPAHKVTRDGIPISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYRHPADTRLVNVHVQRLRAKVETDPENPEIVLTVRGVGYKAGPP
>CP027433.1|AVM01462.1|3394368_3395979_-|two-component-sensor-histidine-kinase
MINRRRVNRSLASVQRAAAGVGHAFAAVWSRSLQLRVVVSTLLLSFVVLLIVGFLLISQITGRLLEDKQALALGQLERSRALVERVLTSSNSNTSTATRLTRARALLIDQDTDAAQTTSSAGAYDTVLLVPATRTGEPLASAGPVAEVSEQLREMVGRGQVAYQYSTVQRGGERVPALVVGTPVEAGIPDLELYMIFPMGSEQNTVSLVRSTLMVGGLVLLGLLAAIAWLVARQVVGPLRSASRIAVRFADGRLSERMPVRGEDEFAMLAVSFNDMAESLSKQITHLEEFGGLQRQFTSDVSHELRTPLTTVRMAADMLYEGRDEFDPLQRRSVELLDKELDRFETLLTELLEISRHDAGQAELAAERMDMAIPIEAALATVEPLAAEAGIELIVDLPVEPVLAEIDPRRVERILRNLLANAIDHGEGEPVTLTMRSDGDAVAVTVRDRGIGLKPGEEKLVFNRFWRSDPSRVRRSGGTGLGLAISIEDARLHQGRLEAAGEPGVGSCFRLTLPLVRGHKLLGSPLPLNPNGGSSR
>CP027433.1|AVM01461.1|3392590_3394372_-|hypothetical-protein
MSIRRPTTQPGPFATAAPRGRPRRRGAVLGVLIAALVALTGCVAIPDSSSPQPVEEFSRTVPTNLVPSPGRGDDPETLVRNFVKAMADPADAHRAARRFLTPGGSERWDDQGPKTVLNDLNVVIDERNESAVRLRMVGEKIGVLSPIGQLTPSEGEMVIPLLLTRSGGTWRIEGDVPAGTITDTAQFDSTFRLAELYYPDRTATRLAGDPRWLFGAAIDPTELVRRLLAGPSPDLNGAVETAAGRDVELRGPVVHDGDTITVNLNGLGDADTRSRTVLAAQVIWTLDRAGVRGTYLLNADGGALIPERADGWRTADVMAFDPEPDTGDVPLHVVRDALLRVTATGTAPVGGPLGTANDLVAAAISANQARVAAVAARAGRQVLLQGLYGGGVSEVTSGEEITSPSFGATTDTGFALVDGRPIQWTAAAEGPGARVVPLDVSQVAEVDDGPITSFKVSPDGVRAALVVGGRVLLAALATNDRGVPALTGAYVAAYGIDAPVVSIAWGGVTTIYLARAGIDAPVMRIPVSGQPAVELVSGNLKPPVRSVAATRSKVYAADSRTVMELGTAPGSPDQYWTEAGDVGDGAVPVTQAG
>CP027433.1|AVM01460.1|3391849_3392542_-|phosphoribosyltransferase
MVGGLREVLAAALELALPLECGGCGRPGDGWCARCAAAVHDDPVVLSPRVALPVPAWGMGRYRGPLRGAVVGVKEHRRTDLVPVLGGVLARGLVTLARWEAYPPARRLVLVPAPTRAWAARRRGGDPVTAIARAAAAALGPRVTVVPALRTAGWTRDSAGLTAGARLANLSGAVSVPGDVPPWVLRAPAGAVTTLLIDDVLTTGATAATAVRALRSRGVGVAGVAVLATA
>CP027433.1|AVM01459.1|3391558_3391795_+|hypothetical-protein
MTVIDYLLRSLRLGRAPTPKVIRLPHKGFARLIRQRIPQHRRVILTGLDEPQRRAKDPHLLHLMFITVPSDVILFAAA
>CP027433.1|AVM01458.1|3390831_3391569_-|ribosome-associated-translation-inhibitor-RaiA
MTVIHRKGQREPKGPAPTAAEISGAFERPAHVQEVSEPAQPNAEVVYNGRNVVIPDHFRLYVGDKLARLERFDPSITRFEVVLYHEPNRRLQKQAQVVEVTARCDGPVVRAQASGENFYAATELVADKLQKQLRRANARKRIRKNGPGRPVSLAEATAPGALVDDPSPETLDEAEARWDDGVEPYEPGQVVRIKDHDAVPMTVDDALYEMELVGHDFFLFQDKETDKPSVVYRRHAFDYGLIRLA
>CP027433.1|AVM01457.1|3387965_3390734_-|preprotein-translocase-subunit-SecA
MLNKLLRLGEGRMVKRLDAIAAQVGALEGDIEALTDDELRAKTQEFKDRLDDGETVDHLLVEAFAVAREAAWRVLDQKHFHVQIMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNALEGNGVHVVTVNDYLAKRDAEQMGRVHRFLGLQTAVILTGMTPDQRRVAYQADITYGTNNEFGFDYLRDNMAHSLEELVQRGHHFAVVDEVDSILIDEARTPLIISGPADSSSKWYTEFARIAPKLEKDTHYEVDIKKKTIGVHEAGVTLVEDRLGIDNLYEPANSQLVSYLNNAIKVKELFHRDKDYIVRNGEVLIVDEFTGRVLDGRRFNEGLHQAIEAKEGVEIKAENQTLAQITLQNYFRLYEKLSGMTGTAETEAAEFQQIYKLGVVPIPTNKPMIRKDQSDLIYKTEEAKFAAVVDDLAERHEKGQPALIGTTSVERSEYLSRLLKERGIKHSVLNAKYHEQEAQIIAEAGRLGAITVATNMAGRGTDVVLGGNAEVIADVRLRKAGLDPVNTPDEYEAAWEDAIKVAREQAADEAKDVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNAAALDAIMTRFNLPDDVPIEAKMVTRAIRSAQTQVEEQNFEIRKNVLKYDEVMNEQRKVIYAERREILEGENHREQILQMVADVVGAYVDGATVEGYAEDWDVDELWTALGNLYPISLDAKTVFSENEFGEREDLGRDELRELVVADALEAYERREEELAAIGGEDAMRQLERSVLLSVLDRKWRDHLYEMDYLREGIHLRSMAQRDPVVEYQREGYDMFMGMLEGMKEETVTLLFHAQVQAAAPEPSLGTSVSDMLAGSGLTADPEDADAPLTYSGPSEDGTPEILSQVEELASGTPAEVLDGRRSAPEPVVGSRKERRAAERRNRRRK
>CP027433.1|AVM02313.1|3387409_3387748_-|hypothetical-protein
MQTATAARACAVVALARTLEVLDGRRPRGLLAGDVDETVLTQIGAMLQRGVAAEAAECARLLRVHVQLRSASSAEFFGSFERGPRVRACAGRLERRTRRGAERWVIAEFAIL
>CP027433.1|AVM01456.1|3385824_3387294_-|wax-ester/triacylglycerol-synthase-family-O-acyltransferase
MVNRLSPDDAMYYFLDGSGRTTHLGTLLILDPAQAPTGQPRLDYSRLTATVENRLQRLPRYRQVVTEVTLGLARPLWVDDPDFDITFHIRLSALPQPGGDDQLQELVARVISRPLDRDRPLWEMYLIEGLSGGRLAILTKTHRCLLGGDRCEISEVITDETPESPRLPDALWMPGARPGRRSVTIGALTEAMARPGELVDSIFRGSGPIADLLTLADRSARFVGSTVQQLVNTAPDSPLNSGATSARLFTFASVSRAECLTIAERFECSFNDVVLGIITGVMRRWTLSVKDSIGHGETVRAVLPLGAREPVADSGGEGGWICVGRAEFVTDLPVGEDAPAVRLMQVAGLADRYSQSPRRLTPGLRPMLPELGVVPLADLSTRVFNSLFQRSYNVPISMGGRRIAERYVVGVPVVSLYTVPSLSGQRALAISVNEYRDDVEFAFLADRNVVGDLPAMAGYVRDSIEELRTGGFPQRPATGRPHDDGGADS
>CP027433.1|AVM01455.1|3385297_3385828_-|hypothetical-protein
MRVYLPATLAGVQRLVDDGRWMPLGGTGFALTPGLREAYTAGDDEELSEVALREAARASLRLLAADGLESTPSAVVDGGQALPVRRVVVVAEVPEATPRPDLDDAVVKVSGPVAMDQVVAVHVDGAEAEPAVRTAAACVDAADLGDEDAELALGDAEDHDLGWYATQELPFLLELL
>CP027433.1|AVM01465.1|3397837_3399334_-|adenosylhomocysteinase
MTALTADVRNGIDYKVADLGLAEYGRKEIRLAEHEMPGLMDLRREYHDVQPLKGARISGSLHMTVQTAVLIETLVALGAQVRWASCNIFSTQDEAAAAVVVGPNGTPEEPQGVPVFAWKGESLEEYWWCADQMLTWPTAGSAAGGVKVADGPANMILDDGGDATMLVLRGAEFEKAGVVPPTDDDYSAEYKVFLSLLRKSLAEDAGKWSRIAESVQGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSKFDNKYGTRHSLIDGINRGTDVLIGGKKALVCGYGDVGKGCAESLAGQGARVQVTEIDPINALQALMDGFDVVTVEDAIGDADIVITSTGNKDIILFEHMEKMKNQAILGNIGHFDNEIDMAGLESADGMTRINIKPQVDQWVFPDGHSIIVLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKNDEYDNEVYRLPKHLDEKVARIHVEALGGSLTKLTKEQAEYIGVDVEGPFKPEHYRY
>CP027433.1|AVM01466.1|3399448_3401053_-|amino-acid-permease
MGNPFLRVKSVEQSVADTDEPGTRLRKDLTWWDLTVFGVAVVVGAGIFTLTARTAGNVAGPSVSLAFVLAAIACGLAALCYAEFASTVPVAGSAYTFSYATFGEFVAWIIGWDLILEFALAASVVSKGWSHYLNEFLCLITGADPSETSYTVIAWGDPGGAFGGFDWGAVLLISVLTLLLALGTKLSSMVSLVITAVKVAVVLLVIVVGAFYISPKNYSPYIPPAEDAASDGASGLHQTLFSLMTGAGGSTYGWYGLLAAASLVFFAFIGFDIVATTAEEARDPQKDLPRGILGSLAIVTVLYVAVTLVLTGMVSYTELRGDNATLATAFGLHGIAWAQWLIVIGALSGLTTVVMVMLLGQTRVGFAMSRDGLFPRGLAKTGSRGTPVRITVLVGFVSAFLAGFLPMGELEEMVNIGTLFAFVLVCIGVIVLRKTRPDLTRGFRVPLVPLVPVLAVAACLWLMINLSALTWIRFLIWMALGVVVYLVYGMRHSVLGMRERGETPPLLDALDLAGPRVPQVRAEAGDDDPPPSSR
>CP027433.1|AVM01467.1|3401254_3401431_-|putative-methionine/alanine-importer-small-subunit
MSAAAVVVMIIAMVLLWGGLGAVIMFLRARPETGLVEPSDLLAQDEAREQQPHPTRDT
>CP027433.1|AVM01468.1|3401427_3402969_-|sodium-dependent-transporter
MTDTAAANPERQTWTSNRGFILAAIGSAVGLGNIWRFPGVAYESGGGAFLIPYLIALFTAGFPILFLDYAIGHRYRAAAALALRRLWRKAEVIGWFQTALLFIISVYYAVVIAWAMSYFYFSFGTKWGDDTQTFFLSDYLQVGEPGVSAQLVSGVALPLVIVWVLIIVVLALGIAKGIEKVNVIGIPLLVLGFGALVIRAVTLPGATDGLNELFTPQWSELTNLSVWIAAYSQIFFSMSIAFGIMIAYASFQRRKANMTSSGLVVGFANSSFELLAGIGVFSALGFLAHQSNIRFAELEGITGPTLSFITFPKIVSEMPGSWFFGAVFFGSLVIAGFTSLVSLVVGVSVGMQEKFGLSQRTAAVGVGIVSALVSFGLFATTTGLIALDTVDQFANNIGVVGSAIIMCVTVVWIARRGPLLRDHLNAVSTFKLGNTWLVLIGVFAPLALLVMLIDKVMGLVKDGYEGYPDWYVNTFGWGTIVLAVVFAIVMTVLSWNGRDESFQPWPPLKGDER
>CP027433.1|AVM01469.1|3403056_3404025_-|DUF808-domain-containing-protein
MAGGLAALLDDVAALARLTAASIDDIGAAAGRASTKAVGVVVDDAAVTPRYVQGIEPARELPIIAKIARGSIRNKLVFILPAIMLLSEFASWALTPLLMLGGTYLAFEGAEKIWEKLTGHGAHAEAPAAQVGGDQEKKLVGGAVRTDFILSAEIMVIALSEVASEGLWMRLGALIVVAVVITALVYGVVAVIVKMDDVGLAMARRNSAVSRRVGRSLVSAMPMLMTALSYVGVVAMLWVGGHILLGGVHDLGWHWLYDLVHHLEVAAADASPVAGGFVGWLVNTFFSAVLGFLVGSVVVAIVHQVRPHKPAGADHSDPEPAS
>CP027433.1|AVM01470.1|3404196_3404493_-|WXG100-family-type-VII-secretion-target
MSGGTIRYNFANLGTLAGDLKNQFGRLEELSGQLKRQVNMLAANWESGGAADYQLAQADWDRIFTDARLRLNGLGAGVAKASSRMHETDVRVGKSFAT
>CP027433.1|AVM01471.1|3404601_3404919_-|WXG100-family-type-VII-secretion-target
MSGGGLNLDVAAGQAATSSIKGIVGDMRAVIGKIKASAASGLTDWQGNAAKSFDGTHTDWHATAVRLEQALNVIEGKLTSGFRGYDDADGTAATVIVNSAGGLDL
>CP027433.1|AVM01472.1|3405009_3406389_-|hypothetical-protein
MSGAATAELTLGELLAPTGLPALLEQTPTQLLAGLGVDRRLLGQPGPGGVDRAALGPNAGDSASADPSPLLVPPGLPDLPALPALDPLALLAPVAELLSTFGSGVLPGGPGDPAAMLTGLSQVLETGAGAAASAAQALSGLWSGQSGAAATGKSAQSAVNAGALATQGAAMAADIQGGLVIVGAGLAALQGIIVKTAGLISAALPAIMTPPGQLAALGFAAEGLTEAMAVVAATRAQLAAPTAKMAVDGAPVPVTPPPVTPAQLSGLLHAALPLVSSGMQLAGTLLASSPTSPAAPTSPGAPLPAGTVPATVTPTPSPAAPGTGTGSLGANQAGTVPGGNGGAPTVRPAGLGAMPSAPAAEPVLGQRPVSAEPSAGVAPSPASTAPGWARSGAAPVAGPLAPLAPVVAAPAGPRTGEAVRTTFEVGGAAATVTPVLGEAAAPPVTVDVDFLLVQPDSPA
>CP027433.1|AVM01473.1|3406385_3406691_-|hypothetical-protein
MSELTVAAEAVQTFAAASAALSAATAAAGAADATAQTAVMTGAFGLIGQEFLAAFAVAQANHLSSVGALAAVHAATASAASAGLAAFTGADLDAATAVATS
>CP027433.1|AVM01474.1|3406683_3407517_-|hypothetical-protein
MREMEPDRAAARPSTKGPPSGTSSGGRATRREATAREPDGPVLRLTLHEAHSSTGAGRAVRSGIRSCRLALRGPGGHHDGGRSARRNADRAVAAVGESGRGGRPDLGAVRAGARRDGPSAPPGTRRAGDAAGRARCTGSPRPGCGGTAGGSGRPLVPRRGARMTSAMDQITARAQARLAALQHAHRELAGVSATASADDGRVVVRVDASGGLADLTLRPGAARGDATRLAAVITETAATAARDVAQRRADLTREFLDEFGDPPDGEAVEHTDRGNDE

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Crispr_ID: CP027433_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027433_16

3426408-3426497

Orphan

Consensus_repeat	Method
AGCCCCGTTTCGTGTGACCACATCTCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027433_16

>merge|CP027433|16|3426408-3426497|CRISPRCasFinder
AGCCCCGTTTCGTGTGACCACATCTCGGCAACAGCGAGCGGACCTTCACTCCCGCCACACCGAGCCCCGTTTCGTGTGACCACATCTCGG

>CP027433|16|15|3426408-3426497|CRISPRCasFinder
AGCCCCGTTTCGTGTGACCACATCTCGG	CAACAGCGAGCGGACCTTCACTCCCGCCACACCG
AGCCCCGTTTCGTGTGACCACATCTCGG

Protein	Signature genes	Signature genes Name	Protein_function
CP027433.1\|AVM01503.1\|3437812_3438163_+\|cupin	unknown	unknown	gnl\|CDD\|380358
CP027433.1\|AVM01494.1\|3424783_3425182_-\|50S-ribosomal-protein-L18	unknown	unknown	gnl\|CDD\|235524
CP027433.1\|AVM01500.1\|3435130_3435838_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	unknown	unknown	gnl\|CDD\|225091
CP027433.1\|AVM01497.1\|3427762_3428782_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|187759
CP027433.1\|AVM01496.1\|3425737_3426136_-\|30S-ribosomal-protein-S8	unknown	unknown	gnl\|CDD\|234658
CP027433.1\|AVM01498.1\|3428900_3432662_+\|nitrate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|227346
CP027433.1\|AVM02316.1\|3419333_3420521_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|172015
CP027433.1\|AVM01502.1\|3436589_3437816_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225133
CP027433.1\|AVM01493.1\|3424077_3424737_-\|30S-ribosomal-protein-S5	unknown	unknown	gnl\|CDD\|234790
CP027433.1\|AVM01495.1\|3425185_3425722_-\|50S-ribosomal-protein-L6	unknown	unknown	gnl\|CDD\|235495
CP027433.1\|AVM01505.1\|3440858_3443249_-\|phosphoenolpyruvate-synthase	unknown	unknown	gnl\|CDD\|235809
CP027433.1\|AVM01490.1\|3421854_3423192_-\|preprotein-translocase-subunit-SecY	unknown	unknown	gnl\|CDD\|236412
CP027433.1\|AVM01491.1\|3423449_3423893_-\|50S-ribosomal-protein-L15	unknown	unknown	gnl\|CDD\|235523
CP027433.1\|AVM01488.1\|3420504_3421302_-\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
CP027433.1\|AVM01501.1\|3435834_3436593_+\|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl\|CDD\|376889
CP027433.1\|AVM01492.1\|3423892_3424075_-\|50S-ribosomal-protein-L30	unknown	unknown	gnl\|CDD\|180163
CP027433.1\|AVM01499.1\|3432661_3434332_+\|nitrate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|224063
CP027433.1\|AVM02317.1\|3426781_3427726_+\|hypothetical-protein	unknown	unknown	unknown
CP027433.1\|AVM01489.1\|3421309_3421858_-\|adenylate-kinase	unknown	unknown	gnl\|CDD\|234711
CP027433.1\|AVM01504.1\|3438272_3440792_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP027433.1\|AVM01503.1\|3437812_3438163_+\|cupin	gnl\|CDD\|380358	cd02230, cupin_HP0902-like, Helicobacter pylori HP0902 and related proteins, cupin domain. This family includes prokaryotic and archaeal proteins homologous to HP0902, a functionally uncharacterized protein from Helicobacter pylori and Spy1581, a protein of unknown function from Streptococcus pyogenes. These proteins demonstrate all-beta cupin folds that cannot bind metal ions due to the absence of a metal-binding histidine that is conserved in many metallo-cupins. HP0902 is able to bind bacterial endotoxin lipopolysaccharides (LPS) through its surface-exposed loops, where metal-binding sites are usually found in other metallo-cupins, and thus may have a putative role in H. pylori pathogenicity.	3.92455e-14
CP027433.1\|AVM01494.1\|3424783_3425182_-\|50S-ribosomal-protein-L18	gnl\|CDD\|235524	PRK05593, rplR, 50S ribosomal protein L18; Reviewed.	1.29083e-55
CP027433.1\|AVM01500.1\|3435130_3435838_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	gnl\|CDD\|225091	COG2180, NarJ, Nitrate reductase delta subunit [Energy production and conversion].	5.06013e-37
CP027433.1\|AVM01497.1\|3427762_3428782_-\|hypothetical-protein	gnl\|CDD\|187759	cd09319, TDT_like_1, The Tellurite-resistance/Dicarboxylate Transporter (TDT) family. The Tellurite-resistance/Dicarboxylate Transporter (TDT) family includes members from all three kingdoms, but only three members of the family have been functionally characterized: the TehA protein of E. coli functioning as a tellurite-resistance uptake permease, the Mae1 protein of S. pombe functioning in the uptake of malate and other dicarboxylates, and the sulfite efflux pump (SSU1) of Saccharomyces cerevisiae. In plants, the plasma membrane protein SLAC1 (Slow Anion Channel-Associated 1), which is preferentially expressed in guard cells, encodes a distant homolog of fungal and bacterial dicarboxylate/malic acid transport proteins. SLAC1 is essential in mediating stomatal responses to physiological and stress stimuli. Members of the TDT family exhibit 10 putative transmembrane alpha-helical spanners (TMSs).	1.07194e-44
CP027433.1\|AVM01496.1\|3425737_3426136_-\|30S-ribosomal-protein-S8	gnl\|CDD\|234658	PRK00136, rpsH, 30S ribosomal protein S8; Validated.	1.46174e-83
CP027433.1\|AVM01498.1\|3428900_3432662_+\|nitrate-reductase-subunit-alpha	gnl\|CDD\|227346	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion].	0
CP027433.1\|AVM02316.1\|3419333_3420521_+\|glycosyltransferase	gnl\|CDD\|172015	PRK13375, pimE, mannosyltransferase; Provisional.	1.62529e-48
CP027433.1\|AVM01502.1\|3436589_3437816_+\|MFS-transporter	gnl\|CDD\|225133	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism].	9.91533e-84
CP027433.1\|AVM01493.1\|3424077_3424737_-\|30S-ribosomal-protein-S5	gnl\|CDD\|234790	PRK00550, rpsE, 30S ribosomal protein S5; Validated.	2.35435e-94
CP027433.1\|AVM01495.1\|3425185_3425722_-\|50S-ribosomal-protein-L6	gnl\|CDD\|235495	PRK05498, rplF, 50S ribosomal protein L6; Validated.	5.52197e-113
CP027433.1\|AVM01505.1\|3440858_3443249_-\|phosphoenolpyruvate-synthase	gnl\|CDD\|235809	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated.	0
CP027433.1\|AVM01490.1\|3421854_3423192_-\|preprotein-translocase-subunit-SecY	gnl\|CDD\|236412	PRK09204, secY, preprotein translocase subunit SecY; Reviewed.	0
CP027433.1\|AVM01491.1\|3423449_3423893_-\|50S-ribosomal-protein-L15	gnl\|CDD\|235523	PRK05592, rplO, 50S ribosomal protein L15; Reviewed.	8.4243e-67
CP027433.1\|AVM01488.1\|3420504_3421302_-\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	1.28044e-132
CP027433.1\|AVM01501.1\|3435834_3436593_+\|respiratory-nitrate-reductase-subunit-gamma	gnl\|CDD\|376889	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit. This family is the gamma subunit of the nitrate reductase enzyme, the gamma subunit is a b-type cytochrome that receives electrons from the quinone pool. It then transfers these via the iron-sulfur clusters of the beta subunit to the molybdenum cofactor found in the alpha subunit. The nitrate reductase enzyme, EC:1.7.99.4 catalyzes the conversion of nitrite to nitrate via the reduction of an acceptor. The nitrate reductase enzyme is composed of three subunits. Nitrate is the most widely used alternative electron acceptor after oxygen.	1.05047e-111
CP027433.1\|AVM01492.1\|3423892_3424075_-\|50S-ribosomal-protein-L30	gnl\|CDD\|180163	PRK05611, rpmD, 50S ribosomal protein L30; Reviewed.	5.10619e-24
CP027433.1\|AVM01499.1\|3432661_3434332_+\|nitrate-reductase-subunit-beta	gnl\|CDD\|224063	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion].	0
CP027433.1\|AVM01489.1\|3421309_3421858_-\|adenylate-kinase	gnl\|CDD\|234711	PRK00279, adk, adenylate kinase; Reviewed.	1.55557e-95

>CP027433.1|AVM01496.1|3425737_3426136_-|30S-ribosomal-protein-S8
MTMTDPIADFLTRLRNANSAYHDEVTLPSSKIKVNIAEILKREGYITDFRVEDAEVGKKLTVTLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPKVLGGLGVAIISTSSGLLTDRQAANQGVGGEVLAYVW
>CP027433.1|AVM01495.1|3425185_3425722_-|50S-ribosomal-protein-L6
MSRIGKNPIAIPAGVDVTVDGQAVKVKGPKGELSLTVTEPITVAVEDGSIVVTRPNDERRNRALHGLNRSLIANLVEGVTQGYTTKMEIFGVGYRVQAKGKDLEFALGYSHPVPIEAPEGITFAVESPTKFSVSGIDKQQVGQISANIRRLRRPDPYKGKGIRYEGEQIRRKVGKTGK
>CP027433.1|AVM01494.1|3424783_3425182_-|50S-ribosomal-protein-L18
MSEATIDRTPVGKDASTRRRTATKRRHFRLRKKVNGTAERPRLAVKRSSRHIHVQVIDDLTGRTLAAASSIEADVRAAGGDKTAQAAKVGELVAQRAKAAGIETVVFDRGGKAYHGRIAALADAAREGGLAF
>CP027433.1|AVM01493.1|3424077_3424737_-|30S-ribosomal-protein-S5
MPGRQRDGGNGPAGANNSNDNRGERRGRGDRRDSRGGRGEREERNHLERVVTINRVSKVVKGGRRFSFTALVVVGDGQGMVGVGYGKAKEVPAAIQKGVEEARKSFFRVPMIGGTVTHPVQGEAAAGVVMLRPASPGTGVIAGGAVRAVLECAGVTDVLAKSLGSDNAINVVHATVEALKSLQQPEEVAARRGLSVEEVAPAGMLRARAAAAAAATEGK
>CP027433.1|AVM01492.1|3423892_3424075_-|50S-ribosomal-protein-L30
MAQLKITQIKGTIGTKKNQRDSLRTLGLKGIRKSVTREDTPINRGLINVVRHLVTVEEVK
>CP027433.1|AVM01491.1|3423449_3423893_-|50S-ribosomal-protein-L15
MSAIKLHHLRPAPGAKTEKTRVGRGEGSKGKTAGRGTKGTKARKNVPAGFEGGQMPIHMRLPKLKGFKNRNRVEYQVVNVGDIARLFPEGGTIGVAELVAAGAVRKNRLVKVLGNGELNVKVDITADKFTGSAKEKIAAAGGTATEQ
>CP027433.1|AVM01490.1|3421854_3423192_-|preprotein-translocase-subunit-SecY
MLSSVVATFRTPELRKKIFFVLFILVLYRLGATLPSPGVDFREINRCVDAAAQGDSAQIYSLINMFSGGALLQLSVFAIGIMPYITASIIVQLLTVVIPRFEQLRKEGQSGQAKMTQYTRYLTVALALLQATGIVALAANGRLLPASGTDCDPTAILHNSDNLWVLVIMVLVMTAGACLVMWFGELITERGVGNGMSLLIFAGIAARLPAEGRNILNGRGGLIFGLVCGAALVILLAVVFIEQGQRRVPVQYAKRMVGRKMYGGSSTYIPIKVNTAGVIPVIFASSLLYIPQLVISLTQGETEVSGWKLWIQTNLVDPGSMWHIATYFLLIIFFTYFYVAVTFNPEERADDMKRYGGFIPGIRPGKPTADYLSFVLSRITLPGSLYLGIIAILPNLFLEIGNNNSEVANLPFGGTALLIMVGVGLDTLKQINSQLMQRKYEGFLK
>CP027433.1|AVM01489.1|3421309_3421858_-|adenylate-kinase
MRLVIVGPPGAGKGTQAELLSEALGIPHVSTGDLFRANISEGTPIGLEAKKYLDSGNLVPSEVTVSMVRDRLNEPDAAKGFLLDGFPRSVEQAQALGGILADLGTELNGVLSIVVDEDAVVGRMLARGRADDTEDVIRNRMHVYNEETAPLLAFYADDIIEVDGMGEIADVQQQILAKLGKA
>CP027433.1|AVM01488.1|3420504_3421302_-|type-I-methionyl-aminopeptidase
MVRFRKRKVVPFRSAGELDAMAAAGAIVGAALVACRAAARPGVSTLELDEIAETVIRDAGAVPSFKGYHGFPGSICSSVNDVVVHGIPSSSTILAEGDLVSIDCGAILDGWHGDSAWSFGVGALSTEDEELSEATRLSLEAGIAAMIEGNKINDVSRAIEAGTRAAERKFGRRFGIVDGYGGHGIGREMHMDPFLANEDNPGRGKEILVVGSTMAIEPMLTLGGPDTSVLDDDWTVVTDDGTRAAHWEHTVAVTDDGPRILTLRP
>CP027433.1|AVM02316.1|3419333_3420521_+|glycosyltransferase
MVLAAMALTLSTAVGLMLGVWKGYLDLMVYRLGAQTWLDGGDLYGPLPPIGDIYLPFTYPPLAAIAFAPLAILPAGAASTVMFGLSLAAIGLTVWLVLDRVAPALDRGRRLALVLVIVALAEYLEPVRETLSFGQVNALLMAAVAYDVLNRRQRWPRGVLIGIAISIKLTPAGFLLLFLLRRDWRAFATTILAALASIVVAWAVTPSDSRQYWFSTLAETGRIGAPYFAGNQSLKGLAFRAGLGETAATALWLALSVIAVALAAIWMRRLLADGDVLTALLVNAAAILLVSPVSWTHHWVWAVPALVVAVAALAHRNRGPGFAAAVAFAVVLFYVGPHWLLPSRKDRELDWGWWQQLIGGLYPLFTFGVLIAGATWALRSAPAAPRAGEAATAAA
>CP027433.1|AVM02317.1|3426781_3427726_+|hypothetical-protein
MATRAQLLVAGVPSSYIRRKLRRKEWTVHRRGVYVAHNGPPTWQQRAWIATLATTPSALSHQCAIRAAGGPIGSAHDDAPIHIAVPDRRHLPERAGVVIHYRGRLTERALLHASPPRLRVEHAYLELAAEADDDTGAVAHLTAAVQSRLTTAGKLITALESRPTLPRRAFLLGVLHDAARGACSVLEHAYLTGVERAHGLPEPVRQAPTTVGRRGFRDLDYPDWGLVIELDGRLGHDDAASRTRDFERDLDAAVGARRRTVRLCHAQATRLRCTTAAKVGALLRAGGWPGAPTPCSTTCPIAASRPRTPPAVTR
>CP027433.1|AVM01497.1|3427762_3428782_-|hypothetical-protein
MRLEHFTFVMATGIVATGVRNSGADLLSWILFWVASAGYAVLVIGTLAGLAAGQWGIRREFSERACRTLAFVAAGGVLSAYATGRGWTVFALVLIVVSGVAWIAMQYAVVGALVVRAGASRRPRDLTVFDGTWFLLVVSTQAMAVSLGAWSRAADCDLGATAAVLFWGLGVLQLVIVACLVADRLLRAGVKAADEVSPYWVFLGSGAISILAAAEVLGTREEQVVMPQAVVGGVAMALWAFVTWMIPLTVALQLWQAGRPGAIRGYRPALWAMVFPIGMYGEATRQLGYIRGDRWLTELGRWESWPAFAVWLAVFAGLVLTVVRIAAGRAARHPSSFRW
>CP027433.1|AVM01498.1|3428900_3432662_+|nitrate-reductase-subunit-alpha
MAGTPKTQGDAAQALLDVGRFFTRWDETADKRAVFRDGGRAGDVFYRDRWSHDKIVRSTHGVNCTGSCSWKVYVKDGIITWETQETDYPSVGPDRPEYEPRGCPRGAAFSWYTYSPTRVRHPYARGVLVEMYRQAKATGKDPVEAWADVTGDPLRRRAYQRARGKGGLVRVSWDEAIEMAAAAHVHTIKTYGPDRCAGFSPIPAMSMVSHCVGTRFMQLIGGVMTSFYDWYADLPVASPQVFGDQTDVPESGDWWDATYLMMWGSNVPVTRTPDAHWMAEVRYRGTKVVTVSPDFADNTKFADEWLPAQAGTDGALAMAMGHVILKEFFVDRSTEFFTDYVRKFTDLPFLVALDEQSHDGERTLVPGKFVTADQVDSGLGSGTASGPNSLGGQHPEDEWKPVLLDDDSGSVIVPNGSMGFRYAESGAGRWNLDLEGVTPRLTLHDDPEATAVQISIPAFDDPDGSGSVLRRGVPARRIGDRLVTTVFDLMLAQYGVGRDGLPGDWAAGYDDAGTPYTPAWQEEITSVPAEAAIRVAREFATNAVESQGRSMIIMGAGICQWFHGDVTYRAILALLNLTGSMGRNGGGWAHYVGQEKCRPITGWISLANALDWSRPPRTQPGTSYWYMHTDQWRNDGYSTTALASPLSKGVLDHPHTADAIAQSARMGWMPFYPQFSVNPLQVADEAKAAVDAGEAASPGAYVAQKLYDGELTPSINDVDAPENWPRTLVLWRSNLLGSSAKGDEYFLRHLLGTQHNVLGTEHPETPHPREVRWHEEAPEGKLDLLLSADFRMTSTTLMSDIVLPAATWYEKHDLSSTDMHPFVHAFTPAIDPPWEAKSDFELFHALAQELSRQAEKHLGTVHDIVATPNQHDTPGETANPHGIVDDWLDGDAPGVPGKNLPQFVVVERDYTAIADKLASVGPLADKLGFTVKNITFDIGSQTAKLAANNGVMFGGSPAADGRPAIDTDEKLAEAILMFSGTTNGELAVDGFEKLERTTGKTFVDLAAGSEEKRITFADTQDSPQPVITSPEWSGSETGGRRYAPFTMNVERDKPFHTLTGRMHFYLDHDWMLDIGEALPIYRPPLDMHRLFGEPRLGPTGEMEIAVRFLTPHNKWSIHSEYQDNLFMLSLSRGGPTAWLSPEDAGAIGVIDNDWIECVNANGVFVGRAVVSHRIPAGITYVHHAQERTIDVPKSEATGKRGGIHNSVTRLLVKPSHLIGGYAQLSYAFNYLGPTGNQRDIVSIIRKRSQEVTY
>CP027433.1|AVM01499.1|3432661_3434332_+|nitrate-reductase-subunit-beta
MRVMAQVAMVMNLDKCIGCHTCSVTCKQAWTNRAGTEYVWFNNVETRPGQGYPRRYEDQEKWKGGWRLNRREQLRLRTGGRLQKLATIFASPVQPTLADYYEPWTYDYENLISAPLGDDIPVARPKSLITGEDMKITWSANWDDDLGGSAATEELDPIMQKLRDEAADKITFSFEQTFMFYLPRICEHCLNPSCMASCPSGAIYKREEDGIVLVDQDRCRGWRQCITGCPYKKIYYNHRTGKAEKCTFCYPRIEVGQPTVCSETCVGRLRYIGLFLYDADAVTAAASVPDERDLYEAQLELMLDPADPKVLAAARAEGIPDDWIDAARRSPVYALAKKYRVALPLHPEYRTMPMVWYVPPLSPIVDLLTEQGHDGESHDNLFGAIDTLRIPLEYLAELFSAGDVSVVEDVLKKLAAMRSYMRDVALGREPDARIPARVGMDEESMTEMYHLMAIAKYADRYVIPTAHAEEGHRLEEMACSLDYDDGPGMYESGPFGEASGRATPVSVETFQALKQRQTTDRAADATALRDRVNLLNWDGNGSPVSRSSSEVEARDA
>CP027433.1|AVM01500.1|3435130_3435838_+|nitrate-reductase-molybdenum-cofactor-assembly-chaperone
MSLFRRPNRATSDRESRVIYQIASLCLQYPDETLLAQAGLLHDALAGQPDSASTRALTRFAGHLDTTDPDVLRESYVRDFDLSRHQTLYLTYWSDGDTRRRGSALAAIKQTYRESDFLVDTHGELPDYLPMVLEFAARVNPETGRMLLIEHRASLELIRIALQEKDSPYADVLAAVCATLPGDSPADKATAQSMRTSSPAVERVGLEPGDPRLLPLFTSKEMSMMTGPKRTGAPR
>CP027433.1|AVM01501.1|3435834_3436593_+|respiratory-nitrate-reductase-subunit-gamma
MSLFLWGVVPYLALIAVIGGTIWRFKYDKFGWTTRSSELYESRLLRIGSPLFHYGILLVIVGHAIGLVIPESWTHAIGISEDMYHWVAAVGGIIAAIAALVGVAILIYRRRTTGPVFAATTNNDKLMYVMLVAAMIAGTYITVVGMIDPHGPGVNYRETVAPWFRSIFVLQPDIHAMDAAPLRFHVHVLLGMLLFILVPFTRLVHMFTAPLHYFFRPYIVYRSRDRVAPGTRRGTTPQSRAWVPVGTEDRDS
>CP027433.1|AVM01502.1|3436589_3437816_+|MFS-transporter
MSTDTLPAGVTAAAQTRNLILATLAFAITFWAWNLIAPLGVFYASEGEMDLSSSQKSVLIAVPILVGSLGRIVVGVLTPRFGGRVMFTVLLLLSAPFVLLVAVAGLLKSFPMMIVIGFFLGIAGTSFAAGIPFLNNWYQASRRGFATGVFGAGMGGTALSAFFTPRFKEWFGYFATHVIIAVALVVVAAVCWLVMRDAPTFAPNTEPAVPKLVSALKLPITWQMSFLYAAAFGGFVAFSTYLPTYLNDVYNMTDLTSAGARTAGFAIAAVIARPIGGALSDKFGPRLITAISCGGAAVLAVWMIFKPSMPWWAGADFLLMAVMMGMGAGSVFAWVAVASPPARVGAVTGLVGAAGGLGGFFPPLVMGATYDPVTHSYTVGLALLVAFAAVACLFTIFGIPRQKKEADA
>CP027433.1|AVM01503.1|3437812_3438163_+|cupin
MSVTDLNALADELLGQARAAHSGRAAETVRPSTSPGEQRTGDRLRETVIALAAGHALSDHESPGEATLQVLRGEVRLTVPGEADLPLGVGHRADIPLVRHGLTATTDAVVLLTVAL
>CP027433.1|AVM01504.1|3438272_3440792_+|hypothetical-protein
MVHGSGPRILEIRTHGVSGTPAHHILADAAGPADPRCVVSVPGPRAADRAFVRCVDAAGDPVSAPGDPDREVWAYHWGAMTSGGWRKALWALLIPFALINLAYTMLPGVPDRPDDGAAPDPARPARARPPHLARAVVHVLGLALTVLFTVQLGLVAIDLFAGQCLAQPRTDFGAECLTGLPLRDWLAADHRRAAVLSTGAVALLLMIGAVTARFTDVDQHGVPDPVAAEPGTRAATDDLLDGEITAPLLRALHGLAVPTALALTVLSTANRQTPGWWTAAGVLIALAVATALLDVPYSAAATAALHAWTCNTAFRTAGVLLTVAAYAAVGVLGWRVLPGRLADPGVVGAGIGATVVLVLLACLALWLLLFAVMIPLVCADRSRWRPFPAPFRPWIRGWSPLVVAGGAVLLGAGFGAGLARVFALAAGGSKRPESPTALHLPAVYDQLSLLWGLVGAAVVFTALTGAALWLRSGWRPRHPVARALSFPTGARSAPPPAAALRRWRRRWWIAQANHRLPRVAGVLAALTVAFVVWVMTLYYTDPDWADPDRARPDWQAMAALNAGLRIFGTVVLIVFVGGLAWAIQRATSRPDGAGRTLGVLWDVAAFWPREGHPVVPPAYAPTVVSDIVAKVRDLRNDPRHRDTHLVLSGHSQGSLIMYIAAHQLTTGDRTERLSLLTYGSQLQWLYGRAFPRFLDFDRHLALLTGLDGRWINVVRFTDPVGGPVLSWEPRWHEGSPGSGLAPHPVATVLDRDAVGDPRRGTHRGWRERQPGVIVNADPRDAAGRTRVLRLGNERWLPDPPIDPEFAFDRGHSNYVREPAWPALIAELVDTPPPRTTPDE
>CP027433.1|AVM01505.1|3440858_3443249_-|phosphoenolpyruvate-synthase
MPVTERHVGEQHAGEQESSGPEAGVRPTGAAWVRGLSELGLADAPSVGGKGANLGELIRGGFPVPGGFVVTKEAYLAAVEAAGLRDELAAHALPPAEMAEDELLALADVLRAKLSQVPMPPEIAAAVVARYHELGDDRRVAVRSSAPAEDAADTSFAGIHDSFTDVEGAQNLLAAVNRCWQSLWSARAMTYRRVQNVTEEPSVAVVVQLMADSVSAGVMFTVDPRSGDAGQILIEAAHGLGEVVVGGQVEPDTYLVGKSPRRILDVHLGAQDFQLVAGRSAAEVPERIDEAGRGARVLSDEQILALAQIAVDAEAHYGAPQDMEFSFCARPDGSGLDAFIVQSRPITTLEGAARTGSVNGDSMHGDSVHGGEVLVTGLGASPGTATGRVRIMREVSQASALNDGDVLVAPMTRPDWLPVLRRASAIVTDGGGITCHAAIVGRELGKPVVVGARGATGTLTEGELVTVDGAAGTITAGAPVVVAVSPAGATPPGPVRELSATRVYVNLATPDSAEEVAAMDVDGVGLLRAEFMITEALGGLHPAKLLEQGRRDEYVEKMAAGVAKIAAAFADRPVVYRAIDLRSNEFAALEGGDSEPDEDNPMIGYRGCYRYVREPELFRLDLDVIAAVRRRHPNVHLMIPFVRTRWELHECLALLDEHPLGADTGLKRWIMAEVPSVVYWLDEYAAMGIDGVSIGSNDLTQLVLGVDRDSEVCKDLFDTMDPAVLDVIDRIIERATAAGMTTSLCGQAVSLYPELAEHLVRCGITSVSVTPDVAARTRHNVAVAERAIILDAARRR

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Crispr_ID: CP027433_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027433_17

3887064-3887319

Orphan

Consensus_repeat	Method
GGGACTGCGCACCGCAGACCTTTCGACAAGCTCAAGGAGCTACCCGCCACACGTTGAGCCG	PILER-CR

2 spacers

The CRISPR arrays of CP027433_17

>merge|CP027433|17|3887064-3887319|PILER-CR
GACCTTTCGACAAGCTCAAGGAGCCACCAAATCTCGCTCGTTGAGCCGCCGAGGAACGAGGCGAGTCGAAACGACCCGCCGACAAGCTCAAGGGACTGCGCACCGCAGACCTTTCGACAAGCTCAAGGAGCTACCCGCCACACGTTGAGCCGCCGAGGAACGAGGCGAGTCGAAACGACCCCCCGACAAGCTCAAGGGACTGCGCACCGCAGACCTTTCGACAAGCTCAAGGAGCTACCCGCCACACGTTGAGCCG

>CP027433|17|2|3887064-3887319|PILER-CR
GACCTTTCGACAAGCTCAAGGAGCCACCAAATCTCGCTCGTTGAGCCGCCGAGGAACGAGG	CGAGTCGAAACGACCCGCCGACAAGCTCAAGGGACTGCGCACCGCAGACCTTTCGACAAGCTC
AAGGAGCTACCCGCCACACGTTGAGCCGCCGAGGAACGAGGCGAGTCGAAACGACCCCCCG	ACAAGCTCAAGGGACTGCGCACCGCAGACCTTTCGACAAGCTC
AAGGAGCTACCCGCCACACGTTGAGCCG

Protein	Signature genes	Signature genes Name	Protein_function
CP027433.1\|AVM01803.1\|3889087_3889906_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372544
CP027433.1\|AVM01806.1\|3892382_3893210_-\|protein-tyrosine-phosphatase	unknown	unknown	gnl\|CDD\|379135
CP027433.1\|AVM01802.1\|3886416_3887046_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378676
CP027433.1\|AVM01809.1\|3897635_3898511_+\|short-chain-dehydrogenase	unknown	unknown	gnl\|CDD\|235633
CP027433.1\|AVM01810.1\|3898573_3900232_-\|acyl-CoA-synthetase	unknown	unknown	gnl\|CDD\|341259
CP027433.1\|AVM02353.1\|3889919_3890861_-\|polyphosphate-kinase-2	unknown	unknown	gnl\|CDD\|213852
CP027433.1\|AVM01799.1\|3881155_3882541_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|236106
CP027433.1\|AVM01811.1\|3900228_3901185_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|377240
CP027433.1\|AVM02352.1\|3874236_3874980_+\|ABC-transporter	unknown	unknown	gnl\|CDD\|213235
CP027433.1\|AVM01796.1\|3877017_3878229_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225306
CP027433.1\|AVM01807.1\|3893318_3895196_-\|ABC-transporter	unknown	unknown	gnl\|CDD\|224055
CP027433.1\|AVM01797.1\|3878356_3879589_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|238624
CP027433.1\|AVM01804.1\|3891023_3891467_-\|cyclase	unknown	unknown	gnl\|CDD\|176861
CP027433.1\|AVM01800.1\|3882905_3884129_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|239201
CP027433.1\|AVM01801.1\|3884285_3886412_+\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224422
CP027433.1\|AVM01798.1\|3879936_3881058_+\|choloylglycine-hydrolase	unknown	unknown	gnl\|CDD\|238885
CP027433.1\|AVM01795.1\|3875793_3876675_-\|3-methyladenine-DNA-glycosylase	unknown	unknown	gnl\|CDD\|223200
CP027433.1\|AVM01794.1\|3874976_3875783_+\|ABC-transporter-permease	unknown	unknown	unknown
CP027433.1\|AVM01805.1\|3891520_3892333_-\|protein-tyrosine-phosphatase	unknown	unknown	gnl\|CDD\|379135
CP027433.1\|AVM01808.1\|3895341_3896967_-\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573

Protein	Function_ID	Function_description	E-value
CP027433.1\|AVM01803.1\|3889087_3889906_-\|hypothetical-protein	gnl\|CDD\|372544	pfam13273, DUF4064, Protein of unknown function (DUF4064).	0.00614969
CP027433.1\|AVM01802.1\|3886416_3887046_+\|hypothetical-protein	gnl\|CDD\|378676	pfam11575, FhuF_C, FhuF 2Fe-2S C-terminal domain. This family consists of several bacterial ferric iron reductase protein (FhuF) sequences. FhuF is involved in the reduction of ferric iron in cytoplasmic ferrioxamine B. This domain is the C-terminal domain that contains 4 conserved cysteine residues that are found to be part of a 2Fe-2S cluster.	1.41653e-06
CP027433.1\|AVM01809.1\|3897635_3898511_+\|short-chain-dehydrogenase	gnl\|CDD\|235633	PRK05872, PRK05872, short chain dehydrogenase; Provisional.	1.8875e-124
CP027433.1\|AVM01810.1\|3898573_3900232_-\|acyl-CoA-synthetase	gnl\|CDD\|341259	cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD. This subfamily of the AMP-forming adenylation family contains Escherichia coli FadD and similar prokaryotic fatty acid CoA synthetases. FadD was characterized as a long-chain fatty acid CoA synthetase. The gene fadD is regulated by the fatty acid regulatory protein FadR. Fatty acid CoA synthetase catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, followed by the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions.	7.54141e-168
CP027433.1\|AVM01799.1\|3881155_3882541_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|236106	PRK07818, PRK07818, dihydrolipoamide dehydrogenase; Reviewed.	0
CP027433.1\|AVM02353.1\|3889919_3890861_-\|polyphosphate-kinase-2	gnl\|CDD\|213852	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1). [Central intermediary metabolism, Phosphorus compounds].	2.22512e-151
CP027433.1\|AVM01811.1\|3900228_3901185_-\|metal-dependent-hydrolase	gnl\|CDD\|377240	pfam04199, Cyclase, Putative cyclase. Proteins in this family are thought to be cyclase enzymes. They are found in proteins involved in antibiotic synthesis. However they are also found in organisms that do not make antibiotics pointing to a wider role for these proteins. The proteins contain a conserved motif HXGTHXDXPXH that is likely to form part of the active site.	5.54183e-13
CP027433.1\|AVM02352.1\|3874236_3874980_+\|ABC-transporter	gnl\|CDD\|213235	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter. The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multi-enzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.	9.97646e-60
CP027433.1\|AVM01796.1\|3877017_3878229_-\|hypothetical-protein	gnl\|CDD\|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	1.70906e-14
CP027433.1\|AVM01807.1\|3893318_3895196_-\|ABC-transporter	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.01309e-160
CP027433.1\|AVM01797.1\|3878356_3879589_-\|amidohydrolase	gnl\|CDD\|238624	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.	8.44101e-90
CP027433.1\|AVM01804.1\|3891023_3891467_-\|cyclase	gnl\|CDD\|176861	cd07819, SRPBCC_2, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	8.08895e-43
CP027433.1\|AVM01800.1\|3882905_3884129_+\|oxidoreductase	gnl\|CDD\|239201	cd02803, OYE_like_FMN_family, Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.	1.28941e-109
CP027433.1\|AVM01801.1\|3884285_3886412_+\|S9-family-peptidase	gnl\|CDD\|224422	COG1505, COG1505, Serine proteases of the peptidase family S9A [Amino acid transport and metabolism].	0
CP027433.1\|AVM01798.1\|3879936_3881058_+\|choloylglycine-hydrolase	gnl\|CDD\|238885	cd01902, Ntn_CGH, Choloylglycine hydrolase (CGH) is a bile salt-modifying enzyme that hydrolyzes non-peptide carbon-nitrogen bonds in choloylglycine and choloyltaurine, both of which are present in bile. CGH is present in a number of probiotic microbial organisms that inhabit the gut. CGH has an N-terminal nucleophilic cysteine, as do other members of the Ntn hydrolase family to which CGH belongs.	4.31045e-123
CP027433.1\|AVM01795.1\|3875793_3876675_-\|3-methyladenine-DNA-glycosylase	gnl\|CDD\|223200	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair].	1.78617e-18
CP027433.1\|AVM01806.1\|3892382_3893210_-\|protein-tyrosine-phosphatase	gnl\|CDD\|379135	pfam13350, Y_phosphatase3, Tyrosine phosphatase family. This family is closely related to the pfam00102 and pfam00782 families.	7.5993e-68
CP027433.1\|AVM01805.1\|3891520_3892333_-\|protein-tyrosine-phosphatase	gnl\|CDD\|379135	pfam13350, Y_phosphatase3, Tyrosine phosphatase family. This family is closely related to the pfam00102 and pfam00782 families.	1.28003e-70
CP027433.1\|AVM01808.1\|3895341_3896967_-\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0

>CP027433.1|AVM01802.1|3886416_3887046_+|hypothetical-protein
MESPNPMPAALDRLREVNSYFAVRYGPDQAGAGRPAADLLDPAMAGDLFDHAEEILGTRERRVAVSWVFFEYIARIWAVALGTAMLTGRSVALDPNRLRISRDGNCTVLHLADPIPGGSPVDEVARGHAEPLIAAWRGHVAAGLLWGNAASSVISAGGQLGSAADAVVAQSLAYPNLAAALGPENRRRSCCLYYRTSIGGYCGDCSLTG
>CP027433.1|AVM01801.1|3884285_3886412_+|S9-family-peptidase
MDTEDPYLWLEDVTGDDALDWVRAHNEPTVDDLTSSPRFAELRDGALEVLDTDEKIPYVRRRGEYLYNFWRDAEHPKGLWRRTTLDSYRTASPDWDVLIDVDELARAEGENWVWARVSLLYPDYDRALVALSRGGADATVVREFDVAQRDWVSESDGGFTLPEAKSSIGWIDRDTVYVGTDFAETPDGLPAMTTSGYPRTARRWVRGTPLDDAPTVFAGEVTDVAAGASYSHTPGYERHFVSRSTDFYNSLSYELVDGEPVLIDIPTDAHFSVREDHLLVMPRRDWAVDGVTHAPGSLLVFDYPSYLSGDRTHRVLFSPDRHTSLESYAFTRSRLVLVTLHDVATRLEFLTVGDWESAPIDGLPGLATIDVLDTDPDESDEIWLSASSFTHAPSLLHGDATTGVSVIKQAPEFFDASDVITEQFFATSADGTQIPYFVVRSRLRSTSEDSCSTSEDSRSTSTSEDPGSTEAGTSPRPTLLYGYGGFENSLTPGYSGIAGRSWIERGGTYVVANIRGGGEYGPTWHTQARKAGRHLVYEDFAAVARDLVERGFTTAEQLAAQGGSNGGLLMGVMLTGYPELFAALVCQVPLIDMRRYHLLLAGASWMAEYGDPDDPEEWAFIREYSPYQRLRRDADYPALLVTTSTRDDRVHPGHARKLVARLEEFGHPVSYYENIEGGHGGAADNAQAAFKSALAYEFLWRTVGSAKD
>CP027433.1|AVM01800.1|3882905_3884129_+|oxidoreductase
MVLDLFAPARLGPLTLRNRLIKCATFEGMTPDALVSDDLIEFHREYAAGGVAISTVAYCAVSGEGRTDRHQIWMRDEAVPGLRRLTDAIHAEGALAAAQLGHAGAVSNSKSNRARALGPGAIPAPMGMSLTRRLSVDEMPALRAKFATAAKLAVDSGFDALEVHCGHNYLISSFLSPLLNHRRDGYGGPLVNRARLAREVLETVREAVGPDVAVWAKLNMYDGVGAPGPGRGPKPWRGFNVDEACETARLFEADGYIDAIEPTAGSSLLNPMYLFHGRPPRASFAAAFTGAMRAGLKTAGPVFLKYYPYHDAYLLPLARELRAATSLPIILLGGITDRASMDLAMAEGFDFVAMGRALLREPDLPRRIAADPDTVSRCTHCNECMPTIYSRTRCPIRTGELPDPVGR
>CP027433.1|AVM01799.1|3881155_3882541_-|dihydrolipoyl-dehydrogenase
MTEHFDTVVLGAGPGGYVAAIRSAQLGMKTAVIEEKWWGGVCLNVGCIPSKALLRNAELAHVFQHEAKTFGISGEVSFDFGAAFDRSRKVSDGIVKGVHFLMKKNKITEIDGYGVFEDASTIAVGDRKVTWDNLIIDTGSTVRLLPGVELSDNVVTYEQQILTRDLPESIAIVGAGAIGMEFGYVLANYGVDVTIIEFLPRVLPNEDEEVSKEIAKQYKKLGVKILTGTAVQTVDDQGSQVVVTYKDPKGAENSLTVDKVLMSVGFAPRVEGYGLEKTGVALTDRGAIAIDDHMRTNVPGVYAIGDVTGKLMLAHVAEAQGVVAAETMAGAETMPLGDYRMMPRATFCQPQVASFGLTETQAKDEGYDVKVTKFPFSANGKAQGLAATAGFAKLVTNAETDELLGGHLVGDNVSEMLPEMTLAQKWDLTAKELARNVHTHPTMSEALQETFHGAIGHMINL
>CP027433.1|AVM01798.1|3879936_3881058_+|choloylglycine-hydrolase
MCTRVMWPDAHGAVIVGRNMDFHQDLHTNLWKLPRGIKRNDRVEGKLEWTAKYGSVVAGVYDILSADGVNEQGLAGHVLWLAESEYGTPDPQRPQLAMSVWLQYYLDNFATVGEAIAWTKENNPQVIPMADPTGGSHPAIHLALDDASGDSAILEYIDGELNVYHDRDYLVMTNSPSYDQQLELVKKYDGIGGDAPLPGTCDAKDRFARADFYVRHQVQPKNNLQALAAMQSIIRNTAQPFRTPEPGKPDASQTLWQVVIDLTNLRYVFESTTRPNTVWVDLKELDFSEGSGEWKLDLINDLEVEHGLSGNVTKKFAKHRKFHIVSIEQAKLIGEVVEKAMKTVGEVKEPAEGYAHKIQDSVNAKLAEFVDAE
>CP027433.1|AVM01797.1|3878356_3879589_-|amidohydrolase
MTTTVLRNARLIDGNGGDPVDDAVVVIDGDTISYAGPAAGAPDVGDAAVDVDLKGNSVCPGFFDVHVHLALPGTKGSPVMMAMVPPSYCYFQLIDRLKVTLEAGVTTVRDLMGVDVGVRDAVAHGLIEGPRLLVADKMLSQTGGHADFHIPSGLSGTEIAGGVLVDSVDEARLEARELCREGVDVIKVASSGGVTSINDQPDYLGAREELVAALVEEGQNYGGRPVAAHAIGLKGITAAVEAGVRSIEHGYALTDELRQKMVENGQFLVPTLLETMHPDTATPQAVAKSEKWHKMAQESIKASVEAGIKIATGTDAGLVPDHGTNLGEVGLLVKFGGMTPLQAITAGTKTSAELCMVDDKLGTLEAGKLADVVVVKGDPSTDADLVGDKENILLVLKEGQTKSNRGGFAI
>CP027433.1|AVM01796.1|3877017_3878229_-|hypothetical-protein
MSQRTLDQILVEAQGLLVPFGDSVPESERLQAVVRGIELYQPGASTDYSGHLVLVSMPISGDDGLAALCAECVDAAALVLPAGTARGLQAPAAPVLLRRSPWVSGDTLIRALAGIVRDPNALEDPSEASEREAALAVRRRQSALLALLNGTSEAALPAAVVGLRPDRAHVAVAAEVPTRSLERFRLALAAEFPEECSVLSEGILLAVVPVATAETAGDVVERLGARLRRAMRSSGDLPVGIGHRVPGVYQLHESAAAAREILRALNIKLGARPLASEGAVRIASAADVDDALMIVRSGDALVPYENDLTAPLAVLADYDREYRSDLLTTVYTALEFRENISEAARQLGIHPNTLRARIDRIRELSGIDLTDPASALRAVLGFVSSKRMRALARHTIDSGDAPT
>CP027433.1|AVM01795.1|3875793_3876675_-|3-methyladenine-DNA-glycosylase
MQPDSERRWRTPGPIDVDAVLGLHRRGAHDPAYRKAPDGSIWRAVHTPDGPGAVAVSSDAPAGEVVGRAWGPGAPWLVESLPGLLGAGDDPDSLPVDSDVLRRLVARSRGLRIGRSDRVWEALVAAVMEQKVVGAEAYRAWRYLLRRYGTRAPGPVELLVPPPRPVWREITEADWHRSGLEPVRMRTIRHAATYDVETKADVLTALPGIGRWTAAHVRFRALGDADAVPFGDYHVPSIVGQKLAGEPVDDAGMAELLKPYAGHRYRVVRMCELHGEWPQRRAPRMPVRDYRRL
>CP027433.1|AVM01794.1|3874976_3875783_+|ABC-transporter-permease
MNPGAPVGQVRRGVVAERVRTGGLRSFLLLGSVPAGVVLPLLITFGIAAVAERISRLNSSEISVSETTSSNSVYWILTFTVIVGALSAAYAQATSMRGPARDMDRYLYPWAPASALARWLYYGLVTALVSAALVAVVMSALPAMFPTVYGQVDLFSAEGGRFVITVPVFAFFACGLGVGLAGVLGHPAGTLAVLLFWAFVMEDAIVFVPNGTRIQAYMPLLNGTWGTGQDLVITPPWGVDGALVYFALVCTTVFALGAAAVAARRRRH
>CP027433.1|AVM02352.1|3874236_3874980_+|ABC-transporter
MEVRDLRVDLGGRTVLHDVDLTVSGGEVVYLLGRNGAGKSTLLRSICGMVTPRSGSVFIGGTPVRSLGSPARRLGMHLGIETVHPGHTARRHLRWVAAAAGLPRSRVDDVLDITGVAAYGDRRIGGYSLGMRQRLGIATALLPDAHALVFDEPLNGLDVEGIVWFRSLLTELASRGRGVVVATHLLAEVQRSAGDSASPERPVARVVLVDRGTTSPAVGVSGFVGEHADLEAAYLAALGPAETGALA
>CP027433.1|AVM01803.1|3889087_3889906_-|hypothetical-protein
MRSLVSLFGIVAFTIAMIIAIPTMWSVQHVVSPDGFAEAASQAAEQREVQEYFADQIAQEATQAVDLPIAGTAVKPLATQYTQSPEFVADFTEIARQQHAWLFESPKPDTSLHEMDLNITPMVNQALAKGPVPVRVDQGITIAVDQNRLTAGSMEKTGQQLTLAAWISAAVAVAAGLLALIAARRRVVAVAWLGIGAFAAGVVGVLISKYLLRSASDSVSASELSTQQTVRVVAEDVLGGLTTTSWIVAVAGLIVALLGIVGVVVTGRRSTP
>CP027433.1|AVM02353.1|3889919_3890861_-|polyphosphate-kinase-2
MSLDDIEIGADLSKVSGRKALQNVVDLTDTRGFAVVDDDDDDPILLTLPQRNVVDTWREDYPYEERMNRAEYESQKRLLQVELLKLQKWTKQNGIRHLLVFEGRDAAGKGGTIKRFNEHLNPRGARTVALEKPSERESTEWYFQRYVQHLPAAGEMVFFDRSWYNRAGVERVMSFCTPEQYEQFLDQAPAFEKMLVDDGISLVKFWFSVSPLEQRTRFAIRQIDPVRQWKLSPMDLASLDRWNSYSDAKETMFARTDTDWAPWTVVKSNDKKRARLNAMRHVLSLHEYDGKDHELVGEPDPRIVARARDTIGD
>CP027433.1|AVM01804.1|3891023_3891467_-|cyclase
MAVSVSNEFDINAPASVVMEVLQDISSLPDWSSAHSAAEVLTTHDDGMPDRVKVSVGMLGINDTQELAYTWTENVCSWTLLESSQLAEQQGSYTLTSTGDDSTHVVFTLEVDLKIKLPGFLVKKGQKAAAETAKKGLTAEAERRAAE
>CP027433.1|AVM01805.1|3891520_3892333_-|protein-tyrosine-phosphatase
MTRSPALPAPSPIAALPNLRDLGGWTGVDGRPVQTGKLFRSTDFRSLPGDAHQELAPLGLQTIYDLRSASERQAMPDPALDGVTDVPLDVLADEAQAIPGNLGQILEDPKVVHELTAAMEGKAIEMMAGTYRRFVTMGSARASYRRFYLGLLGEDRGPALFHCTTGKDRTGWAAASFLSIVGVDRDDVYDDYLETNRRLLPALQPLFDKFASAGGDPDLLKPLLGVQRQYLDAAFDEVDKNFGDVPTYFDKALGIDAAAQERLRATYLAG
>CP027433.1|AVM01806.1|3892382_3893210_-|protein-tyrosine-phosphatase
MTDTATSSATTVPGAPSPFPTLPNWRDLGYWPAADGKIVRPGMLYRTTEFEKTSEADLKAVGDLGLATIVDLRTVPERGACPDPVFDDVGPLWLNILEDAPHTAGANPMKYATDPSAVKELTPTVAQEMMIGTYQQLINSDSALRYYGEFYTLLLAGDLTPTAFHCTTGKDRTGWTAASFLSLMGVAKDDVYKDYLLTNSRLLPALAPLVAQFEKQGVDAGALNSLLGVEKVYLDTAFDLVAKGWGTLENYFAEGLGIDVDGQAELRARYLVDPS
>CP027433.1|AVM01807.1|3893318_3895196_-|ABC-transporter
MSMESVAWDVMYKSMTSTDGVSRADRRQTLRRIAEFARPHRRRIAVFLLLSVITAVLTVVTPLLAGRVVNLIAAADSAAASTIVWLAVLIAVIAVAEAGVGIATRWLSANLGEGLILDLRRAVFDHVQRMPVAFFTRTRTGALVSRLNNDVIGAQRAFSDTLSGVVSNSVSLVLTLGVMFAISWQITLLALILLPVFVVPARRMGTRMAGLARESAEYDARMSTQMTERFSAPGATLVKLFGRPEAESREFARRADAVRDIGVRQAMLQEYFYTALMLVSALALALVYGLGGWLAVHQHLSAGAVVALALLLTRMYAPLTALANARVEIMSALVSFERVFEVLDLPPLIADSPDAVGVPAPERGVRLRFDGVSFAYPAADKVSLASLEEVAQLDNRGGEQILHDVDLDVPPGAMVALVGSSGAGKSTVASLATRLYDVDAGSVRLNGVDVRDLTTESVHRTVGLVTQDGHLFHDTVRANLAFAAPGCTEGDLWSALERARLDDLVRSLPNGLDTVVGERGYRLSGGERQRLTIARLLLARPSVVILDEATAHLDSTSEAAVSEALAEALAGRTSLVIAHRLSTVRAADEIVVLEAGHVVERGDHATLLALGGRYAELYRTQFAPA
>CP027433.1|AVM01808.1|3895341_3896967_-|chaperonin-GroEL
MAKQIAFDEEARRGLERGLNVLADTVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDAYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGSNPMGLKRGIEKAVEAVSDSLLASATEIETKEQIAATAGISAGDQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDVDRQETVLEDPYVLTYSGKISTVKDLLPLLEKVIQAGKSLLIIAEDVEGEALSTLVVNKLRGTFKSVAVKAPGFGDRRKAMLADIAILTGGEVISEEVGLSLETAGLESLGTARKVVVTKDETTIVDGAGDNEQIAGRVAQIRNEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGAALLQSESAVDGLSLTGDEATGAQIVKVALSAPAKQIAVNAGLEPGVVADKIRNSAQGTGLNAATGEYEDLLAAGINDPVKVTRSALQNAASIAALFLTTEAVVADKPEKNPAPAMPGGDEMGGMGF
>CP027433.1|AVM01809.1|3897635_3898511_+|short-chain-dehydrogenase
MGSNLSGKVVLITGGGNGVGAETALQVVKRGARVILTDIDRNALDETVDQLGVGHALGIVADVTDLPAMEAAVAQGVERFGGLDVVVANAGIASYGSVLHVEPEAFHRLIDVNVNGVFHTVRAALPSIIDRRGYVLVVSSMAAFVTAPSLAAYCTSKSGVESFAGALRQEVAHLGVDVGSAHMSWIDTPMVRDAQSDLPAFREMLAHLPGPLSHVTTIDKCGVAFAKGIEQRRRRVYCPEWVGVLRFAKPFLDTGLAALLTGKQMAETIVAVDQQVARLGRSVSSRFDDSR
>CP027433.1|AVM01810.1|3898573_3900232_-|acyl-CoA-synthetase
MTYAERPWLARYPVGTPADIIQEHGTALGVFDAAVEAAPDAAFLQYFGTSQSFADVDRASRALAATLADRGFSAGDRLALYVQNNPAFVIGMIAAWRLGGIAVAVNPMNKARELTYLLADSGATALLALDDLYAQVGKDVVENGDTAVSTVITCSARDMQDRDDARLFAGLERIRVEGTLDLATVVAAGGGDELADPGLGPDDVAVLAYTSGTTGDPKGAMNTHGNFAFNAQVYREWTGLRPGEGVLGVAPLFHITGLVGHIMVAMLVRSPLILAHRFEPAVMVDAIREYRPVFTVGAITAFGALAAVPGVAPEDFSSLRILYSGGAPIAPAVGDRLEKTFGAYIHNIYGLTETNSPSHAVPLGVRAPVDPASGALSVGVPVFNTVVRVVGADGADVPVGEVGEFVTSGPQVVPGYWNKPEATATSIPGGELHTGDVGFMDDDGWFYVVDRMKDMINASGYKVWPREVEDVLYTHPAIREAAVVGVPDEYRGETVKAFVALHAGAELEPDELIDFAKSQMAAYKYPRSVEIVDELPKTVTGKILRRELRTAD
>CP027433.1|AVM01811.1|3900228_3901185_-|metal-dependent-hydrolase
MTTVPDLTELLADSPSNWGKWGPDDEVGSLNYLTAAQVLAGVSLIKRGDLFTLQRLIGDPKGDPVWPGRSPASKEMVFDESDWDEGGEGPQFPGGLHYADDKLEAFLQGSTQYDALGHVWYDGQIWNGYDARTTIGGLQKASVEPIAERGVAGRAVLLDLARWRGVEALGPKEAFDHEDLQACAAAQGVELRPRDIVLLRTNHLELFFADAEGFYADFGEPGLTYSPALVQWFAEMEIPNLVTDTIANEVTYDPESGAALVLHNALMRNLGIAFTEICDLEKLAADCAEDGVYEFFYVAAPLKIHRASGSPVNPVVIK

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP027433_4	4.3\|1041993\|15\|CP027433\|CRISPRCasFinder	1041993-1042007	15	CP027433.1	3636625-3636639	0	1.0
CP027433_17	17.2\|3887249\|43\|CP027433\|PILER-CR	3887249-3887291	43	CP027433.1	3887320-3887362	0	1.0
CP027433_17	17.2\|3887249\|43\|CP027433\|PILER-CR	3887249-3887291	43	CP027433.1	3888729-3888771	0	1.0
CP027433_3	3.2\|1001812\|18\|CP027433\|CRT	1001812-1001829	18	CP027433.1	1001944-1001961	1	0.944
CP027433_17	17.2\|3887249\|43\|CP027433\|PILER-CR	3887249-3887291	43	CP027433.1	3888833-3888875	2	0.953
CP027433_17	17.2\|3887249\|43\|CP027433\|PILER-CR	3887249-3887291	43	CP027433.1	3888937-3888979	2	0.953

1. spacer 4.3|1041993|15|CP027433|CRISPRCasFinder matches to position: 3636625-3636639, mismatch: 0, identity: 1.0

ttgaactcgtcgaaa	CRISPR spacer
ttgaactcgtcgaaa	Protospacer
***************

2. spacer 17.2|3887249|43|CP027433|PILER-CR matches to position: 3887320-3887362, mismatch: 0, identity: 1.0

ccgaggaacgaggcgagtcgaaacgaccccccgacaagctcaa	CRISPR spacer
ccgaggaacgaggcgagtcgaaacgaccccccgacaagctcaa	Protospacer
*******************************************

3. spacer 17.2|3887249|43|CP027433|PILER-CR matches to position: 3888729-3888771, mismatch: 0, identity: 1.0

ccgaggaacgaggcgagtcgaaacgaccccccgacaagctcaa	CRISPR spacer
ccgaggaacgaggcgagtcgaaacgaccccccgacaagctcaa	Protospacer
*******************************************

4. spacer 3.2|1001812|18|CP027433|CRT matches to position: 1001944-1001961, mismatch: 1, identity: 0.944

gagaagatcgtcgaggtc	CRISPR spacer
gagaagatcgtcgagctc	Protospacer
*************** **

5. spacer 17.2|3887249|43|CP027433|PILER-CR matches to position: 3888833-3888875, mismatch: 2, identity: 0.953

ccgaggaacgaggcgagtcgaaacgaccccccgacaagctcaa	CRISPR spacer
ccgaggaacgaggcgagtcgaaacgacccttcgacaagctcaa	Protospacer
*****************************..************

6. spacer 17.2|3887249|43|CP027433|PILER-CR matches to position: 3888937-3888979, mismatch: 2, identity: 0.953

ccgaggaacgaggcgagtcgaaacgaccccccgacaagctcaa	CRISPR spacer
ccgaggaacgaggcgagtcgaaacgacccttcgacaagctcaa	Protospacer
*****************************..************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP027433_5	5.46\|1420944\|39\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1420944-1420982	39	MT771343	Gordonia phage Clown, complete genome	48714-48752	2	0.949
CP027433_5	5.101\|1424979\|31\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1424979-1425009	31	MK801721	Gordonia phage William, complete genome	40592-40622	4	0.871
CP027433_5	5.101\|1424979\|31\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1424979-1425009	31	MK814757	Gordonia phage Fairfaxidum, complete genome	40509-40539	4	0.871
CP027433_9	9.1\|2463374\|28\|CP027433\|CRISPRCasFinder	2463374-2463401	28	NZ_CP040824	Paraoceanicella profunda strain D4M1 plasmid pD4M1F, complete sequence	70281-70308	5	0.821
CP027433_5	5.4\|1417866\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1417866-1417898	33	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	1974547-1974579	6	0.818
CP027433_5	5.21\|1419110\|35\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1419110-1419144	35	MH001451	Mycobacterium phage Nairb, complete genome	2089-2123	6	0.829
CP027433_5	5.21\|1419110\|35\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1419110-1419144	35	MF155936	Mycobacterium phage ZenTime222, complete genome	2089-2123	6	0.829
CP027433_5	5.21\|1419110\|35\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1419110-1419144	35	MK494089	Mycobacterium phage Ibrahim, complete genome	2089-2123	6	0.829
CP027433_5	5.21\|1419110\|35\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1419110-1419144	35	NC_024135	Mycobacterium phage Bernal13, complete genome	2089-2123	6	0.829
CP027433_5	5.21\|1419110\|35\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1419110-1419144	35	MG925349	Mycobacterium phage Mendokysei, complete genome	1996-2030	6	0.829
CP027433_5	5.21\|1419110\|35\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1419110-1419144	35	KM591905	Mycobacterium phage RonRayGun, complete genome	2089-2123	6	0.829
CP027433_5	5.21\|1419110\|35\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1419110-1419144	35	MN735432	Mycobacteriophage Whitty, complete genome	2089-2123	6	0.829
CP027433_5	5.56\|1421676\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1421676-1421708	33	NZ_CP011046	Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid pCI3, complete sequence	66339-66371	6	0.818
CP027433_5	5.56\|1421676\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1421676-1421708	33	NZ_CP021037	Clavibacter michiganensis subsp. insidiosus strain R1-3 plasmid pCI3, complete sequence	65264-65296	6	0.818
CP027433_8	8.1\|1893360\|31\|CP027433\|CRISPRCasFinder	1893360-1893390	31	MT723938	Gordonia phage Bunnybear, complete genome	29105-29135	6	0.806
CP027433_5	5.42\|1420647\|38\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1420647-1420684	38	MN175604	Gordonia phage PhorbesPhlower, complete genome	14986-15023	7	0.816
CP027433_5	5.53\|1421460\|34\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1421460-1421493	34	NC_020548	Azoarcus sp. KH32C plasmid pAZKH, complete sequence	427609-427642	7	0.794
CP027433_5	5.56\|1421676\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1421676-1421708	33	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	521391-521423	7	0.788
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	NZ_LT703506	Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 2	13070-13102	7	0.788
CP027433_9	9.1\|2463374\|28\|CP027433\|CRISPRCasFinder	2463374-2463401	28	NZ_CP026519	Deinococcus sp. NW-56 plasmid unnamed3, complete sequence	48914-48941	7	0.75
CP027433_5	5.56\|1421676\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1421676-1421708	33	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	317457-317489	8	0.758
CP027433_5	5.56\|1421676\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1421676-1421708	33	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	75403-75435	8	0.758
CP027433_5	5.56\|1421676\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1421676-1421708	33	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	18005-18037	8	0.758
CP027433_5	5.101\|1424979\|31\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1424979-1425009	31	MK359313	Gordonia phage Vasanti, complete genome	36685-36715	8	0.742
CP027433_5	5.101\|1424979\|31\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1424979-1425009	31	MN234161	Gordonia phage Toast, complete genome	39917-39947	8	0.742
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	MN096378	Microbacterium phage MCubed, complete genome	7000-7032	8	0.758
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	MH513982	Microbacterium phage Sansa, complete genome	6996-7028	8	0.758
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	KM233261	Sulfitobacter phage NYA-2014a, complete genome	12231-12263	8	0.758
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	NZ_CP026305	Streptomyces lunaelactis strain MM109 plasmid pSLUN1, complete sequence	88206-88238	8	0.758
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	NZ_CP006990	Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence	406825-406857	8	0.758
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	672809-672841	8	0.758
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	MH536815	Streptomyces phage Crosby, complete genome	44658-44690	8	0.758
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	MH229864	Streptomyces phage UNTPL, complete genome	44638-44670	8	0.758
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	MN224565	Streptomyces phage Intolerant, complete genome	44307-44339	8	0.758
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	MH825706	Streptomyces phage Microdon, complete genome	44385-44417	8	0.758
CP027433_5	5.21\|1419110\|35\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1419110-1419144	35	MN234196	Gordonia phage CloverMinnie, complete genome	8813-8847	9	0.743
CP027433_5	5.42\|1420647\|38\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1420647-1420684	38	AM491333	Archaeal BJ1 virus V1(partial), V2-V9 and V10(partial) genes, isolate mutant 5'-3'(AM419438-ORF32-nucleotide 14790) insertion	7220-7257	9	0.763
CP027433_5	5.53\|1421460\|34\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1421460-1421493	34	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	1752286-1752319	9	0.735
CP027433_5	5.54\|1421530\|34\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1421530-1421563	34	AF394895	Actinophage Q5 replication protein gene, partial cds	840-873	9	0.735
CP027433_5	5.56\|1421676\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1421676-1421708	33	NZ_CP017887	Pseudomonas frederiksbergensis strain ERDD5:01 plasmid unnamed1, complete sequence	179109-179141	9	0.727
CP027433_5	5.56\|1421676\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1421676-1421708	33	NZ_CP017887	Pseudomonas frederiksbergensis strain ERDD5:01 plasmid unnamed1, complete sequence	261935-261967	9	0.727
CP027433_5	5.56\|1421676\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1421676-1421708	33	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1810139-1810171	9	0.727
CP027433_5	5.63\|1422189\|34\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1422189-1422222	34	NZ_CP011296	Rhodococcus erythropolis strain BG43 plasmid pRLCBG43, complete sequence	164457-164490	9	0.735
CP027433_5	5.94\|1424472\|35\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1424472-1424506	35	MK494090	Mycobacterium phage Jordennis, complete genome	16080-16114	9	0.743
CP027433_5	5.94\|1424472\|35\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1424472-1424506	35	MH744423	Mycobacterium phage Saguaro, complete genome	24645-24679	9	0.743
CP027433_5	5.101\|1424979\|31\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1424979-1425009	31	MN234179	Gordonia phage Pipp, complete genome	39469-39499	9	0.71
CP027433_5	5.101\|1424979\|31\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1424979-1425009	31	MH479927	Gordonia phage TimTam, complete genome	42200-42230	9	0.71
CP027433_5	5.101\|1424979\|31\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1424979-1425009	31	KU963255	Gordonia phage Nymphadora, complete genome	42200-42230	9	0.71
CP027433_5	5.101\|1424979\|31\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1424979-1425009	31	MH479912	Gordonia phage Eviarto, complete genome	42176-42206	9	0.71
CP027433_5	5.101\|1424979\|31\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1424979-1425009	31	MK501729	Gordonia phage Walrus, complete genome	38277-38307	9	0.71
CP027433_5	5.101\|1424979\|31\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1424979-1425009	31	KX557273	Gordonia phage BatStarr, complete genome	42201-42231	9	0.71
CP027433_5	5.101\|1424979\|31\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1424979-1425009	31	KU963251	Gordonia phage UmaThurman, complete genome	38914-38944	9	0.71
CP027433_5	5.101\|1424979\|31\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1424979-1425009	31	MH153808	Gordonia phage Petra, complete genome	37422-37452	9	0.71
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	NC_014811	Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence	18387-18419	9	0.727
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	NZ_CP032156	Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence	212415-212447	9	0.727
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	308718-308750	9	0.727
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1196201-1196233	9	0.727
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	617331-617363	9	0.727
CP027433_5	5.4\|1417866\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1417866-1417898	33	NZ_CP018573	Marivivens sp. JLT3646 plasmid unnamed, complete sequence	64303-64335	10	0.697
CP027433_5	5.22\|1419181\|35\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1419181-1419215	35	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1550118-1550152	10	0.714
CP027433_5	5.22\|1419181\|35\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1419181-1419215	35	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	2226213-2226247	10	0.714
CP027433_5	5.22\|1419181\|35\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1419181-1419215	35	MK433272	Gordonia phage IDyn, complete genome	25121-25155	10	0.714
CP027433_5	5.22\|1419181\|35\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1419181-1419215	35	MK376954	Gordonia phage WhoseManz, complete genome	24650-24684	10	0.714
CP027433_5	5.22\|1419181\|35\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1419181-1419215	35	MH669007	Gordonia phage Marietta, complete genome	25037-25071	10	0.714
CP027433_5	5.53\|1421460\|34\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1421460-1421493	34	NZ_LR594664	Variovorax sp. RA8 plasmid 3	102458-102491	10	0.706
CP027433_5	5.53\|1421460\|34\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1421460-1421493	34	NZ_CP041605	Streptomyces sp. S1D4-14 plasmid pS1D4-14.1, complete sequence	87860-87893	10	0.706
CP027433_5	5.56\|1421676\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1421676-1421708	33	NC_009939	Deinococcus geothermalis DSM 11300 plasmid pDGEO02, complete sequence	122226-122258	10	0.697
CP027433_5	5.63\|1422189\|34\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1422189-1422222	34	NZ_CP042263	Litoreibacter sp. LN3S51 plasmid unnamed2, complete sequence	299677-299710	10	0.706
CP027433_5	5.63\|1422189\|34\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1422189-1422222	34	LN997845	Streptomyces reticuli genome assembly TUE45, plasmid : IV	3486-3519	10	0.706
CP027433_5	5.94\|1424472\|35\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1424472-1424506	35	MT639646	Microbacterium phage Rasputia, complete genome	50193-50227	10	0.714
CP027433_5	5.98\|1424758\|39\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1424758-1424796	39	NC_015169	Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence	143586-143624	10	0.744
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	NZ_CP035092	Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence	451815-451847	10	0.697
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	NC_008688	Paracoccus denitrificans PD1222 plasmid 1, complete sequence	45348-45380	10	0.697
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	NZ_CP011665	Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence	326196-326228	10	0.697
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	NZ_CP033582	Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence	329769-329801	10	0.697
CP027433_5	5.102\|1425046\|33\|CP027433\|PILER-CR,CRISPRCasFinder,CRT	1425046-1425078	33	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	264819-264851	11	0.667

1. spacer 5.46|1420944|39|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MT771343 (Gordonia phage Clown, complete genome) position: , mismatch: 2, identity: 0.949

cggatggctcaccgacgacggccacatctgccccgtctg	CRISPR spacer
cgggtggctcaccgacgacggccacatctgccctgtctg	Protospacer
***.*****************************.*****

2. spacer 5.101|1424979|31|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MK801721 (Gordonia phage William, complete genome) position: , mismatch: 4, identity: 0.871

ttcggtgctggtcatactgcgtt-ctctctca	CRISPR spacer
ttccgtgctggtcatgctgcgttgctctctt-	Protospacer
*** ***********.******* ******.

3. spacer 5.101|1424979|31|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MK814757 (Gordonia phage Fairfaxidum, complete genome) position: , mismatch: 4, identity: 0.871

ttcggtgctggtcatactgcgtt-ctctctca	CRISPR spacer
ttccgtgctggtcatgctgcgttgctctctt-	Protospacer
*** ***********.******* ******.

4. spacer 9.1|2463374|28|CP027433|CRISPRCasFinder matches to NZ_CP040824 (Paraoceanicella profunda strain D4M1 plasmid pD4M1F, complete sequence) position: , mismatch: 5, identity: 0.821

cccttgagcacccgccgccccttgagca	CRISPR spacer
cggctgatcacccgccgccccgtgagca	Protospacer
*  .*** ************* ******

5. spacer 5.4|1417866|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 6, identity: 0.818

gacgccatcagatcggagacgtcctc--ccacgag	CRISPR spacer
accgccatgagatcggagacgtgctcggccacg--	Protospacer
. ****** ************* ***  *****

6. spacer 5.21|1419110|35|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MH001451 (Mycobacterium phage Nairb, complete genome) position: , mismatch: 6, identity: 0.829

ctgtcggacgcccgcgacgacgagaccggtgcccg	CRISPR spacer
ccgtcggacgcgcgcgacgccgagaccggcgaacg	Protospacer
*.********* ******* *********.*  **

7. spacer 5.21|1419110|35|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MF155936 (Mycobacterium phage ZenTime222, complete genome) position: , mismatch: 6, identity: 0.829

ctgtcggacgcccgcgacgacgagaccggtgcccg	CRISPR spacer
ccgtcggacgcgcgcgacgccgagaccggcgaacg	Protospacer
*.********* ******* *********.*  **

8. spacer 5.21|1419110|35|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MK494089 (Mycobacterium phage Ibrahim, complete genome) position: , mismatch: 6, identity: 0.829

ctgtcggacgcccgcgacgacgagaccggtgcccg	CRISPR spacer
ccgtcggacgcgcgcgacgccgagaccggcgaacg	Protospacer
*.********* ******* *********.*  **

9. spacer 5.21|1419110|35|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NC_024135 (Mycobacterium phage Bernal13, complete genome) position: , mismatch: 6, identity: 0.829

ctgtcggacgcccgcgacgacgagaccggtgcccg	CRISPR spacer
ccgtcggacgcgcgcgacgccgagaccggcgaacg	Protospacer
*.********* ******* *********.*  **

10. spacer 5.21|1419110|35|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MG925349 (Mycobacterium phage Mendokysei, complete genome) position: , mismatch: 6, identity: 0.829

ctgtcggacgcccgcgacgacgagaccggtgcccg	CRISPR spacer
ccgtcggacgcgcgcgacgccgagaccggcgaacg	Protospacer
*.********* ******* *********.*  **

11. spacer 5.21|1419110|35|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to KM591905 (Mycobacterium phage RonRayGun, complete genome) position: , mismatch: 6, identity: 0.829

ctgtcggacgcccgcgacgacgagaccggtgcccg	CRISPR spacer
ccgtcggacgcgcgcgacgccgagaccggcgaacg	Protospacer
*.********* ******* *********.*  **

12. spacer 5.21|1419110|35|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MN735432 (Mycobacteriophage Whitty, complete genome) position: , mismatch: 6, identity: 0.829

ctgtcggacgcccgcgacgacgagaccggtgcccg	CRISPR spacer
ccgtcggacgcgcgcgacgccgagaccggcgaacg	Protospacer
*.********* ******* *********.*  **

13. spacer 5.56|1421676|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011046 (Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid pCI3, complete sequence) position: , mismatch: 6, identity: 0.818

cacgctggaactggagcgggagctgcgcaccgt	CRISPR spacer
agcgctggagctggagctggagctgcgcacact	Protospacer
 .*******.******* ************  *

14. spacer 5.56|1421676|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021037 (Clavibacter michiganensis subsp. insidiosus strain R1-3 plasmid pCI3, complete sequence) position: , mismatch: 6, identity: 0.818

cacgctggaactggagcgggagctgcgcaccgt	CRISPR spacer
agcgctggagctggagctggagctgcgcacact	Protospacer
 .*******.******* ************  *

15. spacer 8.1|1893360|31|CP027433|CRISPRCasFinder matches to MT723938 (Gordonia phage Bunnybear, complete genome) position: , mismatch: 6, identity: 0.806

-ccgtcgaggggcccgctcgaccgtcgggggc	CRISPR spacer
accagc-aggggcccgctcgaccgtccggcgg	Protospacer
 **. * ******************* ** *

16. spacer 5.42|1420647|38|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MN175604 (Gordonia phage PhorbesPhlower, complete genome) position: , mismatch: 7, identity: 0.816

tcgaatgcgtccgggcagatgggcggcgtttttctgct	CRISPR spacer
tcgaatgcgtcggggcagatgggtggcgtggagccgct	Protospacer
*********** ***********.*****    *.***

17. spacer 5.53|1421460|34|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 7, identity: 0.794

acactctgccttcgccctcgacgagctcgatgtc	CRISPR spacer
cctggctgcctgcgccctcgacgacctcgatgcc	Protospacer
 *   ****** ************ *******.*

18. spacer 5.56|1421676|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 7, identity: 0.788

cacgctggaactggagcgggagctgcgcaccgt	CRISPR spacer
cgtggaggaactggagcgggaggcgcgcaccga	Protospacer
*..*  **************** .********

19. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT703506 (Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 2) position: , mismatch: 7, identity: 0.788

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
cagggtggcggggtgaccgaggtcggcggcgcg	Protospacer
*  * *****.**** ***************

20. spacer 9.1|2463374|28|CP027433|CRISPRCasFinder matches to NZ_CP026519 (Deinococcus sp. NW-56 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.75

cccttgagcacccgccgccccttgagca	CRISPR spacer
agcagcagcacccgccgccccttcagcc	Protospacer
  *   ***************** ***

21. spacer 5.56|1421676|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.758

cacgctggaactggagcgggagctgcgcaccgt	CRISPR spacer
cgtggaagaactggagcgggaggcgcgcaccga	Protospacer
*..*  .*************** .********

22. spacer 5.56|1421676|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.758

cacgctggaactggagcgggagctgcgcaccgt	CRISPR spacer
cgtggaagaactggagcgggaggcgcgcaccga	Protospacer
*..*  .*************** .********

23. spacer 5.56|1421676|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 8, identity: 0.758

cacgctggaactggagcgggagctgcgcaccgt	CRISPR spacer
cgtggaagaactggagcgggaggcgcgcaccga	Protospacer
*..*  .*************** .********

24. spacer 5.101|1424979|31|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MK359313 (Gordonia phage Vasanti, complete genome) position: , mismatch: 8, identity: 0.742

ttcggtgctggtcatactgcgttctctctca	CRISPR spacer
ttcggtgctggtcatgctgcgttgctctcct	Protospacer
***************.******* .....*

25. spacer 5.101|1424979|31|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MN234161 (Gordonia phage Toast, complete genome) position: , mismatch: 8, identity: 0.742

ttcggtgctggtcatactgcgttctctctca	CRISPR spacer
ttcggtgctggtcatgctgcgttggtctcct	Protospacer
***************.*******  ....*

26. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MN096378 (Microbacterium phage MCubed, complete genome) position: , mismatch: 8, identity: 0.758

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
gccgctagcaaggtgcccgaggtcggcgctgac	Protospacer
 ..***.**.****************** .**.

27. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MH513982 (Microbacterium phage Sansa, complete genome) position: , mismatch: 8, identity: 0.758

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
gccgctagcaaggtgcccgaggtcggcgctgac	Protospacer
 ..***.**.****************** .**.

28. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to KM233261 (Sulfitobacter phage NYA-2014a, complete genome) position: , mismatch: 8, identity: 0.758

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
attgctggcaaggtgcccgaggtgggggagaac	Protospacer
 ********.************* ** *. .*.

29. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026305 (Streptomyces lunaelactis strain MM109 plasmid pSLUN1, complete sequence) position: , mismatch: 8, identity: 0.758

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
cccgccctcgaggtgcccgtggccggcggcgaa	Protospacer
*..**.  *********** **.*********

30. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006990 (Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence) position: , mismatch: 8, identity: 0.758

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
cggccagtcgaggtggccgaggccggcggcgaa	Protospacer
*   * * ******* ******.*********

31. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 8, identity: 0.758

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
cggccagtcgaggtggccgaggccggcggcgaa	Protospacer
*   * * ******* ******.*********

32. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MH536815 (Streptomyces phage Crosby, complete genome) position: , mismatch: 8, identity: 0.758

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
catgctcgcgaggcgcccgaggtcggtccagag	Protospacer
* **** ******.************.   **

33. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MH229864 (Streptomyces phage UNTPL, complete genome) position: , mismatch: 8, identity: 0.758

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
catgctcgcgaggcgcccgaggtcggtccagag	Protospacer
* **** ******.************.   **

34. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MN224565 (Streptomyces phage Intolerant, complete genome) position: , mismatch: 8, identity: 0.758

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
catgctcgcgaggcgcccgaggtcggtccagag	Protospacer
* **** ******.************.   **

35. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MH825706 (Streptomyces phage Microdon, complete genome) position: , mismatch: 8, identity: 0.758

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
catgctcgcgaggcgcccgaggtcggtccagag	Protospacer
* **** ******.************.   **

36. spacer 5.21|1419110|35|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MN234196 (Gordonia phage CloverMinnie, complete genome) position: , mismatch: 9, identity: 0.743

ctgtcggacgcccgcgacgacgagaccggtgcccg	CRISPR spacer
cagcgtggtgcccgcgacgacgagggcggtgccca	Protospacer
* *.  *..***************. ********.

37. spacer 5.42|1420647|38|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to AM491333 (Archaeal BJ1 virus V1(partial), V2-V9 and V10(partial) genes, isolate mutant 5'-3'(AM419438-ORF32-nucleotide 14790) insertion) position: , mismatch: 9, identity: 0.763

-tcgaatgcgtccgggcagatgggcggcgtttttctgct	CRISPR spacer
ctcggccat-cccgggcagatgggtggcgtttttcagct	Protospacer
 ***. ... .*************.********** ***

38. spacer 5.53|1421460|34|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 9, identity: 0.735

acactctgcc------ttcgccctcgacgagctcgatgtc	CRISPR spacer
------cgccgagggtttcgccctcgacgagaacgatgtc	Protospacer
      .***      ***************  *******

39. spacer 5.54|1421530|34|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to AF394895 (Actinophage Q5 replication protein gene, partial cds) position: , mismatch: 9, identity: 0.735

gctccaaacgctccggctccataccggcctgttg	CRISPR spacer
gctccatacggtccggctccataccggtggcaca	Protospacer
****** *** ****************.    ..

40. spacer 5.56|1421676|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017887 (Pseudomonas frederiksbergensis strain ERDD5:01 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

cacgctggaactggagcgggagctgcgcaccgt	CRISPR spacer
catcctggaactggagcgtgaactgcgccgtaa	Protospacer
**. ************** **.******  ..

41. spacer 5.56|1421676|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017887 (Pseudomonas frederiksbergensis strain ERDD5:01 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

cacgctggaactggagcgggagctgcgcaccgt	CRISPR spacer
catcctggaactggagcgtgaactgcgccgtaa	Protospacer
**. ************** **.******  ..

42. spacer 5.56|1421676|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

cacgctggaactggagcgggagctgcgcaccgt	CRISPR spacer
cgccgtggaactggtgcaggagctgcgcaagcg	Protospacer
*.*  ********* **.***********

43. spacer 5.63|1422189|34|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011296 (Rhodococcus erythropolis strain BG43 plasmid pRLCBG43, complete sequence) position: , mismatch: 9, identity: 0.735

ccacaccgacacggtcaccgaccgccgggatcgc	CRISPR spacer
ggtcaccgatacggtctccgaccgccgccatgcc	Protospacer
   ******.****** **********  **  *

44. spacer 5.94|1424472|35|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MK494090 (Mycobacterium phage Jordennis, complete genome) position: , mismatch: 9, identity: 0.743

gtgccgtcctcgttgtcctcgatctcgggttcaac	CRISPR spacer
tcagcgtcctcgtcgtcctcgatctcggggagatc	Protospacer
 .. *********.***************   * *

45. spacer 5.94|1424472|35|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MH744423 (Mycobacterium phage Saguaro, complete genome) position: , mismatch: 9, identity: 0.743

gtgccgtcctcgttgtcctcgatctcgggttcaac	CRISPR spacer
gtgccgtcctcgttctgctcgatctgcgcgccgat	Protospacer
************** * ********  *  .*.*.

46. spacer 5.101|1424979|31|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MN234179 (Gordonia phage Pipp, complete genome) position: , mismatch: 9, identity: 0.71

ttcggtgctggtcatactgcgttctctctca	CRISPR spacer
ctcggtgctggtcatgctgcgttgctctcct	Protospacer
.**************.******* .....*

47. spacer 5.101|1424979|31|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MH479927 (Gordonia phage TimTam, complete genome) position: , mismatch: 9, identity: 0.71

ttcggtgctggtcatactgcgttctctctca	CRISPR spacer
ctcggtgctggtcatgctgcgttgctctcct	Protospacer
.**************.******* .....*

48. spacer 5.101|1424979|31|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to KU963255 (Gordonia phage Nymphadora, complete genome) position: , mismatch: 9, identity: 0.71

ttcggtgctggtcatactgcgttctctctca	CRISPR spacer
ctcggtgctggtcatgctgcgttgctctcct	Protospacer
.**************.******* .....*

49. spacer 5.101|1424979|31|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MH479912 (Gordonia phage Eviarto, complete genome) position: , mismatch: 9, identity: 0.71

ttcggtgctggtcatactgcgttctctctca	CRISPR spacer
ctcggtgctggtcatgctgcgttgctctcct	Protospacer
.**************.******* .....*

50. spacer 5.101|1424979|31|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MK501729 (Gordonia phage Walrus, complete genome) position: , mismatch: 9, identity: 0.71

ttcggtgctggtcatactgcgttctctctca	CRISPR spacer
ctcggtgctggtcatgctgcgttgctctcct	Protospacer
.**************.******* .....*

51. spacer 5.101|1424979|31|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to KX557273 (Gordonia phage BatStarr, complete genome) position: , mismatch: 9, identity: 0.71

ttcggtgctggtcatactgcgttctctctca	CRISPR spacer
ctcggtgctggtcatgctgcgttgctctcct	Protospacer
.**************.******* .....*

52. spacer 5.101|1424979|31|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to KU963251 (Gordonia phage UmaThurman, complete genome) position: , mismatch: 9, identity: 0.71

ttcggtgctggtcatactgcgttctctctca	CRISPR spacer
ttcggtgctgctcatgctgcgttgctctcct	Protospacer
********** ****.******* .....*

53. spacer 5.101|1424979|31|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MH153808 (Gordonia phage Petra, complete genome) position: , mismatch: 9, identity: 0.71

ttcggtgctggtcatactgcgttctctctca	CRISPR spacer
ttcggtgctgctcatgctgcgttgctctcct	Protospacer
********** ****.******* .....*

54. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NC_014811 (Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence) position: , mismatch: 9, identity: 0.727

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
cagcgtggcggggtggccgaggtcggcggcacg	Protospacer
*    *****.**** **************.

55. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032156 (Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence) position: , mismatch: 9, identity: 0.727

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
cagcgtggcggggtggccgaggtcggcggcacg	Protospacer
*    *****.**** **************.

56. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 9, identity: 0.727

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
ccgcaccgtgaggtgccagagggcggcggcgat	Protospacer
*.   . *.******** **** **********

57. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 9, identity: 0.727

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
ggcgacggccaggtggccgaggtcggcggccag	Protospacer
  .* .*** ***** ************** *

58. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 9, identity: 0.727

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
ggcgacggccaggtggccgaggtcggcggccag	Protospacer
  .* .*** ***** ************** *

59. spacer 5.4|1417866|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018573 (Marivivens sp. JLT3646 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

gacgccatcagatcggagacgtcctcccacgag	CRISPR spacer
gcgaccatcagatcggcgatgtcctcccgtcgc	Protospacer
*  .************ **.********.. .

60. spacer 5.22|1419181|35|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.714

gtaagcggcgtacggtatccgctgatcgagtaatc	CRISPR spacer
gcgcgcggcgttcggtatccgctgctcgatagaag	Protospacer
*.. ******* ************ ****  .*

61. spacer 5.22|1419181|35|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.714

gtaagcggcgtacggtatccgctgatcgagtaatc	CRISPR spacer
gcgcgcggcgttcggtatccgctgctcgatagaag	Protospacer
*.. ******* ************ ****  .*

62. spacer 5.22|1419181|35|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MK433272 (Gordonia phage IDyn, complete genome) position: , mismatch: 10, identity: 0.714

gtaagcggcgtacggtatccgctgatcgagtaatc	CRISPR spacer
ccatccggcggacggtatccgccgatcgagctgac	Protospacer
 .*  ***** ***********.*******. . *

63. spacer 5.22|1419181|35|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MK376954 (Gordonia phage WhoseManz, complete genome) position: , mismatch: 10, identity: 0.714

gtaagcggcgtacggtatccgctgatcgagtaatc	CRISPR spacer
ccatccggcggacggtatccgccgatcgagctgac	Protospacer
 .*  ***** ***********.*******. . *

64. spacer 5.22|1419181|35|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MH669007 (Gordonia phage Marietta, complete genome) position: , mismatch: 10, identity: 0.714

gtaagcggcgtacggtatccgctgatcgagtaatc	CRISPR spacer
ccatccggcggacggtatccgccgatcgagctgac	Protospacer
 .*  ***** ***********.*******. . *

65. spacer 5.53|1421460|34|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594664 (Variovorax sp. RA8 plasmid 3) position: , mismatch: 10, identity: 0.706

acactctgccttcgccctcgacgagctcgatgtc	CRISPR spacer
gaaagagcgcttcgccctcgatgagctcgatgtg	Protospacer
. *      ************.***********

66. spacer 5.53|1421460|34|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041605 (Streptomyces sp. S1D4-14 plasmid pS1D4-14.1, complete sequence) position: , mismatch: 10, identity: 0.706

acactctgccttcgccctcgacgagctcgatgtc	CRISPR spacer
cagccacaccttcgcccgcgacgaactcgatgcc	Protospacer
  .*. ..********* ******.*******.*

67. spacer 5.56|1421676|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NC_009939 (Deinococcus geothermalis DSM 11300 plasmid pDGEO02, complete sequence) position: , mismatch: 10, identity: 0.697

cacgctggaactggagcgggagctgcgcaccgt	CRISPR spacer
ggcgctgcaactggagcgggtgctgccggacag	Protospacer
 .***** ************ *****  . *.

68. spacer 5.63|1422189|34|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042263 (Litoreibacter sp. LN3S51 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

ccacaccgacacggtcaccgaccgccgggatcgc	CRISPR spacer
tgtcgccgacacggtcatcgacagccgggtgccg	Protospacer
.  *.************.**** ******  *

69. spacer 5.63|1422189|34|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to LN997845 (Streptomyces reticuli genome assembly TUE45, plasmid : IV) position: , mismatch: 10, identity: 0.706

ccacaccgacacggtcaccgaccgccgggatcgc	CRISPR spacer
cgtcctcgacacggtcgccgcccgccgggaattg	Protospacer
*  * .**********.*** ********* .

70. spacer 5.94|1424472|35|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to MT639646 (Microbacterium phage Rasputia, complete genome) position: , mismatch: 10, identity: 0.714

gtgccgtcctcgttgtcctcgatctcgggttcaac	CRISPR spacer
ccgccgtcctcgtagacctcgatctcgccgtagaa	Protospacer
 .*********** * ***********   * .*

71. spacer 5.98|1424758|39|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 10, identity: 0.744

atcccgtgccgcctgcgcctgagccaccaccgccgggtc	CRISPR spacer
cagcggcagggcctgcgcctgggccaccagcgccgggtc	Protospacer
   * *..  ***********.******* *********

72. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035092 (Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
gaggggcgcgagttgcccgagggcggcggcgcg	Protospacer
   *   ***** ********* ********

73. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NC_008688 (Paracoccus denitrificans PD1222 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.697

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
gaggggcgcgagttgcccgagggcggcggcgcg	Protospacer
   *   ***** ********* ********

74. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011665 (Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence) position: , mismatch: 10, identity: 0.697

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
gcggtgagcgaggtgcccggggtcagcggcggg	Protospacer
 . *. .************.****.******.

75. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 10, identity: 0.697

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
gccgtgagcgaggtgcccggggtcagcggcggg	Protospacer
 ..*. .************.****.******.

76. spacer 5.102|1425046|33|CP027433|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 11, identity: 0.667

cttgctggcgaggtgcccgaggtcggcggcgat	CRISPR spacer
gggatcaccgaggtgcccgaagtccgcggcgac	Protospacer
   .... ************.*** *******.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2623 : 19132

Gordonia_phage(66.67%)

integrase

attL 15888:15903|attR 28996:29011

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVL98903.1\|2623_3319_-	DNA polymerase III subunit epsilon	A0A0K0MWI1	Gordonia_phage	2.7e-50	47.4
AVL98904.1\|3315_3783_-	HNH endonuclease	A0A076YKQ7	Mycobacterium_phage	6.0e-22	47.8
AVL98905.1\|3902_4301_-	hypothetical protein	NA	NA	NA	NA
AVL98906.1\|4297_4501_-	hypothetical protein	NA	NA	NA	NA
AVL98907.1\|4673_4907_-	hypothetical protein	NA	NA	NA	NA
AVL98908.1\|4948_5269_-	hypothetical protein	NA	NA	NA	NA
AVL98909.1\|5904_6459_-	hypothetical protein	A0A1B3B1S9	Gordonia_phage	1.1e-22	41.6
AVL98910.1\|6455_7013_-	hypothetical protein	A0A1B1INA7	uncultured_Mediterranean_phage	1.0e-15	47.5
AVL98911.1\|7121_7718_-	hypothetical protein	A0A2H4PEZ3	Gordonia_phage	1.6e-40	54.4
AVL98912.1\|7714_8059_-	hypothetical protein	A0A2P1A0W8	Gordonia_phage	4.5e-19	52.3
AVL98913.1\|8336_8807_+	hypothetical protein	NA	NA	NA	NA
AVL98914.1\|8971_9439_-	hypothetical protein	NA	NA	NA	NA
AVL98915.1\|9442_9871_-	hypothetical protein	A0A166Y2P9	Gordonia_phage	2.9e-23	52.0
AVL98916.1\|9867_10368_-	hypothetical protein	A0A0U4JVV9	Gordonia_phage	3.7e-38	51.8
AVL98917.1\|10371_11391_-	recombinase RecT	W0LPX4	Mycobacterium_phage	3.5e-91	66.3
AVL98918.1\|11345_11660_-	hypothetical protein	NA	NA	NA	NA
AVL98919.1\|11656_12112_-	hypothetical protein	NA	NA	NA	NA
AVL98920.1\|12108_13893_-	DNA methyltransferase	A0A1B3AYU4	Gordonia_phage	3.8e-218	65.5
AVL98921.1\|13889_14957_-	hypothetical protein	A0A142KAA6	Gordonia_phage	2.9e-80	46.5
AVL98922.1\|15138_15450_-	hypothetical protein	NA	NA	NA	NA
AVL98923.1\|15745_15988_-	hypothetical protein	NA	NA	NA	NA
15888:15903	attL	NA	NA	NA	NA
AVL98924.1\|15984_16236_-	transcriptional regulator	A0A1W6JQ99	Corynebacterium_phage	5.6e-11	48.4
AVL98925.1\|16392_16992_+	hypothetical protein	A0A1W6JQ81	Corynebacterium_phage	2.9e-13	43.6
AVL98926.1\|16988_17423_+	hypothetical protein	A0A0K0N6M2	Gordonia_phage	4.2e-46	62.4
AVL98927.1\|17438_17891_+	hypothetical protein	NA	NA	NA	NA
AVL98928.1\|17890_19132_+\|integrase	site-specific integrase	A0A0K0N5T7	Gordonia_phage	9.6e-144	62.7
28996:29011	attR	NA	NA	NA	NA

DBSCAN-SWA_2

2374231 : 2418630

Aeromonas_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVM00703.1\|2374231_2375737_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
AVM02175.1\|2375816_2376964_-\|transposase	IS3 family transposase	NA	NA	NA	NA
AVM00704.1\|2378378_2379179_+	resolvase	A0A219YB42	Aeromonas_phage	2.0e-25	41.0
AVM00705.1\|2379322_2380894_-	MFS transporter	NA	NA	NA	NA
AVM00706.1\|2380984_2381698_+	TetR family transcriptional regulator	NA	NA	NA	NA
AVM00707.1\|2381970_2382225_+\|transposase	IS3 family transposase	NA	NA	NA	NA
AVM00708.1\|2382850_2384155_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	3.9e-10	27.4
AVM02176.1\|2384350_2385757_-	recombinase XerD	NA	NA	NA	NA
AVM00709.1\|2385871_2386207_-	XRE family transcriptional regulator	NA	NA	NA	NA
AVM00710.1\|2386863_2387922_-\|transposase	IS630 family transposase	NA	NA	NA	NA
AVM00711.1\|2388737_2389523_+	hypothetical protein	NA	NA	NA	NA
AVM00712.1\|2389594_2389885_-	hypothetical protein	NA	NA	NA	NA
AVM00713.1\|2390041_2391526_+	hypothetical protein	NA	NA	NA	NA
AVM00714.1\|2391467_2392562_+	hypothetical protein	NA	NA	NA	NA
AVM00715.1\|2395250_2396690_+	hydrolase Nlp/P60	A0A0K0NL58	Gordonia_phage	4.7e-25	46.2
AVM00716.1\|2396862_2398872_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.1e-104	39.7
AVM00717.1\|2398864_2399269_-	transcriptional regulator	NA	NA	NA	NA
AVM00718.1\|2399384_2400101_-	DUF3093 domain-containing protein	NA	NA	NA	NA
AVM00719.1\|2400018_2401305_-	hypothetical protein	NA	NA	NA	NA
AVM00720.1\|2401364_2402306_-	cation transporter	NA	NA	NA	NA
AVM02177.1\|2402308_2402689_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AVM00721.1\|2402777_2403494_-	transglutaminase	NA	NA	NA	NA
AVM02178.1\|2403549_2404356_-	AraC family transcriptional regulator	NA	NA	NA	NA
AVM00722.1\|2404768_2406622_-	hypothetical protein	NA	NA	NA	NA
AVM00723.1\|2407012_2408191_+	hypothetical protein	NA	NA	NA	NA
AVM00724.1\|2408206_2409037_-	hypothetical protein	NA	NA	NA	NA
AVM00725.1\|2409230_2410904_-	cytochrome C biogenesis protein ResB	NA	NA	NA	NA
AVM00726.1\|2410967_2411567_-	vitamin K epoxide reductase	NA	NA	NA	NA
AVM00727.1\|2411559_2412216_-	disulfide bond formation protein DsbA	NA	NA	NA	NA
AVM00728.1\|2412407_2412959_+	copper resistance protein CopC	NA	NA	NA	NA
AVM00729.1\|2413126_2415205_+	copper resistance protein CopD	NA	NA	NA	NA
AVM00730.1\|2415308_2416112_-	cytochrome C biogenesis protein ResC	NA	NA	NA	NA
AVM02179.1\|2416111_2416660_-	alkyl hydroperoxide reductase	NA	NA	NA	NA
AVM00731.1\|2417453_2418630_+\|transposase	transposase	U5P429	Shigella_phage	4.7e-31	32.1

DBSCAN-SWA_3

3968136 : 3998031

Gordonia_phage(78.95%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVM01864.1\|3968136_3969027_-	hypothetical protein	A0A166Y2F2	Gordonia_phage	3.2e-56	43.9
AVM01865.1\|3969078_3969570_-	hypothetical protein	NA	NA	NA	NA
AVM01866.1\|3969539_3969980_-	hypothetical protein	A0A2D2W4M4	Gordonia_phage	4.2e-17	39.1
AVM01867.1\|3969976_3970222_-	Holin	A0A2P1N2V5	Mycobacterium_phage	5.7e-08	53.4
AVM01868.1\|3970218_3971937_-	hypothetical protein	F1B2S6	Tsukamurella_phage	2.5e-81	48.0
AVM01869.1\|3972524_3972638_-	hypothetical protein	NA	NA	NA	NA
AVM01870.1\|3972763_3974398_-	restriction endonuclease subunit M	G8I4P9	Mycobacterium_phage	1.5e-200	62.5
AVM01871.1\|3974461_3974827_-	hypothetical protein	A0A0E3X9Z9	Gordonia_phage	7.7e-25	52.1
AVM01872.1\|3974829_3975075_-	hypothetical protein	NA	NA	NA	NA
AVM01873.1\|3975053_3976064_-	hypothetical protein	NA	NA	NA	NA
AVM01874.1\|3976175_3976451_-	hypothetical protein	NA	NA	NA	NA
AVM01875.1\|3976866_3977094_+	hypothetical protein	NA	NA	NA	NA
AVM01876.1\|3977094_3977289_+	hypothetical protein	NA	NA	NA	NA
AVM01877.1\|3977494_3979306_-	hypothetical protein	A0A0K0N561	Tsukamurella_phage	2.5e-55	30.9
AVM01878.1\|3979302_3979857_-	hypothetical protein	A0A1B3B1N6	Gordonia_phage	9.2e-38	49.5
AVM01879.1\|3979856_3981632_-	hypothetical protein	A0A166Y248	Gordonia_phage	1.3e-213	60.2
AVM01880.1\|3981631_3982588_-	hypothetical protein	A0A1B3B1P4	Gordonia_phage	4.0e-89	50.7
AVM01881.1\|3982584_3987216_-	hypothetical protein	A0A0K0MWQ5	Gordonia_phage	5.0e-04	33.5
AVM01882.1\|3987291_3987897_-	hypothetical protein	NA	NA	NA	NA
AVM01883.1\|3987896_3988571_-	hypothetical protein	NA	NA	NA	NA
AVM01884.1\|3988584_3989031_-	hypothetical protein	A0A1B3B1M3	Gordonia_phage	1.9e-38	54.7
AVM01885.1\|3989030_3989399_-	hypothetical protein	NA	NA	NA	NA
AVM01886.1\|3989564_3990086_-	hypothetical protein	A0A1B3B1N9	Gordonia_phage	1.8e-27	40.7
AVM01887.1\|3990082_3990862_-	hypothetical protein	A0A166Y1Z2	Gordonia_phage	3.6e-64	50.4
AVM01888.1\|3990947_3991652_-	hypothetical protein	A0A142K9S2	Gordonia_phage	4.1e-51	47.4
AVM01889.1\|3991731_3991971_-	hypothetical protein	NA	NA	NA	NA
AVM01890.1\|3991970_3992783_-	hypothetical protein	A0A0K0MX97	Gordonia_phage	1.4e-42	41.9
AVM01891.1\|3992864_3994691_-	hypothetical protein	A0A1B3B1T8	Gordonia_phage	3.3e-124	51.3
AVM01892.1\|3994925_3995192_-	hypothetical protein	NA	NA	NA	NA
AVM01893.1\|3995188_3996124_-	hypothetical protein	A0A0K0MX90	Gordonia_phage	5.5e-27	34.7
AVM01894.1\|3996249_3998031_-	hypothetical protein	A0A161HSU2	Gordonia_phage	6.1e-75	68.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP027433

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection