CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP027241	Lachnospiraceae bacterium oral taxon 500 strain W11650 chromosome, complete genome	10 crisprs	csx1,csn2,cas2,cas1,cas9,PD-DExK,cas3,WYL,csa3,RT	0	6	8	0

1. CP027241

CRISPR-Cas detection and classification

Crispr_ID: CP027241_1

• CRISPR_ID: CP027241_1
• CRISPR_location: 491031-491104
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP027241_1

Consensus_repeat	Method
TCTGATATTTTCCGGCTCTGATATTT	CRISPRCasFinder

spacers of CP027241_1

>1.1|491057|22|CP027241|CRISPRCasFinder
CCCATTTCTAATATTTTCTCGT

CRISPR arrays and Neighbor proteins around CP027241_1

CRISPR arrays

The CRISPR arrays of CP027241_1

>merge|CP027241|1|491031-491104|CRISPRCasFinder
TCTGATATTTTCCGGCTCTGATATTTCCCATTTCTAATATTTTCTCGTTCTGATATTTTCCGGCTCTGATATCT

>CP027241|1|1|491031-491104|CRISPRCasFinder
TCTGATATTTTCCGGCTCTGATATTT	CCCATTTCTAATATTTTCTCGT
TCTGATATTTTCCGGCTCTGATATCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP027241.1|AVM68198.1|501771_503907_-|hypothetical-protein	unknown	unknown	gnl|CDD|227095
CP027241.1|AVM68189.1|487841_488702_-|hypothetical-protein	unknown	unknown	gnl|CDD|379553
CP027241.1|AVM70408.1|484111_484798_-|di-trans,poly-cis-decaprenylcistransferase	unknown	unknown	gnl|CDD|376506
CP027241.1|AVM70410.1|491697_491886_+|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM70409.1|486836_487256_+|rhodanese-like-domain-containing-protein	unknown	unknown	gnl|CDD|238089
CP027241.1|AVM70411.1|499734_500568_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
CP027241.1|AVM68188.1|487426_487870_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl|CDD|376771
CP027241.1|AVM68190.1|488851_490987_-|RNA-binding-transcriptional-accessory-protein	unknown	unknown	gnl|CDD|225094
CP027241.1|AVM68183.1|482015_483095_-|RIP-metalloprotease-RseP	unknown	unknown	gnl|CDD|308008
CP027241.1|AVM68192.1|493318_493672_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl|CDD|377579
CP027241.1|AVM68197.1|500645_501596_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|226666
CP027241.1|AVM68184.1|483291_484200_-|phosphatidate-cytidylyltransferase	unknown	unknown	gnl|CDD|366491
CP027241.1|AVM68191.1|492764_493217_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
CP027241.1|AVM68195.1|496010_497573_-|sulfatase-YidJ	unknown	unknown	gnl|CDD|293757
CP027241.1|AVM68187.1|485570_486278_-|UMP-kinase	unknown	unknown	gnl|CDD|239787
CP027241.1|AVM68193.1|493668_493962_+|transcriptional-regulator	unknown	unknown	gnl|CDD|238045
CP027241.1|AVM68185.1|484845_485400_-|ribosome-recycling-factor	unknown	unknown	gnl|CDD|178850
CP027241.1|AVM68186.1|485392_485584_-|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM68196.1|497791_499453_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|270302
CP027241.1|AVM68194.1|494023_495799_+|oligoendopeptidase-F	unknown	unknown	gnl|CDD|341070

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP027241.1|AVM68198.1|501771_503907_-|hypothetical-protein	gnl|CDD|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	1.25748e-20
CP027241.1|AVM68189.1|487841_488702_-|hypothetical-protein	gnl|CDD|379553	pfam14317, YcxB, YcxB-like protein. The YcxB-like protein family includes the B. subtilis YcxB protein, which is a functionally uncharacterized transmembrane protein. This family of proteins is found in bacteria, and is approximately 60 amino acids in length.	1.18255e-07
CP027241.1|AVM70408.1|484111_484798_-|di-trans,poly-cis-decaprenylcistransferase	gnl|CDD|376506	pfam01255, Prenyltransf, Putative undecaprenyl diphosphate synthase. Previously known as uncharacterized protein family UPF0015, a single member of this family has been identified as an undecaprenyl diphosphate synthase.	1.35481e-121
CP027241.1|AVM70409.1|486836_487256_+|rhodanese-like-domain-containing-protein	gnl|CDD|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	1.13033e-31
CP027241.1|AVM70411.1|499734_500568_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.62885e-53
CP027241.1|AVM68183.1|482015_483095_-|RIP-metalloprotease-RseP	gnl|CDD|308008	pfam02163, Peptidase_M50, Peptidase family M50.	1.84243e-58
CP027241.1|AVM68190.1|488851_490987_-|RNA-binding-transcriptional-accessory-protein	gnl|CDD|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
CP027241.1|AVM68188.1|487426_487870_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl|CDD|376771	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE. This family of proteins is involved in the synthesis of threonylcarbamoyl adenosine (t(6)A).	4.64755e-64
CP027241.1|AVM68192.1|493318_493672_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl|CDD|377579	pfam05973, Gp49, Phage derived protein Gp49-like (DUF891). This family consists of hypothetical bacterial proteins of unknown function as well as phage Gp49 proteins.	1.99406e-25
CP027241.1|AVM68184.1|483291_484200_-|phosphatidate-cytidylyltransferase	gnl|CDD|366491	pfam01148, CTP_transf_1, Cytidylyltransferase family. The members of this family are integral membrane protein cytidylyltransferases. The family includes phosphatidate cytidylyltransferase EC:2.7.7.41 as well as Sec59 from yeast. Sec59 is a dolichol kinase EC:2.7.1.108.	1.04993e-50
CP027241.1|AVM68191.1|492764_493217_+|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.62766e-15
CP027241.1|AVM68195.1|496010_497573_-|sulfatase-YidJ	gnl|CDD|293757	cd16033, sulfatase_like, uncharacterized sulfatase subfamily. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	2.00496e-73
CP027241.1|AVM68187.1|485570_486278_-|UMP-kinase	gnl|CDD|239787	cd04254, AAK_UMPK-PyrH-Ec, UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).	6.3606e-101
CP027241.1|AVM68193.1|493668_493962_+|transcriptional-regulator	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.3929e-13
CP027241.1|AVM68185.1|484845_485400_-|ribosome-recycling-factor	gnl|CDD|178850	PRK00083, frr, ribosome recycling factor; Reviewed.	1.10882e-98
CP027241.1|AVM68197.1|500645_501596_-|sugar-ABC-transporter-permease	gnl|CDD|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	2.63469e-114
CP027241.1|AVM68196.1|497791_499453_-|ABC-transporter-permease	gnl|CDD|270302	cd13584, PBP2_AlgQ1_2, Periplasmic-binding component of alginate-specific ABC uptake system; contains the type 2 periplasmic binding fold. This group represents the periplasmic-binding component of high molecular weight (HMW) alginate uptake system found in gram-negative soil bacteria such as Sphingomonas sp. A1. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that includes alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	1.2907e-114
CP027241.1|AVM68194.1|494023_495799_+|oligoendopeptidase-F	gnl|CDD|341070	cd09607, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF). Peptidase family M3B Oligopeptidase F (PepF; Pz-peptidase B; EC 3.4.24.-) is mostly bacterial and is similar to oligoendopeptidase F from Lactococcus lactis. This enzyme hydrolyzes peptides containing between 7 and 17 amino acids with fairly broad specificity. The PepF gene is duplicated in L. lactis on the plasmid that bears it, while a shortened second copy is found in Bacillus subtilis. Most bacterial PepFs are cytoplasmic endopeptidases; however, the Bacillus amyloliquefaciens PepF oligopeptidase is a secreted protein and may facilitate the process of sporulation. Specifically, the yjbG gene encoding the homolog of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when over-expressed from a multicopy plasmid.	0

Protein sequences

>CP027241.1|AVM68190.1|488851_490987_-|RNA-binding-transcriptional-accessory-protein
MNIQEKLVAEFQLKAWQVENTLKLIEEGNTIPFIARYRKELTGALSDDVLRDLHQRLTYLQGLEERKEQVLGLIEEQGKLTEELKAEILKAETLVEVEDLYLPYKQKRRTKATIAREKGLEPLAQAIMAGTGRAEVLAEAYINAEAGVETAAEALQGARDIIAEMVSEDSAARKYIRGYFSRFGKVVSKAKVEDAGVYQNYADYSEYLSGVAGHRILAINRGEKEKILSVKIDGEHEQMIKYLAKLWIKTEEPSCAAELQAAIEDSYKRLLFPSIEREIRTSFTEKAEEGAIKVFAKNLQQLLMQAPIAGHAVVALDPAFRTGVKTAVIDEFGKVLDTAVIYPTPPQSKVKEAKAVLKKLIEKHGADLIAIGNGTASRETESFVVELIGEMPQKLQYVIVNEAGASVYSASKLGSEEFPEYDVALRSAVSIGRRLQDPLAELVKIEPKAIGVGQYQHDMNQKTLGEALFGVVEDTVNRVGVNVNTASAPLLSYIAGISGKVAKNIVAYREENGKYQNRKELLKVSGLGNKSFEQAAGFLRVPDGTEALDNTGVHPESYQAARRLLEHLQIGDIRQEFQAFREKRKKIKDMKALAGELGVGEMTLEDICKELEKPGRDPREDMPAPVLRQDVLEISDLQEGMVLKGTVRNVIDFGAFVDIGVHQDGLVHISQMSKKFIKHPLEVVAVGDVVEVKVLSADPKTKRIGLSMLIN
>CP027241.1|AVM68189.1|487841_488702_-|hypothetical-protein
MNQEWKIEVKLTVEDIFFFLLRHSFSTWQGKLTWGLGVAALIGAPVVAAVWKDAFTAIIFLLVALIYLVISPLSLYTNAKRQMISNSVFKNKIIFTIDSEMLQIKQYTGEAKLFWHQLEAMDLNGKSYLLYVNSKQAFILPKRCIAEEDAADLEQLLKEKQVEMGTRRPEETGGDRQKIKPEPKDKKAQQVQQDQKDKKTEKAEAQKQTKQEAEKPVTGRELPEIKEILIRTGQSTNQEEDSAAAEASEKAKTLPPESSKEAGRPVDIKKKSEPKKKNANNRNKNK
>CP027241.1|AVM68188.1|487426_487870_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MQIIETKTSKETRDLGRRLAESAPKGAVFALAGDLGVGKTVFSQGFAEGLGIEEPVSSPTFTLVNEYHQGRLPFFHFDVYRLEEPEELEAIGFEEYVYGQGVTLIEWADRFPELLPAQTVWIRIEKDYAQGEDYRRITIDQTVPDRA
>CP027241.1|AVM70409.1|486836_487256_+|rhodanese-like-domain-containing-protein
MAVLLFSACQSAQDSNSGNNSAANESAPASSDQTAKTAEYHKISAEEAKKMMDEQDVVIVDVRTAAEYAEGHIADAVLVPNETIGDEAPAELPNKDAVLLIYCRSGNRSRTAANKLLKLGYQNIYDFGGINTWPYEIVK
>CP027241.1|AVM68187.1|485570_486278_-|UMP-kinase
MSKYKRVLLKLSGETLSGGNTGKFDEAAALKVAEQVKKAADEGLQIGIVIGGGNFWRGRSSENMDRCKADAIGMMATVMNCLYAAAVFQMAGLESVVMTPFPVGTFTEVYSKDAMLDYLNKGKIIFFAGGTGHSYFSTDTAAALRAIQMNADMILLAKNIDGVYDKDPNQYPDAVRYDRLTVSEVVKKGLKVMDITAAQLCLENKMPMSVFFFGGENAILKAVSGSGDGTFIAAE
>CP027241.1|AVM68186.1|485392_485584_-|hypothetical-protein
MRLSSELVIEPKQPIMSGRQNPNDEKRRQTIIFGCGFDWQSEAESFKGNRANDKIIITEEKNG
>CP027241.1|AVM68185.1|484845_485400_-|ribosome-recycling-factor
MDSSVKVYQEKMTKTVSVLKDEFNAVRAGRANPHILDKITVDYYGQATPLQQVGNITVPEARMIQIQPWDASVIKAIEKALNMSDIGITPSSDGKVIRLVFPELTEEKRKELTKKVKHLGEEAKVAVRNIRRDAVQDFKKQEQDKLLTEDDLKDLETEIQELTDKFVKEIDKAVEEKTKEIMTV
>CP027241.1|AVM70408.1|484111_484798_-|di-trans,poly-cis-decaprenylcistransferase
MEDLQHIAIIMDGNRRWARKRLMPQTLGHQKGAETLEKVSRLVWDKGIRYLTVYAFSTENWKRSAKEVEYIMDLARKFLKTSIRDATQNNMRVRVIGNKKGLAEDIQAQIEELEQATAGFTGLNLQIALNYGGRDEIIRAAEKFWQAGGTAENLTEEAFAGYLDTAGIPDPELLIRTGGESRLSNYLLWQAAYSEIYVTDVFWPDFGETELDQAIGYYQTRNRRFGGE
>CP027241.1|AVM68184.1|483291_484200_-|phosphatidate-cytidylyltransferase
MFFGRTSEKQSWIRQLVIIRPETAGSEENKMKQRVLSSVVALPLVVAAIYFGGLSLFLLLGAAVMVGIFEFNRAFGYEDKKLLLSMTMLAAAVYIFLFYINKIGMAQTVFGFMLMTELAAYVLLYPKLQLRQVFINIVGFLYIPYMLTHVLLMRQSLVHGKVVVWLVILIAFGSDTFAYFTGVTLGRHKLAPILSPKKTIEGALGGILGSTLICLSYGLFLEWRGYFTLPLAAYASLALLGVLGSVFSQIGDLVGSAIKRETGIKDFGRLIPGHGGILDRLDSILFVAPFVYYFMLLLHRWN
>CP027241.1|AVM68183.1|482015_483095_-|RIP-metalloprotease-RseP
MNQAVGIVIAFLVFSFIVFFHEWGHFLLARRGGIGVEEFAIGMGPKLWGKKKGDTLYSIRLLPIGGFCAMLGEDSAGSGLSGTAAATIASDPRAFNNRPLKARILAVLAGPVFNFILAFIFAVILLLAAGAVTTTEISKVDPEYPAYQAGIQVGDKLLAINGHRILDPMEASTYLVVEGGQPVEVDVLRGAEKLRFTLTPKPVDRGGQTVYMIGIGYAYIQPNFLEVFYYALIKLLSMIKITAFSLFALITGKVSLNMLSGPVGIVNSLSKSYDGGMAIRQYIAIFSSQVVLLSANLGVMNLLPIPALDGGRLVFLFLEGLRGKPIDQKKEGYIHMAGFVLLMLLMAVIFYSDIVKLLT
>CP027241.1|AVM70410.1|491697_491886_+|hypothetical-protein
MSRQQLHTLIDTIDEKDIDLLQALLLKFIPSDIPLPDEIEAIKQGETDFKNKDIYTHDEVWG
>CP027241.1|AVM68191.1|492764_493217_+|MarR-family-transcriptional-regulator
MLEPLFVDVYDKFKLNFYKNIFKGFDRQKNPLTITESFCLEVIYSLKTPTISELSRYLGISQPNTTYKVNELIQKGYIEKKKDPLDKRRVLLYPTEKFTKYYSLKNQYVSTVCDRMRATFSAKDLQKLESMLATISNELMPEVSIKKEVE
>CP027241.1|AVM68192.1|493318_493672_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MFSVNFYREEDGSKPVGEFIRSLDVKMKAKVVSDLHRLEMLGNEARAPLSKYLGEDIFELRTILGTNIVRILYFFDEDEIIIATNGFVKKQQKTPQSEILLAKQRRTIYLKRKECER
>CP027241.1|AVM68193.1|493668_493962_+|transcriptional-regulator
MSDLQELTNELMQDTAFKKEYEALQPERDITMSIIRARKAAGLTQAELSQKTGISQADISRLENGSRNPSLALLNRIAEAMNSTLKIEFVPNKHLAK
>CP027241.1|AVM68194.1|494023_495799_+|oligoendopeptidase-F
MDKTKETKPEVFWDLTPLYTSFADPKLEADKKTLVEFCDHLLAQASALAAADSPVDACNRYLTTYNQALLLLDKLYNYGSLTYAVNTADSAALNLVEVLEGYFPKLSLAEAHFKMWLKELPDFNALLTAKELQAFHFYLNSARQSAAHTLSTAEEELFALLQNTGGNAWSKLQDQTVASLTGHFRGEDLVLSALRAKAYDQDPAVRREAYEAELACYPKMDTVSAACLNAIKGEAITAAAKRGYDSVLDMTLQKSHMDKETLQAMLTAMEESLPAFRKYFRKKAELLGHKNGLPFYDLFAPVGEVSMEYSYEQAKQYVIDNFSQFSPELGEFAAHAFAHDWIDVYPRKGKVSGAFCSEIKSLEESRIMTNFDGSLSDVYTLAHELGHGFHNYCMKGVAPVNSDSPMQLAETASIFCETIVANASLKEASPQEKVVILENDIMSTAQVIVDILSRYYFESELIEKRQNGSLSVDELKAAMIRAQKRTYGDGLDENYLHPYMWMCKPHYYSSNLNFYNFPYAFGELFAKGLYALYAKEGAGFVPKYKELLRSTGSRSTHDVLAIVGMDSHSPEFFRGSLALTIAKIEEWLKLV
>CP027241.1|AVM68195.1|496010_497573_-|sulfatase-YidJ
MKNILILICDQLSAKALKAYGNTDSETRAIDALADRGIVFERAYTPCPLCQPARASFWSSSYPHQNGVISNLPKQKQADFPDSITTLGEVFQKGGYECIHFGKEHDYGALRGFTKVVNEQKKTEPENPALPYDYETYFDIDTTEKAVRYLQQTAPNIDKPLLMAVDLQNPHNICAYIGAHAESGANHVPPEELPPLPDNFRDSDTHSRASFLQYLCCGHRRQSQTADWSEQDFQHYLHAYYYYLQKVDRQIGGVLSALKQSGKAEDTLIVFMADHGEGMAAHQIVTKSGTFYEETVRVPFVLQVPGRQPQRYDCLFSLIDLLPTLADYAGLPIPASAAGVSHWPTLLAELKSGQTDRKAAEFDNGQSPEKQGQPAVGCDRKPEGAEGSWPDYPTESYVVSQWHDEFEGYFVPARMYLTESYKYLAYQDKNGLEEELYDMSTDRLEQKNLAALPEYRLLLDHYRQDLQSYCVVSGDPFFQLKADYSDKYRQHPVGRHSGPNAVLEYQQRVNQAKQAAQAQV
>CP027241.1|AVM68196.1|497791_499453_-|ABC-transporter-permease
MKKKLSLMLALVLVVSLFAGCGKTEAPKTDDKKQETTAENKTDAKEDAKTESGKEDSKQEEAASSLVSDTPKTFSIFLNFNNMPFNSDWMIWKEIAKETNVSLEGVISQSNANEEEAFSMMLASGKLADIIGYKNPADLEKLGRDGGLIPLNDLIKEHAPDLQKVLDNDAKFRSFATSLDGNIYFIPKNLTLKSAEFWWIRQDWLDKLNLQAPTTIDELYEVLTAFRNNDPNGNGEKDEIPLFDRAAPKMQDEYLYMFDTSTEFYPHDGKIVYEPLMKDNFVLGVKTLAKWYKEGLIDPEIFTRGAKSRDTLYAANQAGFTHDWPSTGDYNVKLADSVPGFNNVAIAPMKNQNGQIIERTTRYPVAGWGISAQCQDPVTLIKFFNFFFTEKGSDMMNFGIEGVTYTKEADGTKAFTPLVMENPDFTPLNYLRSQGIQYRIGMVQNPAYEAAFAQPAAKEAAAYYESHPEWFPEKLPPYFDGALNLKYTPEDETEYQNIMSNVKPYVNQMLQEWILGTKDVEATYDEFVKELKNRKIERATEINQAAYETFLKR
>CP027241.1|AVM70411.1|499734_500568_-|carbohydrate-ABC-transporter-permease
MVAVGIIITILSLYPIYYVVIASLSRPLYVDGGEVMFWLKSPTIASYVAAAKKPGIWTAYANTIFYTAAGVLVNMFFTATMAYALSKKQLIFKKFFTLLTVFTLWFNAGIIPTYVNFVDFNLIDTRAAILFGFAINTYNLIILKSFFEQLPESIEEAAIIDGARNLSIFWRIYLPLSKPALATVGMFYAVTRWNGYFWAMSLLTSDTKVPLQVFLKKMIVDKVSNETDSAILTAASLSSPTTVIYATIVISIIPMLIVYPFVQKYFKSGATIGAVKG
>CP027241.1|AVM68197.1|500645_501596_-|sugar-ABC-transporter-permease
MEKQKNQKVKKIRKRELSLWKQFKRDGDLLILLLPGLLWYLLFAYRPMAGLRIAFYEYNIFRGIGGSRFVGLANFVQFLSGPDFSRTVVNTLMIALWQLVIVFPLPILLAIAITEMKNKWVSRLTQTATFLPYFISVVVVCGMVINFLSPSTGIINFFIKKLGGEATYFMTKPEYFRPIYTLMTLWQTAGFSSIVYIAAIMGIDPALYEAAKVDGATKLQQIWNVTLPGISPIVLVMLVLNIGKMVKVGFEAIILLYLPSTFSTADVIATYVYRTGLSNRNYGLATAAGLFEAIVALVLVVIANKLSKKVSQTSIW
>CP027241.1|AVM68198.1|501771_503907_-|hypothetical-protein
MKSKVIFQRYGKYQKKMYIMNLMLSLILTSILVPVIFGLVFQMNARDYRTAMDESVEKTLGNASLKSEIIAEALHTIEKSQELQSFLSASTRGEYYLYSSRLKDRLTRVSSRYLNAAFVLSITIPEKSASVITPYGTTGKESFAEEFFGDAGALAEQSEKLTARGNGASFSFERERVLHYMKYDRLQDRPYLIFLQVPLAELIDFAPAVSWNLADHQTIFAGRKNISYEQMQAIVSDGRELIESRKEVVFARWLDGLDWILTASYEKKKPDMAFFFFYFLLPFLALAALIAAVSSLITRSLYRPIKELVTETKSIVPADNEHDEIKLLKQGAAQAHQLSKDLRETLSEKERLLHYKQNRDLLFGILPPEADRKEGQLYVVAVFSLHNLASEEKCYLFKQYLQEKLESSAGVRYINTEDISCTLILEAESLEAARRFISEKLEDSPADAEVQIALSDPGFGMESIKTLYLQCSLLLQYKYLYRQQRFLSADLIPLKADENYSYPLAAENSLIQAVLRGNPESLKLFDRIISQNEKIMASAPQTQRRFVLMLTGTLHRILREFYMEIPLKYDLHELDEEWQNPEIFARIRQDISDILNFVASKEKQEDDDLAKTLLTYIEEHYHEDIMLVDLAEKINASEKYCSMLFKQSVGENFKTYLNNFRIERAKEILRAQPDAKISEVAERVGFNSANTFIRVFSKHVGLTPKAFAERE

Crispr_ID: CP027241_3

• CRISPR_ID: CP027241_3
• CRISPR_location: 544788-544888
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP027241_3

Consensus_repeat	Method
CCGGACGCTTGTTTTTTGTTTTCGCT	CRISPRCasFinder

spacers of CP027241_3

>3.1|544814|49|CP027241|CRISPRCasFinder
CAATTTTTCATAAAGCCCCAAAATATCCCAACGTTATTAAATTTACTTG

CRISPR arrays and Neighbor proteins around CP027241_3

CRISPR arrays

The CRISPR arrays of CP027241_3

>merge|CP027241|3|544788-544888|CRISPRCasFinder
CCGGACGCTTGTTTTTTGTTTTCGCTCAATTTTTCATAAAGCCCCAAAATATCCCAACGTTATTAAATTTACTTGCCGGATGCTTGTTTTTTGTTTTCGCT

>CP027241|3|2|544788-544888|CRISPRCasFinder
CCGGACGCTTGTTTTTTGTTTTCGCT	CAATTTTTCATAAAGCCCCAAAATATCCCAACGTTATTAAATTTACTTG
CCGGATGCTTGTTTTTTGTTTTCGCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP027241.1|AVM68235.1|547042_547522_+|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM68238.1|549410_549845_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379228
CP027241.1|AVM68233.1|544966_545962_+|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM68230.1|541206_541896_-|hypothetical-protein	unknown	unknown	gnl|CDD|378461
CP027241.1|AVM68231.1|542055_543495_-|iron-permease	unknown	unknown	gnl|CDD|223744
CP027241.1|AVM68228.1|538234_539527_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|226957
CP027241.1|AVM68240.1|550685_551102_-|flavodoxin	unknown	unknown	gnl|CDD|235508
CP027241.1|AVM68227.1|537023_538181_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|226957
CP027241.1|AVM68237.1|548865_549375_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
CP027241.1|AVM68239.1|549870_550473_-|DUF3793-domain-containing-protein	unknown	unknown	gnl|CDD|378911
CP027241.1|AVM68234.1|546158_546812_+|fructose-6-phosphate-aldolase	unknown	unknown	gnl|CDD|234947
CP027241.1|AVM68229.1|539536_540844_-|DUF2318-domain-containing-protein	unknown	unknown	gnl|CDD|226828
CP027241.1|AVM68223.1|534264_534804_-|pilus-assembly-protein-PilX	unknown	unknown	unknown
CP027241.1|AVM68232.1|543485_544415_-|hypothetical-protein	unknown	unknown	gnl|CDD|227604
CP027241.1|AVM68224.1|534800_535307_-|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM68242.1|551686_552157_-|hypothetical-protein	unknown	unknown	gnl|CDD|377306
CP027241.1|AVM68225.1|535526_535973_-|FMN-binding-domain-containing-protein	unknown	unknown	gnl|CDD|227275
CP027241.1|AVM68236.1|547760_548843_+|threonine-phosphate-decarboxylase	unknown	unknown	gnl|CDD|273466
CP027241.1|AVM68241.1|551046_551244_-|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM68226.1|536244_536922_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213222

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP027241.1|AVM68238.1|549410_549845_+|GNAT-family-N-acetyltransferase	gnl|CDD|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	6.72801e-14
CP027241.1|AVM68230.1|541206_541896_-|hypothetical-protein	gnl|CDD|378461	pfam10634, Iron_transport, Fe2+ transport protein. This is a bacterial family of periplasmic proteins that are thought to function in high-affinity Fe2+ transport.	5.27727e-49
CP027241.1|AVM68231.1|542055_543495_-|iron-permease	gnl|CDD|223744	COG0672, FTR1, High-affinity Fe2+/Pb2+ permease [Inorganic ion transport and metabolism].	6.47336e-43
CP027241.1|AVM68228.1|538234_539527_-|ABC-transporter-permease	gnl|CDD|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	4.0705e-23
CP027241.1|AVM68227.1|537023_538181_-|ABC-transporter-permease	gnl|CDD|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	7.20019e-21
CP027241.1|AVM68240.1|550685_551102_-|flavodoxin	gnl|CDD|235508	PRK05568, PRK05568, flavodoxin; Provisional.	1.29103e-67
CP027241.1|AVM68239.1|549870_550473_-|DUF3793-domain-containing-protein	gnl|CDD|378911	pfam12672, DUF3793, Protein of unknown function (DUF3793). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 187 and 211 amino acids in length. There are two conserved sequence motifs: PHE and LGYP.	2.78823e-48
CP027241.1|AVM68234.1|546158_546812_+|fructose-6-phosphate-aldolase	gnl|CDD|234947	PRK01362, PRK01362, fructose-6-phosphate aldolase.	1.01424e-141
CP027241.1|AVM68229.1|539536_540844_-|DUF2318-domain-containing-protein	gnl|CDD|226828	COG4393, COG4393, Predicted membrane protein [Function unknown].	3.88754e-53
CP027241.1|AVM68232.1|543485_544415_-|hypothetical-protein	gnl|CDD|227604	COG5279, CYK3, Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain [Cell division and chromosome partitioning].	4.37682e-13
CP027241.1|AVM68237.1|548865_549375_+|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.74588e-09
CP027241.1|AVM68242.1|551686_552157_-|hypothetical-protein	gnl|CDD|377306	pfam04326, AlbA_2, Putative DNA-binding domain. This family belongs to the AlbA clan of DNA-binding domains.	6.17631e-09
CP027241.1|AVM68225.1|535526_535973_-|FMN-binding-domain-containing-protein	gnl|CDD|227275	COG4939, COG4939, Major membrane immunogen, membrane-anchored lipoprotein [Function unknown].	2.94255e-12
CP027241.1|AVM68236.1|547760_548843_+|threonine-phosphate-decarboxylase	gnl|CDD|273466	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see pfamAM:pfam00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin].	2.71666e-89
CP027241.1|AVM68226.1|536244_536922_-|ABC-transporter-ATP-binding-protein	gnl|CDD|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	1.39482e-108

Protein sequences

>CP027241.1|AVM68232.1|543485_544415_-|hypothetical-protein
MRRVIGQKRLLIVGGIAAFLILSAALALPGKSKGSGGEGPPVVIANESEVITEIRRALRLHSQRIVISFEQERDVLAEMTAMVDAWVEAALQETERPDEGDYIRYQYGGYEQKCSRRASDGGYFYTVEIIPKYYLYLFQEEEVAGKLAEIWAEMARDGEMPDYDKVKAAYDYVCRHVKYDRVHRKNPYYFMRSTAYAALVQENATCQGYCVALYRLLRQAGINVRIVTGSVTGKNAEQLHAWNIVELDGKYYHLDATWDAQQEHYSYFLKGAAGFSDHILNEAFAADEFAGQYKIAEQDYAPAAEQRCH
>CP027241.1|AVM68231.1|542055_543495_-|iron-permease
MSLRGSKMKKKQKLQRLRNLFSAVLVLSLLFMLPGAVLAEEAKYYKTWEEYSTANGLEARNWHEVADAIDVLIGRVEELYEAGNQKEAYEYAKATYWGYYETTGFERNVMTYISGSRVSAVELQFVAFRKAVKKDGASLEAVKAEGQKLSDMLHEDADVLQPDGRPGDQKAAENAENTEAPSSENQSQTPKNPAGGAVAAFIGSLAIILREGLEAILIVGAIIAYLIKSGNKRGVAPVYFGAAFAVVCSFIMAYFIDYLKKINPENAMSQEIIEGAAALLAVAVLFYVSNWMVSKSESALWSQYIESKVAGSLERGSAIALGFTAWLAVFREGAEVILFYQPLMQESNANMVWLGFLSGCAILVVVFLLIRFLSIRLPLKPFFLATSILMAVMAICFLGAGIKEFIEGGVIEAAYQNWFTVTEVLDILGIYPLYETLIPQFILLVITVVTFGLQVRKNKKMRLELEAKAGSAAASAKVE
>CP027241.1|AVM68230.1|541206_541896_-|hypothetical-protein
MFFWKEILKMKKYGAMLLALAMVLALAGCGKTTEQPKEPEKGQQTEQTKEDTKENTAKVETDQAATGNEAGFTEYPIFEDEEVGFMSVSAVYFQPVPMSNGNENIEGFNIHLECDIKALENKLGYGLGDWVPYLTVDYKVVGDNGKGDVAAEGTFMVMSASDGPHYGANIKLDKADTYAVTFTFHNPEENGYLLHTDAETGPGGSFDDYFKDGNLQITHEGWEYTPQEW
>CP027241.1|AVM68229.1|539536_540844_-|DUF2318-domain-containing-protein
MTNRGCNQKTGVGNMLKYLILVTENTALPAILLGLLYAYIFAEFKQKGRRIVTLGAGAGLLAAIIRAILKNTTKVIDNTGGAGMWNVRIFAVSTVALLLYYIFGSRKIRQKMGIAGEWLTPVLASVWTFCLVFYALPEVLAYPFNFNLNGESVLSTAFFYRLIGYFLGLVLSLIAALAAGHTVKRLEFRLMARLLNIALFINGFQQIGKAVQVLHAKRLIKGRVFFLLARYTANLSDWFLYAVMAVAFVVPLLLWLRSFSVQEPYTNPAEHRKIRAKWLNIRRWSTTLTLCFALVILTLTFFRMWDNKVVALSPIEECEQRDNNMYISLTQVEDGRLHRFAYTTENGVAIRFIVIKKPNSSAYGIGLDACDICGETGYYERNGQVVCNLCDVVMNINTIGFKGGCNPIVIDYSISDGYIIVPIETLIKHEKTFKK
>CP027241.1|AVM68228.1|538234_539527_-|ABC-transporter-permease
MFFRMIKGAFGRQWKKMLMIAMTIALGASLATAMLNVMMDVGDKVNQELKTYGANIMVVPKSASVVSNLYEIEGGSAKGAYLLESELGNIKTIFWAFNIVDFTPFLDTAVTLESGEQATIVGTWFNHHLELPTGETLNTGLRNLRTWWDLREGEWLDEQSAAQTEKAVMVGETLAKRENIHSGDIIRLSTPFGQEEVTVRGIFNSGDSAEEQIFAPMAMVQTLADKKGYLTSIEVSALTTPDNELAVKAAKDPSSLTIKQYELWYCTAYVSSICYQIQDVITDSVASPVRQVADSEGAILEKIQLLMVLITILSLAGSALGITNLVTASVMERSSEIGLLKAIGAKDGAISALFLTEIAVTGVIGAAVGYLIGFGFAQIIGQTVFGSPIEMKLFVIPLIGVLVLTVILAGSIPAIRMLLRLRPAEVLHGR
>CP027241.1|AVM68227.1|537023_538181_-|ABC-transporter-permease
MTKQKMFLKMITASLVRRRSRMLVALLAIAVGATILSGLVTIYYDVPRQMGAQFRNYGANMIFMAAENTDEFSMAAVEKGISYIEGKELLGVTPYRYETLKIHEQPVVAAGTDLAGARITSPYWHVEGAWPEKPAEVLAGKEAANLLGLKIGDSFEVAAFANEDKKEKKAAPGSEVRLTVAGILETGGSEEEYIYMAMADLKAITGGGERLDIAELSISATRDKLESYKEKIAAEVSAITPQLVKRVTQSESAVLTKLQALVFIVTVVVLALTMICVATTMTAVVTERRKEIGLRKALGAADSDIIWGFMGEGLLLGGIGGLLGSFFGFGFAQFVSMNVFSSSITFQPLLLPVTMAVSVVITGLACLLPVRNAIDVDPALVLKGE
>CP027241.1|AVM68226.1|536244_536922_-|ABC-transporter-ATP-binding-protein
MSLLQLKNISKIYGSLKALDDVSLTVNKGEWTAIMGPSGSGKSTLMNIIGCMDKPSLGEVFIDGIDISKESAKGLTAIRRDKIGLIFQQFHLINYLTAVENVMVAQYYHSLPDEKEALEALERVGLADRAKHLPSQLSGGEQQRVCIARALINHAELILADEPTGNLDEANENIVLDIFRQLHSQGSTLIVVTHDLEVAESAQRTITLDYGKIKSDVQNENFGKY
>CP027241.1|AVM68225.1|535526_535973_-|FMN-binding-domain-containing-protein
MSKKKYTALFCAAVLAAGLTACGGSAAKYKDGTYEGKSQVYEGDEDGNGDGYGVATVTIKDNQVTDCQYLTYQTDGTLKDEDYGKKNGEIANADFYNKAQKAVLACAKYAAGYAETGDLSKVDAISGATISYNEFQEAVEDALNQAKE
>CP027241.1|AVM68224.1|534800_535307_-|hypothetical-protein
MKAVRHIAVIITALFLILGLPAAMYVDIPALFQAEEKVDAVASASLPLPEQPSGEFVVLLNRQKHMDTISQWQLFFSDGDAGVIMSDVDCRVAAADAAAMQLARRYQLRLPENQMQLKPENGLLLISKAEVGLFDAIVMSKEMADHYQVSTLSEQPDILFFSVKGEPR
>CP027241.1|AVM68223.1|534264_534804_-|pilus-assembly-protein-PilX
MRKWNAVLTLLIFILFLLHAVFGSLQMLGVGNTALKGLSWAAVGLITVHTLIGLKLTLETLKVQRQTGVFYWRENKLFWARRISGLAVMLLLFCHLTAFSYTRDGAYRLHWFTAGRLTVQLFLLAAVGVHIITNVKPLLIAFGVKGLRSWLIDMLVILSVLLLFMAAAFVVYYLRWNVF
>CP027241.1|AVM68233.1|544966_545962_+|hypothetical-protein
MMKKKFYLPLLCLLLILAAALPAEAAVNAVPSSVKVKVDQKKVAVRAYNIDGANYFKLRDVAMALKNSTKSFNVSWNNTTKSIALTKGQKYRPVGGELSPDLPAITSIAPSEAGLILDEVPVELTAYTINGNNYFKLRDLCALLEIGVTYSAEENQIQLRTDMDYIRSAFLELADKDPNEYQFVQVHNSKYLYSVELPAILAGLPLNHAGDGLTVYDDSDKDHTSYSNLSVFAGYNVLDQTLEEAAQGLLSYIPNIDKELLSITPISVKGAQAAYKLNYVGEYYIQAVIAKKNDAFYYLTYHCGNFNLIDSRFLPVLSDLYSRMEESLTIY
>CP027241.1|AVM68234.1|546158_546812_+|fructose-6-phosphate-aldolase
MKFFLDTANVEDIRKAAAMGVICGVTTNPSLIAREGRDFKEVLQEISSIVDGPISGEVKATTTEAEAMIEEAREIAQLHPNMVVKIPMTVEGLKAVKVLAKEKIKTNVTLIFSANQALLAARAGANYVSPFLGRLDDISTDGVELVRTIAEIFAIYDLPTEIIAASVRHPMHVTQCALAGADIATVPYAVIEAMTKHPLTDAGIEKFKQDYLKVFGK
>CP027241.1|AVM68235.1|547042_547522_+|hypothetical-protein
MPQWLLILLIVLAVTAVVLFVLYYFGNKMQKKANDSQEMIEQSKVVTSALIIDKKKLKAQDSSLPQMVQEQIPFYLRWRKLPMVKAKIGPKIATLLCDESVYQQLPIKKMVKIELAGLYIVSIKSGKLETPAKPGWRQRLALWVKNAQAKTNAQSSAKK
>CP027241.1|AVM68236.1|547760_548843_+|threonine-phosphate-decarboxylase
MMSNFHGSDVEKIAGLYQVQPQDLINFGVNANPLGLPAKAKQALAEQIELFSRYPDPEYAQLKNALSRYLAVDFARILPASGTSELIHQVIRHFAPKKALLYTPTYSEYASDVRRQGGQVLELPLVKDNHFQFPAAEFHRLLESADFVLLCNPNNPTATLLSAEELAPLIGRAQEKQIPFIIDETYIEFTEQPQKYSAISLIRQFSNLIILRGFSKFFAAPGLRLGYAVFGNPDWLQSLQSGYPWGVHALAAYAGEVFLEDQDYIQTSHRFVQAEKKRISTFLEALPNLTVYPATANFFLLELQRQNATDLFLYLLHRGLLIRNFHDEIGPGFFRFCILDQASNTRLLEAIADFVKGAES
>CP027241.1|AVM68237.1|548865_549375_+|GNAT-family-N-acetyltransferase
MEFRLAVPEDLPNIKEVYQAIVKRMIENKIKIWDDVYPCDFFEEDINKNRLYILLDKEIIAAAFVLTNEHSGYKNVEWQDNTATAVYLDRLGVNVLYGRKGIASMMIAKAIEVGRKSGAQYLRLFVIDENKPAINLYEKNKLIKAKGIYTEIIDDELSFNEYGYEIRLN
>CP027241.1|AVM68238.1|549410_549845_+|GNAT-family-N-acetyltransferase
MIRNMQLSDAACLQRICGQALGYNADIALVEHQIRKLSNDPHHIMAVYEEEGTQNAIGFVHAELYESIYSDTGLNILALAVDPAFQGKGIGQKLMAFIEAYAAQNHLAFIRLNSGAHRTDAHKFYEKIGYVCDKTQKRFIKSFR
>CP027241.1|AVM68239.1|549870_550473_-|DUF3793-domain-containing-protein
MRAKVGIPAQEILKQYSDMEYLCYTIAFHAAPTIMRQKAASLIIFKNGSRPLKQVWLGNRERCEQYFPLRSFCLYERPESVGVLFYQPDLLADCLLKPETKQFLAHFGYAPEMSLNEKLTALAARYQTGCPHEIGVFLDYPLHDVKAFADCRKDCLLTGYWKVYAEEKAALKRFREFDYSKNRILQALLRGVSPQRVAYV
>CP027241.1|AVM68240.1|550685_551102_-|flavodoxin
MAIPVIYWSGTGNTEAMAKAVAEGIKANGKEAKLLAVGDASAADVEAAEAVALGCPAMGDEILEEDEMEPFVESIADAVKGKKVVLFGSYDWGDGQWMRDWQERMKGYGADVVKEGLIANLEPDDDALAACKELGKAL
>CP027241.1|AVM68241.1|551046_551244_-|hypothetical-protein
MTLGLSVGRKGGSFGLSVYVLKSAAAGKGKCRDIEIFYQKGLKGAEYYGNTCYLLERNRQYGSNG
>CP027241.1|AVM68242.1|551686_552157_-|hypothetical-protein
MTELIYDKTSPDAEYYELLISLMERWEYEIVEFKEAKGQYSEDKIGQYFSAISNEANLKNQQYGWFILGVSEQKQKYPVGTSFKQGASVLIEKFKYEIGRETTDGMTFLDVIELNPVYEGKPRRVLMFKIPAAVAGMPTEWKTRYYARSGESLGSS

Crispr_ID: CP027241_4

• CRISPR_ID: CP027241_4
• CRISPR_location: 672276-672642
• CRISPR_type: TypeII
• Repeat_type: NA
• Spacer_info: 5 spacers
• Cas_protein_info: csn2,cas2,cas1,cas9

Consensus repeat of CP027241_4

Consensus_repeat	Method
GTTTNANATCATTCTAAATTAACAAAGCTCTCAAACTA	CRT
GTTTTACATCATTCTAAATTAACAAAGCTCTCAAAC	PILER-CR
ATCATTCTAAATTAACAAAGCTCTCAAACT	CRISPRCasFinder

spacers of CP027241_4

>4.1|672314|28|CP027241|CRT
GTTTCTGTGAGAGTTATAATATCTCTTA
>4.2|672380|27|CP027241|CRT
AGACACACGCATGCGACCGATCTTGTG
>4.3|672445|28|CP027241|CRT
ATCCGTCATATATGCGCCATGCTTGCGA
>4.4|672511|28|CP027241|CRT
TACCATCAATCTCGCTATCTTGGATGAT
>4.5|672577|28|CP027241|CRT
CTTTATGGACGATATCAAAGTGCGAAAA
>4.6|672378|29|CP027241|PILER-CR
TAAGACACACGCATGCGACCGATCTTGTG
>4.7|672443|30|CP027241|PILER-CR
TTATCCGTCATATATGCGCCATGCTTGCGA
>4.8|672509|30|CP027241|PILER-CR
TATACCATCAATCTCGCTATCTTGGATGAT
>4.9|672379|35|CP027241|CRISPRCasFinder
AAGACACACGCATGCGACCGATCTTGTGGTTTGAC
>4.10|672444|36|CP027241|CRISPRCasFinder
TATCCGTCATATATGCGCCATGCTTGCGAGTTTTAC
>4.11|672510|36|CP027241|CRISPRCasFinder
ATACCATCAATCTCGCTATCTTGGATGATGTTTTAC
>4.12|672576|36|CP027241|CRISPRCasFinder
ACTTTATGGACGATATCAAAGTGCGAAAAGTTTTAC

CRISPR arrays and Neighbor proteins around CP027241_4

CRISPR arrays

The CRISPR arrays of CP027241_4

>merge|CP027241|4|672276-672642|CRT,PILER-CR,CRISPRCasFinder
CGCTATATGATATTTGCATTCCCAAAGCTCTCGAACTAGTTTCTGTGAGAGTTATAATATCTCTTAGTTTTATATCATTCTAAATTAACAAAGCTCTCAAACTAAGACACACGCATGCGACCGATCTTGTGGTTTGACATCATTCTAAATTAACAAAGCTCTCAAACTTATCCGTCATATATGCGCCATGCTTGCGAGTTTTACATCATTCTAAATTAACAAAGCTCTCAAACTATACCATCAATCTCGCTATCTTGGATGATGTTTTACATCATTCTAAATTAACAAAGCTCTCAAACCACTTTATGGACGATATCAAAGTGCGAAAAGTTTTACATCATTCTAAATTAACAAAGCCTCAAACCTA

>CP027241|4|2|672276-672642|CRT
CGCTATATGATATTTGCATTCCCAAAGCTCTCGAACTA	GTTTCTGTGAGAGTTATAATATCTCTTA
GTTTTATATCATTCTAAATTAACAAAGCTCTCAAACTA	AGACACACGCATGCGACCGATCTTGTG
GTTTGACATCATTCTAAATTAACAAAGCTCTCAAACTT	ATCCGTCATATATGCGCCATGCTTGCGA
GTTTTACATCATTCTAAATTAACAAAGCTCTCAAACTA	TACCATCAATCTCGCTATCTTGGATGAT
GTTTTACATCATTCTAAATTAACAAAGCTCTCAAACCA	CTTTATGGACGATATCAAAGTGCGAAAA
GTTTTACATCATTCTAAATTAACAAAGCCTCAAACCTA

>CP027241|4|1|672342-672574|PILER-CR
GTTTTATATCATTCTAAATTAACAAAGCTCTCAAAC	TAAGACACACGCATGCGACCGATCTTGTG
GTTTGACATCATTCTAAATTAACAAAGCTCTCAAAC	TTATCCGTCATATATGCGCCATGCTTGCGA
GTTTTACATCATTCTAAATTAACAAAGCTCTCAAAC	TATACCATCAATCTCGCTATCTTGGATGAT
GTTTTACATCATTCTAAATTAACAAAGCTCTCAAAC

>CP027241|4|3|672349-672641|CRISPRCasFinder
ATCATTCTAAATTAACAAAGCTCTCAAACT	AAGACACACGCATGCGACCGATCTTGTGGTTTGAC
ATCATTCTAAATTAACAAAGCTCTCAAACT	TATCCGTCATATATGCGCCATGCTTGCGAGTTTTAC
ATCATTCTAAATTAACAAAGCTCTCAAACT	ATACCATCAATCTCGCTATCTTGGATGATGTTTTAC
ATCATTCTAAATTAACAAAGCTCTCAAACC	ACTTTATGGACGATATCAAAGTGCGAAAAGTTTTAC
ATCATTCTAAATTAACAAAGCCTCAAACCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP027241.1|AVM68346.1|682931_683900_-|mannose-6-phosphate-isomerase	unknown	unknown	gnl|CDD|224399
CP027241.1|AVM68340.1|673176_674049_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|274694
CP027241.1|AVM68343.1|679823_680129_+|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM68331.1|659053_659758_-|SrtB-family-sortase	unknown	unknown	gnl|CDD|320675
CP027241.1|AVM70421.1|672896_673172_-|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl|CDD|226043
CP027241.1|AVM68332.1|660891_661992_-|FAD:protein-FMN-transferase	unknown	unknown	gnl|CDD|224394
CP027241.1|AVM70420.1|660141_660315_-|arginase	unknown	unknown	unknown
CP027241.1|AVM68341.1|674058_678153_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|374653
CP027241.1|AVM68347.1|683922_684636_-|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl|CDD|176506
CP027241.1|AVM68345.1|681058_682921_-|hypothetical-protein	unknown	unknown	gnl|CDD|378358
CP027241.1|AVM68342.1|678430_679483_-|acyl-CoA-thioesterase	unknown	unknown	gnl|CDD|370148
CP027241.1|AVM68338.1|668958_671916_+|hypothetical-protein	unknown	unknown	gnl|CDD|238923
CP027241.1|AVM68334.1|662446_663073_-|hypothetical-protein	unknown	unknown	gnl|CDD|225107
CP027241.1|AVM68333.1|661970_662321_-|ArsC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|239334
CP027241.1|AVM68336.1|664616_667058_-|hypothetical-protein	unknown	unknown	gnl|CDD|379902
CP027241.1|AVM68344.1|680179_680821_+|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM68339.1|672690_672900_-|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09644_csn2_CAS-II-A	gnl|CDD|213407
CP027241.1|AVM68335.1|663189_664620_-|hypothetical-protein	unknown	unknown	gnl|CDD|226951
CP027241.1|AVM68330.1|657256_659020_-|transglycosylase	unknown	unknown	gnl|CDD|381612
CP027241.1|AVM68337.1|667362_668829_+|hypothetical-protein	unknown	unknown	gnl|CDD|270451

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
CP027241.1|AVM68339.1|672690_672900_-|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09644_csn2_CAS-II-A	1.6e-15	51.9	3.4
CP027241.1|AVM68340.1|673176_674049_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	8.2e-93	305.2	4.8
CP027241.1|AVM68341.1|674058_678153_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	5.1e-243	804.5	45.2
CP027241.1|AVM70421.1|672896_673172_-|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	2.9e-34	112.1	0.7

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP027241.1|AVM68346.1|682931_683900_-|mannose-6-phosphate-isomerase	gnl|CDD|224399	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism].	4.896e-68
CP027241.1|AVM68340.1|673176_674049_-|type-II-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	9.38068e-107
CP027241.1|AVM68331.1|659053_659758_-|SrtB-family-sortase	gnl|CDD|320675	cd05826, Sortase_B, Sortase domain found in class B sortases. Class B sortases are membrane-bound cysteine transpeptidases broadly distributed in Gram-positive bacteria (mainly present in Firmicutes and Actinobacteria). They can have radically distinct functions. Some members of this group attach haemoproteins to the peptidoglycan of the cell wall, while others assemble pili, which are multi-subunit hair-like fibres that extend from the cell surface to promote microbial adhesion and biofilm formation. In transpeptidation reaction, the surface protein substrate is cleaved at a conserved cell wall-sorting signal (Class B sortases normally recognize the consensus NP[Q/K][T/S][N/G/S][D/A] motif), and covalently linked to peptidoglycan for display on the bacterial surface. The prototypical sortase B protein from Staphylococcus aureus (named Sa-SrtB) cleaves surface protein precursors between threonine and asparagine at a conserved NPQTN motif with subsequent covalent linkage to pentaglycine cross-bridges. It is required for anchoring the heme-iron binding surface protein IsdC to the cell wall envelope. SrtB contains an N-terminal hydrophobic region that functions as a signal peptide/transmembrane domain. At the C terminus, it contains an essential cysteine residue within the catalytic TLXTC signature sequence, where X is usually a serine. Genes encoding SrtB and its targets are generally clustered in the same locus. The prototypical class B sortase involved in pilus biogenesis is pilus-specific sortase C2 from Streptococcus pyogenes (named Sp-SrtC2) that anchors a surface protein containing a QVPTGV motif to the cell wall, as well as polymerizes the major pilin subunit Tee3/FctA and attaches the minor tip pilin Cpa. The linkage of Cpa to Tee3 by SrtC2 requires the VPPTG motif in the cell wall-sorting signal of Cpa. The family also includes SrtB enzymes from Bacillus anthracis (named Ba-SrtB) and Clostridium difficile (named Cd-SrtB). Ba-SrtB is thought to recognize the NPKTG motif, and attaches surface proteins to meso-diaminopimelic acid (mDAP) cross-bridges. Cd-SrtB does not play an essential role in pathogenesis. It cleaves short [SP]PXTG motif-containing peptides between the threonine and glycine residues and then covalently anchors the threonine residue to a nucleophile such as glycine or mDAP, but not to the peptidoglycan of C. difficile, suggesting a novel association of sortase activity with cyclic diGMP (c-diGMP)-mediated regulation to control levels of cell wall anchoring and secretion of putative adhesion molecules.	2.20035e-74
CP027241.1|AVM70421.1|672896_673172_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	4.94781e-26
CP027241.1|AVM68332.1|660891_661992_-|FAD:protein-FMN-transferase	gnl|CDD|224394	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism].	1.50392e-81
CP027241.1|AVM68341.1|674058_678153_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl|CDD|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	1.53886e-142
CP027241.1|AVM68347.1|683922_684636_-|glycerophosphodiester-phosphodiesterase	gnl|CDD|176506	cd08563, GDPD_TtGDE_like, Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.	7.77906e-86
CP027241.1|AVM68345.1|681058_682921_-|hypothetical-protein	gnl|CDD|378358	pfam10022, DUF2264, Uncharacterized protein conserved in bacteria (DUF2264). Members of this family of hypothetical bacterial proteins have no known function.	4.30131e-140
CP027241.1|AVM68342.1|678430_679483_-|acyl-CoA-thioesterase	gnl|CDD|370148	pfam08840, BAAT_C, BAAT / Acyl-CoA thioester hydrolase C terminal. This catalytic domain is found at the C terminal of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases (BAAT).	1.38667e-31
CP027241.1|AVM68338.1|668958_671916_+|hypothetical-protein	gnl|CDD|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.55011e-56
CP027241.1|AVM68334.1|662446_663073_-|hypothetical-protein	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.55238e-47
CP027241.1|AVM68333.1|661970_662321_-|ArsC-family-transcriptional-regulator	gnl|CDD|239334	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.	2.35748e-58
CP027241.1|AVM68336.1|664616_667058_-|hypothetical-protein	gnl|CDD|379902	pfam16927, HisKA_7TM, N-terminal 7TM region of histidine kinase. HisKA_7TM is an N-terminal region consisting of seven transmembrane domains found in Archaea and some bacteria. It is always found associated with histidine kinase.	1.63236e-06
CP027241.1|AVM68339.1|672690_672900_-|type-II-A-CRISPR-associated-protein-Csn2	gnl|CDD|213407	cd09644, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.27576e-09
CP027241.1|AVM68335.1|663189_664620_-|hypothetical-protein	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	7.35284e-16
CP027241.1|AVM68330.1|657256_659020_-|transglycosylase	gnl|CDD|381612	cd16891, CwlT-like, CwlT-like N-terminal lysozyme domain and similar domains. CwlT is a bifunctional cell wall hydrolase containing an N-terminal lysozyme domain and a C-terminal NlpC/P60 endopeptidase domain (gamma-d-D-glutamyl-L-diamino acid endopeptidase), and has been implicated in the spread of transposons. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).	5.00463e-52
CP027241.1|AVM68337.1|667362_668829_+|hypothetical-protein	gnl|CDD|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.16472e-30

Protein sequences

>CP027241.1|AVM68338.1|668958_671916_+|hypothetical-protein
MKRSISLRTQIILLMTFLVILQNISLVMSLSFSNAFFLLDSESFRLFNNTTTARKQALNNELGQVVRLVADDTRLFTQVLQKVSANTNKNRLSELDVYNKIATTGAEYLIHLLQSSNINGAFFMLASDDKQPMPSVYIRSAAPKDSYALPENFLLELGPVSVSQKYLIPTSSHHSLSAPFDFNSSDSEKWDFYYQPTKAALDFPKAEIERYGYWTTPSSLLSHLPTSVFYTLPLLNSSGYPIGVIGIEITQNYFSQHYLPLIDLPYQDSFYAITPMNDQILTLDWFISSSPLAQIALKKQKNLHLTSAKISDNIYVSYLDEIGNVYCFVQPLTLYSQNSPFIQDSWNLVSFVPKDTLHGTSSQVRRTVLISIGLTTLAAFIVIFFMARFSTRKIFGMSKYLTELDPYQAIQLKRTGMREFDELAEAVEKLNQSVIHASETTSRILKLSLLPIGGFELTVESDQVLITDYIYSLLQLNPETKLSIEEWKKHYALLTASPAPDYDNIYHFSVRNKSDGIWLRILESKTPTGSVGVILDVTRDIEEHRRLVHELDFDAMTHLYNRQAFKREAIAKILYEPNKIGAMIFCDLDNLKYINDNFGHEIGDRLILRASEMFHEFGTYGGIVSRISGDEFAIYLHGFSSKSEIRKLINRQFKRNERYELRTPDGSSHRIRFSSGIAWYPEDSDDVGDLLKLADFAMYEAKHKEKGVLYEFNKKSYESKSYLLENREAIHRLIDERLIHFNFQPIVDLRTGSIYAYEALMRSSSDAFKNPLEILSVAAAQSQLAQLERLVYSVVLETLDRHADELNGLHIFINSIPSHLISPEEIMTLEETYGYLFPQLVIEVTERESGSLEEQLSDKFSFLRDYGMKLALDDFGSGYSNESRILTIRPNIVKIDMMLIQGIHEDPDKQQLIANLVSFCHARNILLIAEGVEEEDDLAKLIELNVDLVQGFYVAKPTPGFDPIPTAIRDQIQELHARYHSGNNA
>CP027241.1|AVM68337.1|667362_668829_+|hypothetical-protein
MKPRRFLVFVLIFSLFLAACSPAQKDHAIQSVKVLEPIQLTLWHYYVGQNQQTLEDAIVEFNQTLGTEENIIIESVSHGSVAELEASLSNSAKGVINSAPMPDIFSCYPDKALEIDALGMIADLNPYFTDEEKAGYVSSFLADGYFDNRLLILPIAKSTELLYINATAWNEFADATGLSHTALETWESIWTTAQKYYDWTDRQTPDTPNDGRIMLGMDSVQNYILAGCKQSGVDMVDAETKNIILNLPVLRKLFDLYISATAMHYFGGSGKFRSDNIKSGELISYIGSTSSASYFPTWIQKDTTRQNIQFLALPYPLWQGGEPTVMQQGAGMCITKSTAEKERAAALFLKWFTGKEQNMAFAMNSGYLPVKADIYRGEDFKDALQKLDQGNESQKNVAMVYDIAFQQVSGYTAYAVRPFKNSYMLRPLLLSTLTSAAESAQQAADTLKKQKMSSAQILSSLNLEQRFADWIESLEKALQNEGISYQKI
>CP027241.1|AVM68336.1|664616_667058_-|hypothetical-protein
MRKEKLIKIGAVAAGLLMLVLWALTGGREMGLDAGLLPGQPEILFFEETPSPVLVAAKKAFPGYKIRRRPERHLSHFLEGGEIVLAYDVQALPLIRAGAEFYFYPLYNDAVILVTNQGQLAEPVRSWRDVAVGRTAVSLPERSPEQAYIWRAIAYGLTGSFDRLAAQSYLSGIYESDRLFWDNIIAPVQITLYSNYLYTLQRREMKPVFPEEGTLVFQVGLFSRHPLEAGEVAAIRQIYKDLNYLSPEKNFQTENVAALFAASRLEEFYDFGEINVPLERGVRKNHRYAPITGWEHQTAAAVIIILTIFWINRVNRTVIHMGVRRGLVLNGLLVIGWISVGIFKYSFYGGADYIRALWYSYYLFILALPPAGIFIALNLDQYDKTVFPLRLLAICAVSGLLLLLVLTNDLHQQFFRFLSSDRSLWYKRYKHNWGYYSAALWVLLTQAGMWLYLARKSWDAPNRKMAVLPVLVLILGVAYSACYNLKIPFFREISLALGMGSIILLFWTALLKSGLIPSNRGYHELFEHSLLDMRILDRAGQLQFRSAGAETSEEPPVFPPERDWSESQEPAFVAAADSLLWSTAIRGGRIVTRENIRELSSLKQNLERVTRELEEENLILSKKEQVESRLIFVREQNELTEEVNRLVEDKINKMTVLLQEMKACPPLGEKGLIQLQRLAIYCKRRCELLIKSKQQGLCPPADLSRLIDEINLGTFSGYQFFCGLEAGIPFPAAAQVYELCHLFYEWALTEDITTMTIRLFQEKDELFLYFLIESDNSSQRQSLQTKLNMVPDVNYKELGDAFSVLLRVREGML
>CP027241.1|AVM68335.1|663189_664620_-|hypothetical-protein
MIGLYRYFDQNILLFFLFLSLMAVLMQAFYASSIVFRRLRKSFEFLILLYLAAVSVLLRHVNAELSASMLVLWEYEHWFSLLAFVISIWGIFVYVKTRRLMVPAGIGLVLLNMPASERVIGRFYGFYFVLSLALLILRAGISYYAERQRQETEITEYSVKEALDAQHSGILFAEKNGNIRLINRQMLALMRDLTGGNSRNAEKFWERLPGLTKDWYRPSAEEGAEQYLVETPRREVWQFVRKSFWLRGQETYQIIATDVTEQESITRQLKAYQAQLEAQKSRLQAALANLEELRQQEALSRMWNHVHDVLGQRISILQRELSNKKSVDYTLLQAQIDNLLTDLNFPEEEEPLQGYRDIINAFLPLGIRFHTQGQLPEDPVLAQKVVEIIREAVTNAVRHGGAENIYIQIEQTDKIRLTIENDGRPTTGEIRWGGGLRSIQRRVEESAGKLVIQTEPRFKLSVELAQAEEEAAEIRV
>CP027241.1|AVM68334.1|662446_663073_-|hypothetical-protein
MIKLLFVDDQAVTLRFLENCFGDADRYEIVGSLIQAEIADLWCERKKPDAIFLDIQTKEKATNGLEMAKRIKEKFPQIKILLMTGFDEISYIPRAREIGVDAFLLKSYPEERFVQILQEVVYEGRMVFPEENNQIPVEEGQTPLTEREIEVLRLICQDHSNKEIADSLYVTESTVKRHVESLLRKTGKSGRAGLVAYAIAGGWINPNI
>CP027241.1|AVM68333.1|661970_662321_-|ArsC-family-transcriptional-regulator
MQFICYSKCTTCQKAKKWLDEKNISYQERAIKTENPGYEELKDWLAVSGLPVKRFFNTSGLLYKEMNLKDRLPQMSEDEQLKLLASDGMLVKRPLLIGGDWVLVGFKETEWSEKLG
>CP027241.1|AVM68332.1|660891_661992_-|FAD:protein-FMN-transferase
MERKIRMRIREKTGCCFRPGRAALVLLAGLWLLTACAQPAKPEPQKYQEQFFDLFDTVTQISGYAASEQEFRENLAYIRARLEYYAKIYDIYQESAYIDTLWTVNQAAGQEPLLVEPAIFDLLKFGKEMYEQSGGAVNIAFGSVLRIWHEFRQAGMENPEQAKLPDMAKLRAAAAHTNIDDLILDEEAGTVFLRDPEMSIDVGALAKGYAVERVAKEMRAAGMTAFLLNVGGNVRAVGAKPNGEPWHIGIQNPDTSSPDSYIEEVWLKTESLVTSGNYQRFYEVQGKRYHHIIDEDTLLPADYFQSVSILCADSGKADAYSTAAFNMPPEESRRFIESLAGVEAMWVLSNGEIMYSSGFAEYLPKE
>CP027241.1|AVM70420.1|660141_660315_-|arginase
MTNRNHIRLWLRIRLHDKLKSNNYSELAMVNVADRWRERNVWYRGRSCQWWKQSKKP
>CP027241.1|AVM68331.1|659053_659758_-|SrtB-family-sortase
MYHIYDHYEQLDEQTEVFDEIAEVVAQAPDEEPVPADVPVSEGQDVLSKYKELYLQNEDMVGWISISGTSINYPVMQTKDEPNYYLKHNFEKQYSDLGTPYIQENCDLLTSDNLIIYGHHISGNRMFGALEDYKSKSFYEEHKTIQFDTLTEQAAYEIVAVFKTVAYSSSGYRYYDFVNAENEEEFDAYIETCKELALYDTGVTADYGDRLITLSTCEYSATNGRLVVVAKKAA
>CP027241.1|AVM68330.1|657256_659020_-|transglycosylase
MADIKTRDAVKGTIKTIDKAAVASERMKAAYAKTKEKAEEGYYANEGSATEYAADKIAHASDRVKDEGIHQFNKQGQKGVKTTKETVVKAKDKMADFKQKRAAKAAEQRSARNVSGQNGLQIHCGTAGRSPVSDTSVQTIKTSTDTKRTIKQSARSAGKTVKTAAKGSVKITERSVKTAQVTSKAAIKTTQQATKTAQAAAKASAKTAQKAAQAARVSAKASAAAAKTTVKATIAAVKAIIAGTKALIAAIVAGGWIAIVIILIVVLLGCAISLFGGGSESNSYTPVSAEVEAYDPLIQEYARQHGIPEYVELIKAVMMQESGGQGNDPMQASECGYNTQYPNTPNGITDPEYSINVGIQNLAACLNAAEVENPVDMDRIKLALQGYNFGNGYISWAQTNYGGYTYANAVEFSTIQAERLGWASYGDTQYVSHVLRYYPFGRAFTGGGNQVIVEVALTQLGNEGGQPYWSWYGFSSREEWCACFVSWCAEQCGYIEGGFIPKFAGCVSGANWFKERNQWQDRNYEPTAGDIIFFDWEGDGSTDHVGIVEKCENGVVYTVEGNSGDVVKQRQYTVGSSFIYGYGVPAY
>CP027241.1|AVM68339.1|672690_672900_-|type-II-A-CRISPR-associated-protein-Csn2
MSSICAIKLVWILNLKQFLTEKQVGQLYEFCFYEKIHLINLEGQKNYTLKQEKCVIIDKDLCVIDASLN
>CP027241.1|AVM70421.1|672896_673172_-|CRISPR-associated-endonuclease-Cas2
MRVIVFFDLPVLTESNRREYRTFRKFLIKSGFMMVQESVYCKLAQNSSVADIVVDNIKKNKPPEGLVQVLRVTEKQYNKMDFIVGEIIYVQ
>CP027241.1|AVM68340.1|673176_674049_-|type-II-CRISPR-associated-endonuclease-Cas1
MSWRTVVISSNAKLDYQMGYMVVRRMDTMKIHLSEMEILIVESTAVSLTAALLNELSKKKIKVIFCDEKRNPSSELVGYYGSHDTSTKIRTQITWKEEVKKAVWTEIVTEKIRKQAEHLEFWSLEEADMLYGYINELQFADASNREGHAAKVYFNALFGLDFTRTEENSMNAALNYGYSLLLSAFNRCITANGYLTQLGLFHDNMFNQFNLASDLMEPFRPIVDLKVKQMQPVKFEHDEKMELLTILQNEVKINGRTEFVNNAIKIYCKSVFDAINSEDVSEIKFYRYEL
>CP027241.1|AVM68341.1|674058_678153_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MEKQEYFLGLDMGTGSVGWAVTNTKYELLRKKGKDMWGIREFETAESAAERWKYRVNRRRRQRQVVRLGLLKSYFGDAINKIDPNFFIRMENSKYFLEDKDKKLNSKNGIFDDENYKDTDYYTEYPTIFHLRKALLDLENTGAKFDVRLVYLALANMFKHRGHFLLNAEGDALNTEQVDAVYQEVLDKFENDYEMIIEHKSVQQVIDIISNSDTGRKKKHEELQELFGVVKKDKSVNELLKCLCGLSINAKLIFDEKTEEKVPLCFHDFSYSDKIAELMEQLTEEEYAVIEQLKSIYDYAVLAGTLKGYDYLSCARVELYEKHCKDLKLLKMLFRKYKTKEEYDMMFRSNVDGTYSAYVNSLNSTDAIAESNKYRRNMKGRKADDIYSTIKKAFKDITDDEDIQYVMEKIEKEQFLPKQLTGANGVIPNQVHKKEMERILKNAENYLPFLKDKDESGLTVSERIIQLFTFQIPYYVGPLGGNSKTGWIVRKEEGAVLPWNINDKVDMSATSEAFIGNLIRTCTYIQGEKVMPKASLAYERYCVLNEINNLCIDGERLDTKLKQQIYKDCFMKGKRLTKKQLCSYLVAQSLISSEEQVTGIDKTINNSLSSYGKMYAIFGERLKEDAILATAEDIIYWGTVFGDSKKMLKQRLTKYVEQGILDENQLKRILGYKFKDWGRFSKALLTLSGCDKSTGEIMSLGRAMWEYSLNFMELINSDDFTFKEELAKQSTVAMKSLSDFTYEDLQDSYFSVPVKRMIWQTLLLIREIEQVMGYAPKRIFVEMTRTEEEKGDKGRKASRGSQLLELYKNIKNTENHNWKQELSEANESGKLRSKKLFLYYMQMGRDMYTGEEIDLGRLYDDNLYDIDHIYPRHYVKDDSIMNNLVLVNRQANQHIKKDLYPIPKQIKANPKVQELWNALHKQKLITDEKYTRLISNTPFTEKQLGDFIARQLVETGQGTKGVATLLEQLFTGTDIVYAKASNVSDFRRDNGFLKSRLVNDFHHAQDAYLNIVVGNVYHTKFTKNPWNFIRKDYEKDKEKNRYNLAKMFEWDVIRGCETAWIAKRKDEKGTIVNVRKMMQKNTPLLTRMNFEQHGGIANATLYSAKKAKPENYLPLKTSDTRMKDVTKYGGFTSATIAYYFIVHHKEGKKENVTIEGLPLYCKEKVEREANGLERYCEEVLGYGEVNILRRKLKIQSLLEINGYQFHLSGKTGDRLILRNAMSLYLPENWTTYIKKVEKAVTWHILEEEISAEQNCRLYDILADKHAHAVYAKRPNAFGQKLLDGKEKFVVLDPEQQCEALLRILHLTRIGTTETNLKLIGESDRSGIISISKHLKAADKPAVISQSVTGLYEKKEWIFTEKTDR
>CP027241.1|AVM68342.1|678430_679483_-|acyl-CoA-thioesterase
MKKLWKVLKGIFITIAVLIILLIVVRFINGQITKGKEKIRESTLEANSIYREINQEEPEKSNLPGINISVVKGNYLNGYHLRPEKITHQGTVITFGGSEGSSNINMAVNLAKEGYEVYSLYFFGRDNQQKELVKVPLDFFTEAYAEIEKNAVAAKPLTILGGSKGAEMCLLLAGKYPDLVDNVVLYAPSTYVFQGLSFDYSSSNSSWSFQGKELAYLPFTAASGSTYGKFMMRMFFNAPIEYEPIYRSVTENAENKEAALIDVSKAKANLLIFAGKEDKMWPSADMAEDIIKRYPAEKKLVTYEKAGHIFFGPPVLSNMSVGGEYEANEAAKIDSDRILLKALEEWTRKE
>CP027241.1|AVM68343.1|679823_680129_+|hypothetical-protein
MLIPLSALKAPIVNDIFGMGSELLSFAGIFASIGGIMGAVLLPYIAKILSPLRITILGTFLLIIGMTCIPVGRLVKGNAILYTVNGKEEDAKKSVALHEKP
>CP027241.1|AVM68344.1|680179_680821_+|hypothetical-protein
MNIAKLKIVIDPDGALAEFNKINYLGIAGTDIARLLHKKGETDEALERYTNALFYNLMRDLDLSLNISLAIASRGTKKDFREACDLIDRSIAYSDSASLEKNCYTSKLKVILLITKVLALSCLTEYESMKSTIDEAYALAKKYDDNPNNSFRNFIKFWHAKENFKPLASDDLGQSAVRSIDNFFATKPYTVQKELEENVFEAKKYWESIRKLL
>CP027241.1|AVM68345.1|681058_682921_-|hypothetical-protein
MKQETIRLQTRADAARLLLDMIRPLKDFYSPGKAFLNVSAAGVHYGRKIAGMEGFARILWGLGPLWHTANTDLPEDLRQEAAQWQELCITGIQNGTDPNHPEYWGDIHDFDQRMVEMAALAVAISLSPQKLYRDFSPQAQKNLYEWLNQINFKKVHGNNWRYFRILVNTTFRLLGLEWSEACVEDDLALIRSCYTGDGWYYDGNDGQIDYYVAFAIHFYSLIRAKLLQDSEPEFYQTTLEKGNQFCQDFIYWFANDGAELPFGRSLTYRFAHNSFFGALAFAGGEGAGYGVLKNLVLRNLESWLKRPIFDNAGVLSVGYHYPNLFMSENYNGGGSPYWALKSFIMLALPAEHPFWAAPAEEFSYQPQKKLSHARMLITHDENHHVQAFTVDQHCAMNHGACVEKYEKFVYSNQFGFSVSRGNNLAMGAFDSVLAVSRAEEEFYRVYAGRKQFSLTEEWIRSEYEILPGVTVITWLVPGGSWHVRIHRLKTAYPVKVADGGYAIENEDAAGEKYSLLCRQEENGGVFVSVPGGISGIVSLSGGNSRVIDAFPNTNLFYPLTVIPTVSYELPAGEHRLVDMVFADRSGQAAEKRQQRPVITDEGSGIRINFADNRQVWIDLA
>CP027241.1|AVM68346.1|682931_683900_-|mannose-6-phosphate-isomerase
MYPLKFEKVFKKKIWGGQKFATELDIALPDGDKYGESWELCSRASGVSRIMNGPLKGKTLEDVYQEYGSELVGEEVYSEFPDKFPLLVKYLDIEGLLSIRVHPDDKYAMRHEKDYGKSKSWYILDASPDAKVIMGLADGVGREEFLRRAADKDFEGLFRIIPVKKGDFIDIEPGTVYSSYEGTLLVCEIQQNSETKYRIYDYERDRNGNPKEIHLEKAAEIIRYGQKPLISSTDTRQTMEFEGAQIQELVRHRNYNVDHMLVEKEMLAEAYKNFKVLTVISGSAIMSAGKEKYEMKKGDTYFIPAKVRVGIEGSVELLKSYL
>CP027241.1|AVM68347.1|683922_684636_-|glycerophosphodiester-phosphodiesterase
MKEMICFAHRGLSEHAPENTMAAFQAAVKVGVKAIELDVQRTKDGQVVVMHDFYLGRTNNGQGLLKDYTYEELSRLDAGSWFSPEYTGEKMPLLEDVLRQLPADILLNIELKKLALEAGSDLAESVVGLLRRYPRPVLISSFDHYLLKEVQTIDDTLPLGLLYGSNLIDVFAYARQSGLKISAIHPSVECVSPELIKQAHQLDIKVNVYTVRRREEAAMLKAYQADGIFVNTFEVVS

Crispr_ID: CP027241_5

• CRISPR_ID: CP027241_5
• CRISPR_location: 718941-719074
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP027241_5

Consensus_repeat	Method
TTAAGCGCGCTGCCCGGACTAACTGCCGCTGTCAGCGAA	CRISPRCasFinder

spacers of CP027241_5

>5.1|718980|56|CP027241|CRISPRCasFinder
TACCTGAATATCATTCACAAGCAAGGTGTTTTAGCCGTGATGCAGGACTGCCTGCT

CRISPR arrays and Neighbor proteins around CP027241_5

CRISPR arrays

The CRISPR arrays of CP027241_5

>merge|CP027241|5|718941-719074|CRISPRCasFinder
TTAAGCGCGCTGCCCGGACTAACTGCCGCTGTCAGCGAATACCTGAATATCATTCACAAGCAAGGTGTTTTAGCCGTGATGCAGGACTGCCTGCTTTAAGCACGCTGCCCGGACTAACTGCCGCTGTCAGCGAA

>CP027241|5|4|718941-719074|CRISPRCasFinder
TTAAGCGCGCTGCCCGGACTAACTGCCGCTGTCAGCGAA	TACCTGAATATCATTCACAAGCAAGGTGTTTTAGCCGTGATGCAGGACTGCCTGCT
TTAAGCACGCTGCCCGGACTAACTGCCGCTGTCAGCGAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP027241.1|AVM68374.1|712240_713434_+|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl|CDD|238434
CP027241.1|AVM68373.1|711356_712217_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
CP027241.1|AVM68383.1|722414_723653_-|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM68375.1|714826_715972_+|hypothetical-protein	unknown	unknown	gnl|CDD|223745
CP027241.1|AVM68382.1|722082_722352_-|hypothetical-protein	unknown	unknown	gnl|CDD|379911
CP027241.1|AVM68386.1|726201_727113_-|hypothetical-protein	unknown	unknown	gnl|CDD|349778
CP027241.1|AVM68370.1|707377_708685_+|6-phospho-beta-glucosidase	unknown	unknown	gnl|CDD|133432
CP027241.1|AVM68381.1|721795_722029_-|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM70422.1|713478_714708_+|gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
CP027241.1|AVM68385.1|724826_726083_-|hypothetical-protein	unknown	unknown	gnl|CDD|227297
CP027241.1|AVM68378.1|719953_720691_-|tRNA-threonylcarbamoyladenosine-dehydratase	unknown	unknown	gnl|CDD|238384
CP027241.1|AVM68371.1|708987_710382_+|hypothetical-protein	unknown	unknown	gnl|CDD|270303
CP027241.1|AVM68379.1|720735_721014_-|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM68377.1|719336_719786_-|hypothetical-protein	unknown	unknown	gnl|CDD|377263
CP027241.1|AVM68369.1|706288_707308_+|ATPase	unknown	unknown	gnl|CDD|225518
CP027241.1|AVM68368.1|705138_706176_+|hypothetical-protein	unknown	unknown	gnl|CDD|224423
CP027241.1|AVM68384.1|723952_724903_-|hypothetical-protein	unknown	unknown	gnl|CDD|227300
CP027241.1|AVM68376.1|716020_717505_+|altronate-hydrolase	unknown	unknown	gnl|CDD|377287
CP027241.1|AVM68372.1|710460_711357_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
CP027241.1|AVM68380.1|721180_721777_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP027241.1|AVM68374.1|712240_713434_+|N-acetylglucosamine-6-phosphate-deacetylase	gnl|CDD|238434	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.	1.00038e-84
CP027241.1|AVM68373.1|711356_712217_+|sugar-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.26429e-77
CP027241.1|AVM68375.1|714826_715972_+|hypothetical-protein	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.07934e-35
CP027241.1|AVM68382.1|722082_722352_-|hypothetical-protein	gnl|CDD|379911	pfam16982, Flp1_like, Putative Flagellin, Flp1-like, domain.	3.01004e-09
CP027241.1|AVM68370.1|707377_708685_+|6-phospho-beta-glucosidase	gnl|CDD|133432	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
CP027241.1|AVM68386.1|726201_727113_-|hypothetical-protein	gnl|CDD|349778	cd17869, TadZ-like, pilus assembly protein TadZ. Pilus assembly protein TadZ is involved in the production of a variant of type IV pili. It is part of the SIMIBI superfamily which contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.	1.52492e-05
CP027241.1|AVM70422.1|713478_714708_+|gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	8.25862e-50
CP027241.1|AVM68385.1|724826_726083_-|hypothetical-protein	gnl|CDD|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	7.1566e-102
CP027241.1|AVM68378.1|719953_720691_-|tRNA-threonylcarbamoyladenosine-dehydratase	gnl|CDD|238384	cd00755, YgdL_like, Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.	2.08058e-88
CP027241.1|AVM68371.1|708987_710382_+|hypothetical-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.6139e-39
CP027241.1|AVM68384.1|723952_724903_-|hypothetical-protein	gnl|CDD|227300	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion].	3.82832e-16
CP027241.1|AVM68377.1|719336_719786_-|hypothetical-protein	gnl|CDD|377263	pfam04246, RseC_MucC, Positive regulator of sigma(E), RseC/MucC. This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions). In Pseudomonas aeruginosa, de-repression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonisation in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains an ApbE domain pfam02424, which is itself involved in thiamine biosynthesis.	1.93552e-29
CP027241.1|AVM68369.1|706288_707308_+|ATPase	gnl|CDD|225518	COG2971, COG2971, Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism].	3.39612e-41
CP027241.1|AVM68368.1|705138_706176_+|hypothetical-protein	gnl|CDD|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	5.7981e-09
CP027241.1|AVM68376.1|716020_717505_+|altronate-hydrolase	gnl|CDD|377287	pfam04295, GD_AH_C, D-galactarate dehydratase / Altronate hydrolase, C-terminus. Family members include the C termini of D-galactarate dehydratase (EC:4.2.1.42) which is thought to catalyze the reaction D-galactarate = 5-keto-4-deoxy-D-glucarate + H2O, and altronate hydrolase (altronic acid hydratase, EC:4.2.1.7), which catalyzes D-altronate = 2-keto-2-deoxygluconate + H2O. As purified, both enzymes are catalytically inactive in the absence of added Fe2+, Mn2+, and beta-mercaptoethanol. Synergistic activation of altronate hydrolase activity is seen in the presence of both iron and manganese ions, suggesting that the enzyme may have two ion binding sites. Mn2+ appears to be part of the enzyme active centre, but the function of the single bound Fe2+ ion is unknown. The hydratase has no Fe-S core.	0
CP027241.1|AVM68372.1|710460_711357_+|ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.87612e-80

Protein sequences

>CP027241.1|AVM68376.1|716020_717505_+|altronate-hydrolase
MLNFIKIHPADNVAVALTDLKAQTPITLGGDEFLLPADIARGHKFALRPLAAGESVIKYGHPIGQTTAAVKTGEWIHTHNLKTGLGEIMSYTYQPGDLTPLRTAEHFFSGYRQPDGRAGVRNEIWIIPTVGCLNSVVSAIERQAQSMLRGSIDSIAAFPHPYGCSQMGDDQENTKTILADLINHPNAGGVLVLGLGCENSNIEELKKLIGPYDERRVKFLTAQDSDDEVADSLALLEELTAYAATRRRERISTRELIVGLKCGGSDGLSGITANPTVGAFSDRLVAAGGTTILTEVPEMFGAETILMNRCASRELFEKTVALINDFKNYFIAHNQTIYENPSPGNKKGGISTLEDKSLGCTQKSGSAPIEGVLAYGEPVRHKGLHLLSAPGNDLVASTALAASGAQIILFTTGRGTPFACPVPTVKISSNSALYESKKKWIDFNCGELVTGRESLDSLGQKLFDYVLAVASGEKVKSEAAGFHDMAIFKQGVTL
>CP027241.1|AVM68375.1|714826_715972_+|hypothetical-protein
MLNTALIGAGGFGYCHLLALEKLISQQKIALKAVCDVNPCFRQELEAKGIAFFTDYRELLSTVPNLDYITISTPIPTHSEIAAACLAYGAHVLLEKPPAILPEEFARLTAAQTASGKSCAINYTMTADLAFLKLVQLLKNGELGRIHSITGTGLYKRYQSYYSGSPWLGQISYKDYPLRDGTINNPLSHLLNNMLLLAAASGSGRPVSAEAELYRVYPITGEDTSCLRILTEAGTRLLFYATLCSPEQTPARIEISGSQGNAVWQYPGYLQTDAGQDSYPAEENPTDKIHDNMCQFLLNGTPLFCPLSSCQNTVLVSDAAFASAKEIQTIPDTFIKGYQENGEHGRELIGIQDLVYSAATKQALFSEMSLPWAVSGQKILL
>CP027241.1|AVM70422.1|713478_714708_+|gfo/Idh/MocA-family-oxidoreductase
MKKPHNYAMIGCGHRGMYMFALPLVQHFTHTARLTAVCDSNPARASYVAERCGDVPYFTDFDLMLKSCEIDTIIIATTDDTHDQFILKSLYAGYDVICEKPMTIDDARCRAILKAEKETGKSVKVTFNVRFIPYVKRLKEMIAGGTIGEVLSVHLEYLLDTSHGADYFRRWHRRLDRCGGLLVHKSTHHFDMVNWLIDQRPEEVFAYGSTKFYGPTREQRSLRCTGCPYTDSCEFYFDLSEDPDYKALYLDAEEKDGYFRDQCVFADEITTYDTMSVNVRYQSGAYLTYSLIAHSPYEGYKVTFNGTKGRIEAAAYTNLLHPESGIEQITLFNRQGEAVVYNLPPSVGVHGGGDARLQKALFEPNFNDPLNQQASSFDGAMSILIGVAANRSIAEHRPVTIASLLADPK
>CP027241.1|AVM68374.1|712240_713434_+|N-acetylglucosamine-6-phosphate-deacetylase
MKHILSSPAAVFYGRDLYSSRSLAISTENGKITSIREIPADPSLPLVSPGWIDLQVNGCFGHDFNKAGVQSSDISNAAAKLHSCGVTKFLPTIITNSPERMAAGMAAVHQACLENPITAASVPGIHMEGPWISDQDGPRGAHELACVRDGSLSEFTALQQAAGGKICKVTLAPERNGAIDLIPQLTAQGVRVAIGHSNASRSDILAAADAGASISTHLGNGSHPVLPRHQNYIWEQLAEDRLYAGLIADGHHLPPAVLTAMLRCKGEKAFVVSDCVSLAGLAPGEYSDEIGSSVILAENGRLYMKSTPDILAGSSATLLQNLEFLAGTLKMALKDAVTLVTRRPSEAMGWPDSGTLAVGKKADLTFFDFDFNTGKIQVRQTVVAGVSVYRQDVCTPE
>CP027241.1|AVM68373.1|711356_712217_+|sugar-ABC-transporter-permease
MKQTAKTRKAFLFSLLFYGIATVLALIYMFPLYWMIVSSFKPMNEIFKIPFEWLPKTWTFKHYLAGWRFMGGISFSRVYLNTFFVTVMSVTGTVFTASLVAFGFARINFKGRNILFLILLATMMLPYQVTIVPNYLIFNALGLVDTLPALFIGSFLGGGAFYIFMIRQFFLGIPYELDEAARIDGASTFRIFSQIILPLAKPVLLTVTILSFSSAYNDFFSPLILINSLKNFTVPVAINVFLDEAGAGNIGASIAMTTLSIVPLLILFFSVQKQFMQGVVSSGLKG
>CP027241.1|AVM68372.1|710460_711357_+|ABC-transporter-permease
MKRRSVRTNLTGYLFISPWLISLLVFTLLPTLWSLYLSFTNYSLLSQPKFIGLENYINMFQNPTFWKSLKVTATYALLSVPLHIITALLAALALYRKKPGIGIYRTIFYVPSFIGGSVGVAVMWRMIFSDSGFINSFLVSMGLEKMKFFNSLSNALYTLVAIQTWVLGTAMLIFIAGLQQVPQELYESATIDGAGRVRKFFSITLPLISPMVLYNLILGIINAMQVFTSGFVITKGGPAKSTYFYVLYLYEEAFKYHNMGYASALAWILFLLIFVLTLIVLRVSKQMVYYETDQKRGA
>CP027241.1|AVM68371.1|708987_710382_+|hypothetical-protein
MKIRREFMKKNIHFLLGILLSLTIVLSACSGTTQQPKTDTTETKQTADEKKEEKPETTEKTTEAKTPVTLTVSWWGTDTRHAALQSAIDRFMQTYDWIKVESTFSGWDGYHDKLTVQLSTGNAPDLFAFGRGFAQQYGAGDTLINYLDHSAALPYFSEIQANLKNPYQTVNGRVIGLSTGISTLAVLYNKKHFDAAGVEYPSDNESWVSLSEKWQKVHAALPEIYGDNGWMYMPDIFPLMMKQLGQEIYDVSADPAKVTIDFDAANKIWSWNEALWENGTIARDSSDTIGFEAGNLASTLSASSVIPNTKNQTEDPLGFAVIPKTFDGSGKKIANPPVPGGLWGIPSSSKHIDEALMLLNFLQTDPEAVKAIGTQFGVPSVPSSLKLLQDNLEAGSLEYEMLDLVQRSQADIDEIWSLPMPKGYSQALEAYQVEMERYIFHDIDKDTFIKNAQEVMNQAIISAD
>CP027241.1|AVM68370.1|707377_708685_+|6-phospho-beta-glucosidase
MPKKEHLKVVVIGGGSSYTPELIEGLILHAATLPVKELHLIDVEAGREKLEIITALTKRMLTKAGSDIRVFSSLDRRSALPDADFVLTQIRVGQMPARTLDEEIPLSFGVLGQETTGVGGMMCGLRTIPVLLDICRDMEELCPDAWLINFANPSGMVTEAILRHSKIKAIGLCNAPLGFKKAAAAMLNVDEAEVSPEFVGLNHLHWVGSVLHNGKECIDTLLDGRYQSYTAANVSGIGWENEFIQALRAIPSYYLRYYYMKEEMLNDMLREYAAGEIRSHKVKAIEERLFRMYADPELKEKPEELSFRGGAYYSEAAIRLLDAIYNDRREIHAVNVQNQGMLPFLDDAASIEINCIVGADGAVPVKPRCIPQGISGLIRTVKEYESLTIEAAVEGSRSKALLAMGIHPLIPTTSITPKLLDALLTANKAYLPNFQ
>CP027241.1|AVM68369.1|706288_707308_+|ATPase
MPAIPISKQFNFPVSSANPIFFLGVDAGGSKTDALITDQAGTVLGSGRSGCGNHQLGAEAAARNIEAAVNQALHSAGLTKDAIAFAFFGLAGADRPADYSILRPLIAKLGFARWQIECDTMIALRAASRFPYGVVLICGTGINCAARSVSGTEIQIGGLGELYGDFGGGQSLANDGFRAVIRAWDGREAPTELTGIFLQTLNYPDVETMRDDFLDHNYQNVPLTVVPPLLRLAAEGDPAARAIACRQGKELALSAQTAIRRSNLQNEDFDVVLAGSVVVKGPDAYLRDIIAEEVTALAPLAKIVKLTAPPVIGAVLRAMDEAGTAVNPAVLESLKNVTL
>CP027241.1|AVM68368.1|705138_706176_+|hypothetical-protein
MKKRNFSMTEYWNSKAEVHVPLLSFGRHDNTDWRLWQQKAREKLIALLGELPAKVPLEPEVVYSVQEDDIIRERVIFDVEENMSIPCFVLRPQSMPATKKNPAIICCNGHPAHLGKDPVAGMRCEDEHCEAIRQMNYDYGLQMAKKGYLTIIPELRGFGERRDGIDPFPGRDACNVNFIKGALFGCYMLGLNVWDIMRTVDYLETRAEVDPKRIGMMGLSYGGTMTAFTTAVEPRIAAADVMGYINPWSEFAVKRANFCGIQLLPEIYKYFETHDIAGLIAPRPLLLEMGIYDDCFYIQDQLASSEQVKTIYDAAGSGDRFWRDIHAGGHRFAGNKAFDFFEKYL
>CP027241.1|AVM68377.1|719336_719786_-|hypothetical-protein
MRGNQMEVGQVIEVKDDQVILRMVRNAACGSCHACSMGAESQTLKLQALNLCAAQKNDMVEIRLDGDSFLSAVSILYGIPLIFLLLGIIGGSFLGEALFPAQKELVAIALGFGLTALSFLAIKSREKHFRREKYIPKAVRIVDPAMIDR
>CP027241.1|AVM68378.1|719953_720691_-|tRNA-threonylcarbamoyladenosine-dehydratase
MTSQFDRTAALIGETGVQTLRQKKVAVFGLGGVGSFAAEALARAGIGSLLLVDKDVIEETNLNRQLYALHSTVGKLKVEAARQRCLDINPDLRIDVRPEFYLKAGQIDISGCDYVVDAIDNVTAKLQLIADAKSKNIPIIVCLGTGNQLDNTRFQIADITRTTVCPLAKVMRRELKARGITDVKVVFSTAEPVLKQKIPASISFVPPVAGFYLAGEVIRELLTVQPNCTHNSLAANYECVRSANR
>CP027241.1|AVM68379.1|720735_721014_-|hypothetical-protein
MDYETYVQQGLNGEAKLKLILCGGVEKEADKNIGVVSVVYATQDRAAAEKKLAELTQENPQNYYMVYSVPLDTDLTKLNHYPSIAIAPEDLA
>CP027241.1|AVM68380.1|721180_721777_-|hypothetical-protein
MNRTEGKAEEKTENRNEEKREPLIWPKSGEILLNCGGRKVKRFCFARTELKEYELKMLQYCDIKGLHRPVLHWQGGQAILDFDLTAAELGERQVMEQPEAYVRQLLELERTLPEYLLTTEGLQIGPGAAAYFPESGEWRFCYLPLRDKDGLQDLDFFRKLFQKQARLFLQMEMMKEERELVLRDYLAAVRQAGDGGNG
>CP027241.1|AVM68381.1|721795_722029_-|hypothetical-protein
MNDDAGESAIYASPCLWSEARNGNRPGCGNPDGQHLFTNMNQAFGWLRICKKRKKLSIGENRRKKGKKKRGEKYGEN
>CP027241.1|AVM68382.1|722082_722352_-|hypothetical-protein
MKTKRQKSYENSRNWVLRQQCRWLVWQQQSLGRIRQVLGNNKGMGIVEIALIIVVIVALAFAFKVQIFRLLDSIFNGIDIKELGAQPKP
>CP027241.1|AVM68383.1|722414_723653_-|hypothetical-protein
MEKIRDKARAVLQFFFPEKKREILILLLLLPLIGLLSFCSRDNQKISALARPDFQEAEKNVVLSYRYQGEKQFSGSLPIHLGTKDEAREIIRRKLEAAAAEFQVKILQRDGKAKIEKARYLPNRWRGIEVEYQYQPADLFLAEGEWNYFELFRTKRQREIKIRAVLRYQEERAAVEVAETLRAEDFTEEYVQKLLTKQLKLVITNLEKEKTPELILPGEVAGGRLHWTALQSGGSFGGMMLGFVIAVLFLSILSRAAAREKQKEREKRYLRDFTQMMQHLVLLLKCGKSPFAAISGICGSTAGFGPEFVLALDTCRQGLYHQEPFAAVIQVFYRVCPLPDIQQFERLLLMAQERGDEQSILYLEQLKDKLFADRLRQGHEYMQKTTSRLLFPMLLFLIIIIILTMFPAFERI
>CP027241.1|AVM68384.1|723952_724903_-|hypothetical-protein
MTGIWKKSRIKAWLAETGGQDSEKRKPETAGSCPPETKKGNWAGAAKGCRFWHKNRQQKPEQTKAAGVDESRQKSKGTKGNRAKLRLTAKEKVIFYAAGGAVVLLLGWLFFESLILGALLLPVLVFTEERAAEEMEQRRKQKWEEDFGKYLTELDSQIRLGRSLESGMSEALRGGGLFAAEDWIVQKLEMNVSAADIFSELAEKKPMEGLKYFTAALESSLQSGGNLHELMQNSLIQIQKKLQMEKEISSMLTKVKYESRLLTLFVPFLLLYLKALSPNFRQVMYQTLQGRMVMGVCLGIYLLAAYLCYSMTQIEI
>CP027241.1|AVM68385.1|724826_726083_-|hypothetical-protein
MMSLMTYYQSIIEENKENRVSGESEEQKDERLRQRISQKLQAEDLALPEKIRLAKQLFDMLRRYGSIQPYIEDAQVNEIMIIGEDKLYLERGGEMEAVSHSYYFAGELNQIVQRMVSRLNKQVNEKNPICDLYLSSGERVSIVLPPVARQGPMVTIRKFGKKPLTWRDLIAGHTLTEEVAGFLQEAVRKKYNIFVSGGTSSGKTTLLNILTSAIPERERIITIEDARELRIDQIPNQVNLECRTESFAGCGEINARELIKAALRMRPDRIIVGEVRGEEAIDMLQAMNTGHSGSLSTGHSNSAADMVKRLETMVLSGVEIPIAAIRSQIASAIDLFIHLEKIHGRGRRIVEIAAVKGVKNGEIELESVYRYAFAADCLQKIKADFQLKERWERFDGDMEKKSNKSVAGRNRRTRLRKA
>CP027241.1|AVM68386.1|726201_727113_-|hypothetical-protein
MILIYLALNDREYQEKLAEGLAWRSSGWEVHSCESGGMLPVKPAEKAIWLLPAEPDEQRGMAESLHQQKNTLKMRQTPTQEEGECFCYQPLSEICKCLTERLYQLGLVEAPVSGTDEPERSYLYSPFGGIGVSDLAYRLAKELSRRRKTLLISFDAYQNFSREFIPFRLSDFLFYWKTLGQVNVRDFCLHEGGLDILHGPAKPEDLAVLRTGEKQDFMRILKQGGYQQIVFDLSSSGLLNWCLPLEEKERLFVVKRLAEKWKQFAAAVRFDYVAVSEEGALSEILNVIRQGTAPGASLPEDKR

Crispr_ID: CP027241_6

• CRISPR_ID: CP027241_6
• CRISPR_location: 766581-766808
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 3 spacers
• Cas_protein_info: cas3

Consensus repeat of CP027241_6

Consensus_repeat	Method
CGGAAAGCCGATTGCTCCGCGCTGTCGCGCTCCCGCAAT	PILER-CR

spacers of CP027241_6

>6.1|766620|24|CP027241|PILER-CR
CACTTCCTCCTAATTGTCCTCGGT
>6.2|766683|24|CP027241|PILER-CR
CGTTTCCTTGCAATCTTCCTCGAT
>6.3|766746|24|CP027241|PILER-CR
GCTTTCCCTGCAATCGCCTGTTCC

CRISPR arrays and Neighbor proteins around CP027241_6

CRISPR arrays

The CRISPR arrays of CP027241_6

>merge|CP027241|6|766581-766808|PILER-CR
CGGAAAGCCGATTGCTCCGCGCTGTCGCGCTCCCGCAATCACTTCCTCCTAATTGTCCTCGGTCGGAATGCCGATTGCTCCGCGCTGTCGCGCTCCCGCAATCGTTTCCTTGCAATCTTCCTCGATCGGAATGCTGATTGCTCCGCGCTGTCGCGCTCCCGCAATGCTTTCCCTGCAATCGCCTGTTCCCGGAAAGCTGATTGCTCCGCGCTGTCGCGCTCCCGCAAT

>CP027241|6|2|766581-766808|PILER-CR
CGGAAAGCCGATTGCTCCGCGCTGTCGCGCTCCCGCAAT	CACTTCCTCCTAATTGTCCTCGGT
CGGAATGCCGATTGCTCCGCGCTGTCGCGCTCCCGCAAT	CGTTTCCTTGCAATCTTCCTCGAT
CGGAATGCTGATTGCTCCGCGCTGTCGCGCTCCCGCAAT	GCTTTCCCTGCAATCGCCTGTTCC
CGGAAAGCTGATTGCTCCGCGCTGTCGCGCTCCCGCAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP027241.1|AVM68410.1|765491_766520_-|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM68413.1|770572_771409_-|transglutaminase	unknown	unknown	gnl|CDD|376628
CP027241.1|AVM70427.1|761233_762676_-|proline--tRNA-ligase	unknown	unknown	gnl|CDD|236327
CP027241.1|AVM68417.1|775273_776053_-|short-chain-dehydrogenase	unknown	unknown	gnl|CDD|223377
CP027241.1|AVM68414.1|771786_772944_-|hypothetical-protein	unknown	unknown	gnl|CDD|320681
CP027241.1|AVM70428.1|776657_777584_-|polyphosphate-kinase-2	unknown	unknown	gnl|CDD|213852
CP027241.1|AVM68420.1|778300_779266_-|hypothetical-protein	unknown	unknown	gnl|CDD|223745
CP027241.1|AVM68405.1|756946_759712_-|hypothetical-protein	unknown	unknown	gnl|CDD|227021
CP027241.1|AVM68419.1|777780_778272_-|cysteine-methyltransferase	unknown	unknown	gnl|CDD|234860
CP027241.1|AVM68403.1|753343_754048_-|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM68409.1|764761_765502_-|hypothetical-protein	unknown	unknown	gnl|CDD|223943
CP027241.1|AVM68412.1|766963_770557_-|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl|CDD|224118
CP027241.1|AVM68415.1|772936_773497_-|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl|CDD|376485
CP027241.1|AVM68408.1|762805_764749_-|hypothetical-protein	unknown	unknown	gnl|CDD|379716
CP027241.1|AVM68404.1|754380_756717_-|hypothetical-protein	unknown	unknown	gnl|CDD|378649
CP027241.1|AVM68416.1|773687_774962_-|adenylosuccinate-synthase	unknown	unknown	gnl|CDD|234904
CP027241.1|AVM68407.1|760850_761090_+|hypothetical-protein	unknown	unknown	gnl|CDD|376458
CP027241.1|AVM68418.1|776079_776646_-|flavin-reductase-family-protein	unknown	unknown	gnl|CDD|224766
CP027241.1|AVM70426.1|753199_753325_-|antitoxin	unknown	unknown	unknown
CP027241.1|AVM68406.1|759708_760458_-|hypothetical-protein	unknown	unknown	gnl|CDD|369296

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
CP027241.1|AVM68412.1|766963_770557_-|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	3.5e-16	53.9	0.3

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP027241.1|AVM68413.1|770572_771409_-|transglutaminase	gnl|CDD|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	2.73263e-20
CP027241.1|AVM70427.1|761233_762676_-|proline--tRNA-ligase	gnl|CDD|236327	PRK08661, PRK08661, prolyl-tRNA synthetase; Provisional.	0
CP027241.1|AVM68417.1|775273_776053_-|short-chain-dehydrogenase	gnl|CDD|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	4.90443e-92
CP027241.1|AVM68414.1|771786_772944_-|hypothetical-protein	gnl|CDD|320681	cd06166, Sortase_D_2, Sortase domain found in subfamily 2 of the class D family of sortases. Class D sortases are cysteine transpeptidases distributed in Gram-positive bacteria (mainly present in Firmicutes). They anchor surface proteins bearing a cell wall sorting signal to peptidoglycans of the bacterial cell wall envelope, which is responsible for spore formation under anaerobic conditions. This involves a transpeptidation reaction in which the surface protein substrate is cleaved at the cell wall sorting signal and covalently linked to peptidoglycan for display on the bacterial surface. The prototypical subfamily 2 of class D sortase from Clostridium perfringens (named Cp-SrtD) recognizes the LPQTGS signal motif for transpeptidation. Its catalytic activity is in a metal cation- and temperature- dependent manner. The presence of magnesium appears to enhance Cp-SrtD catalysis towards the LPQTGS signal motif.	2.53949e-52
CP027241.1|AVM70428.1|776657_777584_-|polyphosphate-kinase-2	gnl|CDD|213852	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1). [Central intermediary metabolism, Phosphorus compounds].	4.21649e-153
CP027241.1|AVM68420.1|778300_779266_-|hypothetical-protein	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	6.02383e-43
CP027241.1|AVM68405.1|756946_759712_-|hypothetical-protein	gnl|CDD|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	9.62837e-07
CP027241.1|AVM68419.1|777780_778272_-|cysteine-methyltransferase	gnl|CDD|234860	PRK00901, PRK00901, methylated-DNA--protein-cysteine methyltransferase; Provisional.	4.15672e-70
CP027241.1|AVM68409.1|764761_765502_-|hypothetical-protein	gnl|CDD|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	9.79642e-23
CP027241.1|AVM68412.1|766963_770557_-|transcription-repair-coupling-factor	gnl|CDD|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
CP027241.1|AVM68415.1|772936_773497_-|aminoacyl-tRNA-hydrolase	gnl|CDD|376485	pfam01195, Pept_tRNA_hydro, Peptidyl-tRNA hydrolase.	4.76713e-89
CP027241.1|AVM68408.1|762805_764749_-|hypothetical-protein	gnl|CDD|379716	pfam14897, EpsG, EpsG family. This family of proteins are related to the EpsG protein from B. subtilis. These proteins are likely glycosyl transferases belonging to the membrane protein GT-C clan.	1.73695e-05
CP027241.1|AVM68404.1|754380_756717_-|hypothetical-protein	gnl|CDD|378649	pfam11369, DUF3160, Protein of unknown function (DUF3160). This family of proteins has no known function.	2.58275e-152
CP027241.1|AVM68416.1|773687_774962_-|adenylosuccinate-synthase	gnl|CDD|234904	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional.	0
CP027241.1|AVM68407.1|760850_761090_+|hypothetical-protein	gnl|CDD|376458	pfam01106, NifU, NifU-like domain. This is an alignment of the carboxy-terminal domain. This is the only common region between the NifU protein from nitrogen-fixing bacteria and rhodobacterial species. The biochemical function of NifU is unknown.	6.28107e-25
CP027241.1|AVM68418.1|776079_776646_-|flavin-reductase-family-protein	gnl|CDD|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	3.26422e-44
CP027241.1|AVM68406.1|759708_760458_-|hypothetical-protein	gnl|CDD|369296	pfam07267, Nucleo_P87, Nucleopolyhedrovirus capsid protein P87. This family consists of several Nucleopolyhedrovirus capsid protein P87 sequences. P87 is expressed late in infection and concentrated in infected cell nuclei.	1.71446e-09

Protein sequences

>CP027241.1|AVM68410.1|765491_766520_-|hypothetical-protein
MKKRSFLLIVLVFLILFLPACREMASAELLPAILIKIDTAAVSGEEAAVYGIQVKKEFEQIGGADIWEFESFSGDKSAYEVAKTKVLENIIRVKVLLAKAKERKIELTEVETEAVANRAKEFLEDQKALAAAAEEITAETVQQVFTEFELGQKLKKEMLRSFQPEEKMIAAKLEANEDYQKLQQEDPWEKHELFLVETAEIAENDPLLETIRQELNTSPTYGLTDATSQSMVYKEEKYLKQQLEEVFGEGAAEQLRKTGWLLLPENEEKGFRLLHLKSIEVSDLALLTRRLQQQGEKEKDLRRQAEEEIRDESFEVIYQEWKKETDIRIDQEAWQGYTVFEL
>CP027241.1|AVM68409.1|764761_765502_-|hypothetical-protein
MSYNQATEMEISMFQNYVFSFYGTLAEVKMNLQEQGLWEKLSVYYGIYDYPVDADTLRRSFFTALAQEEEKKADKIYYEPNYEDILLRLFNVKKLKGKNRSPKDIGRFFHLLAAEELTLFPQVKKTLEQLKKEDRNVYLLANAQKAFIKDQLRYFGIKEYFDGLYISSDYSLKKPSPVFFNQVINENKLEKKKTLFVGGDFETDLLPAKKLGYLTCLVLRPGRALSPVEQADFVVENGELKKVLEF
>CP027241.1|AVM68408.1|762805_764749_-|hypothetical-protein
MSEKKISYGEYAILGVNKGLTAFLFSFILCLLLSLVINLRFYQELIMLTVGSLGEVGAAGSDTILRTTGLLLGLSFFQTSGKFQMGLLLLSVIPLSAFFGAGLLFRLKKPKDSYVNLISSVIIDGLAAAVYALFLFITAFLTKGVLFGVEINFASGRNLLFSLLFAVFIQFILGINRHKKFTNFTAGLLRTRNLLWLTLGFSALTGILFILYYLTPYLKSLVRILAFALVFLPNLAVYLSFMLMGVPLDLADSLGTLSNYLRLNTEILNLPVSIKVQLIISFIVLVFIVLLKMPVKKYWQNLFTFALGYSLSMLILAMSSRVDLGYVKGAFNIGLAVSPVKAFAVPFVIIWLDGLLLRLIRQIYRELCGESPKGAVASFLLGAEEEEVTYFKKRLSKKHTETDFPETDDESEPESEAEQTEKPAETPEEEIEIDIWKELAARPIPSREESDKPRILLWNEREPLPVKKWENLPEPAEAATKNEAAEEPDRERPESSARAEDTGAAKQRQSQTDGTEERAETKSQVPDGLEQLPELSEKEGAEVSRSDRKPERLSENGEEPKKEIDISLFPGWKKKARAAHSWMDFSDVEDELLSDEYEAEEILEDFVEKEETLAGTGEEEKSQTKVIRREKETEDWEQTIPYQIIRK
>CP027241.1|AVM70427.1|761233_762676_-|proline--tRNA-ligase
MEKAKEKLVEEITARDVDFAQWYTDVVKKADLADYSSVKGCMIIKPYSYRIWELIQQQLDQRFKESGHQNVYLPMFIPESLLQKEKDHVAGFAPEVAWVTHGGSAPLAERLCVRPTSETLFCEFYAKDINSYRDLPKLYNQWCSVVRWEKTTRPFLRSAEFLWQEGHTAHATAEEAEQETIRMLNIYDEFFENVLAIPVMKGRKTEKEKFAGAKATYSIEALMHDGKALQGGTSHYFGDGFARAFGIQYTDANNQMQYVHQTSWGVSTRMIGALIMVHGDDNGLVLPPAIAPYQAVIVPIMQRKAGVLEKAQEVKTILQAAGIRVILEDSDKSPGWKFAEHEMRGVPVRLEIGPRDIENGQVVLVRRDNGEKMTVSLAELAERLSLLLAQIQKDMFNRAKEHLSAHISSAVTIEEFREQLEKKPGFIKAMWCGRRECEEKMKEQTGATSRNIPFNEEHLADTCICCGQPAKHMVYWGKAY
>CP027241.1|AVM68407.1|760850_761090_+|hypothetical-protein
MVSKEAVIEALETIRPFLQRDGGDLEFVDVDENGAVYVRLLGVCGGCPISNLTLKNLIESQLAEMVEGVTEVIDLTGEE
>CP027241.1|AVM68406.1|759708_760458_-|hypothetical-protein
MISCSLNAVTANVIMAKRKEDNTMANFCTQCGSPISGGAKFCTACGTPVAAAGIAHSMAAPPVKVQPVYQQPPPTPQPVYQQPAPMPQPVHQQPAPMSQSVYQQPTPMSQPMYQQPTPTPQPVHQQPAPMPQPMHQQPQYGRNVPPRYAWPVPQKKKKGFLPLFLLIWAGLLGLGWYWVPDAVKDARLPIVPVVSEKEITAEQLEEYAAIDARVEAGTPASTEETDEPDSRHIWPVWLYGEKPGEEGEK
>CP027241.1|AVM68405.1|756946_759712_-|hypothetical-protein
MKKQPNKRLRFHLIVTLLLVMIVTGLGKPGFLLGFLRPKQAKINAAALVAPDRVPAVGHSDPFAAEPIPGFTIAAERNAMDHNREFKVTEMAWDVLSNLQDRFMDNDTGIMLLAGWEVDAGLGDDDRMPGTYTVGIDLKRLGIPEHLYHLLSAYRVDEAGHFYEYLTWIKNDSLFYASCQNSGVVLGVDEVVAVTGKEIIIEPAAPETGFFNGDGVYWVCDPADSSRRQYKIEYEQSNVSNQIYAQCNTIIADRSERARKEAEQQLPNATANERCDRVYKIKQRMYKEDPVYRQAIDAHKMTKQEEAEKSRQLVAKLGTMVYEAHKYLMSLNIRLPDQATTLYLLPKMNAYAETEPVGWFSGPYVNVGLDVLEQGSKQELDEMQLTLTHELFHVCQLRYNGIFHANVKFYEAMAQLLEEDAYRYFRSHPNVKGTENIITTEKNLENGKAYQYYVMPFDEKKATYYDDMGRAEKWSMNNTELCFSGYPIARFFDYLNETVSKKSFKEMMENYESVVTYMDLGGMDFTQHIKATWDLSDNMLTDAYLAFAKKYQTKFYECAKAKMNMTPARRLAFPASFIEKDKKTYFKLVDHAYSIRINSLMSSLDNIGRVGILVATDKDFYAQLTDMTLLPVGSGQWTKCKHGFYFYPHSGTSDIMEIDGGTNENPSAVSGYTVYQLEPPKLEKPKVEDGLLVFKLPEMSQAAKDDKIDGYRVTITCSDGKKTVYHPQIVIAGKTVKIKTSRLSHRYIAGFENLGYNVTVCEYIKDKDEKRYIYGPESDGSMDSLLEEMGAAEGEITASIYWPSKDDLDLHCITPNQSEIFYGCKFADGGELDVDMQVQAERDSGVENIYFATPVPGVYQFYVHNYTDRTDGDVGCRVRIKVGNQVLVDETVPMGGRSKIWKLEYRGFGKEQNVEILEDLP
>CP027241.1|AVM68404.1|754380_756717_-|hypothetical-protein
MLQFMPCPAEEKRETEERIMRRKGKWISLLCALCLLVSACSALPGKKEESKPAEQETKNVGKENSAQESDKDKPAANGENGQAEPVKNERPNFNEADVRKIDYADIINADTYTGFTKRQLELLKKNGFVVMEPKLNEDYPYLKMHQPYEHMEYTDHSMMITTDVVLHMWHVFYSESMKALETTEYLPNLEELSLKMEQQAIAAYQTGPDALDGAYANIIAFFHVANSLLFSETPGWIEQLGGKPHGDALEIAEAELGNIQAESAADSVLLGRAIDYSQFKVRGHYTTSPELTRYFKAMMWYGYMGFDLEKQPEEAALIVDLLTKNQDLMALWQKNYELTAMYSGESDDISVPEMEKALKSLKGKDLNQELINESGRKTLIKAFKSLPEPRIVAQLSEDNQDFAVGKAFKFMGQRFSVDAYIMQNLMKPIVRPLPTAFDVFAAMGFAPAESYLRANYDTNQKWPEYDDQLKRMKKEYADGELTDGDNFYNGWIRAIDRTLNYVPAGKEIPYFMTTPAYDYKKMNAALGSFAELKHDNILYSKQAMAEMGGPEENLTLHYLEPNEALYQELLTLSTHAEKLMKKAGIRDDYIRPLTSIKGMMKIFAEVARKELNGENITESELHELTYFGGLVEDLNAKYLYLLSAEGYDWEQPKTTALIADIATILPQNGVPGGIVEVATGYPYEIYALCHVNGVDFLAKGIVYSAFEFLNEERLTDEEWQQALGMAGQGEYGEVIFELSEYDMIREVYPNYYSEYASTEPNQVEISYEAEVDWPELKK
>CP027241.1|AVM68403.1|753343_754048_-|hypothetical-protein
MKTEFRVPKSKYSFVPKEKPAGLWRSPTAWVLLLLIILIVIFRLLAAKEVVAAAEYTQDGISYRAAIEGRAAVKYWRGSDFLEGRSLPQPFVLGREIVVYERPAAGGHWQEKKRYDFAGVGPWCVAMGQMDERKDIEVFIGAYRATRYFPEGPRPYFFTWDMEQQKLLRLWSGSYLDAPVFTAAAFEDMDGDGRQELKLDERQWLGETEYHYITYYTYWRSNFQPVKLKREVIE
>CP027241.1|AVM70426.1|753199_753325_-|antitoxin
MPFEITADPFYSSENTAVLDRRIADIKAGRNISEHELIEAE
>CP027241.1|AVM68412.1|766963_770557_-|transcription-repair-coupling-factor
MPSAAVHSAESLWHLRCCAEKLNIQLNEGVNRMDLLLKPLNDLEAFRLLKNKIEKQEGPLAVNGITDEQKVHLAYALTAGGKRQKLIVTYNELQVRQLAESFAFYEKEVWQYPAKDFIFYQADVRSQDIVRLRLAVLQKLLEGEDITVICSIEALKDALLPKAVFAAARIPLERGGQMAQPVLTEKLVNMGYERVPLIEGRGQFALRGGIVDIFPPFGEFAVRIEFFDDEIDSLRLINPDTQRSVREIESLEIFPNREIVLEPGMAKKAVERLRRDYKATAQKLKDNAEALAQLDKTVAALADKMENNGSFAGIESNLNYYFTETADLLDYFTEPLIILDEPLKVLEGVRTLETEYRESLENRFFKGHLLLEQKNSGLDYKKLIFRLAGKESLLLSSLYQAGKEIPYRAEVQISGSSAHLYHHDFEAMAKDLAYYVKQQYRIVVLTATGAMLSSLQELLENHGLPVFLAGESGETVAGKIALAVGGLRQGFIYPEIRFAVFAEAEARSSRRKKKAGSKTAGQRLQSFYDLKAGDYVVHESHGVGIFAGVETIETDGMARDFIKIKYQGDGVLFIPTTQLDRIQKYIGGEGAAPKLNKLGGQEWKRTVSKAKKAIDEMVADLIQLYSHREQAKGFSFSPDSVWQQEFEELFPYEETEDQLTAIADVKADMCSAKVMDRLVCGDVGYGKTEVALRGAFKAIQDGKQVAYLVPTTILAQQHYNNFVQRFKDFPVRIGILSRFSTPKEMKQTLADLERGLIDMVVGTHRLLSKDVSFKELGLLIIDEEQRFGVKHKEKIKQLKENIDVLTLTATPIPRTLHMSLIGIRDMSVLEEPPHERQPIQTYVLEHDEGLIRDAIYREINRNGQIYYVYNRVRNIEEVTGRLQALVPEASIAYAHGQMSEHELESIMLSFIRGEIDVLVATTIIETGLDIPNVNTIIIQDADKMGLSQLYQLRGRVGRSSRVAYAYLTYKRDKILQEVAEKRLKAIREFTEFGSGFRIAMRDLEIRGAGNVLGTSQSGHMDAIGYELYTKLVAGSISAKTSRTEAADDFETSIELKIDAYIPPEYINQEEEKLASYKKIASIRGEADYLDILDELIDRYGEPPKSVQNLLTIGLIKGLAHELEITSIQMRNAEVELTVLPNARFDGSKLLPFLEERKKEIRFQTKGSSAFLLRIPTPAQMLDQIKFVLQDLKKLRLS
>CP027241.1|AVM68413.1|770572_771409_-|transglutaminase
MKGEMKMKKWIVLIGLVIIGLGLISSEVSAEGIRIDESQSSQGKVGVYFNTGTTKKIKLMVSKGTEKYSYNLQNLDRMVYFPLQMGNGNYSVKVYENTEGNKYRPLTGKDFNVTLSDPNSVYLQSVQEIDWDEQKKAIKISQKLIQDQEKELGRKLTEDEKTKVLYQYIIEKIVYDYEKIKRIDTSYIPNIDDTVTTQNGICYDYSSLFAAILREQGIPTKMIKGYSTYTTVYHAWNEVYVGGKWVIVDSTTDAYMFQNKAPYTFEKQLKDYNKAKEL
>CP027241.1|AVM68414.1|771786_772944_-|hypothetical-protein
MGRIFNEKALQGNIKEKEKMKEQEKMVANTDDTKVTENIGNAENIESLAGAGSPEAINPAERADSERKEPEKSDPEKTEPKKTAGNTESGEAEKINDNRAAAPKKWSWRSHLGNLLLIGGIAVICIPFVGRYLADRQQQQMLKEFYDQIGSEVGTEAEKLNRELGYTDDATLQGDLDASAKAIREIEQSEGLNPNTVTKLTTGPTAIGIIEIPKIKLKYPVAEGVDNVTLRFCIGHMPKTAGLGEVGNSVLAGHRSHSFGDFFNRLDEVETGDTIWIKTKSSSTAYIVYEKKRVNKKDLSVLSQKGSDKVLTLITCELGVNPEERIIVKAKAEGAEAPAESAPAPAEQKSAQPEQTPAPANQTEQPEKTPESPAPATPTEKPAQQ
>CP027241.1|AVM68415.1|772936_773497_-|aminoacyl-tRNA-hydrolase
MKIIAGLGNPGMQYMATRHNIGFEVIERLAYETGIHLDKKKHRAILGQGQIGGEKVILLQPQTYMNLSGESIRAVMDFYSLTSQDVAVVYDEISLDLGQLRIREKGSAGGHNGMKNIIAHLGTQEFIRFRVGVGPQIPGMDSADFVLKRMSREEIKIAAEMALRAAEAITAYLEQGITYAMNHYNG
>CP027241.1|AVM68416.1|773687_774962_-|adenylosuccinate-synthase
MAVRVIIGAQWGDEGKAKYIDILAAKADMVVRYQGGNNAGHTVVVDNKVYKFHLVPSGILYPNTLCVIGNGVVIDIKGLLEEMAELAEQGVHFENLRISLRAHLVMPYHKVLDQLHEAYLGEANIGTTGKGIGPCYTDKADRSGIRVCDLLEPEVFAAKVKQNVKFKNEMIEKIYLSDRTLDADKIIEEYLGYAEQLKQYFTDTTALISEAAEAGQEILFEGAQGTLLDLDLGTYPFVTSSHPTTGGISSGSGLGMNKLTQSIGVMKGYVTRVGSGPFPTELDDEIGEQIRQVGHEFGTTTGRPRRTGWFDAVIGRFAVRTNGLTDIALNKIDVLSGLPVVRVCVAYEKDGRQIKDFPASLNELARCRPVYQELKGWGDISHIRRYEDLPAEVKDYIAFIEEKCGAKVSYVGVGPNRDQNIEVK
>CP027241.1|AVM68417.1|775273_776053_-|short-chain-dehydrogenase
MVKYTLITGATSGLGLELARIYAAKAENLILVARREEIMKKLAEELAERYQIRVQTFAGDLSRPETARKLVQWTREKGYEVDTLINNAGFGSYGEFHKSDLKKEWEMLQLNVMTLMYLTRAFLPGMVFRGRGGILNVASVAAFAPGPRMADYYASKAYVLSFTQALAAELKNTKLKISALCPGPIQTGFQDRAGLSESKRFSQMAQSGWSAKQVARYAYERFQQGEVVIVPGLSNQILAVLGRKVPLKLVRRVMACAQR
>CP027241.1|AVM68418.1|776079_776646_-|flavin-reductase-family-protein
MERQNWKAGNMLYPVPAVMVACQRPGEKPNIITIAWAGTICSSPAMLSISVRPERYSYDILRETGEFTVNLVTPELTRAADYCGVRSGRQVDKFKEMKLTAYPSEQIKAPGIGESPVILECRIKNRLELGTHDMFLAEIVNVSVQQSEIDETGKFHLNSLGLVAYSHGEYFSLGEKLGKFGYSCQKVK
>CP027241.1|AVM70428.1|776657_777584_-|polyphosphate-kinase-2
MEKQWLNLDSPEAGAAEETEACADCAGTEPVEKEKKKSKNGRISSKLYEKELRRLQIELIKLQDWVRLKGLKVLVLFEGRDAAGKGGAIKRITEHMNPRFCRVVALPKPTEQERSQWYFQRYVQHLPAAGEIVLFDRSWYNRAGVEKVFGFCTEEEYQEFLRSCPQFEEMLIRSGIILIKYWFSVNDEEQEKRMQDRIDDPLKTWKFSDIDLESRKKWVEYSKAKDRMFERTDTYISPWNVVESDIKKHARLNCIAHLLSRIPYEETEKKKFELPKIEKDKEYVRPDIRMQKFVPDYAGKVMAENGEA
>CP027241.1|AVM68419.1|777780_778272_-|cysteine-methyltransferase
MKAFYFYDYPAQAIGRLGIGEEDGALVQVFKAEPEDLPLSGFLLRETKLLKETDRQLREYFSGQRKEFTLPLLLRGTEFQKKVWQALCEVPFGKTASYQEIAERIESPKACRAVGQANHHNPISIIVPCHRVIGKNGGLTGYGGGMEMKQYLLTLEKQGLSYF
>CP027241.1|AVM68420.1|778300_779266_-|hypothetical-protein
MNRLNICWGLLGVSDATEIKSGPGLYKNPNSVLEGVYDQNKEKALRFAFRHGAAKAFESVEDMLADQYIDIVYIAAPADMRCALALQCLEAGKAVYIENPIALSYEQALAIDAKAKAEKLPAYAALYRRGLPKFMNIKNLLTSGQIGDIRMIRVTHWAKPTEDERKGEAMPQFQGGDKFWRLGIETLDILEFYFGKMTDFTGQVFNQGGSDPTGDTITATFRHENGAVGTGSWCYAADKDQEEVMIVGSKGNLRFSVFGKEAVILEKRGEFEMFNYRMPNHIAMPYQAGIVRELLDMGESNADWEQALDVIKWVDRLYYKK

Crispr_ID: CP027241_7

• CRISPR_ID: CP027241_7
• CRISPR_location: 874422-874529
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP027241_7

Consensus_repeat	Method
CTCTAAATTATCGGGTTGGTAAAAA	CRISPRCasFinder

spacers of CP027241_7

>7.1|874447|58|CP027241|CRISPRCasFinder
TACTCTCTAAATTATCGGGTTGGTAAAAACAGCCCGTTTTTTCTTTGAGGTTGGTGGC

CRISPR arrays and Neighbor proteins around CP027241_7

CRISPR arrays

The CRISPR arrays of CP027241_7

>merge|CP027241|7|874422-874529|CRISPRCasFinder
CTCTAAAATATTGGGTTGGGGTTGGTACTCTCTAAATTATCGGGTTGGTAAAAACAGCCCGTTTTTTCTTTGAGGTTGGTGGCCTCTAAATTATCGGGTTGGTAAAAA

>CP027241|7|5|874422-874529|CRISPRCasFinder
CTCTAAAATATTGGGTTGGGGTTGG	TACTCTCTAAATTATCGGGTTGGTAAAAACAGCCCGTTTTTTCTTTGAGGTTGGTGGC
CTCTAAATTATCGGGTTGGTAAAAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP027241.1|AVM68496.1|873305_874346_-|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM68504.1|882486_883464_-|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	unknown	unknown	gnl|CDD|236467
CP027241.1|AVM68503.1|881265_882339_-|peptide-chain-release-factor-1	unknown	unknown	gnl|CDD|234801
CP027241.1|AVM68501.1|876740_878408_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl|CDD|225174
CP027241.1|AVM68506.1|885203_885470_+|type-II-toxin-antitoxin-system-antitoxin,-RelB/DinJ-family	unknown	unknown	gnl|CDD|274102
CP027241.1|AVM68505.1|883643_884744_-|hypothetical-protein	unknown	unknown	gnl|CDD|367370
CP027241.1|AVM68491.1|868388_869597_-|hypothetical-protein	unknown	unknown	gnl|CDD|372367
CP027241.1|AVM68500.1|876440_876722_-|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM68490.1|867976_868330_+|plasmid-mobilization-relaxosome-protein-MobC	unknown	unknown	gnl|CDD|368576
CP027241.1|AVM68502.1|879522_880440_-|hypothetical-protein	unknown	unknown	gnl|CDD|225761
CP027241.1|AVM68493.1|870397_871069_+|hypothetical-protein	unknown	unknown	gnl|CDD|223692
CP027241.1|AVM68492.1|869784_870396_+|hypothetical-protein	unknown	unknown	gnl|CDD|224228
CP027241.1|AVM68498.1|874725_875577_-|nucleoside-triphosphate-hydrolase	unknown	unknown	gnl|CDD|236153
CP027241.1|AVM70432.1|878543_879500_-|hydrolase	unknown	unknown	gnl|CDD|237394
CP027241.1|AVM68488.1|866412_867060_-|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM68489.1|867106_867679_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
CP027241.1|AVM68499.1|875573_876353_-|replication-initiation-protein	unknown	unknown	gnl|CDD|369151
CP027241.1|AVM68495.1|872544_873123_+|hypothetical-protein	unknown	unknown	gnl|CDD|370580
CP027241.1|AVM68494.1|871069_872470_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213192
CP027241.1|AVM68487.1|864476_866264_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP027241.1|AVM68504.1|882486_883464_-|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	gnl|CDD|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	4.24753e-113
CP027241.1|AVM68503.1|881265_882339_-|peptide-chain-release-factor-1	gnl|CDD|234801	PRK00591, prfA, peptide chain release factor 1; Validated.	0
CP027241.1|AVM68505.1|883643_884744_-|hypothetical-protein	gnl|CDD|367370	pfam03169, OPT, OPT oligopeptide transporter protein. The OPT family of oligopeptide transporters is distinct from the ABC pfam00005 and PTR pfam00854 transporter families. OPT transporters were first recognized in fungi (Candida albicans and Schizosaccharomyces pombe), but this alignment also includes orthologues from Arabidopsis thaliana. OPT transporters are thought to have 12-14 transmembrane domains and contain the following motif: SPYxEVRxxVxxxDDP.	0.00303548
CP027241.1|AVM68491.1|868388_869597_-|hypothetical-protein	gnl|CDD|372367	pfam12892, FctA, Spy0128-like isopeptide containing domain. The FCT and equivalent region genes of Streptococcus pyogenes and other related bacteria encode surface proteins that include fibronectin- and collagen-binding proteins and the serological markers known as T antigens. Some of these proteins give rise to pilus-like appendages. The FctA family is found in many Firmicutes and related bacteria. In S. pyogenes, the pili have a role in bacterial adherence and colonisation of human tissues. Members of this family have a conserved N-terminal lysine and C-terminal asparagine that can form a covalent isopeptide bond.	8.25313e-14
CP027241.1|AVM68501.1|876740_878408_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl|CDD|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	3.31135e-147
CP027241.1|AVM68490.1|867976_868330_+|plasmid-mobilization-relaxosome-protein-MobC	gnl|CDD|368576	pfam05713, MobC, Bacterial mobilisation protein (MobC). This family consists of several bacterial MobC-like, mobilisation proteins. MobC proteins belong to the group of relaxases. Together with MobA and MobB they bind to a single cis-active site of a mobilising plasmid, the origin of transfer (oriT) region. The absence of MobC has several different effects on oriT DNA. Site- and strand-specific nicking by MobA protein is severely reduced, accounting for the lower frequency of mobilisation. The localized DNA strand separation required for this nicking is less affected, but becomes more sensitive to the level of active DNA gyrase in the cell. In addition, strand separation is not efficiently extended through the region containing the nick site. These effects suggest a model in which MobC acts as a molecular wedge for the relaxosome-induced melting of oriT DNA. The effect of MobC on strand separation may be partially complemented by the helical distortion induced by supercoiling. However, MobC extends the melted region through the nick site, thus providing the single-stranded substrate required for cleavage by MobA.	0.000432779
CP027241.1|AVM68502.1|879522_880440_-|hypothetical-protein	gnl|CDD|225761	COG3220, COG3220, Uncharacterized protein conserved in bacteria [Function unknown].	2.19627e-20
CP027241.1|AVM68493.1|870397_871069_+|hypothetical-protein	gnl|CDD|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	2.43254e-08
CP027241.1|AVM68492.1|869784_870396_+|hypothetical-protein	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.12197e-10
CP027241.1|AVM68498.1|874725_875577_-|nucleoside-triphosphate-hydrolase	gnl|CDD|236153	PRK08116, PRK08116, hypothetical protein; Validated.	9.88135e-116
CP027241.1|AVM70432.1|878543_879500_-|hydrolase	gnl|CDD|237394	PRK13480, PRK13480, 3'-5' exoribonuclease YhaM; Provisional.	7.69081e-61
CP027241.1|AVM68506.1|885203_885470_+|type-II-toxin-antitoxin-system-antitoxin,-RelB/DinJ-family	gnl|CDD|274102	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family. Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all were found adjacent to toxin genes. The resulting model appears to describe a narrower set of proteins than pfam04221, although many in the scope of this model are not obviously paired with toxin proteins. Several toxin/antitoxin pairs may occur in a single species. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	7.00869e-16
CP027241.1|AVM68489.1|867106_867679_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	7.3115e-12
CP027241.1|AVM68499.1|875573_876353_-|replication-initiation-protein	gnl|CDD|369151	pfam06970, RepA_N, Replication initiator protein A (RepA) N-terminus. This of family of predicted proteins represents the N-terminus (approximately 80 residues) of replication initiator protein A (RepA), a DNA replication initiator in plasmids. Most proteins in this family are bacterial, but archaeal and eukaryotic members are also included.	5.21651e-29
CP027241.1|AVM68495.1|872544_873123_+|hypothetical-protein	gnl|CDD|370580	pfam09605, Trep_Strep, Hypothetical bacterial integral membrane protein (Trep_Strep). This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. It is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.	5.02188e-21
CP027241.1|AVM68494.1|871069_872470_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	2.49074e-82
CP027241.1|AVM68487.1|864476_866264_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	4.68642e-133

Protein sequences

>CP027241.1|AVM68496.1|873305_874346_-|hypothetical-protein
MKITKKFIALIAVMAVTLGLFSNIDDASATTSKDGYNITVSNIQVSPGQVDVGSLASLKFDFNIETQSGNAMKPGDTINLSTNIGTMFGSLPTSEIAIFSDNGQQIATAVVTGTEVKITLGADFPADRNFLTGSIYTGARLKALDNGATDGNPVTKALTIEDANANVTFKVKAAAPGTGTGGIGPSPGARTINNRLLEKQGWPSGYDTAHIKLIGNQLGSLRLFNTYNKIDDAFGTYQEQTNLMLVDKIPHNGVIDIDTISFTAVRYNWAEVPAGGNPHYTSAAAGTVMPIESGSNWLPVSQYFTQITQSSSDTYDSFYAKIKAQKLSYGVFRELVIGKTKYKNII
>CP027241.1|AVM68495.1|872544_873123_+|hypothetical-protein
MTNKLDVKTMIKLAIFTVVLYILIRVSSLVSLIPGVYPFTAAITLIPVGIVWIYLRMKVKAKYSILIQCTLLSILTFVGGSPYFIALGMLLGGVLAEFITFDKNGNSTHRSILYGYIGFGFVFYISTYLIMLVARDYYITYIESLGMPIDMVLRLVNLVTLPTFIIGMLLVPICSFIGLHIGKKVFVRYFNK
>CP027241.1|AVM68494.1|871069_872470_+|ABC-transporter-ATP-binding-protein
MIELKDVSFSYYKGPKALNNISLNIKKGELILLLGESGSGKTSLARTINCLVPKFFDGDFKGEVNVLGKPTKDLSMVDLSSMIGTVFQNPRNQFFTLDTTSELAFNLENHGINPELIKSRVFDIFNDLNINHLKDKDVYKLSGGQMQMVAIASACALNPEILVLDEPSANLDRSSISDLIELLKIFKSNKTTVIISEHRLYYLKDLVDRAFYIKDGEIKNIFKGYELYSMNDRKRLEYGLRSLNDDSILIKNKPSEKDENLLEFKNLSVGYKKPLISKMNLKIESGEVLGIIGENGSGKSTLLNTISGLIKEISGEILFNGKKLNRRDRQKLCALVMQEPSYQFFMESVEKELTFGIKNYDENKLNKYLQDMNLKNIKDNDPLKLSGGEKQRLAILINLLDNKDVFLLDEPSSGLDYKNMLVISDEIKKLQEKGKIIIIISHDYELLSEVCTKIIYYNQGGFIKMT
>CP027241.1|AVM68493.1|870397_871069_+|hypothetical-protein
MIKFSMKTKIIILILMNLLITLQTSLNTELFVIIYISLFYILQREFKFVFKSLAIYSLISLLIYCLAQMNNLIVGSIVFTLIIAKKLFPNIFFATAMVKTSHFGELLYALSSFKLPKKIVIMLSIIFRFFPSFYLEMKNNTRAFKLRTYKVSKLSEYFYYFIYFSVVPLMRRAELVSDELSQVAVLRGIESNNPRTSMFAEPLYFYEYIAIFLLAGLFLYEVF
>CP027241.1|AVM68492.1|869784_870396_+|hypothetical-protein
MVNGYLETYNKLIESAKREFENKEYEKVSIRNIASGANLTIGALYQHFKNKEDLYDCIVSPICDGFISITNDRNKDFIDSLERDEFSIISEELSYITNDLLKYIYDNWKIFRILILNDKTKIYKTFFNTIVENETKMTQLMIEKKNISQYEHLTFKKLKSLISAQYQGIFALMRTEDDIKNLDNDLHLLFDFFRYGWIGVLGI
>CP027241.1|AVM68491.1|868388_869597_-|hypothetical-protein
MRVLDPATGGDTFIANFSNDSLKYTDLEPDLGGMNKIKDIYGPNGPSQGNIVTFFAEFDTHYPEITGLENVTNKGEISSDQASDEASVTYTIDKSAGTATVSAGTIRLKVVDEIDNTTPIKGAEFKIQTKLNGKWSDYYIRGRKAIAKSNASGEAVITGLSRGEYRLVQTSAPGAYKFDNNVFKPNPAYTTSGSLNATEGTFSILNATQPGFSAIVPNYQKVDAKIKGSKEYVDQDNTALTIPANTFEVTLAQIPTETYDGVTMPQALTAAVGTDGSFEFDKIEFKKPGTYKFKVSENRANPLAGVVYDNAEKEVTVTVTNDNGTLKAVVDSEPAFKNVFNYTTANFKVKKALTGDQAPTAEEFKFELSAVGTTAAGVNDVPMPAGSVLTKICSSVFSPFTM
>CP027241.1|AVM68490.1|867976_868330_+|plasmid-mobilization-relaxosome-protein-MobC
MANRIRNERLEIKLTKAEKAHFEEKRKLAKCRNMSHFIRKCVLEKEIYQVDLEPFRDLQGLLSNATNNINQIAKRVNSTGGIVHKEDIGDIKKEIEHFSKELWQIHSLLLNRTSGGD
>CP027241.1|AVM68489.1|867106_867679_-|TetR/AcrR-family-transcriptional-regulator
MAQVLKEEVRNRILESAEKVFYKKDYRGAKLTEIAKEANIPVALIYTYFKNKEVLFDAVVSSVYINFESAFNEEESLEKGSASERFDEVGENYIHELLKERKKLIILMDKSSGTKHTEAKQKLISQMQIHIEVSLKRQSKRKYDPMLAHILANNFTEGLLEIARHYQSEKWAKEMLKLIARCYYKGVESL
>CP027241.1|AVM68488.1|866412_867060_-|hypothetical-protein
MSYCSKKNKRLWREMQKDWKEEIVCKIPWNEFSKYNFKDNNEWSLGDCEQSPLCQMIWGEIISDFLTNKDKEKYNYLINRYYLIVKNDKERYRFLFDVMNNGKLCYDINEQGYDYHFIGNFTPIPANNMKRKRSLQFIHKDFNEDWNKMIKYINQNWNDFDMNFSFEDYIKMTLQEDYYSNDKFSKISCSEKIKELIKKRGETIQKKCEELFKNS
>CP027241.1|AVM68487.1|864476_866264_-|ABC-transporter-ATP-binding-protein
MPEKELRKKVIGKNGLSNSLLALKIVFDLIPQILLVYLISSLITSNINEGDLKYIFLGIFISFALKGVFYYFATKVAHEKAYEKLTELRLDIIGHLKKLSLGFFKEHNTGELTNIVQHDVEQVEVYLAHGLPEIMSVTLLPTIIFVAMIFVDWRLALGMIAGVPLMYLVKVLSQKTMDKNFSIYFNHENKMREELMEYVKNISVIKAFAKEEEISERTLKTAREYIYWVKKSMGAITIPMGLIDIFMEIGVVIVMILGSIFLYYGNITTPNFILAIILSSAFTASISKTATLQHFSIVFREALKAIGKVLTVPLPNKKTEQGLEFGNIEFKDVNFAYGKDCFELQNINLTFKKNSLNAFVGASGCGKSTVSNLLMGFWDADEGQILINGKDIKEYSQENISMLIGSVGQEVILFDLSIFENIAIGKLNATKEEVIEAAKKSRCHDFISALPNGYETRVGEMGVKLSGGEKQRISIARMILKNAPILILDEAMAAVDSENERLIGEAIDDLSKDKTVITIAHHLNTIRDSDQIIVMDKGVVLDAGSHEELMKRCDFYKDMVEAQNKVDRWNLKDDSLSRARNGVDCECTEVVTENV
>CP027241.1|AVM68498.1|874725_875577_-|nucleoside-triphosphate-hydrolase
MMKELEKVIIEDVEYSYDPEKEYIKDGHAFCKVCHERKDGKVMEFFDNKMIFKISCKCDRNREAKEKERQKQLEIERLKSICFTSIIQWAYTFENYQGKENQSLIIAKNFVKDYEEMKKENIGLLFYGSVGSGKTYLACSIANALIEQYQVRVKIRNFAQIINELQKGGFDLDKNAYIESLVNTSVLILDDLGIERDTSYAKEQVYNIVNNRYLKQKPTIFTTNLSYDTILNCTESVEYQRIYSRIIEMCIPVMVVGEDFRKVIQKDKLARNKERLLNGGERT
>CP027241.1|AVM68499.1|875573_876353_-|replication-initiation-protein
MDFDYFYNREAERFNFLKVPEILVDGEEFKGLSAEAIILYSMLLKRTGMSFKNNWIDKDGRVFIYFTVEEIMRRRNISKPTAIKTLDELDMKKGIGLIERVRLGLGKPNVIYVKDFMSILAVKENDFQKSKNLTSEVKDFNLRSKENELQEVQNLDSNYIENNKSKYSKREYSFGENGLGTFQNVFLTAEDISDLQIIMNSQLDNYIERLSAYIKSTGKTYKDHKATILSWFYKDQGRGKEVKTSNIPTWEEYDKGEHL
>CP027241.1|AVM68500.1|876440_876722_-|hypothetical-protein
MRWILKIILFPIRLLLSILTAFLTFLLGIGTTILYFLMLMCIVAAIGSFMQKDISLGIEALVLGFLLSPYGIPMIGAAVIAFLQGINEAIKSI
>CP027241.1|AVM68501.1|876740_878408_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MKRKAPVKKNEELMITIEDVSAEGEGIGRYEGYTLFVPKTLPQEVVKVKVLKAGGSFGYAKTLDFLKTSPLRQEPDCPAGPLCGGCTLQHIRYEETLKLKQKQIKDCLERIGGLTDVSVPPVLGMVDPTRYRNKMQYPIRTGKDGEVQIGFFAPASHRVIEAPVCCQQDEWVGVILQKIKEMMKNGGFTAYDEERHTGLLRHCVIRKSDLYQNFHLTLVVNESKMTERLAQAIRQTFAGLSQISGVSINFHNEKNNVIMGRKTEAVLGELYVEDHIGRYRFLISPNSFFQINSVMTERLYQTALEYAALTGNERVIDLYCGIGTISLFLAEKAKEVIGVEIVPEAIADAEKNAVRNGVQNARFYAGKAEEIFPRLYAEGKRAEVIVVDPPRKGLEESVVETLRHMQPERIVYVSCNPATLARDIKRLAAADTDGARYQLAKVQGLDMFARGGHVETVALLSKLDVDKHIDVEIKLDELDLTSAESKATYAQIKKYILEKFDLKVSTLYIAQIKKKCGIVLREHYNKSKKEKQVIPQCTPEKEEAIMDALRHFKMI
>CP027241.1|AVM70432.1|878543_879500_-|hydrolase
MIYLAEVKEGERIQEVYLCVTKQVLKTRAGKTYYSMTLQDKSGSIDAKIWDLTDAVGHFEAGDFIKIDGSVVSFQNANQLNVKRVRRSEPGEYDPANYIPTTKQNPEEMYRQLLGYVSSLKNSYIRALAEELFVKDTDFVGRFKKHTAAKTVHHNFQGGLLEHTLGILKICDFLAGQYPVLDRDVLLMGALLHDIGKMQELSEFPLVDYTDEGNLIGHIVIGVERMNEKIRQIPGFPADLANILRHMVLAHHGELEYGSPKRPAIIEAMVLHYADNIDAKIMTFQTLLAESENEDTWIGYSKLFDSMLRRTRYKSQEK
>CP027241.1|AVM68502.1|879522_880440_-|hypothetical-protein
MKWGCNYSKALLELLKQGELPELNYIKAGAFGDNDLEAAFAQRPLLLHGFGWYERIGMDLTKAEIPKEYGGNLTKAVQRMNELLYYYDSPHVAFHCLVYPEDMADLSGDQAEKEWQLHERMKQNILYLKEHLEVPVLIENIDYCPEYPKIGQISTVSYAAQPETIKRLVEETEIGFLFDLSHARVSAEHLGMAFDEYCRRLPMNRVKEIHLSGSADFAEYYQRMPEDRQKAIRLSNDGHCPKLGRIDVHEELTEEDYIWIEKLWQKNTPEYVTLEYGWAKDSAGRVTSAEAIIRQMKRLMEILPN
>CP027241.1|AVM68503.1|881265_882339_-|peptide-chain-release-factor-1
MFENLEVTEKRYEEVGRLVSDPAVIANQEEWQKLMKEHNDLTPIIEKYRDYKKAKETIRESLEILEESSDAEMKELAKEELAEAKESTAALEEEIKILLIPKDPNDDKNVFIEIRGGAGGDEAALFAGDLYRMFTRFAERHRWKTEVVSLNEIGVGGIKEVIFMVNGKGAYSKLKYESGVHRVQRVPVTESGGRIHTSTVTVAVLPEADDVEIDLDMNDVRVDVFRSSGNGGQSVNTTDSAVRLTHIPTGIVVSMQDEKSQLKNKDKAMKVLRARLYDMELEKKEKELAQNRRNQVGTGDRSEKIRTYNFPQGRVTDHRIKMTLYRLNDFLDGDLEEMINALTTADQTERLNSMEKE
>CP027241.1|AVM68504.1|882486_883464_-|peptide-chain-release-factor-N(5)-glutamine-methyltransferase
MNYHELLNKAKQELAATGKAENDAKELLLFLKDWRLQDYLLSGKAEVSAADVASYHVLLERRMAGVPLQEITGSQNFYGYEIAVSPDVLTPRPETELLAELALKEMAGLAQPKVLDLCTGSGCIAIVLAAENPAAEVTAVDISEKALAQARKNGERHGLNSRIKWLQSDLFAGLSAEKFDFIVSNPPYIAAAEMKDLEAEVRNYDPELALDGGADGLDFYRQIAGRAASYLRRGSAAYCRVPADLIEKKQAATEENEAKSVEPGSALVQEKARGGRLLLEIGCGQGTAVAQLLRVNGWQEIGILPDLTGRERIITATAPRTEVKL
>CP027241.1|AVM68505.1|883643_884744_-|hypothetical-protein
MGIFAKIKEKLRSYWTPYEVTYIGGYDTKELRESDNPAAKLAGWQAENDAALAEHLPRAARNEKRLQLTDRFARFPERRRNVLVQMAKQYSALRGQKQEAKDHHEEMREYLNQISDLTFDEDLPRVLKIIEENELEFQKVQKDLSYLEGERSSLEYEFKRSRIGLLLTGIVLYAAVAAAILGTIFLFLLSKRQNIFVPAVVLILSIGFFGIWAAVFRRYFRSALEKNGKMQQRAVKLMNKVKLKYVRYRRLLDYEYKKFEINSSEGLRLRYEIFTKEKHQRQRYEDLEKQQRLTALDIAREMAAMLPEKEEELIDLFLQDSDYYASAGGRDRLKERLTEEKEELLRRGRELENERKVLRQMETMLP
>CP027241.1|AVM68506.1|885203_885470_+|type-II-toxin-antitoxin-system-antitoxin,-RelB/DinJ-family
MAQTVNVNFKLDADVKKSMEAVCSELGLSMSAAFTVFAKKVSREKRIPFELSADPFYSESNIRYLEGIMHDIKAGKAHFAEHDLIEVD

Crispr_ID: CP027241_8

• CRISPR_ID: CP027241_8
• CRISPR_location: 922485-922644
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP027241_8

Consensus_repeat	Method
TTTTCTTTCTGCGCGGGGCGCAGCCTGACTGAATCAAGGTGCTGCGGGCCTC	CRISPRCasFinder

spacers of CP027241_8

>8.1|922537|56|CP027241|CRISPRCasFinder
GGCCGGTTAGTGGTCTGCCTTTTTCCTGCTTGGTTCACCTCTGCCCGGTCGAAAGC

CRISPR arrays and Neighbor proteins around CP027241_8

CRISPR arrays

The CRISPR arrays of CP027241_8

>merge|CP027241|8|922485-922644|CRISPRCasFinder
TTTTCTTTCTGCGCGGGGCGCAGCCTGACTGAATCAAGGTGCTGCGGGCCTCGGCCGGTTAGTGGTCTGCCTTTTTCCTGCTTGGTTCACCTCTGCCCGGTCGAAAGCTTTTCTTTCTGCGCGGGGTGCAGCCTGACTGAATCAAGGTGCTGCGGGCCTC

>CP027241|8|6|922485-922644|CRISPRCasFinder
TTTTCTTTCTGCGCGGGGCGCAGCCTGACTGAATCAAGGTGCTGCGGGCCTC	GGCCGGTTAGTGGTCTGCCTTTTTCCTGCTTGGTTCACCTCTGCCCGGTCGAAAGC
TTTTCTTTCTGCGCGGGGTGCAGCCTGACTGAATCAAGGTGCTGCGGGCCTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP027241.1|AVM68528.1|909861_911133_-|O-acetylhomoserine-aminocarboxypropyltransferase	unknown	unknown	gnl|CDD|225428
CP027241.1|AVM68534.1|916130_917552_-|cysteine--tRNA-ligase	unknown	unknown	gnl|CDD|234705
CP027241.1|AVM68540.1|928165_928987_-|BtpA-family-membrane-complex-biogenesis-protein	unknown	unknown	gnl|CDD|223511
CP027241.1|AVM68531.1|913044_913830_-|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB	unknown	unknown	gnl|CDD|129290
CP027241.1|AVM68530.1|912247_912874_-|RNA-polymerase-sporulation-sigma-factor-SigH	unknown	unknown	gnl|CDD|181361
CP027241.1|AVM68541.1|929013_929514_-|secondary-thiamine-phosphate-synthase-enzyme	unknown	unknown	gnl|CDD|376651
CP027241.1|AVM68542.1|929428_930583_-|SIS-domain-containing-protein	unknown	unknown	gnl|CDD|223526
CP027241.1|AVM68545.1|932622_933627_-|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM68533.1|915596_916007_-|ribonuclease-III	unknown	unknown	gnl|CDD|224850
CP027241.1|AVM68543.1|930603_931407_-|secondary-thiamine-phosphate-synthase	unknown	unknown	gnl|CDD|376651
CP027241.1|AVM68535.1|918388_919753_-|hypothetical-protein	unknown	unknown	gnl|CDD|276809
CP027241.1|AVM68544.1|931421_932597_-|hypothetical-protein	unknown	unknown	gnl|CDD|223526
CP027241.1|AVM68539.1|926865_928137_-|hypothetical-protein	unknown	unknown	gnl|CDD|340913
CP027241.1|AVM68536.1|920502_922299_+|hypothetical-protein	unknown	unknown	gnl|CDD|273938
CP027241.1|AVM68538.1|925683_926853_-|hypothetical-protein	unknown	unknown	gnl|CDD|223526
CP027241.1|AVM68529.1|911325_912204_-|oxidoreductase	unknown	unknown	gnl|CDD|224995
CP027241.1|AVM70434.1|917542_918250_-|serine-O-acetyltransferase	unknown	unknown	gnl|CDD|200082
CP027241.1|AVM68537.1|922807_923959_-|NAD-dependent-malic-enzyme	unknown	unknown	gnl|CDD|235976
CP027241.1|AVM70435.1|924003_925368_-|class-II-fumarate-hydratase	unknown	unknown	gnl|CDD|234779
CP027241.1|AVM68532.1|913996_915595_-|hypothetical-protein	unknown	unknown	gnl|CDD|240529

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP027241.1|AVM68528.1|909861_911133_-|O-acetylhomoserine-aminocarboxypropyltransferase	gnl|CDD|225428	COG2873, MET17, O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism].	0
CP027241.1|AVM68534.1|916130_917552_-|cysteine--tRNA-ligase	gnl|CDD|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
CP027241.1|AVM68540.1|928165_928987_-|BtpA-family-membrane-complex-biogenesis-protein	gnl|CDD|223511	COG0434, SgcQ, Predicted TIM-barrel enzyme [General function prediction only].	1.32358e-32
CP027241.1|AVM68531.1|913044_913830_-|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB	gnl|CDD|129290	TIGR00186, Uncharacterized_tRNA/rRNA_methyltransferase_MG252, rRNA methylase, putative, group 3. this is part of the trmH (spoU) family of rRNA methylases [Protein synthesis, tRNA and rRNA base modification].	1.5335e-83
CP027241.1|AVM68530.1|912247_912874_-|RNA-polymerase-sporulation-sigma-factor-SigH	gnl|CDD|181361	PRK08295, PRK08295, RNA polymerase sporulation sigma factor SigH.	3.95241e-86
CP027241.1|AVM68541.1|929013_929514_-|secondary-thiamine-phosphate-synthase-enzyme	gnl|CDD|376651	pfam01894, UPF0047, Uncharacterized protein family UPF0047. This family has no known function. The alignment contains a conserved aspartate and histidine that may be functionally important.	4.77003e-23
CP027241.1|AVM68542.1|929428_930583_-|SIS-domain-containing-protein	gnl|CDD|223526	COG0449, GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane].	1.70831e-17
CP027241.1|AVM68533.1|915596_916007_-|ribonuclease-III	gnl|CDD|224850	COG1939, COG1939, Ribonuclease III family protein [Replication, recombination, and repair].	2.66335e-40
CP027241.1|AVM68543.1|930603_931407_-|secondary-thiamine-phosphate-synthase	gnl|CDD|376651	pfam01894, UPF0047, Uncharacterized protein family UPF0047. This family has no known function. The alignment contains a conserved aspartate and histidine that may be functionally important.	1.55732e-46
CP027241.1|AVM68535.1|918388_919753_-|hypothetical-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	4.25215e-06
CP027241.1|AVM68544.1|931421_932597_-|hypothetical-protein	gnl|CDD|223526	COG0449, GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane].	1.43906e-15
CP027241.1|AVM68539.1|926865_928137_-|hypothetical-protein	gnl|CDD|340913	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters. This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.5595e-26
CP027241.1|AVM68536.1|920502_922299_+|hypothetical-protein	gnl|CDD|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	6.29017e-87
CP027241.1|AVM68538.1|925683_926853_-|hypothetical-protein	gnl|CDD|223526	COG0449, GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane].	8.27951e-20
CP027241.1|AVM68529.1|911325_912204_-|oxidoreductase	gnl|CDD|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	5.43313e-105
CP027241.1|AVM70434.1|917542_918250_-|serine-O-acetyltransferase	gnl|CDD|200082	TIGR01172, Serine_acetyltransferase, serine O-acetyltransferase. Cysteine biosynthesis [Amino acid biosynthesis, Serine family].	1.48138e-85
CP027241.1|AVM68537.1|922807_923959_-|NAD-dependent-malic-enzyme	gnl|CDD|235976	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed.	0
CP027241.1|AVM70435.1|924003_925368_-|class-II-fumarate-hydratase	gnl|CDD|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
CP027241.1|AVM68532.1|913996_915595_-|hypothetical-protein	gnl|CDD|240529	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins. The integral membrane protein SpoVB has been implicated in the biosynthesis of the peptidoglycan component of the spore cortex in Bacillus subtilis. This model represents a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	9.5572e-96

Protein sequences

>CP027241.1|AVM68536.1|920502_922299_+|hypothetical-protein
MDNRNQNLNNENLPATPEPIATPETHFTGSSQNMSEASAATGAGAGQIMTDNAQPEIAEAAVTPSTPVFHDHSSAAAAPEIDPIYQDVSAGSYSQSDQEYTVNPQPTQPAQTPQSGSAMGYGQYQANYQEKPSGSPYFSAQPAPAPAGSNPSYQEVKEKRRKRGKGMRFIAACLALALALYGSYSFGSYQAEQRIDAKLTEFQQELKNIQTTQTTAVYQPLPSSQPAETTIAEGTTKEAAVSPAPATSVSPVVAIAERVVPSVVTITSTLAPSRSSGLFSGGQASGSGILYKTEGDNLYLITNHHVIENASLIRVTFSNGESADAEVVGYDSRNDLAVLKVNLSDLNDKNLTMAVFGDSSALKVGQLAVAIGNPLGEGHDHTITAGVISSVNRTLDIENIKNLEVIQTDAAINPGNSGGALVNERAEVIGINTAKYSDVKVEGMGFAIPSNIAMSVVEKILKNGSGDAAYAMSDERPFLGIGYSPINSDIYAKTGVPFGVYVTKVYEGSAAHAAGVKAGDILFSLNGVRIKDANMLFDNIGKLELGQEVKLGLVRGEEIFEVEAVITSFGEVNAKNNGELGNKSQENRSENQNTDQDK
>CP027241.1|AVM68535.1|918388_919753_-|hypothetical-protein
MNRRCFRCGNVLTEDLECRVCHQKYPSYRKAEELSKLYYNLGLERAKTRDLSGAADTLKQSVRLNKYNKDARNLLGLVYFEQGETVLALSEWVLSQNFFPEDNIAGKYLEVIKQNKSTLETVDNTIKKYNQSLEHIRSGSYDLAIINLKKAVSLNPNFIKAYLLLALLFVKTGDTLEAKRELQKVLQIDASHCLARKYYTDLVQKDGEEKILMPEEETQKLKQQNQRQIVLNQSIQQIATLGLGILLGAGLLYFLVWPYQKSLLTDKSEDLKKEIVILQEENNALRQEKETADKEALQKEQQVKAMVKEVQLAAQKTAAADGYITAAGAYLAGDFNAAAEALAAIVPSENALVDTAVAQLKQLVFPKVSQALYISGYAAYSRNQLEKAIEDLTLAMKYDAGVDFSDDVIYFLGRTYEKAGDKAKALEMFKLLLEKYPNTDKKGYAESRIAALSQ
>CP027241.1|AVM70434.1|917542_918250_-|serine-O-acetyltransferase
MSIYKKIKKNIEDEIKVITDRDPAIKSRAEILLYPSLHALLHYRLAHYFYRRRLFFLARLISVWSARRTGIEIHPGARIGKGLFIDHGHGVVIGETAVIGNNVTIYQGVTLGGTGKEWKKRHPTIEDNVMISAGAKILGSFTVGHDSKIGAGAVVLHPVPPYSTVVGIPGRVVKNRVHQAPKDTLNQVDLPDPIRREICKLKLRMRYVEHRAGGLSKEDLDYLYQECCEGDHKCL
>CP027241.1|AVM68534.1|916130_917552_-|cysteine--tRNA-ligase
MLIIYNTLSKKEEVFQPIEPGKVKMYVCGPTVYDLMHIGNARPVVVFDTVHRFLRYSGYDVAFVQNYTDIDDKIIARANQAGVSSAEYAESMIAEMEKDYAGLSTLPMIHPRATEEIGGIIRMITELIEKGYAYEQGGSVFFMPQKFDEYGKLSGKKLEELEAGSRVEVDEQKRSPFDFVLWKPKKEGEPYWSSPWSDGRPGWHIECSEMARRYLGETIDIHAGGVDLIFPHHENEIAQSECASGREFARYFMHNGFINVDNKKMSKSEGNFFTVRQIAAEYPYSVIRFLLLSAHYRKPLNFSRQLMEAAVQSLTRLSNAYNRLKELTSGEMPQGSENSDFSAFPELNQIKQDFIRAMEADFNTPDAITAFFELSRLSNTAVSEETPAPEKLAYLRLFAEFGFVLGLDLQAEKVLLDAEIQQKIEERQNARKAKDFAKADQIRQELLQQGIVLEDTREGVKYKRIRAGEKDRD
>CP027241.1|AVM68533.1|915596_916007_-|ribonuclease-III
MDIFADFLARLQIVPKDIKTYSPLSLAYLGDNIFDLFLRYMVVAEGNAQAHRYHERVTAYVKAGGQAAFYEKIKAELTEEEQTIFKRGRNAKTLHVPKHSSPEEYAVATGVETLLGYLFLKGEMERLSVLMAKGVS
>CP027241.1|AVM68532.1|913996_915595_-|hypothetical-protein
MTKQTKRLITGTMILSFSGLFVKLINILYKLPLTNLVGIKTMGYFNTVYSIYLVLTAALLTGIPATISKLVAEEREAGNYRRAHQVFQTGFWLAAALGLVVSIAFVFLPAWAGAFAWEPETRYVLWGLALSPFLIGISGAIRGYFQGMQNMLPTAVSQIIENTGKAAIGVGLVSFLMKRGQPDYISVSGAAVGISVSFVAVTLYLLRQYQRQRPNFSQKADSGAAAGQGSAALLRKMVWIAAPITISSAMISIMGFIDSSTIYHLFAALGDSAENARMALSSVTTAQTVINVPLAVSAALAVSILPAVAVAGVRRDQAEMNDKINMGLQLVMKMGLPAMVGIFLLAEPILRLLYYKERIPGGLLQLYSICMLVMILAQSVSSILQGLSGYYKTLLAVLAAAVFKLAGNIVFLKAGLGAAALIWASILYFMVILGMNAFFLKKETGLNLNYGLILWRPLAASAGMGAVARLVYTAVMAVCAKNAAAVLLAVAAAVPVYSLLMLKLRGFTAEEILILPRGGRILKYLQSRGWVE
>CP027241.1|AVM68531.1|913044_913830_-|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB
MGKSYNKNGKNSKRPYVSPRDGSLWLGGYHAAAEKLKAGGEVRELLLQAGSRNEELEALAAAAGVPVRYLEKEELDRYCPEKHQGVVAIAGAYQYARLDDILAAAAQKGEPPFVILLDQITDPHNLGAIIRTAHQAGCHGVIVPERRSAPLTETVAKTSAGAIEYLPVAQVTNINQTIDYLKKQGLWIAGADMDGQIMYQADLKGALGLVIGSEGDGLSRLTREKCDFIVSVPMFGRIDSLNASVSAGVLIYEAVRQRRGF
>CP027241.1|AVM68530.1|912247_912874_-|RNA-polymerase-sporulation-sigma-factor-SigH
MKDYSNLTDEEILNLISSGDNEAMDYLFSRYKPLVEKKSRSYFINGGSREDLTQEGMIGLFKAIRDFQAQKNIAFFPFAELCITRQIITAVKRSARKKHGPLNNYISLNKPAFDFEEEESDEDMLVYVPAGRLEDPENLIIGQEESARIKEELLGKLSELEKQVLQLHLNGVNYKEVAGILQRPVKSIDNALQRIKKKAEEVVRSEWN
>CP027241.1|AVM68529.1|911325_912204_-|oxidoreductase
MKRIAFIGTGIMGKSMLRNLRKAGYEVGMYVRHREKAADLIAEGVPCYDSIRDCVKEAEAVITIVGYPADVEEVYFGPAGILANVKPGTYVIDMTTSSPKLAEKIYAQAKELGVHALDAPVTGGDTGAREGMLSILAGGDRADFDECYPLFAAMGSNINYQGTAGKGQHTKMVNQIIIAGTISGVCEALSYACAKDLDLPTVLRSIGSGAAGSRQLESLAPRILAGDFAPGFFIKHFIKDMKLAREEAAAAGLDLSVLELVLQHYEGMAAEGMGDLGTQALFRYYHDNQEQK
>CP027241.1|AVM68528.1|909861_911133_-|O-acetylhomoserine-aminocarboxypropyltransferase
MKQGQQTMALHAGYTPGNGEPRVLPIYQSTTYTYDSTEHIGKLFDLTASGHMYSRLSNPTVEAVEKKIAALESGAAALCTSSGQAATLLSLLNILKAGDHFISSTSIYGGTVNLFAVRLKQFGIECSFVDSTASAEELKAAFRPNTKAVFAETLANPALIILDIEKWAGVAHEMGVPLIMDNTLATPALCRPIEHGADIVVHSTTKYMDGHAVAVGGVIVDSGNFDWKNGKFPELTEADPSYHGLSYTESFGRQAYIVKARVQLMRDFGVYPPALTAFILNLGLETLVLRMKAHSDNALAVAKLLAASDQIAKVAYPGLETDFSHALQQKYMPAGASGVVSFDMAGGRAAAVRFIDSLELVSNEVHVADIRSCILHPASSTHRQLTPEQLTAAGISEGTVRFSVGIENIEDILADVKNALTKL
>CP027241.1|AVM68537.1|922807_923959_-|NAD-dependent-malic-enzyme
MDFKAESLKLHEQHRGKVAIQPKVKVKTREDLSAAYTPGVAEPCLRIAENRADAYKYTAKGNLVAVVTDGTAVLGLGDIGPEAAMPVMEGKAILFKEFGNVDAFPICLATKDTEEIIQTVKNIAPGFGGINLEDISAPRCFEIESRLKKELDIPVFHDDQHGTAIALCAALLNASRFTGRPLATMKMVISGAGAAGIAIAKLLLRFGVEDIILLDRKGALVRSDNSLTAAKKEIAGLTNPRLETGSLADVIQGKDVFIGVSAPNILTAEMVRSMAPAPMIFAMSNPVPEIMPEEARRGGAAIIATGRSDYPNQINNVLVFPGIFRGALDAGAKEITEEMKMAAAEALAGLIQSQELTAEYLIPDPFDGRVAPAVAAAVKQAVK
>CP027241.1|AVM70435.1|924003_925368_-|class-II-fumarate-hydratase
MTYRIEKDSIGEIAVPAEHYWGAQTERSRQFFAIGREKMPDEVIRALASIKAAAAEVNCELGRLSAERAQKITQVCAEILAGQWPEEFPLSVWQTGSGTQTNMNVNEVIAGRGNELAGERLLHPNDHVNMAQSSNDVFPSAMHIAAATSVQTELLPALEELVATFSRLEAENAGIVKSGRTHLQDATPIAFAQEISAWRVMLERSRDMILAAQDGLLELALGGTAVGTGLNAPAGFAAAAIGKIAQKTGLPFREAGNKFHALTSKDALVFSHGALKALAADLMKIANDIRWLASGPRCGLGEIQIPENEPGSSIMPGKVNPTQAEALTMIAVQVLANDTAIGLAAAQGNFQLNVFMPVCIYNYLQSVRLLGDGIRSFDRNCAAGIKANRRKMEDNLNRSLMTAAALNPYIGYDKAAQAVKKAYRENLSLKQACAELGFLTAEEFDRIYRPQDMV
>CP027241.1|AVM68538.1|925683_926853_-|hypothetical-protein
MKGMERDNNVKTGLKDYPEFVQGLMDKLTDDVMSRIIPDEILKNIRHVVVTGNGDSYAASLATKEIGSRMFLEADYQVLRCIDVSRHHVFSPEHPEQTLVVVISVSGGGSRVIEAMKRAAAKGCITLAITGNPKSGLAQEAGHVLQIEIPKGTGFSPVFQTRTYVAAVCTTLLMALHAGQIRGTITAERADEIRKEAVGYVSAVCNDNILTQVDCQMFELAQTWRNYLGFGFVGGGSDFATAYFATAKFFELCGSLNCLNDSEDWCHIDYFQTKRDQLGTIAVAFRECASFSRTVETIASMQKSNRNVLVVTDAEPETFYPGVTVCRIPGAKDDFVNPLANFIPLFMLGNYIAIGRNYEYFGGMDASNPLFSQEGGINTIKTSKIEYVD
>CP027241.1|AVM68539.1|926865_928137_-|hypothetical-protein
MKNEKTKMHYAWKIVIACILMKLGTGGACAAAVGNFITPIVQDLGCKVSQLTMFTSIQAISMALLYTTAARMITTKKVGLVIGISSVLEVIGLALMGTYQTVQMFYFSGAMIGIAQAFTGFVSIPILLNMWFRKKNGTVLGVVTAVGTAATILYTLLSAKLITDLGWRNAYFIMAAMSAVITIPAVFALIRSPKEMGCEPYGASEKEDTQEEVSAAASTHSLTKKQAFQLPLLYIAWTACVLYSYACGVSGYATNFATIELKQSINFGAAVGVFSNLGGTLSSVIVGKINDRRGVKAGLLWGGITTALGYLTMFLSFQNPIFVYPAMFIVGLGNSMYMVQCPLLARNIVGSGHYSEIWSLMMMVNSLIGGGLYASIGLFYDKFGSYRGAFIMGIVLYAVAGVLGAISINQNRKLQARFQNADI
>CP027241.1|AVM68540.1|928165_928987_-|BtpA-family-membrane-complex-biogenesis-protein
MSTCFDNLNGKKLVIGLVHLLPMVSTPLYQEGFLDKMTKKAISDCLALKENGADGGLIQTVDVFYPSGDDTDYARVAGLAAVTARVRDAVGPNFIIGAQIMMNCITPSLAVCKAAGADFTRCSALVGRVETLYGIMEGQPLKVAEYRKKIDAMNIGMLSEISGYHHVGEYSSTEIQNLAQTSMRMGADAIEVCDRDFARNERLVQDVKAAGNFPVILGGATSADNCKERLCYADGALVGTAFEGGKWGGPIIGSIVAEYVRNVRELEEELNKA
>CP027241.1|AVM68541.1|929013_929514_-|secondary-thiamine-phosphate-synthase-enzyme
MVSLSSEAVEFGQSRETIPFVPAKLRLFKGEMGMYTEKMIQTQKGSLLEITESVKQIVAESGVKHGVAVVSAPTVDAGILCTSFYDKKGHEDIMDDFNRIWPARLDYAGTDDPWQAAAQSKAAVAGQTMDFIVADGELKLGDSQGIFFAEYCGGQQRRYTVMVFGV
>CP027241.1|AVM68542.1|929428_930583_-|SIS-domain-containing-protein
MEKIAFDNPLRQQCLSLPALARPQVEGARLGLAQAIPDKVMKKIRRVIITGCGDSYVAALASIPAFRKFAGRFGSDFSYARAIDVTRFMDFSKFSGENTLVIGVSCSGGPARVQEALRRANHYGCVSLALTNNPDSPAAQEAAYTFCVHTPDFPNANPGLRNYFGSLTGLYLLAARLGELAGCSVQDADSNMGKAIVDNAMSWGDEMERIDQQMFSLAQTWKDFRRFDYIGDDIQFASAFFMAAKVVETAGYMAAADDSENWCHAGFFQKNPGSIGTVVVADKKANDRSRIGETLLQAAGIKRPLLLISDGNLSDFGNAQGVTLCQVPQAPEEYNFLLAMMNYVPGAILAGYLSTLNGESFFRGGGIWSEPGNNTIRSSKIKVV
>CP027241.1|AVM68543.1|930603_931407_-|secondary-thiamine-phosphate-synthase
MLYEKKINTEFRACMSITADVNDILEESGVQEGFCVISVPHTTAGLAITSFWDPRGLADLMDEIDRNIPTRVSYKHQDSPYDASGHVKSALMGSSATLIIHGGKLVLGSSQGLVFVEFDGPRPRKFLVEIIEKPMCIEKENIQTVYMGMHDITKGVCDVIARSGVKDGICHISMLHSTAGLLLAPRNPQAAKDIMTDIERMVPTRVDFKHRETASDAGGHVKTALTDSQLTLTIQDGQLMLGEEQAVVFAEYDGPRPRNYFVAVYTD
>CP027241.1|AVM68544.1|931421_932597_-|hypothetical-protein
MKNIQCDNPIRRQVFNLPNIVEAQLEACFGSGLRELMTMAEIFDVRKIILTGCGDSYAAAIAMAPVVEKYCDCFGVQVMRAIDFTRFLSKNEIGIGEPNSPLVIAISAGGSTARICEALKKANEVGAFSILMTNNSESRAAMLAKRVYCLNILGISDKGSDVQSYFASLIGLLSFANRFGHVRGTLPPMASSAFQAAVRDYVMSFAKSLDTIDAQMYELAQRWKDFERFDFIGDDAELSSALFGAAKFLEANGCCVSVDDSEDWCHINYFLKEPDTVGTIVIADRNSPAYDRERETIRSAVAIGRPVLVVTNGDPEDFVSKAIVCQIPETPDGYEWLLPLMDYIPLSLLAGYVAELQTETSSRFQKTPDLNGNFCEQSLMTIDSSKIEIFD
>CP027241.1|AVM68545.1|932622_933627_-|hypothetical-protein
MTHYFSTPIAIFLTLLAASMWGSWMQVIKLKKDYPIIGIAFMLYMFSFVLVWGVTLLLAPVLLPEGLFTAIGQQTDVMWEIMLGGGMMSIGMVISLTIMNNLGLMLTTTLSGTVTSIMGLMTSISKEGLPDTPQALPLIVTTTIIFIVASYVCSKASQMCALDQAAITGQRKENSKNKVGWKVIFWLLIDCLLMNGWVSGTATGTAANLPPILTCAFMATGSALSVLVLGIIFFTWKKQWKTVLCIGSSKRPLFMSAVSALCHYGGNILSIYSMPAISATLSFLFGKTSTIWTYFWGFYYREFKNAQKRTMITLIMGLGLYFIGLILLFFYNYG

Crispr_ID: CP027241_9

• CRISPR_ID: CP027241_9
• CRISPR_location: 1557863-1557970
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP027241_9

Consensus_repeat	Method
AAACTCGAAATAAAAAGGCGGAAATCCACCT	CRISPRCasFinder

spacers of CP027241_9

>9.1|1557894|46|CP027241|CRISPRCasFinder
GATTTTTTTATCTATTCTTGATTCGTTTATCGATTTATGATAAAAT

CRISPR arrays and Neighbor proteins around CP027241_9

CRISPR arrays

The CRISPR arrays of CP027241_9

>merge|CP027241|9|1557863-1557970|CRISPRCasFinder
AAACTCGAAATAAAAAGGCGGAAATCCACCTGATTTTTTTATCTATTCTTGATTCGTTTATCGATTTATGATAAAATAAACTCGAAATAAAAAGGTGGAAATCCACCT

>CP027241|9|7|1557863-1557970|CRISPRCasFinder
AAACTCGAAATAAAAAGGCGGAAATCCACCT	GATTTTTTTATCTATTCTTGATTCGTTTATCGATTTATGATAAAAT
AAACTCGAAATAAAAAGGTGGAAATCCACCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP027241.1|AVM69021.1|1555322_1555925_+|non-canonical-purine-NTP-pyrophosphatase	unknown	unknown	gnl|CDD|376602
CP027241.1|AVM70474.1|1556594_1557059_+|heptaprenyl-diphosphate-synthase	unknown	unknown	gnl|CDD|377839
CP027241.1|AVM69024.1|1560662_1561520_-|hypothetical-protein	unknown	unknown	gnl|CDD|119397
CP027241.1|AVM69025.1|1561548_1561758_+|transcriptional-regulator	unknown	unknown	gnl|CDD|238045
CP027241.1|AVM69031.1|1566078_1566342_+|AbrB-family-transcriptional-regulator	unknown	unknown	gnl|CDD|198034
CP027241.1|AVM69020.1|1555068_1555320_+|HPr-family-phosphocarrier-protein	unknown	unknown	gnl|CDD|376329
CP027241.1|AVM69026.1|1561777_1561987_+|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM69027.1|1561983_1562445_+|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM69018.1|1553045_1554008_+|hypothetical-protein	unknown	unknown	gnl|CDD|376670
CP027241.1|AVM69030.1|1565870_1566089_+|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM69016.1|1551211_1552021_+|peptidylprolyl-isomerase	unknown	unknown	gnl|CDD|234605
CP027241.1|AVM69017.1|1552143_1553037_+|UDP-N-acetylenolpyruvoylglucosamine-reductase	unknown	unknown	gnl|CDD|237553
CP027241.1|AVM69014.1|1548994_1549882_+|TIGR00159-family-protein	unknown	unknown	gnl|CDD|224539
CP027241.1|AVM69019.1|1554101_1555100_+|DNA-binding-protein-WhiA	unknown	unknown	gnl|CDD|224398
CP027241.1|AVM69023.1|1557994_1559290_+|ATPase	unknown	unknown	gnl|CDD|224292
CP027241.1|AVM69029.1|1565427_1565643_+|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM70475.1|1562478_1564428_+|integrase	unknown	unknown	gnl|CDD|366234
CP027241.1|AVM69022.1|1556212_1556578_+|hypothetical-protein	unknown	unknown	gnl|CDD|377759
CP027241.1|AVM69028.1|1564501_1565416_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|379165
CP027241.1|AVM69015.1|1549847_1551113_+|hypothetical-protein	unknown	unknown	gnl|CDD|227193

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP027241.1|AVM69021.1|1555322_1555925_+|non-canonical-purine-NTP-pyrophosphatase	gnl|CDD|376602	pfam01725, Ham1p_like, Ham1 family. This family consists of the HAM1 protein and hypothetical archaeal bacterial and C. elegans proteins. HAM1 controls 6-N-hydroxylaminopurine (HAP) sensitivity and mutagenesis in S. cerevisiae. The HAM1 protein protects the cell from HAP, either on the level of deoxynucleoside triphosphate or the DNA level by a yet unidentified set of reactions.	1.5285e-90
CP027241.1|AVM70474.1|1556594_1557059_+|heptaprenyl-diphosphate-synthase	gnl|CDD|377839	pfam07456, Hpre_diP_synt_I, Heptaprenyl diphosphate synthase component I. This family contains component I of bacterial heptaprenyl diphosphate synthase (EC:2.5.1.30) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7.	5.28603e-30
CP027241.1|AVM69024.1|1560662_1561520_-|hypothetical-protein	gnl|CDD|119397	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell. This family includes: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (EC 3.4.21.88), the repressor of genes in the cellular SOS response to DNA damage; MucA and the related UmuD proteins, which are lesion-bypass DNA polymerases, induced in response to mitogenic DNA damage; RulA, a component of the rulAB locus that confers resistance to UV, and RuvA, which is a component of the RuvABC resolvasome that catalyzes the resolution of Holliday junctions that arise during genetic recombination and DNA repair. The LexA-like proteins contain two-domains: an N-terminal DNA binding domain and a C-terminal domain (CTD) that provides LexA dimerization as well as cleavage activity. They undergo autolysis, cleaving at an Ala-Gly or a Cys-Gly bond, separating the DNA-binding domain from the rest of the protein. In the presence of single-stranded DNA, the LexA, UmuD and MucA proteins interact with RecA, activating self cleavage, thus either derepressing transcription in the case of LexA or activating the lesion-bypass polymerase in the case of UmuD and MucA. The LexA proteins are serine proteases that carry out catalysis using a serine/lysine dyad instead of the prototypical serine/histidine/aspartic acid triad found in most serine proteases. LexA sequence homologs are found in almost all of the bacterial genomes sequenced to date, covering a large number of phyla, suggesting both, an ancient origin and a widespread distribution of lexA and the SOS response.	3.29819e-14
CP027241.1|AVM69025.1|1561548_1561758_+|transcriptional-regulator	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	0.000279866
CP027241.1|AVM69031.1|1566078_1566342_+|AbrB-family-transcriptional-regulator	gnl|CDD|198034	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain. This domain is found in AbrB from Bacillus subtilis. The product of the abrB gene is an ambiactive repressor and activator of the transcription of genes expressed during the transition state between vegetative growth and the onset of stationary phase and sporulation. AbrB is thought to interact directly with the transcription initiation regions of genes under its control. AbrB contains a helix-turn-helix structure, but this domain ends before the helix-turn-helix begins. The product of the B. subtilis gene spoVT is another member of this family and is also a transcriptional regulator. DNA-binding activity in this AbrB homologue requires hexamerisation. Another family member has been isolated from the Sulfolobus solfataricus and has been identified as a homologue of bacterial repressor-like proteins. The Escherichia coli family member SohA or Prl1F appears to be bifunctional and is able to regulate its own expression as well as relieve the export block imposed by high-level synthesis of beta-galactosidase hybrid proteins.	0.00141275
CP027241.1|AVM69020.1|1555068_1555320_+|HPr-family-phosphocarrier-protein	gnl|CDD|376329	pfam00381, PTS-HPr, PTS HPr component phosphorylation site.	2.04005e-23
CP027241.1|AVM69018.1|1553045_1554008_+|hypothetical-protein	gnl|CDD|376670	pfam01933, UPF0052, Uncharacterized protein family UPF0052.	1.72642e-128
CP027241.1|AVM69016.1|1551211_1552021_+|peptidylprolyl-isomerase	gnl|CDD|234605	PRK00059, prsA, peptidylprolyl isomerase; Provisional.	1.94653e-34
CP027241.1|AVM69017.1|1552143_1553037_+|UDP-N-acetylenolpyruvoylglucosamine-reductase	gnl|CDD|237553	PRK13905, murB, UDP-N-acetylmuramate dehydrogenase.	1.71117e-151
CP027241.1|AVM69014.1|1548994_1549882_+|TIGR00159-family-protein	gnl|CDD|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	6.54425e-78
CP027241.1|AVM69019.1|1554101_1555100_+|DNA-binding-protein-WhiA	gnl|CDD|224398	COG1481, COG1481, Uncharacterized protein conserved in bacteria [Function unknown].	1.68131e-79
CP027241.1|AVM69023.1|1557994_1559290_+|ATPase	gnl|CDD|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	2.19968e-58
CP027241.1|AVM70475.1|1562478_1564428_+|integrase	gnl|CDD|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	2.74262e-10
CP027241.1|AVM69022.1|1556212_1556578_+|hypothetical-protein	gnl|CDD|377759	pfam07009, NusG_II, NusG domain II. This domain is found in some NusG proteins where it forms domain II. However most NusG proteins are missing this domain. In other cases this domain is found in isolation. The function of this domain is unknown.	2.94367e-31
CP027241.1|AVM69028.1|1564501_1565416_+|AAA-family-ATPase	gnl|CDD|379165	pfam13401, AAA_22, AAA domain.	9.01355e-13
CP027241.1|AVM69015.1|1549847_1551113_+|hypothetical-protein	gnl|CDD|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	2.44648e-21

Protein sequences

>CP027241.1|AVM70474.1|1556594_1557059_+|heptaprenyl-diphosphate-synthase
MALFVALAMIFSYLEFLLPLPVPFPGIKLGLANLAIVVPLYLWGLFPALAISLLRIALVGITFGSLATILYSLFGALLSLAVMAGLKKWNVFSVTGVSMAGGVCHNIGQLAAAALIVENIRLFYYLPVLLAAGALTGFAIGAVSAQVLKRLPTL
>CP027241.1|AVM69022.1|1556212_1556578_+|hypothetical-protein
MKIRKKDILLLLVLLGLAGIGMGLLQLRPAADRVVVKQDGKVIGSYLLAQDREILLDNDWGRNKIRIKGGQVSVTEADCPDQICVRHRPVSRDQETIVCLPHRLVVEVIRAGGKGVDMIAD
>CP027241.1|AVM69021.1|1555322_1555925_+|non-canonical-purine-NTP-pyrophosphatase
MSNSIIFATRNQKKVEELNAILAGSGLNIISMEAAGIYTDVKEDGHSFEENAIKKASTISRLTGATVLADDSGLEVDYLNGAPGIHSARFGGRDTSYIVKNKLILDCLKDAEGSERKARFVCVIALCFPNGETEVRRGVMEGYIADRQMGKNGFGYDPIFFLPEYGQTSAQLPPEVKNQISHRAQALNEMKEFLLTIYNC
>CP027241.1|AVM69020.1|1555068_1555320_+|HPr-family-phosphocarrier-protein
MTKKTIEIKIDLEARQVALFVQMANQFSSKVYMQLKNLKVNAKSIMGMMSVGAIVGDRLELSADGADEAEAIPALESFLLGRE
>CP027241.1|AVM69019.1|1554101_1555100_+|DNA-binding-protein-WhiA
MHPLFERDRAKKDYRKVEVILKMSFSGQVKRELAALGKMPRHCALAELTGFLYFGADSRSGQIRFRTENLAAAGRVGELTERLLRFRPEVRLRLSRHGRRIYDSYVIRQHRLLLDICGYQPQPVFTFKQACCKRAFLRGAFLAAGSVSSPEKTYHLEFMTKNTMLAEQLIVLMREFEIDAKIIRRKNLPVVYLKEGEQIVRLLNVMSAHSALMELENLRIVKDMRNSVNRIVNCETANLNKTAQAAWQQQAAINLIEETVGLDFLNESLQEIAILRKANMEASLKELGEMLSPPIGRSGVNHRLQRIMEIAEDIKERRENLKHDEEDDRDQN
>CP027241.1|AVM69018.1|1553045_1554008_+|hypothetical-protein
MKRTKDERRIVCVGGGTGLSTLLRGLKLYAADITAIVTVADNGGSSGQLRREMGILPPGDIRNCVLALAEIEPLMEKVYQYRFSEGSLKGQNLGNLIIAALTDISGGSFEKAVEQLSDILAVKGKVLPVTDEKIELMATYSDGTRIFGEEEIVYQNKVSRKKIQTIEMLPKPPQANRKAVRALEDAELIVLGPGSLYTSIIPNLLVKGIPEAIRGSKAKVIYIGNLMTQPGETDFFALSDHVGAIERILGKNVIDVIAIDGNSQLPENLSFYEADDSYPVRNDLQDSTEYKVVSGNLCVADGDYIRHDPKNLAKFVLGIT
>CP027241.1|AVM69017.1|1552143_1553037_+|UDP-N-acetylenolpyruvoylglucosamine-reductase
MTVSRQTAAPQILKNQTLKEYTTFRIGGPADFWAEPKTPAELRALLEICRERSLPYFILGQGSNVLFTDKGYRGMVIFLGQHFGRISREEETIRVGAGVRLKDAAQYALAEGLDGLVFACGIPGSIGGAVFMNAGAYDGEMKQVVAEVTVMDRQGNIHCYSGEEMDFGYRRSRIQESGEIILEALLQLKPGDRQAMAEKTAELTRRREEKQPLELASAGSTFKRPEGYFAGKLIMDAGLAGYTCGDAAVSTKHCGFVVNRGNASFADVMNVIGHVQKTVEEKFGVRLQPEVRIVGER
>CP027241.1|AVM69016.1|1551211_1552021_+|peptidylprolyl-isomerase
MAAAERATEKRNGREEKMEENILATVGDREITRDMMLNIMRSMPQEERDFVAGEAGRKLLLDEMIAAELLYLDAAAHHWEEEKDFMKLLAEAKKGLMQRYAVGKLFDTIQISDDEIKAYYDAHSAEFKQEEKMSAKHILVDSLEAAEKISAEIKAGKAFEDAAREYSSCPSKSRGGDLGTFSRGKMVKEFEDAAFALTQGMVSAPVKTQFGYHLIKAGEMTPAEAADLEAVKDQIRKRLFQAKQKEVYAKRLEELKESYPVQINLAALK
>CP027241.1|AVM69015.1|1549847_1551113_+|hypothetical-protein
MEKMTIKRLTNNLGWKILSLFLACLLWLAVINIEDPQVTTTIRGIAVEKQNEDAITSQKQAIQYVAGNTVDVKVKGRRSVVYKLTSNNVKAYVDMRNLSITDAVDIQIELPNDVELISKTPSSVSVYREKIIVKQIEVQYQKSGEVKAGFVDLNPTITPNVIELEAAESTIYKIEKVVAPVNIDGISGDFTISVTPQIYDYAGSLVTDVDMSVQQVQVKVPVEKTKILPVSFTPADAVGENYAYLGVTLSQTSVAVRGKPALIDDLQELSIDYISIAGMTEKQTVTVNLAKLLPDGVSLNQDNSTLDAEIEIEPIVTQEFSFAPTEVEVRSLPENKEWLVLSENPVKVRYRGIESKIKLLTKDSLQPHISVEGLSNGIHAVMVQWQDPDELERISADDRLTVEIFDKEAEKTVETSPANNR
>CP027241.1|AVM69014.1|1548994_1549882_+|TIGR00159-family-protein
MRNWVEIWTNLKTILSQLPSIQVKDGIEILIIAYLIYQIMQWFWGTKAWTLFKGILILLAIFAFASLMEFNTILWIFANTINVGIIAVFIVFQPELRRALEQLGRSNFFGKLLNLEEVRRTGDDLNEEQINDIVQAAEEMGKVKTGALIVLEQTESLSEYIRSGIPLDAVVSKELLINIFEHNTPLHDGAVIVRGGRIAAATCYLPLSDNLSISKELGTRHRAGLGLSEAADAMVIIVSEETGKISMAVGGNLVRSVDSQYLKNKLIGLFGKKPEEKKYFLWKGFGKNDDKKANQ
>CP027241.1|AVM69023.1|1557994_1559290_+|ATPase
MIIKRDYYLKKIIDKRENGRIKIITGIRRCGKSYLLFNLYQEYLLSKGVKENQIISIALDEIDNLEYRNPFRLNEYIKEKTKNRDQIYYIFIDEIQLSVAVSNPYIDSKEENVTFVDVLLGLMKHSNLDIYVTGSNSKMLSSDVLTQFRDRGDEIHVNPLSFAEAYDLYEKKEQAFENYTVYGGMPYIYSLKSDEEKNQYLKDLFRETYIKDILERNNIQNEKEVLELLLDFTSSAIGSLTNPTKLSRRFLSEKQIKISSNTISKYLSFFEEAYVIYHANRYDVKGSRYFSTPLKYYFADVGLRNARLNFRQVEDTHIMENIIYNDLLRRGYNIDVGVVEHDFKKDGNRRKVQLEVDFVINKGHQRYYIQSALNVDSTEKREQETASLKKIDDSFKKIVIVRKQIIPRHDNAGILYIGVEDFLLNESIIDL
>CP027241.1|AVM69024.1|1560662_1561520_-|hypothetical-protein
MIYYKKHFFSFIGNIYCRIYIIIRFFVFVNRIVRYFLFQEVCVDYQNDLILERILETLKNKGITEKELLTALKINTSFLTDWKKGRLKSPSVDKIILIANYLNLSLDWLASGKYSASYNLEELKILSDYKMISAENKEAVQTLLDLFVKQASKSEIIKEETRDVEYYLNAVSAGTGQLLFDDSAADTLSIPDIIEYKKVDYAVRVSGSSMEPKFSNNDILLVQSSSSVDLGEIGIFCVDDEVFVKKLGKNELISLNPEFDNIPLNENSRCLGRIIDSLKPNFFKS
>CP027241.1|AVM69025.1|1561548_1561758_+|transcriptional-regulator
MKNNKTTFYGKKVKQRLIELDMTQRELAQKVKMNENYITQILTGRKGGYKYRQRINEILWPAEELESVI
>CP027241.1|AVM69026.1|1561777_1561987_+|hypothetical-protein
MKKEEILKEIKELKEIKEMLEMDVEEWAKIYGEKFGHKIEEKDVYPYRTGVAISTLNYILEKHSIRGSK
>CP027241.1|AVM69027.1|1561983_1562445_+|hypothetical-protein
MNEIVESLNDIKQLLNDIKTLLEEQRPTTKKESAVKKGALDALFRAYTEDETLLQSLFDFADMRKKARSPLTVRAAEMQLRKLDEIAKTTKDKIVLVEQSTMNGWKSIYPLSEKFKSAGTVKQTTFNNYQQREEDYAEIERKIMEQRIKRREV
>CP027241.1|AVM70475.1|1562478_1564428_+|integrase
MDCSVRTVRRKIAEHSLIAMEQKNKKNGQTEYLIRLEDLPENVQRKYLKQEELFLPEAKDSAHYGKGLKEEKKSFSDFNEREREEIREWIEILKQWQTERALYHNKTEADKNIIAAINAELFRRGSNLTVSSSVLYRKFFFYRNGDYEGLLDKRGGWNKGNSSMPAEVWDAFLFYYLDERQPALAKVYKDTFQWTKEFYPHFLEVMPSERTFRRKLEKEVPLAVQTYLRQGAKALDDECLPYIERAYDELQVNDVWVTDNHTLDIISTYDNGKKDNHRMYLTAFWDAKSGILTGWNITNDPSINSTLFALRHGIKRCGVPKVIYADNGSEFMSYDFGGRGKRSQKPENEIEYALTILGRMGIEIRTAKVKNARAKPVERFFLSFKEHISKLFSTYTGGNITERPESLKSQLKKGNIPTDSKLRDDLALLIEKENCEPYGGAEKRKYQGMTKIEVFNEGLKHIKQVLMTEDDLDLFLLRGKKQKVGRKGVFVEIAKEKIYFMAADSWLHFGREVLVRYDPTDLSSVRIYDMEDRYMATWEVERTLLLNFLESDTDRLAEANEKLASVRKSVKQYAKDMFANMRSDTKIDILDLQIRKAHRLTEGTLIEQSNLVEVRRFEEKQLCQATGTEAAVVIDIDRMNRNGERRKGR
>CP027241.1|AVM69028.1|1564501_1565416_+|AAA-family-ATPase
MEREQKEHLLKEFDKLAQKVGSQAKACRLVGISPSIMTPLRKGEYGGAEEKQYEILANYFQIKEEAKAGRQAETYVPTSISESVYAYIRNAQIKGGLLAISGAAGIGKTRAIRKYAAESQGTCLWITANPCLNTVKPILKKLCKELNIANVRTNDDMYMAILEKLRDGMVLVFDEAQHLSLKVIETLRGFSDYFLDRNMTLGIVFVGNSTTITRFGGRQDAVFEQIANRTIQKPVFQTSDIRKKDIQMLYPELTDEKSIDFMLKIAQSREAIRGANNLFSNAYDNENISYEGLVSMAKHMHMMI
>CP027241.1|AVM69029.1|1565427_1565643_+|hypothetical-protein
MNFIYGKNCTLGYEDEYGNHQEQELKNGEKYKITLEAEAEYVEFKGDDLIFEVAGIEVSIPMTQITKIEEK
>CP027241.1|AVM69030.1|1565870_1566089_+|hypothetical-protein
MKLNRKKYQEIKKMDHAQMDRYLESVRAEGERKARAAYQEALEGVPGIGQIRREGVIQKAEQILKGEEKNDE
>CP027241.1|AVM69031.1|1566078_1566342_+|AbrB-family-transcriptional-regulator
MMNEKKISKTGSITIPGHLRRELGLTAGEKVKIEKDEAGNFFIQRIEGSCIFCGTNEDLTKVRGKFICAGCAEEVIKTKEKGENHEK

Crispr_ID: CP027241_10

• CRISPR_ID: CP027241_10
• CRISPR_location: 1898108-1898363
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of CP027241_10

Consensus_repeat	Method
TGTATGAACTAACAAATCCCCGCAAGGGGACGGAAAC	PILER-CR
GTATGAACTAACAAATCCCCGCAAGGGGACGGAAAC	CRISPRCasFinder

spacers of CP027241_10

>10.1|1898145|35|CP027241|PILER-CR
TATGTTACATACCCATGCAAAACTAAGAAATTTCG
>10.2|1898217|38|CP027241|PILER-CR
CATATACTCTTCTTTCTTATCAATTGAAATCTTAATAT
>10.3|1898144|36|CP027241|CRISPRCasFinder
TATGTTACATACCCATGCAAAACTAAGAAATTTCGT
>10.4|1898216|39|CP027241|CRISPRCasFinder
CATATACTCTTCTTTCTTATCAATTGAAATCTTAATATT
>10.5|1898291|37|CP027241|CRISPRCasFinder
GACTTCTATCATCTCAAGAACCGTGAACAGATCCTTC

CRISPR arrays and Neighbor proteins around CP027241_10

CRISPR arrays

The CRISPR arrays of CP027241_10

>merge|CP027241|10|1898108-1898363|PILER-CR,CRISPRCasFinder
GTATGAACTAACAAATCCCCGCAAGGGGACGGAAACTATGTTACATACCCATGCAAAACTAAGAAATTTCGTGTATGAACTAACAAATCCCCGCAAGGGGACGGAAACCATATACTCTTCTTTCTTATCAATTGAAATCTTAATATTGTATGAACTAACTAATCCCCGCGAGGGGACGGAAACGACTTCTATCATCTCAAGAACCGTGAACAGATCCTTCGTATGAATTAATAAATCCCCGCGAGGGGACGATTTC

>CP027241|10|3|1898108-1898290|PILER-CR
GTATGAACTAACAAATCCCCGCAAGGGGACGGAAACT	ATGTTACATACCCATGCAAAACTAAGAAATTTCGT
GTATGAACTAACAAATCCCCGCAAGGGGACGGAAACC	ATATACTCTTCTTTCTTATCAATTGAAATCTTAATATT
GTATGAACTAACTAATCCCCGCGAGGGGACGGAAAC

>CP027241|10|8|1898108-1898363|CRISPRCasFinder
GTATGAACTAACAAATCCCCGCAAGGGGACGGAAAC	TATGTTACATACCCATGCAAAACTAAGAAATTTCGT
GTATGAACTAACAAATCCCCGCAAGGGGACGGAAAC	CATATACTCTTCTTTCTTATCAATTGAAATCTTAATATT
GTATGAACTAACTAATCCCCGCGAGGGGACGGAAAC	GACTTCTATCATCTCAAGAACCGTGAACAGATCCTTC
GTATGAATTAATAAATCCCCGCGAGGGGACGATTTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP027241.1|AVM69306.1|1891642_1892329_+|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223736
CP027241.1|AVM69316.1|1901633_1902335_+|hypothetical-protein	unknown	unknown	gnl|CDD|377990
CP027241.1|AVM69318.1|1904972_1905377_+|endosialidase	unknown	unknown	unknown
CP027241.1|AVM69310.1|1897893_1898100_-|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM69302.1|1888048_1889176_+|glycoside-hydrolase-105-family-protein	unknown	unknown	gnl|CDD|226678
CP027241.1|AVM69320.1|1906970_1907819_+|DegV-family-protein	unknown	unknown	gnl|CDD|273257
CP027241.1|AVM69314.1|1899587_1900175_+|hypothetical-protein	unknown	unknown	gnl|CDD|372961
CP027241.1|AVM69305.1|1890671_1891070_-|reactive-intermediate/imine-deaminase	unknown	unknown	gnl|CDD|129116
CP027241.1|AVM69301.1|1886493_1887864_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213192
CP027241.1|AVM69309.1|1893836_1897739_+|CoA-substrate-specific-enzyme-activase	unknown	unknown	gnl|CDD|224835
CP027241.1|AVM69312.1|1899009_1899345_-|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM69303.1|1889190_1890009_+|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl|CDD|366542
CP027241.1|AVM69304.1|1890390_1890579_+|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM69313.1|1899369_1899591_+|hypothetical-protein	unknown	unknown	gnl|CDD|237551
CP027241.1|AVM69315.1|1900813_1901464_+|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM69317.1|1902557_1904963_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpC	unknown	unknown	gnl|CDD|223616
CP027241.1|AVM69308.1|1892846_1893500_+|cupin-domain-containing-protein	unknown	unknown	gnl|CDD|380358
CP027241.1|AVM69319.1|1905378_1906758_+|DNA-repair-protein-RadA	unknown	unknown	gnl|CDD|236994
CP027241.1|AVM69307.1|1892614_1892842_+|hypothetical-protein	unknown	unknown	gnl|CDD|378108
CP027241.1|AVM69311.1|1898498_1898987_+|hypothetical-protein	unknown	unknown	gnl|CDD|223695

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP027241.1|AVM69306.1|1891642_1892329_+|Crp/Fnr-family-transcriptional-regulator	gnl|CDD|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.44681e-31
CP027241.1|AVM69316.1|1901633_1902335_+|hypothetical-protein	gnl|CDD|377990	pfam08378, NERD, Nuclease-related domain. The nuclease-related domain (NERD) is found in a range of bacterial as well as archaeal and plant proteins. It has distant similarity to endonucleases (hence its name) and its predicted secondary structure is helix - sheet - sheet - sheet - sheet - weak sheet/long loop - helix - sheet - sheet. The majority of NERD-containing proteins are single-domain, but in several cases proteins containing NERD have additional domains which in 75% of cases are involved in DNA processing.	8.23026e-19
CP027241.1|AVM69314.1|1899587_1900175_+|hypothetical-protein	gnl|CDD|372961	pfam14202, TnpW, Transposon-encoded protein TnpW. This family of proteins is found in bacteria. Proteins in this family are typically between 54 and 75 amino acids in length. There is a single completely conserved residue G that may be functionally important.	5.68573e-07
CP027241.1|AVM69302.1|1888048_1889176_+|glycoside-hydrolase-105-family-protein	gnl|CDD|226678	COG4225, COG4225, Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only].	5.27251e-83
CP027241.1|AVM69320.1|1906970_1907819_+|DegV-family-protein	gnl|CDD|273257	TIGR00762, DegV, EDD domain protein, DegV family. This family of proteins is related to DegV of Bacillus subtilis and includes paralogous sets in several species (B. subtilis, Deinococcus radiodurans, Mycoplasma pneumoniae) that are closer in percent identity to each than to most homologs from other species. This suggests both recent paralogy and diversity of function. DegV itself is encoded immediately downstream of DegU, a transcriptional regulator of degradation, but is itself uncharacterized. Crystallography suggested a lipid-binding site, while comparison of the crystal structure to dihydroxyacetone kinase and to a mannose transporter EIIA domain suggests a conserved domain, EDD, with phosphotransferase activity. [Unknown function, General].	1.13661e-100
CP027241.1|AVM69305.1|1890671_1891070_-|reactive-intermediate/imine-deaminase	gnl|CDD|129116	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase. This protein was described initially as an inhibitor of protein synthesis intiation, then as an endoribonuclease active on single-stranded mRNA, endoribonuclease L-PSP. Members of this family, conserved in all domains of life and often with several members per bacterial genome, appear to catalyze a reaction that minimizes toxic by-products from reactions catalyzed by pyridoxal phosphate-dependent enzymes. [Cellular processes, Other].	1.01377e-54
CP027241.1|AVM69301.1|1886493_1887864_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	2.47091e-76
CP027241.1|AVM69309.1|1893836_1897739_+|CoA-substrate-specific-enzyme-activase	gnl|CDD|224835	COG1924, COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism].	1.61736e-84
CP027241.1|AVM69303.1|1889190_1890009_+|sugar-phosphate-isomerase/epimerase	gnl|CDD|366542	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel. This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae.	2.57044e-14
CP027241.1|AVM69313.1|1899369_1899591_+|hypothetical-protein	gnl|CDD|237551	PRK13902, alaS, alanyl-tRNA synthetase; Provisional.	0.000190328
CP027241.1|AVM69317.1|1902557_1904963_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpC	gnl|CDD|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	0
CP027241.1|AVM69308.1|1892846_1893500_+|cupin-domain-containing-protein	gnl|CDD|380358	cd02230, cupin_HP0902-like, Helicobacter pylori HP0902 and related proteins, cupin domain. This family includes prokaryotic and archaeal proteins homologous to HP0902, a functionally uncharacterized protein from Helicobacter pylori and Spy1581, a protein of unknown function from Streptococcus pyogenes. These proteins demonstrate all-beta cupin folds that cannot bind metal ions due to the absence of a metal-binding histidine that is conserved in many metallo-cupins. HP0902 is able to bind bacterial endotoxin lipopolysaccharides (LPS) through its surface-exposed loops, where metal-binding sites are usually found in other metallo-cupins, and thus may have a putative role in H. pylori pathogenicity.	2.65981e-18
CP027241.1|AVM69319.1|1905378_1906758_+|DNA-repair-protein-RadA	gnl|CDD|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
CP027241.1|AVM69307.1|1892614_1892842_+|hypothetical-protein	gnl|CDD|378108	pfam08984, DUF1858, Domain of unknown function (DUF1858). This domain has no known function. It is found in various hypothetical bacterial proteins.	6.84514e-12
CP027241.1|AVM69311.1|1898498_1898987_+|hypothetical-protein	gnl|CDD|223695	COG0622, COG0622, Predicted phosphoesterase [General function prediction only].	1.87037e-36

Protein sequences

>CP027241.1|AVM69310.1|1897893_1898100_-|hypothetical-protein
MQSGSGSGLKFIYRRKKFLTGFRLNFFLKFRSIPLPEYIGAKRKIKCPEIFPNIFILNGFSGFVNHAG
>CP027241.1|AVM69309.1|1893836_1897739_+|CoA-substrate-specific-enzyme-activase
MKQLGMDIGTSSVKLVLMEDGVIRGKWMGKHHGRLLATILAGLESLAPRDEDWLCAVTGANARIVTERTDVFRLGDVPALTEGLKKICPEAGSVIDIGGQGARFVTGLTAGMPEFNINEHCAGGTGSFFEDQMSRLNMKIEDYSALVRQARSVPRLSGRCAVFAKSDIIHHQQEGVPAPDILLGLCYAMVRNYKAAIVKNLPVVKPVAFVGGVTLNEGVVRAVREVFALMDGELLIPEEALYVSAIGAAVKAETVVSLEGLTADLTKAGEREAERILPKLLLTPGTVLAEPKMTGLIPADGCALGIDIGSTSTNLVLIGRDGRLLDAQYLRTAGDPEAAVRRGLNTIRRKYGEIPFLSVGVTGSGRERIGRMIGADAIRDEITAQAKGAVFAVPEADTVFEIGGQDSKYISLKNGEVADFQMNKICAAGTGSFVEEQAARMNIPIGEFGDLALTAEMPAELGERCTVFIETAIESKQAEGAEPKDIAAGLCHAIVRNYLHKVVGNRPVGRHIVLQGGVAYNPGIVAAFQQEYRERLTVSPCFSVSGAFGVALLALEAAGTEPSGFKGYDFPGAEAGSAVYSAEVEKNIAFYRRAKQSFFKGYEPAAVPGRKTVGIPYVLMMHKFFPLANAFFKALGFNVLLSDPSNRETIRLSQESARGETCYPVKLIYGHMLELAAKKVDYIFLPHVRTIKHEKSGAVSNYGCVYMQSAAVSIARVLRLEEKGIKLLNPTFDLDFGKEAMAAAMLAVGQELGRPKPLCVPALMAGAMAVRQYTAAAEKLGRELLDTLRPEDKVLVMITRNYGLQDPVLNMGIPELLLERGYKVINLEHLPAHDLSLEEDYPNLYWPFGQHILSGAKLIARHPNLYAVYLTNHGCGPDTMLAHMFKEEMGEKPYLQIEVDEHFSKVGVITRIEAFLNSLSRRPALPLPDDFELTAVKPRHRRLFVRPEELRRERDLYLPELGAYTEYIRDYFRRAYGLETKVMPGAGRLQLMLGRAETSAKEYLPFTALLGSVLHQLQKIKPEERARADFLIPMTEGAEADGQYAGGIRSVLNGKGYEQTGIFAPILEQAPITLKEPELLFRALLAGDLFYAAPPEKRENTKRQRIPDAAELVRLAAESRPEQAAGAVIAVVGTPLCQTVLNEGVLDTLEAEGIRIVRAPLAEALLFQWREEAHVQKNGAETLRRMRALLAEVFACLGQASAVTADMDQLTQTADRYVKGVQGGNLRYRYAKAVELGERFSAVLALAPRYENAAMVMEMRNLSAEVKARFMQIYFDGDWDETAWARLRSFLYYLKAGKNQ
>CP027241.1|AVM69308.1|1892846_1893500_+|cupin-domain-containing-protein
MAQVFSIAADRPPRSGMTISTVSGLRAKAEVVYFSLGAGTDISAETYPSPKLYIGAAGMTVFELGGKEHRKKAEVRSGELLIVPAGTLCGMAAADGSVYTEIIPGEELTMNQAVKAGEVFQLADLVAYEPGSIVNMDVASNEAMKFVIMAFDEGTGLSPHSAPGDALVFALEGKAVIGYEGQDHPIRAGENFRFAKGGLHSVTADGRFKMALLLTLK
>CP027241.1|AVM69307.1|1892614_1892842_+|hypothetical-protein
MAKVLDLKKTVFELVQENPEVAEVLSSIGLTEVKNPTVLNTVGKQFTIPQGVGQRGVSLETVIAAFRAHGFEIKE
>CP027241.1|AVM69306.1|1891642_1892329_+|Crp/Fnr-family-transcriptional-regulator
MEIPAKCRRCQQRCIDNVTFLTDLTEEKQQKIMQSAVRKKYKKDSYLFMAEDPIDAIYIVHSGKVKLSVCDREGREQIIGVFTERDTIWEGIFTEENKYPYGAVCMTDVDCCKLYRRDVESIMRDSAVALRVIGLLSRKLSDANERILLLATDSPKARLAGFLLQRSRQLGRDIFVSRLEEIAASIHLRPETVSRKIKEMEREGLIVKSGQSGIQILDSEGLRRVFQE
>CP027241.1|AVM69305.1|1890671_1891070_-|reactive-intermediate/imine-deaminase
MFHNVISSENAPKAIGSYSPGLCLNGLVLLSGQLPINPASGRIETEDIREQTRQAMKNIGALLKDADLTYRDIVRTTIFLADIHDFAAVNEAYAEYVEEPYPVRSCVQVAALPLGAKVEIEVTCVRGAISYE
>CP027241.1|AVM69304.1|1890390_1890579_+|hypothetical-protein
MPRNLPCRKASPFCAGAQPAKQNAIGVLQTANIEALRASANNASDLLSGIPSEKAKLFGEHN
>CP027241.1|AVM69303.1|1889190_1890009_+|sugar-phosphate-isomerase/epimerase
MKIGVRAHDYGRFTVAELAALLRREGYDAAQLALPKVFTGVDSYAVIDGRLIESIRQEFDRQKIEIAVFGCYMDLANPDREIRRKAVETFCACLKWAKELGARVIGTETAYARLSGDDRKAWRPDMLDSIWRILEAANRIDMTVALEPVYWHPLTGLEEVQELLRQAQDKTHLKLIFDPANLLELPEATDQDAYWRKWLGAVGEWIEIFHIKDFTVSPAGEYVPRLLGEGVIRYKPIAAWIKANRPDSCLIREEMAPAEAQKDIRFLKEMFC
>CP027241.1|AVM69302.1|1888048_1889176_+|glycoside-hydrolase-105-family-protein
MEIKRAEIIEKLDLVIDKLMNLEGPENEEELKAKGGEAIGYFKRDFGIKEWDWPQGVGLYGLFKLIKCLGREEYKDFLYRWFKDNLKAGLGSRNINTTAPLLTLVEVNEFFHDPEFEALCLDWAAWLMNCLPRTEEGGFQHVTSANGDRYGVRLNENEMWIDTIFMTVLFLNKMGHRYGRADWVAEAEHQVLMHIKYLYDKQTGLFYHGWTFNGRNNFGGIFWCRGNSWFTAGILEYIEAFDGRMNAGLKTFIVDTYKAQVKKLKELQAPSGLWHTVLTDESSYEEVSGSAAIAAGILRGVKTGILSDEYLECAFRAIKAILQNIAADGTVLNVSGGTGMGYDAEHYKNILIAPMAYGQSLTILALVRAIEYLSR
>CP027241.1|AVM69301.1|1886493_1887864_+|ABC-transporter-ATP-binding-protein
MVEIENLSLSYGNSPKVLKDISLSINKGECVLFTGKSGSGKSSIINSINGLAVRYDGAIMEGAIKIENRDVRDLQLYEISSLVSSVFQNPKTHFFNINTTLELLFYLENIGLSKKQMDERLNNMLELFPIRHLLNRDIFKLSGGEKQILCIAASYIAGTEIIVLDEPSSNLDEENIKVIKEMLTKLKDKGKTLIISEHRIFYLMDIVDKVFLIKDGELQKEYTKTDFMKIPSEKLNELGLRDKAKVNLTVPEIQNGGSFQIKNIEFKFGRENNKLLFKDISFEMGKIYGIVGTNGLGKSTLLRCLIGLERKSKDEIYLDGKKLSKTDRLKISSLVMQDVNHQLFTDSVINEVRLGIKNIESSYVENILKKLDLYELKDCHPMSLSGGQKQRVAIASVLCKNSKLIFFDEPTSGMDYYNMMNISHLINECKSDNKIIFIVSHDQEFLNSTADYVMHL
>CP027241.1|AVM69311.1|1898498_1898987_+|hypothetical-protein
MKIAIISDTHKVLGNLVSSLRRQAPDCLIHLGDGIREAALLKEELEIKVYAVKGKMDSEDDELAMPSTKETLVLELEGIRFLLTHGHRFGVKEGKVALLAEAKKQRAAIALHGHTHIFCDETVDGIRIINLGSPVLPKNGDSAGYVIFDTETGRAERIFIEV
>CP027241.1|AVM69312.1|1899009_1899345_-|hypothetical-protein
MYRKKEKKQVSPKRALVILTVDNYEEKEKMKGKTNKRSHLPDEKKHFQIPILRLLRNALAHPQNKIFNFSSFHNTYCRGLYCNQISRIDLIKHGNRKRNINKNWPNNYGRK
>CP027241.1|AVM69313.1|1899369_1899591_+|hypothetical-protein
MGTMNFNQKTEKYIKELKTQIELQDKLIESQDEIITNLKTEIEYYKKYIQDIEKRFDRMLQLGKELMEKGSKK
>CP027241.1|AVM69314.1|1899587_1900175_+|hypothetical-protein
MKNPFESLTTVQYHLKAVRKELAAFKSGEKYIQMKAYFLGIIRGLEAKVKKAEQELAKAHVQIVTVRNYWFEVANDLEREKQRQVQKVEKELEKMKNRALKAEKERDDAKDKITAQRQEIYRLGTALEEEKGEHMQEKRNEQNTGTKTTKKIGKTSYEVIVHFNDKSSETMQDKLKRIMLRELRRESNEKKDDFD
>CP027241.1|AVM69315.1|1900813_1901464_+|hypothetical-protein
MEKYGKSFKELNNREKKEYIIEYYKFHIIGGIAALVIVFSLLNHYVFNPPKQVIVDITITAPYADPEGVEELQAEIKKCVEAKTADKTGLVEILYFSEKNDPQMQMAMTAKLMGKAGTGELDILILDQDHLAYFMENEILLPLADYLTADEQAEYAAKSPVMGVKDGQKTAVAFAVPKDSPVGRLLPSDFQGYLAVYVNARDMELVKELLPILLRK
>CP027241.1|AVM69316.1|1901633_1902335_+|hypothetical-protein
MAQIIKKSNHLHSQIRKLYLEWLFYGILAAACLALLEITQMFSFLGIQLIFLKILDSLNNYRILKTGLGGEKKVFELINRLPRGYKILTDVKLVSGNKSSQIDFVIIGRNGIFIMEAKNMRGIIRGKESDKMLKKTKIGKSKDKYVSEIYNPILQILGHKKGIDSFLASRGHSYRAIPILYFSGEGRLEVESEKVKIIDQPVLVIDYIKRHDQDHISDFVQNKIIEDLMETID
>CP027241.1|AVM69317.1|1902557_1904963_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpC
MKELTLKAREALEHAAAAAQNLSSGQIGTEHILLGLLHSANLASEVLEAHNLTYGAVSEKLKEMKRKEPVVRKEAKGYTPGAERVLAGAAEVAAKMKSQQTGTEHILIAILQDADSMGSRMLDLLGVSGTNVYQALLKSIGQDYRSQKLKYTRDKKEGGVLEKYAKDLTEEARAKVFDPIIGRRREINRLIQILSRRTKNNPCLVGGPGVGKTAIVEGLAQRIAAGEVPDNLKKKRLMALNLSSMVAGSKYRGEFEERIRAVLEEVMSSGQIILFIDEIHTMIGAGGAEGSLDAANILKPQLARGNLQVIGATTQEEYRKYFEKDGALERRFQPIHVEEPTEEETIQILRELKPIYEEFHQVSITDEALIDAVRLSVRYISDRLLPDKAIDVLDEAASKTKMGRWELLPETGGREIRKWQAERAEALRQGDLPLVKMLQRKLERKKEGLKQSGDGSYVVDKERIAEVVSDWSGIPVKQLSEEESERLRHLEERLKQKIIGQDEAVEAVSRAIKRGRVGVKDPAKPVGSFMFLGPTGVGKTELSKALAEILFGDKNMLIRVDMSEYMEKHSVAKFIGSPPGYVGHEDGGQLSEKIRQKPYSIILFDEIEKAHPDVFNILLQVLDDGHITDSHGRRVDFKNTIIIMTSNLGAQNLVNQNSLGFQTTENREQDHKAMKKKVMDEVKRLFRPEFINRLDELIVFHSLSEDDIKRIVGLLFEDLAKRLSAARGIFLRLTPTAVSFIARKGYNKSYGARPIKRAIQEHIEDELANQILEGRIKAGDTVSIRAVKEKLTFTIKQGKEN
>CP027241.1|AVM69318.1|1904972_1905377_+|endosialidase
MKLEKLISAAKGLLNFGDCESVEKQKQEGFELDGNIYNIKSHKEITRLEKNSYLLYESVPGTVVTDFCVGASEVTFTVNGVEPVQVTLGLEPDAEYRLLINSTQVGKVNANHSGKISFSLSFDAGAQKIKMEKK
>CP027241.1|AVM69319.1|1905378_1906758_+|DNA-repair-protein-RadA
MAKEKAAKSVFFCSECGNESPKWLGKCPACGVWNSYVEEPKAREKGVSGPVRRNLLPEAARPEKLKDISLSEEIRISTGLQELDRVLGGGVVEGSVILIGGDPGIGKSTLLLQICQRLGHQDKKILYVSGEEALRQIKLRADRLGVNEENLLIYSEVGFDAIADTIAQEKPDILMLDSIQTIYQPEISSAAGSISQVREVTAELVRLAKTTGMAVFIVGHVTKEGLIAGPRVLEHMVDTVLYFEGDKNAAYRLLRAVKNRFGATNEVGIFEMKQTGLQEVLNPSEYMLNGRPVNEYGSVAACVMEGTRPLIIEVQALLAGMAFNIARRTVTGYDYNRLLMLLAVLERKGGLKLNMLDCFVNLAGGLKVDETAVDLGVATAIYSAYLEIPLPQPVLVMGEVGLTGEIRGIPFGEQRIKEAKKLGFEKVIIPQANLTKSNADKSIELIGIRHIKQLKELLF
>CP027241.1|AVM69320.1|1906970_1907819_+|DegV-family-protein
MIKLIVDSSADCPDFVVNDERVTILPLSINFGDKEYFDRRTLTPNEFFEKLKTEKEMPKTSQVTPEAFIGEFKKELAAGNQVVCLTIASVASGTFQSAMIAKEEVGGGDDILLIDSNMLCLGEAYLAIKILNWIGEGKSLTEIEELAKPYTKNKIEHLFSVDTLEFLKRGGRITGTKAFVAELLDLKPILIVEDGMTKPISKVRGRKRVIPYYIKHMKENLDREQTEFICLGHGADPAIAKQLEQTIREELQWEKPIFISEIGPTIGTHAGPGVFAVFYVKK

Crispr_ID: CP027241_11

• CRISPR_ID: CP027241_11
• CRISPR_location: 2128462-2128553
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP027241_11

Consensus_repeat	Method
GTAGCCTTTTCTTTAAATGTCGATGT	CRISPRCasFinder

spacers of CP027241_11

>11.1|2128488|40|CP027241|CRISPRCasFinder
AAAGAATTCAATCCGTTTTTATCTTCCTAAGGAATAAACA

CRISPR arrays and Neighbor proteins around CP027241_11

CRISPR arrays

The CRISPR arrays of CP027241_11

>merge|CP027241|11|2128462-2128553|CRISPRCasFinder
GTAGCCTTTTCTTTAAATGTCGATGTAAAGAATTCAATCCGTTTTTATCTTCCTAAGGAATAAACAGTAGCCTTTTCTTTAAATGCCGATGT

>CP027241|11|9|2128462-2128553|CRISPRCasFinder
GTAGCCTTTTCTTTAAATGTCGATGT	AAAGAATTCAATCCGTTTTTATCTTCCTAAGGAATAAACA
GTAGCCTTTTCTTTAAATGCCGATGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP027241.1|AVM69476.1|2120514_2121384_+|restriction-endonuclease	unknown	unknown	gnl|CDD|224629
CP027241.1|AVM69482.1|2131292_2132141_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
CP027241.1|AVM69486.1|2136126_2137809_-|hypothetical-protein	unknown	unknown	gnl|CDD|270298
CP027241.1|AVM69485.1|2134925_2135699_-|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM69478.1|2122913_2123801_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
CP027241.1|AVM69474.1|2116430_2118665_+|serine-protease	unknown	unknown	gnl|CDD|173793
CP027241.1|AVM69490.1|2142706_2144263_+|ribonuclease-Y	unknown	unknown	gnl|CDD|237177
CP027241.1|AVM69477.1|2121979_2122702_+|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM69471.1|2113047_2113635_+|SMI1/KNR4-family-protein	unknown	unknown	gnl|CDD|378155
CP027241.1|AVM69480.1|2126688_2128458_+|hypothetical-protein	unknown	unknown	gnl|CDD|225519
CP027241.1|AVM69481.1|2128727_2131097_-|hypothetical-protein	unknown	unknown	unknown
CP027241.1|AVM69484.1|2133303_2134752_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270303
CP027241.1|AVM69488.1|2138859_2139804_-|protein-lplB	unknown	unknown	gnl|CDD|226666
CP027241.1|AVM69473.1|2115373_2116438_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|365803
CP027241.1|AVM69487.1|2137962_2138844_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
CP027241.1|AVM69475.1|2118679_2120410_+|hypothetical-protein	unknown	unknown	gnl|CDD|379114
CP027241.1|AVM69479.1|2125110_2126685_+|hypothetical-protein	unknown	unknown	gnl|CDD|227095
CP027241.1|AVM69489.1|2140250_2142422_+|hypothetical-protein	unknown	unknown	gnl|CDD|225117
CP027241.1|AVM69483.1|2132156_2133080_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
CP027241.1|AVM69472.1|2113765_2114980_+|hypothetical-protein	unknown	unknown	gnl|CDD|306825

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP027241.1|AVM69476.1|2120514_2121384_+|restriction-endonuclease	gnl|CDD|224629	COG1715, Mrr, Restriction endonuclease [Defense mechanisms].	2.76769e-36
CP027241.1|AVM69482.1|2131292_2132141_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	8.44759e-74
CP027241.1|AVM69486.1|2136126_2137809_-|hypothetical-protein	gnl|CDD|270298	cd13580, PBP2_AlgQ_like_1, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	6.54316e-81
CP027241.1|AVM69478.1|2122913_2123801_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.11946e-64
CP027241.1|AVM69474.1|2116430_2118665_+|serine-protease	gnl|CDD|173793	cd04847, Peptidases_S8_Subtilisin_like_2, Peptidase S8 family domain in Subtilisin-like proteins. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	1.95703e-70
CP027241.1|AVM69490.1|2142706_2144263_+|ribonuclease-Y	gnl|CDD|237177	PRK12704, PRK12704, phosphodiesterase; Provisional.	0
CP027241.1|AVM69471.1|2113047_2113635_+|SMI1/KNR4-family-protein	gnl|CDD|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	3.80371e-13
CP027241.1|AVM69480.1|2126688_2128458_+|hypothetical-protein	gnl|CDD|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.00465e-26
CP027241.1|AVM69484.1|2133303_2134752_-|ABC-transporter-substrate-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.425e-38
CP027241.1|AVM69488.1|2138859_2139804_-|protein-lplB	gnl|CDD|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	1.9007e-126
CP027241.1|AVM69473.1|2115373_2116438_+|AAA-family-ATPase	gnl|CDD|365803	pfam00004, AAA, ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.	1.43395e-21
CP027241.1|AVM69487.1|2137962_2138844_-|ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	3.37917e-65
CP027241.1|AVM69475.1|2118679_2120410_+|hypothetical-protein	gnl|CDD|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	1.22933e-16
CP027241.1|AVM69479.1|2125110_2126685_+|hypothetical-protein	gnl|CDD|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	2.61186e-55
CP027241.1|AVM69489.1|2140250_2142422_+|hypothetical-protein	gnl|CDD|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	3.38666e-25
CP027241.1|AVM69483.1|2132156_2133080_-|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	5.89524e-73
CP027241.1|AVM69472.1|2113765_2114980_+|hypothetical-protein	gnl|CDD|306825	pfam00395, SLH, S-layer homology domain.	0.000981478

Protein sequences

>CP027241.1|AVM69480.1|2126688_2128458_+|hypothetical-protein
MLAYMKKYFGDWPIRSKIMLLTISVNTVTLFAVVLAMYLIYQADSLERINRSIGKNMEIAEGQVIEKINKILIDSFELTANHLFQVCTKQENLSKQQYLINYLTLQNSLYKMTQSSVLIDTVFVAHKQKNIYNLERLGMKQPEEVFSGWELERIDGITFLPTCINPYGDHGRVIPLAIPVDEIEGLNVPIIGTDMAKAEMTIFVLLSQERLQGLLQSLNTVADSYLYLADAQAQGLSLVLPESLARSLNQDMTADWGAVREKIGVERKDYYLSFRSLPDFPLKLVHLLPKSVFGEVTKKVRPIFLLIWLLTSLLAAGMTVLLSDVITKPLLYIIQKVSANQRIEKKAKYKDEIGILITALTGMYETIDRQIQTIEKQAEQVRTAEMEMLTQQINPHFLYNVLDNTRWKILAEDKAAADIIEKLSAFLRLSLNQGNRELPFEQEIRHIQLYLNIMAYVERQDIRLLVDYENALKEYSIIHLILQPMVENSIKHGFSEPFPETVSKEIRIGFYQDGENLVLEVTDNGKGMNIAKMKACCGEQVLAEDAPKGSIGLRNVYLRLCRRYNTAIKAEFFSIPYVKNSICFYLPKE
>CP027241.1|AVM69479.1|2125110_2126685_+|hypothetical-protein
MKEFSLLIVEDNISSREGLAKSITGMELGIAHIYTAKNGQEALTYLRKLKIDIVLTDICMPQMDGLELIQCCRAEKHRVEFIIISGFEDFRYAQTAIRYGVKAYLLKPVSVEELCKELKTMIESLKEKGRESGLSGAALAEREKELFLQKIIKGDILPENIQAAWRRYLQPETGRYLAVVMDCLFFHEEGYDKGLIAQEAAAFFQDRALSGRYEIILTNANQFVLLLFPEKESPEFMRETIEEFNRRLNKKLRHDVYFGVGSEVSAPAELTLSCQTAGKAAAYLLFEPENKVIWGEELTLSSVMPTAAQTEAPLAVYQAITEHAEEKIKEHLNTFFSGFFSEGFPPPHFVRGMCTYMVISVQTELEKLAVENDSDWGEALSYDVINNLWTISEIHRLLEGLFLSYSRYLQKAHTIIDPIMKKSLFFIKNNLDQPLHVNDVAGYVNLSPGYFSAYFKTKMKCNFKEYVVERKMEEAKRLISAGDLSLDEIALRVGYDQYRSFHRVFKKAEGISPSEYQKQRTEKG
>CP027241.1|AVM69478.1|2122913_2123801_-|carbohydrate-ABC-transporter-permease
MKKQFSGEKIFQIFDITLMCIFMVLVLIPVFTVLMTSFVSEAEIAQRGTFIIIPQKFDFSAYKMLLASGKNILRAYGNTLFRVLIGTFLNLLFTITLAYGLSRKNLKGRNLFTAFVFFTMFFSGGLIPTFILVKSLNLLDSRWSMIFPGLINTWNLLIMRNFFYAIPKSLEEAAIIDGANDMQILTKVVLPLSKASIATIGLFYAVAHWNAWFDAMLYINKTSLLPMQNILRNIITAASNIGDLGAEAYNSLDVIPPSQSIRAATIVITTLPILTVYPFIQKYFVKGVMVGSIKG
>CP027241.1|AVM69477.1|2121979_2122702_+|hypothetical-protein
MSLIQELHQIGAENVKEAFVDFLEQYLNPAFGSMSKRDIDILLFMKLQDLGLIQHNPELYEIVSSLKVTRAKARNLLYEAKMRTTTVEELDNELKNILKSPVFLKENDKISLEIGNPLLIDHLRDKLKKLKHITDGSFSPELVKLTIGAYAALFESMLNEKSKDTIRKALIQCGAIEEPTLKGILTNVFKSLAGKFLGKMGDEIVAGTSEYFSAIMEEDIRLIQQLFPRLLQSDDSEPSN
>CP027241.1|AVM69476.1|2120514_2121384_+|restriction-endonuclease
MKTLYDVPSYRNMMKELFQAIKELGGSGTIREIDEKTIEILKLPIEIQEIMHGTTSETEVEYRLAWTRTYLKKVGILENSARGIWVLTTKGREIQEINPDEIVKKVQEMILLKESGKKEINTEDENLENDGIDIPEEIQSWREKLKNVLCNLTPAAFERLTQRLLRESGFMQVKVTGKTGDGGIDGMGIVKLNGIISFHMLFQCKRYAGTVGAGEIRDFRGAMQGRADKGLFITTGKFTNAAIEEANRAGAAPIDLIDGDELVEKLKDLRLGVIPINDYSIDEEWFLSI
>CP027241.1|AVM69475.1|2118679_2120410_+|hypothetical-protein
MGGEKLKSKIFLKKVKLEKYKCFENMEISFKDLTIIVGENNAGKSCLVEALRLIATAARQSKSREFKQAPGCLELPLAIRGFVIKVEKLKIDLEKAIYFYGDEAAKITAVFCDDWKIEIHVTKEVAFAVFYDSDGMNIKKKIKPDVSHFNNIAILPQIGLIRDNERLLSTKTVEEDKDTYLTSLHFRNEIFLHKEEFFEEFKKLSETTWFGLEINEVEYNYGTSEYLEFFLKDNSFPAEIADMGSGIKMWLQIMWFLARTKNNDIIILDEPDVYMHADLQRKLLDIVKMRYPQVIIATHSLEIIGRVEPENIVSVNKKDKQLRYATDSSAVQNIVDNIGGIHNLSLIRLGLARKCLFVEGKDLPYLNRFNEILYGKKIDLPILEYGGFSKLSNTFGASNLLFSESKGNIKCYALADRDYRTDDIVDQQIKEATKQHLELHIWEKKEIENYLIDTKVLYRIVERYQEESYEDFCGRIEELVEGMKDLVIDGYADMLQQRNRGMELSTCNIKAREIIKNCWGTLESKISLVNGKDLLAKIREYCQSKYKVTLTDNLIQKSFTMEDVPMEIKTVLAKVQ
>CP027241.1|AVM69474.1|2116430_2118665_+|serine-protease
MNNVLELKGKRFIQANKDGSGGGPAINGKVIVSEEKMIQLANKLHQIKMFWKTQKRPFPGLLISVHYNKIAAKSNRISGLFKGKDSNFLVVGVKFNKEKTRHIITYYLEEKDIDKSIQLLLEAREVMSKHFSKGIQKAIFDNKKQMAAVPYNNFSINKSNFKQVVADVSYIDDFAIEEPELVKKQSIITLYNVGIDTKSLLREIGIDILSSRILDNQTIFLDENQLEILFEKMPYLVSMATVDLSELSPEDFIKEKQQDLRYIPSPTIEPTIGVIDTLFDKTVYFREWVDAYDMIDENIPTNSKDYRHGTAVSSLIVDGPKLNPWLEDGCGRFRVRHFGVATGGQFSSFSIIKKIKEIIMKNRDIKVWNISMGSNQEINDNFISAEAAVLDQIQYENDVIFVIAGTNKPNESIEKIGSPADSINGLVVNAVTKQGLSTKYTRKGLALSFFAKPDVSYYGGSEEQYIRVCEPLGAAYVAGTSFAAPWIARKLSYLIDILGFSKEVAKALIIDAARGWKENPTPEEVAVYGHGIVPTRIADIVQSQEDEIKFIVSDISEKWNTYNYYFPVPLKEEKYPYIARATMCYFPMCNRSQGVDYTNTELNLHFGRINNKGKLKDIVGDKQNQENIAGEEISYILEEEARERFRKWDNVKYVAEVPKESMRPKKSYTNKNWGMEIKTSNRLNPEDGKGIRFGVIVTLKEIEGVNRIDEFIRNCTLNGWLVNQIDIQSKVDIHRKVNEEIEFR
>CP027241.1|AVM69473.1|2115373_2116438_+|AAA-family-ATPase
MKKQNVLNLIKFHVERNETAFRNEAIQIARYFDSIGDSELAEYIMGLISEANLYIPQSSDFESEFLKQMDIREMNPLNLPVEITDDIKGIINAVNHNVGINKFLFEGLPGSGKTEAAKHIARLLDRSLFYVDFENLIDSKLGQTNKNITNVFQEINMLPYSNRVVILFDEIDVIALDRINSNDVREMGRVTSTILRELDRLTDLNKEIVIIATTNLFSNFDKALIRRFDAVISFNRYSTDDLITVAEHYLSSFIKKFKGISKDSRLFKKILKSADKLPYPGELKNIIKTSLAFSDTHLEHDYLRRLYNSLVGNLEQTSISELYEKGFTVREIEKLKGESKSTISRKLNKEDVNE
>CP027241.1|AVM69472.1|2113765_2114980_+|hypothetical-protein
MLQLKALSGVILSLLFTLFLTNAVLADLQHIIQNMPPFIDVDRAAWYYADVQIAYQSKLINGKTDTLFAPEDDMTVVEAVKLAACMHQLKKEGAVSLSAGADIWYQPYVDYAKDKGIIASDLNWGQKITRAGYMQIFARLITDDETKLNDVPDDFIPDVKMTHPDADAIYKLYRAGIAQGVDADRNCQPSAYIKRSEIAAILTRMVKESSRIVFMPGQNLMIRVQPQDAEDRLGNRVSLEVIVSGGKEPLSYQWEYFDEADRVFKKSVSEGNTSNQLKVLVEDRVCEYRCIIRDAAGKQIISNTVKVERYISEKLTITKQPEPQKGNIGKIVKLKVEVSGAKAPVTYQWEYSENSDGPFYKSEAIGNHTKELTVAIENTAYYYRCYIKDKEEKSIHSAAVLVAK
>CP027241.1|AVM69471.1|2113047_2113635_+|SMI1/KNR4-family-protein
MKISSELKKIEKYICENFEDWDLDDPVEEEYLDDYQEIAGASEEDMASFEEKFGIILPDEVKELYRYKNGSKYLSILPCVIDEREMAFCLMSLTEMENKKNYFQNRDALLTEFTEYFTSEDLDKMRNSKIKPYLFNKKWIPFARYCDSCYLILDFDPDKEGKEGQIICYIHDPDEVIYVAEGITELISKIMEEIN
>CP027241.1|AVM69481.1|2128727_2131097_-|hypothetical-protein
MIPDDMMYFPLEKDGFIRDFLATPLKSKGYISPTADSRHFSDQLAYEAYLRQEIGRQLAGVSEKEADGLPFSYFSTGHDYFVDQSDFYSTPVQNTLWLKTGIYSPVKQTVSAVLWTYQNVLVWCGGSLLLQATDSRYKPIGRYPFSLPLAEGYNEVLIYMTGLGVRDSRDILGLQLPAAPDLRLDLQGLPVAELRRKKELLFQINCRENFFSLPAGDKNGLFVTYSGQTLSLANHSQTWELPAPATEAEFYWTDENDQVLLRRKLEAISQIRPRYIAGGADAVYRLIAEKKRQPRATGIFFSVYHVLARYYFGKQTAEDLQLLREDLKLIRQRVDCSDFLIIGFLRLMKKYSLPQDLLDEIKESFLDFRYFMDEAGQDGMCFFSENHSLMFYAIQMMIGEMYPNDIFRCSGRTGTLQAQIGAARCRLWLADVAENGTEEFNSAGYLSVTLAALLLLVDFAPKDIAALAQSITDQLLQQAATHVFDGSVISPQGRVYRDVLYPYRQTVQGLLCLIFPELPYSDRECMWNICFATSAYRFPADLRSLAQTPVSKTYFSGNAEVTLHKTEDYILTSVQSPASAGRRSQPADSEQEAVKLLNEKFHGTTNFRPGVYGYQQHFGYAALSKEALLFINHPSGAADFTGMRPGYWYGNGIMPMTMQRQNRLGVIYQIPDDYPVTFTHIYLPAVKFDEVRREGLWTFAFFGQGAIALWSSVLPEPFDDAFTGCELRCYGKQTAFYIICESVVSEQREEFIKSCLAAPPHWDNSQLLLSDHSQIEMRYKAYPDDTQYV
>CP027241.1|AVM69482.1|2131292_2132141_-|carbohydrate-ABC-transporter-permease
MNKRKIKASTLLAYAFLLILTVFILYPILYVVLGSFKTNQELVLGGARLFPEVFIIDNYIEAWQLANFARYTLNSIFISTMVMLGILLLSSMAGYCFARKDFPLKNVIYGLLIAFMFVNIGSVSLRPLFELTIHFNLHTSLWSVILICIGMSQATNIFLVRGYMNTLPKELDEAAAIDGCSFFGIYYRIILPLLKPVMATIALLSFREAWNEYILPLVFTINDPNKRPLTVGVISLKNVSDGAAAWNIMFAGSTMSIMPIIILFLLTSRYFMSGMTVGAVKG
>CP027241.1|AVM69483.1|2132156_2133080_-|sugar-ABC-transporter-permease
MTSKKKSSLRTSAHKDRFTVWLMLSPTIFLFLVVSVYPFIWISKYIFYDYNGFVEYFIGLDNIKRLFSDKLFDVSILHTLEYAFFKLITIIPLALIVSVLLNQKLRGKNFFRTVFFIPTVISAAVASLVFYFVYSPYNGILNGTLKALHITNMKIDWLGNPGLVMLSIIFVAIWGGLGNYMVLFLAGLQSIPDSIYESSKIDGTNKLQDFFYITIPMLQPMLKVILMLAITTALKDYQSIMVLTGGGPAGRSQVMFLYVYQLMFGNENGDGAVQIGYGSTVGLASSIIIAIITVIYLRVSKKMDEAY
>CP027241.1|AVM69484.1|2133303_2134752_-|ABC-transporter-substrate-binding-protein
MKKSVSFIISLLLVLTMTLSACGNKEAAPQNQTKTDNQNTAEQSAKETPTVKDGEAVKVLVWSNNRHDSEYTLKKIAEFNEAHKGQIEIEYVIQTDNYTNMITMAAKSNQAPDVFSISGVTGGYDLRSYAEAKIVRPINEFLDADPDFRKFTNVDNYKMEGVNVLGSDVYWFPRTLRSGNRLIYNVPLLEEAGVTPPKTVPEMVAAAKKITEAGKGEKFGCVVPGQSAAIGRMIIPIAEISGIQYYDYKNGKYDFSGYKPVLEAFKQMFADGSMLPGCASMKVDPTRAQFSAGNVGFYGNASQEVGVLTTQFPAQMEWKAAELPSLTGEIKGALSATPFDGLALSASCKHPQEAFEVIRWFSSEDFMVEYVENGLALSITQDIMSKVDMSKIGKLQEFLPISYEGVYPMPPAVTPQGKEWKDALWETVIPQGTDIDQTIEEMNKIYNEALDRDVKAGKIKRLVIKDFDPMKPLAGTLEYLSE
>CP027241.1|AVM69485.1|2134925_2135699_-|hypothetical-protein
MSLFGEFAGIEKERLKKYEYSSGGDMLGGSYSQSVQEYNEDSAIVTIMQRKWHGADDVIKEYLVDKEILNELKAVFVKYRMKNWDNKKFTNMFIADGASSSHYFKFETKIVSFSSQHYPEKYASKLKELNEVWDKYWENATLLPGLRIDDTVTKDDWELPYDLNNGKIVLSVYSYSYYQKCLCYRLANGTKETKKAEFVIRLYRDGESTPIYERSSEVTAEIDANSTKKGSIELEEPLTGGKYRLEAVGYTTEFEIQ
>CP027241.1|AVM69486.1|2136126_2137809_-|hypothetical-protein
MKQQNALKKMFSLLLALTMLLSLAACGETKAPETKTDEKAAQTGSEKPADNGAAEKDTAKDAPKEAPVEIQIVSSAQPDVDARIVKMVEEKYNVKFNWDWVVDNKKFNEIMGVKLSAGEMPDFVMLPDSGDINKYIKQGLAAEITPEMQAKIPTYFEVVEKYDENNNMWVDAKRNGKLYGLKPISSQGAYPTVLIWRTDWLKNVGINEIPKTLEEFEKAMYAFKEKDPDKDGQANTYGLSETAFDAVFGAFGAIPLKTLGKGRQVLFITKNEAGELAFACTRPEMKEALAKLQQYYKDGVIDPEFVTGENTGGYWATSHAFINGRIGVTGKVLPTHWNPPYDNEGQGGAVYQEMLAANPNAKFGETFDIGTAIEGPHGKSGLHKWGAVNSNIGVFTTKCVQDERKTNALLQLIEDTFTDYDFYLLLTKGIEGVHYTKNADGKLVRNSTDFPKDNDLRKDGVYIFELLQQPDFRKKALPDYYEFIEKYNGPSYTDEMYPKTESYSKNISALERLTVETYMSIITGEKPADYFDEYVKLFYENGGTAIEQEMNAQVKENLGK
>CP027241.1|AVM69487.1|2137962_2138844_-|ABC-transporter-permease
MRRKKKTTENKVFDAVVYFLLIGLGLLTITPFLQVITISLSPQEELAKYGMHIFPKQITLAGYERVLSYAPIWLAYLNTIIRTVSGTTLSICTLLLGAYALSKPYFPHRRFWTLFIVFTMYFSGGLIPRYILVNNVLKMGNSMFALIIPGLASGFNLIIMRNFFSNISLSYEEAAKIDGASHFQILRQVYLPLSKPIIATVSLWVGVGHWNEWFDSMLYIRDEKKQVLQFVLRKLLLEGTSIEEEMAAGTQIFVNSDTMKMAALILSIIPVLMIYPFLQKHFVQGLKLGGVKE
>CP027241.1|AVM69488.1|2138859_2139804_-|protein-lplB
MEKASEIYLKQKQKRTTWQDYKKHKSLILMALPLLIYFAIFHYGPIYGLLIAFKDFYPTKGILASDWVGLEHFKTMFQGLYFWPVLKNTIINSSYNLIFGFPAPILLAILLNEVSSRRFKKVIQTVTYFPHFISWVVLAGIVYEMLSPSRGPINILLSWLGFEPIFFVANVRWFRTVLVGSNIWKEIGWGSIIYLAAITNIDPTLYEVAKIDGANRLQRIFYITLPGIANVVVIMLIFAVGKIINDNFDQIFNLMNNQVMQVADVISTYTYREGIKEMNYGYATAVGLFKNTISFIFVMGANWLAQKMGQETLF
>CP027241.1|AVM69489.1|2140250_2142422_+|hypothetical-protein
MFLRKSHSYFYSISLAQKIFLVCFFLSTLSLTIVPGLLMLQYTNLLQSQIEQKNINVLNQLAKHVDAALAEENFRHLQQLTSIWEDSDFTVAGSSVAAYHLFKSWEHYTMLHPTLDSACLYHLPSDTMLSSQEGLRYHFLSRAETPYAQYLKDNADFSKKAQWFPAFALVRAENKKEPIQLISFFQPSSDLFLFNPPHYYLLLNYDVAYLERQILPVLDPNGYFEIADAGQLLYSGRPGGAEDRKFLMYSMVSSVSGWTYRYFVPVSFWGSPWLLMLCFGVGVSLTGLCLAFFLSKLLSKKLYRPLGNLLAAIGAHSPEKEISPNEIDFIQTVFHELYSSKEILEANLPLFEYQIGRLIFNGKITGQEEIADKLKLTSLTLSAEQFRLFLLAFPQTALHKNPMLPYESVAYIKEAFFSEHNALCVPYPENCISILIAAKETAADFEQIRREVSAVFESPCGLLISDCLKDFSGIGKAFSVLKAGRSYFALYGYEAVLTQKQIQQHQETRLHLAPLFMASLEESLAHNPDKFLEKCREVLCFAKEKTIHFEDWIDFCRGLFYMLEAHSQTVGLSSAFLGLKKSCFSISCPQDYEYLCESYSDLWKAAAGAGKETDSSAEYIERIKRYVLQNINADLSLEAVADKFGLTPNYLSRIFHEYSQITFSNFLKEAKLKKAADLLKEKDTQVQNVAAAVGYQTPNYFNRIFKEYYGVTPLQYRRKYLQT
>CP027241.1|AVM69490.1|2142706_2144263_+|ribonuclease-Y
MPQEALYGIAAVAILLVSCYISYRAGENHRKKVAEAQYGGAEQKARTIVDEAIKEAETVKREAGLAVKEETFKLKNELEQEVKERRNELSRLEKRVLQKEEALDKKAADFERKEQSVADKENSLKKAKQEVEELKAQHLSELEKISSLSTEQAKEYLLQLVREDVQHESAIIIKEFEAKVKEESNKRAKEILSTAVQRCASDYVAESTVSVVNLPNDEMKGRIIGREGRNIRALETLTGVDFIIDDTPEAVILSGFDPMRREIARIALEKLIVDGRIHPARIEEMVEKAKKEVDESIREAGENAIMDTGVHGLHQDLVKILGRMKYRTSYGQNVLKHSIEVSILCGLIANELGADVKLAKRAGLLHDIGKAIDHETEGSHVEIGVNLCKKYKENKIVINAVQAHHNDVEPETDIAVIVQAADTISAARPGARRETLESYVTRLTKLEEIADSFDGVEKSFAIQAGREVRVMVVPERISDDKMVLLSREVAKRIEEELDYPGQIKINVIRETRAVHYAK

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP027241_4	4.3|672445|28|CP027241|CRT	672445-672472	28	KX456211	Lactococcus phage 63301, complete genome	4460-4487	2	0.929
CP027241_4	4.3|672445|28|CP027241|CRT	672445-672472	28	KX160215	Lactococcus phage 98104, complete genome	1210-1237	3	0.893
CP027241_4	4.3|672445|28|CP027241|CRT	672445-672472	28	KX160205	Lactococcus phage 49801, complete genome	1200-1227	3	0.893
CP027241_4	4.3|672445|28|CP027241|CRT	672445-672472	28	KX160207	Lactococcus phage 53801, complete genome	3845-3872	3	0.893
CP027241_4	4.3|672445|28|CP027241|CRT	672445-672472	28	KX160212	Lactococcus phage 98101, complete genome	1142-1169	3	0.893
CP027241_4	4.3|672445|28|CP027241|CRT	672445-672472	28	AF323670	Bacteriophage bIL309, complete genome	4580-4607	3	0.893
CP027241_4	4.3|672445|28|CP027241|CRT	672445-672472	28	NC_002668	Lactococcus prophage bIL309, complete genome	4580-4607	3	0.893
CP027241_4	4.3|672445|28|CP027241|CRT	672445-672472	28	KX160214	Lactococcus phage 98103, complete genome	1219-1246	3	0.893
CP027241_4	4.3|672445|28|CP027241|CRT	672445-672472	28	KX160213	Lactococcus phage 98102, complete genome	1285-1312	3	0.893
CP027241_2	2.5|513756|24|CP027241|CRT	513756-513779	24	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	116082-116105	4	0.833
CP027241_4	4.3|672445|28|CP027241|CRT	672445-672472	28	MK448775	Streptococcus phage Javan489, complete genome	22341-22368	4	0.857
CP027241_4	4.3|672445|28|CP027241|CRT	672445-672472	28	KJ564038	Lactobacillus phage Ld3, complete genome	24801-24828	4	0.857
CP027241_4	4.3|672445|28|CP027241|CRT	672445-672472	28	KJ564036	Lactobacillus phage Ld25A, complete genome	27161-27188	4	0.857
CP027241_4	4.7|672443|30|CP027241|PILER-CR	672443-672472	30	KX160207	Lactococcus phage 53801, complete genome	3845-3874	4	0.867
CP027241_4	4.7|672443|30|CP027241|PILER-CR	672443-672472	30	KX456211	Lactococcus phage 63301, complete genome	4460-4489	4	0.867
CP027241_4	4.7|672443|30|CP027241|PILER-CR	672443-672472	30	KX160215	Lactococcus phage 98104, complete genome	1210-1239	5	0.833
CP027241_4	4.7|672443|30|CP027241|PILER-CR	672443-672472	30	KX160205	Lactococcus phage 49801, complete genome	1200-1229	5	0.833
CP027241_4	4.7|672443|30|CP027241|PILER-CR	672443-672472	30	KX160212	Lactococcus phage 98101, complete genome	1142-1171	5	0.833
CP027241_4	4.7|672443|30|CP027241|PILER-CR	672443-672472	30	AF323670	Bacteriophage bIL309, complete genome	4580-4609	5	0.833
CP027241_4	4.7|672443|30|CP027241|PILER-CR	672443-672472	30	NC_002668	Lactococcus prophage bIL309, complete genome	4580-4609	5	0.833
CP027241_4	4.7|672443|30|CP027241|PILER-CR	672443-672472	30	KX160214	Lactococcus phage 98103, complete genome	1219-1248	5	0.833
CP027241_4	4.7|672443|30|CP027241|PILER-CR	672443-672472	30	KX160213	Lactococcus phage 98102, complete genome	1285-1314	5	0.833
CP027241_4	4.7|672443|30|CP027241|PILER-CR	672443-672472	30	MK448775	Streptococcus phage Javan489, complete genome	22341-22370	5	0.833
CP027241_4	4.7|672443|30|CP027241|PILER-CR	672443-672472	30	KJ564038	Lactobacillus phage Ld3, complete genome	24801-24830	5	0.833
CP027241_4	4.7|672443|30|CP027241|PILER-CR	672443-672472	30	KJ564036	Lactobacillus phage Ld25A, complete genome	27161-27190	5	0.833
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	KC736071	Mycobacterium phage WIVsmall, complete genome	10204-10231	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HC001412	Sequence 17 from Patent WO2009106635	2452-2479	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551563	Sequence 3 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	FJ881694	Enterobacteria phage T7 RNA polymerase gene, complete cds	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551621	Sequence 61 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	LF398928	JP 2014528730-A/1: RNA polymerase mutants	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551583	Sequence 23 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551565	Sequence 5 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HW374671	JP 2012223202-A/47: Conserved HBV and HCV Sequences Useful for Gene Silencing	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551575	Sequence 15 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551579	Sequence 19 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551599	Sequence 39 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	JA821311	Sequence 47 from Patent EP2284268	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HW805501	JP 2015015955-A/8: CELLS AND METHODOLOGY TO GENERATE NON-SEGMENTED NEGATIVE-STRAND RNA VIRUSES	2272-2299	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	DQ100054	Bacteriophage T7.1 section alpha sequence	5630-5657	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	LP718681	Sequence 176 from Patent EP2885419	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551607	Sequence 47 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HV235491	JP 2009213497-A/1: Improved RNA Polymerase	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HV701371	JP 2012075418-A/5: Improved RNA polymerase mutant	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551585	Sequence 25 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551577	Sequence 17 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551595	Sequence 35 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551619	Sequence 59 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551597	Sequence 37 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	DM025976	Conserved HBV and HCV Sequences Useful for Gene Silencing	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	E43997	Improved RNA polymerase	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551581	Sequence 21 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551571	Sequence 11 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HV547440	JP 2011224013-A/47: Conserved HBV and HCV Sequences Useful for Gene Silencing	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	MP478605	Sequence 40 from Patent WO2020012335	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551593	Sequence 33 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	AY264774	Enterobacteria phage T7, complete genome	5458-5485	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	AY264775	Enterobacteria phage T7 isolate K, complete genome	4613-4640	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551615	Sequence 55 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551605	Sequence 45 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551611	Sequence 51 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551567	Sequence 7 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HV235493	JP 2009213499-A/1: Improved RNA Polymerase	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551561	Sequence 1 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	MG833025	Mutant Enterobacteria phage T7 strain T7Del1revsplitRNAP, complete genome	2126-2153	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	AY264776	Enterobacteria phage T7 isolate K115, complete genome	3843-3870	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	CS086837	Sequence 3 from Patent WO2005040388	2945-2972	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	V01127	Left end of bacteriophage T7 genome. Includes the reading frames of the genes 0.3, 0.4, 0.5, 0.6, 0.65, 0.7, 1, 1.1, 1.2, 1.3 (early proteins) and 1.4, 1.5, 1.6, 1.7, 2, 2.5, 2.8, 3, 3.5, 4A and 4B (late proteins). Gene 1 is the T7 RNA polymerase	5457-5484	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551569	Sequence 9 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	DD451662	Method for detecting the interaction of protein	2452-2479	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HZ771599	JP 2015003913-A/47: Conserved HBV and HCV Sequences Useful for Gene Silencing	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551601	Sequence 41 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	NC_042057	Enterobacteria phage DE3, complete genome	4312-4339	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551617	Sequence 57 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	JA842209	Sequence 47 from Patent EP2316942	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	AY264778	Enterobacteria phage T7 isolate P82, complete genome	4620-4647	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	DM465311	RNA Polymerase Mutant With Improved Function	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	M38308	Bacteriophage T7 RNA polymerase gene, complete cds	2452-2479	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HV703014	JP 2012080889-A/2: Multiple-Compartment Eukaryotic Expression Systems	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	DM139659	Compositions, Methods and Kits for Real-Time Nucleic Acid Analysis in Live Cells	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HV703015	JP 2012080889-A/3: Multiple-Compartment Eukaryotic Expression Systems	2945-2972	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551587	Sequence 27 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	GM604318	Sequence 8 from Patent EP1939214	2272-2299	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	LQ979057	Sequence 1 from Patent WO2013050609	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HV235492	JP 2009213498-A/1: Improved RNA Polymerase	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	AY264777	Enterobacteria phage T7 isolate P, complete genome	4616-4643	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HC768866	Sequence 17 from Patent WO2010049807	2300-2327	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	GM677256	Sequence 8 from Patent WO2008078198	2272-2299	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	CS038863	Sequence 1 from Patent EP1512742	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HV029889	JP 2011051943-A/5: Protein extraction reagent and method for screening polymerase using the same	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	FW366198	CELLS AND METHODOLOGY TO GENERATE NON-SEGMENTED NEGATIVE-STRAND RNA VIRUSES	2308-2335	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551609	Sequence 49 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HW805502	JP 2015015955-A/9: CELLS AND METHODOLOGY TO GENERATE NON-SEGMENTED NEGATIVE-STRAND RNA VIRUSES	2308-2335	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551603	Sequence 43 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551591	Sequence 31 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HV701390	JP 2012075418-A/24: Improved RNA polymerase mutant	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	FW343405	Expression vector for multiple gene expression	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	V01146	Genome of bacteriophage T7	5457-5484	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	LR745708	Escherichia phage T7 genome assembly, chromosome: 1	5458-5485	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551613	Sequence 53 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	LY802968	KR 1020200018071-A/1: Modified pT7/T7 polymerase system for sustainable shRNA expression in cytoplasm and liposome transporter comprising it	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	CS086836	Sequence 2 from Patent WO2005040388	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551589	Sequence 29 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	GM604320	Sequence 10 from Patent EP1939214	2308-2335	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	JA866434	Sequence 47 from Patent EP2270162	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	LQ307592	Sequence 177 from Patent WO2016049492	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	GM677258	Sequence 10 from Patent WO2008078198	2308-2335	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	HI551573	Sequence 13 from Patent EP2185716	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	DJ011524	Multiple-Compartment Eukaryotic Expression Systems	2287-2314	6	0.786
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	LY802971	KR 1020200018071-A/4: Modified pT7/T7 polymerase system for sustainable shRNA expression in cytoplasm and liposome transporter comprising it	2287-2314	6	0.786
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HC001412	Sequence 17 from Patent WO2009106635	2452-2481	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551563	Sequence 3 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	FJ881694	Enterobacteria phage T7 RNA polymerase gene, complete cds	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551621	Sequence 61 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	LF398928	JP 2014528730-A/1: RNA polymerase mutants	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551583	Sequence 23 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551565	Sequence 5 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HW374671	JP 2012223202-A/47: Conserved HBV and HCV Sequences Useful for Gene Silencing	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551575	Sequence 15 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551579	Sequence 19 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551599	Sequence 39 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	JA821311	Sequence 47 from Patent EP2284268	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HW805501	JP 2015015955-A/8: CELLS AND METHODOLOGY TO GENERATE NON-SEGMENTED NEGATIVE-STRAND RNA VIRUSES	2272-2301	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	DQ100054	Bacteriophage T7.1 section alpha sequence	5630-5659	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	LP718681	Sequence 176 from Patent EP2885419	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551607	Sequence 47 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HV235491	JP 2009213497-A/1: Improved RNA Polymerase	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HV701371	JP 2012075418-A/5: Improved RNA polymerase mutant	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551585	Sequence 25 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551577	Sequence 17 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551595	Sequence 35 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551619	Sequence 59 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551597	Sequence 37 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	DM025976	Conserved HBV and HCV Sequences Useful for Gene Silencing	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	E43997	Improved RNA polymerase	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551581	Sequence 21 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551571	Sequence 11 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HV547440	JP 2011224013-A/47: Conserved HBV and HCV Sequences Useful for Gene Silencing	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	MP478605	Sequence 40 from Patent WO2020012335	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551593	Sequence 33 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	AY264774	Enterobacteria phage T7, complete genome	5458-5487	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	AY264775	Enterobacteria phage T7 isolate K, complete genome	4613-4642	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551615	Sequence 55 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551605	Sequence 45 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551611	Sequence 51 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551567	Sequence 7 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HV235493	JP 2009213499-A/1: Improved RNA Polymerase	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551561	Sequence 1 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	MG833025	Mutant Enterobacteria phage T7 strain T7Del1revsplitRNAP, complete genome	2126-2155	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	AY264776	Enterobacteria phage T7 isolate K115, complete genome	3843-3872	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	CS086837	Sequence 3 from Patent WO2005040388	2945-2974	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	V01127	Left end of bacteriophage T7 genome. Includes the reading frames of the genes 0.3, 0.4, 0.5, 0.6, 0.65, 0.7, 1, 1.1, 1.2, 1.3 (early proteins) and 1.4, 1.5, 1.6, 1.7, 2, 2.5, 2.8, 3, 3.5, 4A and 4B (late proteins). Gene 1 is the T7 RNA polymerase	5457-5486	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551569	Sequence 9 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	DD451662	Method for detecting the interaction of protein	2452-2481	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HZ771599	JP 2015003913-A/47: Conserved HBV and HCV Sequences Useful for Gene Silencing	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551601	Sequence 41 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	NC_042057	Enterobacteria phage DE3, complete genome	4312-4341	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551617	Sequence 57 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	JA842209	Sequence 47 from Patent EP2316942	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	AY264778	Enterobacteria phage T7 isolate P82, complete genome	4620-4649	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	DM465311	RNA Polymerase Mutant With Improved Function	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	M38308	Bacteriophage T7 RNA polymerase gene, complete cds	2452-2481	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HV703014	JP 2012080889-A/2: Multiple-Compartment Eukaryotic Expression Systems	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	DM139659	Compositions, Methods and Kits for Real-Time Nucleic Acid Analysis in Live Cells	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HV703015	JP 2012080889-A/3: Multiple-Compartment Eukaryotic Expression Systems	2945-2974	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551587	Sequence 27 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	GM604318	Sequence 8 from Patent EP1939214	2272-2301	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	LQ979057	Sequence 1 from Patent WO2013050609	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HV235492	JP 2009213498-A/1: Improved RNA Polymerase	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	AY264777	Enterobacteria phage T7 isolate P, complete genome	4616-4645	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HC768866	Sequence 17 from Patent WO2010049807	2300-2329	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	GM677256	Sequence 8 from Patent WO2008078198	2272-2301	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	CS038863	Sequence 1 from Patent EP1512742	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HV029889	JP 2011051943-A/5: Protein extraction reagent and method for screening polymerase using the same	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	FW366198	CELLS AND METHODOLOGY TO GENERATE NON-SEGMENTED NEGATIVE-STRAND RNA VIRUSES	2308-2337	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551609	Sequence 49 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HW805502	JP 2015015955-A/9: CELLS AND METHODOLOGY TO GENERATE NON-SEGMENTED NEGATIVE-STRAND RNA VIRUSES	2308-2337	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551603	Sequence 43 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551591	Sequence 31 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HV701390	JP 2012075418-A/24: Improved RNA polymerase mutant	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	FW343405	Expression vector for multiple gene expression	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	V01146	Genome of bacteriophage T7	5457-5486	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	LR745708	Escherichia phage T7 genome assembly, chromosome: 1	5458-5487	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551613	Sequence 53 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	LY802968	KR 1020200018071-A/1: Modified pT7/T7 polymerase system for sustainable shRNA expression in cytoplasm and liposome transporter comprising it	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	CS086836	Sequence 2 from Patent WO2005040388	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551589	Sequence 29 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	GM604320	Sequence 10 from Patent EP1939214	2308-2337	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	JA866434	Sequence 47 from Patent EP2270162	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	LQ307592	Sequence 177 from Patent WO2016049492	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	GM677258	Sequence 10 from Patent WO2008078198	2308-2337	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	HI551573	Sequence 13 from Patent EP2185716	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	DJ011524	Multiple-Compartment Eukaryotic Expression Systems	2287-2316	6	0.8
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	LY802971	KR 1020200018071-A/4: Modified pT7/T7 polymerase system for sustainable shRNA expression in cytoplasm and liposome transporter comprising it	2287-2316	6	0.8
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	460909-460936	7	0.75
CP027241_4	4.4|672511|28|CP027241|CRT	672511-672538	28	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	460917-460944	7	0.75
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	KC736071	Mycobacterium phage WIVsmall, complete genome	10204-10233	7	0.767
CP027241_4	4.10|672444|36|CP027241|CRISPRCasFinder	672444-672479	36	KX160207	Lactococcus phage 53801, complete genome	3838-3873	7	0.806
CP027241_4	4.10|672444|36|CP027241|CRISPRCasFinder	672444-672479	36	KX160215	Lactococcus phage 98104, complete genome	1203-1238	8	0.778
CP027241_4	4.10|672444|36|CP027241|CRISPRCasFinder	672444-672479	36	KX160205	Lactococcus phage 49801, complete genome	1193-1228	8	0.778
CP027241_4	4.10|672444|36|CP027241|CRISPRCasFinder	672444-672479	36	KX160212	Lactococcus phage 98101, complete genome	1135-1170	8	0.778
CP027241_4	4.10|672444|36|CP027241|CRISPRCasFinder	672444-672479	36	KX160214	Lactococcus phage 98103, complete genome	1212-1247	8	0.778
CP027241_4	4.10|672444|36|CP027241|CRISPRCasFinder	672444-672479	36	KX160213	Lactococcus phage 98102, complete genome	1278-1313	8	0.778
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	460907-460936	9	0.7
CP027241_4	4.8|672509|30|CP027241|PILER-CR	672509-672538	30	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	460915-460944	9	0.7
CP027241_4	4.10|672444|36|CP027241|CRISPRCasFinder	672444-672479	36	AF323670	Bacteriophage bIL309, complete genome	4573-4608	9	0.75
CP027241_4	4.10|672444|36|CP027241|CRISPRCasFinder	672444-672479	36	NC_002668	Lactococcus prophage bIL309, complete genome	4573-4608	9	0.75
CP027241_4	4.10|672444|36|CP027241|CRISPRCasFinder	672444-672479	36	MK448775	Streptococcus phage Javan489, complete genome	22334-22369	10	0.722
CP027241_4	4.10|672444|36|CP027241|CRISPRCasFinder	672444-672479	36	KJ564038	Lactobacillus phage Ld3, complete genome	24794-24829	11	0.694
CP027241_4	4.10|672444|36|CP027241|CRISPRCasFinder	672444-672479	36	KJ564036	Lactobacillus phage Ld25A, complete genome	27154-27189	11	0.694

1. spacer 4.3|672445|28|CP027241|CRT matches to KX456211 (Lactococcus phage 63301, complete genome) position: , mismatch: 2, identity: 0.929

atccgtcatatatgcgccatgcttgcga	CRISPR spacer
atccgtcatatacgctccatgcttgcga	Protospacer
************.** ************

2. spacer 4.3|672445|28|CP027241|CRT matches to KX160215 (Lactococcus phage 98104, complete genome) position: , mismatch: 3, identity: 0.893

atccgtcatatatgcgccatgcttgcga	CRISPR spacer
atccgtcatatacgctccatgcttgcgg	Protospacer
************.** ***********.

3. spacer 4.3|672445|28|CP027241|CRT matches to KX160205 (Lactococcus phage 49801, complete genome) position: , mismatch: 3, identity: 0.893

atccgtcatatatgcgccatgcttgcga	CRISPR spacer
atccgtcatatacgctccatgcttgcgg	Protospacer
************.** ***********.

4. spacer 4.3|672445|28|CP027241|CRT matches to KX160207 (Lactococcus phage 53801, complete genome) position: , mismatch: 3, identity: 0.893

atccgtcatatatgcgccatgcttgcga	CRISPR spacer
atccgtcatatacgctccatgcttgcgg	Protospacer
************.** ***********.

5. spacer 4.3|672445|28|CP027241|CRT matches to KX160212 (Lactococcus phage 98101, complete genome) position: , mismatch: 3, identity: 0.893

atccgtcatatatgcgccatgcttgcga	CRISPR spacer
atccgtcatatacgctccatgcttgcgg	Protospacer
************.** ***********.

6. spacer 4.3|672445|28|CP027241|CRT matches to AF323670 (Bacteriophage bIL309, complete genome) position: , mismatch: 3, identity: 0.893

atccgtcatatatgcgccatgcttgcga	CRISPR spacer
atccgtcatatacgctccatgcttgcgg	Protospacer
************.** ***********.

7. spacer 4.3|672445|28|CP027241|CRT matches to NC_002668 (Lactococcus prophage bIL309, complete genome) position: , mismatch: 3, identity: 0.893

atccgtcatatatgcgccatgcttgcga	CRISPR spacer
atccgtcatatacgctccatgcttgcgg	Protospacer
************.** ***********.

8. spacer 4.3|672445|28|CP027241|CRT matches to KX160214 (Lactococcus phage 98103, complete genome) position: , mismatch: 3, identity: 0.893

atccgtcatatatgcgccatgcttgcga	CRISPR spacer
atccgtcatatacgctccatgcttgcgg	Protospacer
************.** ***********.

9. spacer 4.3|672445|28|CP027241|CRT matches to KX160213 (Lactococcus phage 98102, complete genome) position: , mismatch: 3, identity: 0.893

atccgtcatatatgcgccatgcttgcga	CRISPR spacer
atccgtcatatacgctccatgcttgcgg	Protospacer
************.** ***********.

10. spacer 2.5|513756|24|CP027241|CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 4, identity: 0.833

ttgcggctgaccaccctgcgggta	CRISPR spacer
ccgcggctgaccaccctgccggtc	Protospacer
..***************** *** 

11. spacer 4.3|672445|28|CP027241|CRT matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 4, identity: 0.857

atccgtcatatatgcgccatgcttgcga	CRISPR spacer
ttcggtcatatatgcgccatgtttgcgg	Protospacer
 ** *****************.*****.

12. spacer 4.3|672445|28|CP027241|CRT matches to KJ564038 (Lactobacillus phage Ld3, complete genome) position: , mismatch: 4, identity: 0.857

atccgtcatatatgcgccatgcttgcga	CRISPR spacer
gtctgtcatataagcgccatgcttgcgg	Protospacer
.**.******** **************.

13. spacer 4.3|672445|28|CP027241|CRT matches to KJ564036 (Lactobacillus phage Ld25A, complete genome) position: , mismatch: 4, identity: 0.857

atccgtcatatatgcgccatgcttgcga	CRISPR spacer
gtctgtcatataagcgccatgcttgcgg	Protospacer
.**.******** **************.

14. spacer 4.7|672443|30|CP027241|PILER-CR matches to KX160207 (Lactococcus phage 53801, complete genome) position: , mismatch: 4, identity: 0.867

ttatccgtcatatatgcgccatgcttgcga	CRISPR spacer
gtatccgtcatatacgctccatgcttgcgg	Protospacer
 *************.** ***********.

15. spacer 4.7|672443|30|CP027241|PILER-CR matches to KX456211 (Lactococcus phage 63301, complete genome) position: , mismatch: 4, identity: 0.867

ttatccgtcatatatgcgccatgcttgcga	CRISPR spacer
gcatccgtcatatacgctccatgcttgcga	Protospacer
 .************.** ************

16. spacer 4.7|672443|30|CP027241|PILER-CR matches to KX160215 (Lactococcus phage 98104, complete genome) position: , mismatch: 5, identity: 0.833

ttatccgtcatatatgcgccatgcttgcga	CRISPR spacer
gaatccgtcatatacgctccatgcttgcgg	Protospacer
  ************.** ***********.

17. spacer 4.7|672443|30|CP027241|PILER-CR matches to KX160205 (Lactococcus phage 49801, complete genome) position: , mismatch: 5, identity: 0.833

ttatccgtcatatatgcgccatgcttgcga	CRISPR spacer
gaatccgtcatatacgctccatgcttgcgg	Protospacer
  ************.** ***********.

18. spacer 4.7|672443|30|CP027241|PILER-CR matches to KX160212 (Lactococcus phage 98101, complete genome) position: , mismatch: 5, identity: 0.833

ttatccgtcatatatgcgccatgcttgcga	CRISPR spacer
gaatccgtcatatacgctccatgcttgcgg	Protospacer
  ************.** ***********.

19. spacer 4.7|672443|30|CP027241|PILER-CR matches to AF323670 (Bacteriophage bIL309, complete genome) position: , mismatch: 5, identity: 0.833

ttatccgtcatatatgcgccatgcttgcga	CRISPR spacer
gaatccgtcatatacgctccatgcttgcgg	Protospacer
  ************.** ***********.

20. spacer 4.7|672443|30|CP027241|PILER-CR matches to NC_002668 (Lactococcus prophage bIL309, complete genome) position: , mismatch: 5, identity: 0.833

ttatccgtcatatatgcgccatgcttgcga	CRISPR spacer
gaatccgtcatatacgctccatgcttgcgg	Protospacer
  ************.** ***********.

21. spacer 4.7|672443|30|CP027241|PILER-CR matches to KX160214 (Lactococcus phage 98103, complete genome) position: , mismatch: 5, identity: 0.833

ttatccgtcatatatgcgccatgcttgcga	CRISPR spacer
gaatccgtcatatacgctccatgcttgcgg	Protospacer
  ************.** ***********.

22. spacer 4.7|672443|30|CP027241|PILER-CR matches to KX160213 (Lactococcus phage 98102, complete genome) position: , mismatch: 5, identity: 0.833

ttatccgtcatatatgcgccatgcttgcga	CRISPR spacer
gaatccgtcatatacgctccatgcttgcgg	Protospacer
  ************.** ***********.

23. spacer 4.7|672443|30|CP027241|PILER-CR matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 5, identity: 0.833

ttatccgtcatatatgcgccatgcttgcga	CRISPR spacer
tgttcggtcatatatgcgccatgtttgcgg	Protospacer
*  ** *****************.*****.

24. spacer 4.7|672443|30|CP027241|PILER-CR matches to KJ564038 (Lactobacillus phage Ld3, complete genome) position: , mismatch: 5, identity: 0.833

ttatccgtcatatatgcgccatgcttgcga	CRISPR spacer
tggtctgtcatataagcgccatgcttgcgg	Protospacer
* .**.******** **************.

25. spacer 4.7|672443|30|CP027241|PILER-CR matches to KJ564036 (Lactobacillus phage Ld25A, complete genome) position: , mismatch: 5, identity: 0.833

ttatccgtcatatatgcgccatgcttgcga	CRISPR spacer
tggtctgtcatataagcgccatgcttgcgg	Protospacer
* .**.******** **************.

26. spacer 4.4|672511|28|CP027241|CRT matches to KC736071 (Mycobacterium phage WIVsmall, complete genome) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
ggaaatcaatctcgctatctggggtgat	Protospacer
 .  **************** **.****

27. spacer 4.4|672511|28|CP027241|CRT matches to HC001412 (Sequence 17 from Patent WO2009106635) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

28. spacer 4.4|672511|28|CP027241|CRT matches to HI551563 (Sequence 3 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

29. spacer 4.4|672511|28|CP027241|CRT matches to FJ881694 (Enterobacteria phage T7 RNA polymerase gene, complete cds) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

30. spacer 4.4|672511|28|CP027241|CRT matches to HI551621 (Sequence 61 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

31. spacer 4.4|672511|28|CP027241|CRT matches to LF398928 (JP 2014528730-A/1: RNA polymerase mutants) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

32. spacer 4.4|672511|28|CP027241|CRT matches to HI551583 (Sequence 23 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

33. spacer 4.4|672511|28|CP027241|CRT matches to HI551565 (Sequence 5 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

34. spacer 4.4|672511|28|CP027241|CRT matches to HW374671 (JP 2012223202-A/47: Conserved HBV and HCV Sequences Useful for Gene Silencing) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

35. spacer 4.4|672511|28|CP027241|CRT matches to HI551575 (Sequence 15 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

36. spacer 4.4|672511|28|CP027241|CRT matches to HI551579 (Sequence 19 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

37. spacer 4.4|672511|28|CP027241|CRT matches to HI551599 (Sequence 39 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

38. spacer 4.4|672511|28|CP027241|CRT matches to JA821311 (Sequence 47 from Patent EP2284268) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

39. spacer 4.4|672511|28|CP027241|CRT matches to HW805501 (JP 2015015955-A/8: CELLS AND METHODOLOGY TO GENERATE NON-SEGMENTED NEGATIVE-STRAND RNA VIRUSES) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

40. spacer 4.4|672511|28|CP027241|CRT matches to DQ100054 (Bacteriophage T7.1 section alpha sequence) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

41. spacer 4.4|672511|28|CP027241|CRT matches to LP718681 (Sequence 176 from Patent EP2885419) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

42. spacer 4.4|672511|28|CP027241|CRT matches to HI551607 (Sequence 47 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

43. spacer 4.4|672511|28|CP027241|CRT matches to HV235491 (JP 2009213497-A/1: Improved RNA Polymerase) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

44. spacer 4.4|672511|28|CP027241|CRT matches to HV701371 (JP 2012075418-A/5: Improved RNA polymerase mutant) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

45. spacer 4.4|672511|28|CP027241|CRT matches to HI551585 (Sequence 25 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

46. spacer 4.4|672511|28|CP027241|CRT matches to HI551577 (Sequence 17 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

47. spacer 4.4|672511|28|CP027241|CRT matches to HI551595 (Sequence 35 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

48. spacer 4.4|672511|28|CP027241|CRT matches to HI551619 (Sequence 59 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

49. spacer 4.4|672511|28|CP027241|CRT matches to HI551597 (Sequence 37 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

50. spacer 4.4|672511|28|CP027241|CRT matches to DM025976 (Conserved HBV and HCV Sequences Useful for Gene Silencing) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

51. spacer 4.4|672511|28|CP027241|CRT matches to E43997 (Improved RNA polymerase) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

52. spacer 4.4|672511|28|CP027241|CRT matches to HI551581 (Sequence 21 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

53. spacer 4.4|672511|28|CP027241|CRT matches to HI551571 (Sequence 11 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

54. spacer 4.4|672511|28|CP027241|CRT matches to HV547440 (JP 2011224013-A/47: Conserved HBV and HCV Sequences Useful for Gene Silencing) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

55. spacer 4.4|672511|28|CP027241|CRT matches to MP478605 (Sequence 40 from Patent WO2020012335) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

56. spacer 4.4|672511|28|CP027241|CRT matches to HI551593 (Sequence 33 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

57. spacer 4.4|672511|28|CP027241|CRT matches to AY264774 (Enterobacteria phage T7, complete genome) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

58. spacer 4.4|672511|28|CP027241|CRT matches to AY264775 (Enterobacteria phage T7 isolate K, complete genome) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

59. spacer 4.4|672511|28|CP027241|CRT matches to HI551615 (Sequence 55 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

60. spacer 4.4|672511|28|CP027241|CRT matches to HI551605 (Sequence 45 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

61. spacer 4.4|672511|28|CP027241|CRT matches to HI551611 (Sequence 51 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

62. spacer 4.4|672511|28|CP027241|CRT matches to HI551567 (Sequence 7 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

63. spacer 4.4|672511|28|CP027241|CRT matches to HV235493 (JP 2009213499-A/1: Improved RNA Polymerase) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

64. spacer 4.4|672511|28|CP027241|CRT matches to HI551561 (Sequence 1 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

65. spacer 4.4|672511|28|CP027241|CRT matches to MG833025 (Mutant Enterobacteria phage T7 strain T7Del1revsplitRNAP, complete genome) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

66. spacer 4.4|672511|28|CP027241|CRT matches to AY264776 (Enterobacteria phage T7 isolate K115, complete genome) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

67. spacer 4.4|672511|28|CP027241|CRT matches to CS086837 (Sequence 3 from Patent WO2005040388) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

68. spacer 4.4|672511|28|CP027241|CRT matches to V01127 (Left end of bacteriophage T7 genome. Includes the reading frames of the genes 0.3, 0.4, 0.5, 0.6, 0.65, 0.7, 1, 1.1, 1.2, 1.3 (early proteins) and 1.4, 1.5, 1.6, 1.7, 2, 2.5, 2.8, 3, 3.5, 4A and 4B (late proteins). Gene 1 is the T7 RNA polymerase) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

69. spacer 4.4|672511|28|CP027241|CRT matches to HI551569 (Sequence 9 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

70. spacer 4.4|672511|28|CP027241|CRT matches to DD451662 (Method for detecting the interaction of protein) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

71. spacer 4.4|672511|28|CP027241|CRT matches to HZ771599 (JP 2015003913-A/47: Conserved HBV and HCV Sequences Useful for Gene Silencing) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

72. spacer 4.4|672511|28|CP027241|CRT matches to HI551601 (Sequence 41 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

73. spacer 4.4|672511|28|CP027241|CRT matches to NC_042057 (Enterobacteria phage DE3, complete genome) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

74. spacer 4.4|672511|28|CP027241|CRT matches to HI551617 (Sequence 57 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

75. spacer 4.4|672511|28|CP027241|CRT matches to JA842209 (Sequence 47 from Patent EP2316942) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

76. spacer 4.4|672511|28|CP027241|CRT matches to AY264778 (Enterobacteria phage T7 isolate P82, complete genome) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

77. spacer 4.4|672511|28|CP027241|CRT matches to DM465311 (RNA Polymerase Mutant With Improved Function) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

78. spacer 4.4|672511|28|CP027241|CRT matches to M38308 (Bacteriophage T7 RNA polymerase gene, complete cds) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

79. spacer 4.4|672511|28|CP027241|CRT matches to HV703014 (JP 2012080889-A/2: Multiple-Compartment Eukaryotic Expression Systems) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

80. spacer 4.4|672511|28|CP027241|CRT matches to DM139659 (Compositions, Methods and Kits for Real-Time Nucleic Acid Analysis in Live Cells) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

81. spacer 4.4|672511|28|CP027241|CRT matches to HV703015 (JP 2012080889-A/3: Multiple-Compartment Eukaryotic Expression Systems) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

82. spacer 4.4|672511|28|CP027241|CRT matches to HI551587 (Sequence 27 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

83. spacer 4.4|672511|28|CP027241|CRT matches to GM604318 (Sequence 8 from Patent EP1939214) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

84. spacer 4.4|672511|28|CP027241|CRT matches to LQ979057 (Sequence 1 from Patent WO2013050609) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

85. spacer 4.4|672511|28|CP027241|CRT matches to HV235492 (JP 2009213498-A/1: Improved RNA Polymerase) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

86. spacer 4.4|672511|28|CP027241|CRT matches to AY264777 (Enterobacteria phage T7 isolate P, complete genome) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

87. spacer 4.4|672511|28|CP027241|CRT matches to HC768866 (Sequence 17 from Patent WO2010049807) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

88. spacer 4.4|672511|28|CP027241|CRT matches to GM677256 (Sequence 8 from Patent WO2008078198) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

89. spacer 4.4|672511|28|CP027241|CRT matches to CS038863 (Sequence 1 from Patent EP1512742) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

90. spacer 4.4|672511|28|CP027241|CRT matches to HV029889 (JP 2011051943-A/5: Protein extraction reagent and method for screening polymerase using the same) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

91. spacer 4.4|672511|28|CP027241|CRT matches to FW366198 (CELLS AND METHODOLOGY TO GENERATE NON-SEGMENTED NEGATIVE-STRAND RNA VIRUSES) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

92. spacer 4.4|672511|28|CP027241|CRT matches to HI551609 (Sequence 49 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

93. spacer 4.4|672511|28|CP027241|CRT matches to HW805502 (JP 2015015955-A/9: CELLS AND METHODOLOGY TO GENERATE NON-SEGMENTED NEGATIVE-STRAND RNA VIRUSES) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

94. spacer 4.4|672511|28|CP027241|CRT matches to HI551603 (Sequence 43 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

95. spacer 4.4|672511|28|CP027241|CRT matches to HI551591 (Sequence 31 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

96. spacer 4.4|672511|28|CP027241|CRT matches to HV701390 (JP 2012075418-A/24: Improved RNA polymerase mutant) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

97. spacer 4.4|672511|28|CP027241|CRT matches to FW343405 (Expression vector for multiple gene expression) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

98. spacer 4.4|672511|28|CP027241|CRT matches to V01146 (Genome of bacteriophage T7) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

99. spacer 4.4|672511|28|CP027241|CRT matches to LR745708 (Escherichia phage T7 genome assembly, chromosome: 1) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

100. spacer 4.4|672511|28|CP027241|CRT matches to HI551613 (Sequence 53 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

101. spacer 4.4|672511|28|CP027241|CRT matches to LY802968 (KR 1020200018071-A/1: Modified pT7/T7 polymerase system for sustainable shRNA expression in cytoplasm and liposome transporter comprising it) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

102. spacer 4.4|672511|28|CP027241|CRT matches to CS086836 (Sequence 2 from Patent WO2005040388) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

103. spacer 4.4|672511|28|CP027241|CRT matches to HI551589 (Sequence 29 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

104. spacer 4.4|672511|28|CP027241|CRT matches to GM604320 (Sequence 10 from Patent EP1939214) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

105. spacer 4.4|672511|28|CP027241|CRT matches to JA866434 (Sequence 47 from Patent EP2270162) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

106. spacer 4.4|672511|28|CP027241|CRT matches to LQ307592 (Sequence 177 from Patent WO2016049492) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

107. spacer 4.4|672511|28|CP027241|CRT matches to GM677258 (Sequence 10 from Patent WO2008078198) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

108. spacer 4.4|672511|28|CP027241|CRT matches to HI551573 (Sequence 13 from Patent EP2185716) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

109. spacer 4.4|672511|28|CP027241|CRT matches to DJ011524 (Multiple-Compartment Eukaryotic Expression Systems) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

110. spacer 4.4|672511|28|CP027241|CRT matches to LY802971 (KR 1020200018071-A/4: Modified pT7/T7 polymerase system for sustainable shRNA expression in cytoplasm and liposome transporter comprising it) position: , mismatch: 6, identity: 0.786

taccatcaatctcgctatcttggatgat	CRISPR spacer
gtgcatcaatctcgctatctttgttggt	Protospacer
   ****************** * **.*

111. spacer 4.8|672509|30|CP027241|PILER-CR matches to HC001412 (Sequence 17 from Patent WO2009106635) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

112. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551563 (Sequence 3 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

113. spacer 4.8|672509|30|CP027241|PILER-CR matches to FJ881694 (Enterobacteria phage T7 RNA polymerase gene, complete cds) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

114. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551621 (Sequence 61 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

115. spacer 4.8|672509|30|CP027241|PILER-CR matches to LF398928 (JP 2014528730-A/1: RNA polymerase mutants) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

116. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551583 (Sequence 23 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

117. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551565 (Sequence 5 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

118. spacer 4.8|672509|30|CP027241|PILER-CR matches to HW374671 (JP 2012223202-A/47: Conserved HBV and HCV Sequences Useful for Gene Silencing) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

119. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551575 (Sequence 15 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

120. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551579 (Sequence 19 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

121. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551599 (Sequence 39 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

122. spacer 4.8|672509|30|CP027241|PILER-CR matches to JA821311 (Sequence 47 from Patent EP2284268) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

123. spacer 4.8|672509|30|CP027241|PILER-CR matches to HW805501 (JP 2015015955-A/8: CELLS AND METHODOLOGY TO GENERATE NON-SEGMENTED NEGATIVE-STRAND RNA VIRUSES) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

124. spacer 4.8|672509|30|CP027241|PILER-CR matches to DQ100054 (Bacteriophage T7.1 section alpha sequence) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

125. spacer 4.8|672509|30|CP027241|PILER-CR matches to LP718681 (Sequence 176 from Patent EP2885419) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

126. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551607 (Sequence 47 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

127. spacer 4.8|672509|30|CP027241|PILER-CR matches to HV235491 (JP 2009213497-A/1: Improved RNA Polymerase) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

128. spacer 4.8|672509|30|CP027241|PILER-CR matches to HV701371 (JP 2012075418-A/5: Improved RNA polymerase mutant) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

129. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551585 (Sequence 25 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

130. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551577 (Sequence 17 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

131. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551595 (Sequence 35 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

132. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551619 (Sequence 59 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

133. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551597 (Sequence 37 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

134. spacer 4.8|672509|30|CP027241|PILER-CR matches to DM025976 (Conserved HBV and HCV Sequences Useful for Gene Silencing) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

135. spacer 4.8|672509|30|CP027241|PILER-CR matches to E43997 (Improved RNA polymerase) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

136. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551581 (Sequence 21 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

137. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551571 (Sequence 11 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

138. spacer 4.8|672509|30|CP027241|PILER-CR matches to HV547440 (JP 2011224013-A/47: Conserved HBV and HCV Sequences Useful for Gene Silencing) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

139. spacer 4.8|672509|30|CP027241|PILER-CR matches to MP478605 (Sequence 40 from Patent WO2020012335) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

140. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551593 (Sequence 33 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

141. spacer 4.8|672509|30|CP027241|PILER-CR matches to AY264774 (Enterobacteria phage T7, complete genome) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

142. spacer 4.8|672509|30|CP027241|PILER-CR matches to AY264775 (Enterobacteria phage T7 isolate K, complete genome) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

143. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551615 (Sequence 55 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

144. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551605 (Sequence 45 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

145. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551611 (Sequence 51 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

146. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551567 (Sequence 7 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

147. spacer 4.8|672509|30|CP027241|PILER-CR matches to HV235493 (JP 2009213499-A/1: Improved RNA Polymerase) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

148. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551561 (Sequence 1 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

149. spacer 4.8|672509|30|CP027241|PILER-CR matches to MG833025 (Mutant Enterobacteria phage T7 strain T7Del1revsplitRNAP, complete genome) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

150. spacer 4.8|672509|30|CP027241|PILER-CR matches to AY264776 (Enterobacteria phage T7 isolate K115, complete genome) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

151. spacer 4.8|672509|30|CP027241|PILER-CR matches to CS086837 (Sequence 3 from Patent WO2005040388) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

152. spacer 4.8|672509|30|CP027241|PILER-CR matches to V01127 (Left end of bacteriophage T7 genome. Includes the reading frames of the genes 0.3, 0.4, 0.5, 0.6, 0.65, 0.7, 1, 1.1, 1.2, 1.3 (early proteins) and 1.4, 1.5, 1.6, 1.7, 2, 2.5, 2.8, 3, 3.5, 4A and 4B (late proteins). Gene 1 is the T7 RNA polymerase) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

153. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551569 (Sequence 9 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

154. spacer 4.8|672509|30|CP027241|PILER-CR matches to DD451662 (Method for detecting the interaction of protein) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

155. spacer 4.8|672509|30|CP027241|PILER-CR matches to HZ771599 (JP 2015003913-A/47: Conserved HBV and HCV Sequences Useful for Gene Silencing) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

156. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551601 (Sequence 41 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

157. spacer 4.8|672509|30|CP027241|PILER-CR matches to NC_042057 (Enterobacteria phage DE3, complete genome) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

158. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551617 (Sequence 57 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

159. spacer 4.8|672509|30|CP027241|PILER-CR matches to JA842209 (Sequence 47 from Patent EP2316942) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

160. spacer 4.8|672509|30|CP027241|PILER-CR matches to AY264778 (Enterobacteria phage T7 isolate P82, complete genome) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

161. spacer 4.8|672509|30|CP027241|PILER-CR matches to DM465311 (RNA Polymerase Mutant With Improved Function) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

162. spacer 4.8|672509|30|CP027241|PILER-CR matches to M38308 (Bacteriophage T7 RNA polymerase gene, complete cds) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

163. spacer 4.8|672509|30|CP027241|PILER-CR matches to HV703014 (JP 2012080889-A/2: Multiple-Compartment Eukaryotic Expression Systems) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

164. spacer 4.8|672509|30|CP027241|PILER-CR matches to DM139659 (Compositions, Methods and Kits for Real-Time Nucleic Acid Analysis in Live Cells) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

165. spacer 4.8|672509|30|CP027241|PILER-CR matches to HV703015 (JP 2012080889-A/3: Multiple-Compartment Eukaryotic Expression Systems) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

166. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551587 (Sequence 27 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

167. spacer 4.8|672509|30|CP027241|PILER-CR matches to GM604318 (Sequence 8 from Patent EP1939214) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

168. spacer 4.8|672509|30|CP027241|PILER-CR matches to LQ979057 (Sequence 1 from Patent WO2013050609) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

169. spacer 4.8|672509|30|CP027241|PILER-CR matches to HV235492 (JP 2009213498-A/1: Improved RNA Polymerase) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

170. spacer 4.8|672509|30|CP027241|PILER-CR matches to AY264777 (Enterobacteria phage T7 isolate P, complete genome) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

171. spacer 4.8|672509|30|CP027241|PILER-CR matches to HC768866 (Sequence 17 from Patent WO2010049807) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

172. spacer 4.8|672509|30|CP027241|PILER-CR matches to GM677256 (Sequence 8 from Patent WO2008078198) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

173. spacer 4.8|672509|30|CP027241|PILER-CR matches to CS038863 (Sequence 1 from Patent EP1512742) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

174. spacer 4.8|672509|30|CP027241|PILER-CR matches to HV029889 (JP 2011051943-A/5: Protein extraction reagent and method for screening polymerase using the same) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

175. spacer 4.8|672509|30|CP027241|PILER-CR matches to FW366198 (CELLS AND METHODOLOGY TO GENERATE NON-SEGMENTED NEGATIVE-STRAND RNA VIRUSES) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

176. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551609 (Sequence 49 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

177. spacer 4.8|672509|30|CP027241|PILER-CR matches to HW805502 (JP 2015015955-A/9: CELLS AND METHODOLOGY TO GENERATE NON-SEGMENTED NEGATIVE-STRAND RNA VIRUSES) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

178. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551603 (Sequence 43 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

179. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551591 (Sequence 31 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

180. spacer 4.8|672509|30|CP027241|PILER-CR matches to HV701390 (JP 2012075418-A/24: Improved RNA polymerase mutant) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

181. spacer 4.8|672509|30|CP027241|PILER-CR matches to FW343405 (Expression vector for multiple gene expression) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

182. spacer 4.8|672509|30|CP027241|PILER-CR matches to V01146 (Genome of bacteriophage T7) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

183. spacer 4.8|672509|30|CP027241|PILER-CR matches to LR745708 (Escherichia phage T7 genome assembly, chromosome: 1) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

184. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551613 (Sequence 53 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

185. spacer 4.8|672509|30|CP027241|PILER-CR matches to LY802968 (KR 1020200018071-A/1: Modified pT7/T7 polymerase system for sustainable shRNA expression in cytoplasm and liposome transporter comprising it) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

186. spacer 4.8|672509|30|CP027241|PILER-CR matches to CS086836 (Sequence 2 from Patent WO2005040388) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

187. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551589 (Sequence 29 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

188. spacer 4.8|672509|30|CP027241|PILER-CR matches to GM604320 (Sequence 10 from Patent EP1939214) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

189. spacer 4.8|672509|30|CP027241|PILER-CR matches to JA866434 (Sequence 47 from Patent EP2270162) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

190. spacer 4.8|672509|30|CP027241|PILER-CR matches to LQ307592 (Sequence 177 from Patent WO2016049492) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

191. spacer 4.8|672509|30|CP027241|PILER-CR matches to GM677258 (Sequence 10 from Patent WO2008078198) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

192. spacer 4.8|672509|30|CP027241|PILER-CR matches to HI551573 (Sequence 13 from Patent EP2185716) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

193. spacer 4.8|672509|30|CP027241|PILER-CR matches to DJ011524 (Multiple-Compartment Eukaryotic Expression Systems) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

194. spacer 4.8|672509|30|CP027241|PILER-CR matches to LY802971 (KR 1020200018071-A/4: Modified pT7/T7 polymerase system for sustainable shRNA expression in cytoplasm and liposome transporter comprising it) position: , mismatch: 6, identity: 0.8

-tataccatcaatctcgctatcttggatgat	CRISPR spacer
gtgtg-catcaatctcgctatctttgttggt	Protospacer
 *.*. ****************** * **.*

195. spacer 4.4|672511|28|CP027241|CRT matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 7, identity: 0.75

taccatcaatctcgctatcttggatgat	CRISPR spacer
cggcatcaatctcgccatcctggatggg	Protospacer
.. ************.***.******. 

196. spacer 4.4|672511|28|CP027241|CRT matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 7, identity: 0.75

taccatcaatctcgctatcttggatgat	CRISPR spacer
cggcatcaatctcgccatcctggatggg	Protospacer
.. ************.***.******. 

197. spacer 4.8|672509|30|CP027241|PILER-CR matches to KC736071 (Mycobacterium phage WIVsmall, complete genome) position: , mismatch: 7, identity: 0.767

tataccatcaatctcgctatcttggatgat	CRISPR spacer
tcggaaatcaatctcgctatctggggtgat	Protospacer
*  .  **************** **.****

198. spacer 4.10|672444|36|CP027241|CRISPRCasFinder matches to KX160207 (Lactococcus phage 53801, complete genome) position: , mismatch: 7, identity: 0.806

tatccgtcatatatgcgccatgcttgcgagttttac	CRISPR spacer
tatccgtcatatacgctccatgcttgcggattgttg	Protospacer
*************.** ***********..** *  

199. spacer 4.10|672444|36|CP027241|CRISPRCasFinder matches to KX160215 (Lactococcus phage 98104, complete genome) position: , mismatch: 8, identity: 0.778

tatccgtcatatatgcgccatgcttgcgagttttac	CRISPR spacer
aatccgtcatatacgctccatgcttgcggattgttg	Protospacer
 ************.** ***********..** *  

200. spacer 4.10|672444|36|CP027241|CRISPRCasFinder matches to KX160205 (Lactococcus phage 49801, complete genome) position: , mismatch: 8, identity: 0.778

tatccgtcatatatgcgccatgcttgcgagttttac	CRISPR spacer
aatccgtcatatacgctccatgcttgcggattgttg	Protospacer
 ************.** ***********..** *  

201. spacer 4.10|672444|36|CP027241|CRISPRCasFinder matches to KX160212 (Lactococcus phage 98101, complete genome) position: , mismatch: 8, identity: 0.778

tatccgtcatatatgcgccatgcttgcgagttttac	CRISPR spacer
aatccgtcatatacgctccatgcttgcggattgttg	Protospacer
 ************.** ***********..** *  

202. spacer 4.10|672444|36|CP027241|CRISPRCasFinder matches to KX160214 (Lactococcus phage 98103, complete genome) position: , mismatch: 8, identity: 0.778

tatccgtcatatatgcgccatgcttgcgagttttac	CRISPR spacer
aatccgtcatatacgctccatgcttgcggattgttg	Protospacer
 ************.** ***********..** *  

203. spacer 4.10|672444|36|CP027241|CRISPRCasFinder matches to KX160213 (Lactococcus phage 98102, complete genome) position: , mismatch: 8, identity: 0.778

tatccgtcatatatgcgccatgcttgcgagttttac	CRISPR spacer
aatccgtcatatacgctccatgcttgcggattgttg	Protospacer
 ************.** ***********..** *  

204. spacer 4.8|672509|30|CP027241|PILER-CR matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 9, identity: 0.7

tataccatcaatctcgctatcttggatgat	CRISPR spacer
agcggcatcaatctcgccatcctggatggg	Protospacer
 ... ************.***.******. 

205. spacer 4.8|672509|30|CP027241|PILER-CR matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 9, identity: 0.7

tataccatcaatctcgctatcttggatgat	CRISPR spacer
agcggcatcaatctcgccatcctggatggg	Protospacer
 ... ************.***.******. 

206. spacer 4.10|672444|36|CP027241|CRISPRCasFinder matches to AF323670 (Bacteriophage bIL309, complete genome) position: , mismatch: 9, identity: 0.75

tatccgtcatatatgcgccatgcttgcgagttttac	CRISPR spacer
aatccgtcatatacgctccatgcttgcggatagtcg	Protospacer
 ************.** ***********..*  *  

207. spacer 4.10|672444|36|CP027241|CRISPRCasFinder matches to NC_002668 (Lactococcus prophage bIL309, complete genome) position: , mismatch: 9, identity: 0.75

tatccgtcatatatgcgccatgcttgcgagttttac	CRISPR spacer
aatccgtcatatacgctccatgcttgcggatagtcg	Protospacer
 ************.** ***********..*  *  

208. spacer 4.10|672444|36|CP027241|CRISPRCasFinder matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 10, identity: 0.722

tatccgtcatatatgcgccatgcttgcgagttttac	CRISPR spacer
gttcggtcatatatgcgccatgtttgcggattgatg	Protospacer
  ** *****************.*****..**    

209. spacer 4.10|672444|36|CP027241|CRISPRCasFinder matches to KJ564038 (Lactobacillus phage Ld3, complete genome) position: , mismatch: 11, identity: 0.694

tatccgtcatatatgcgccatgcttgcgagttttac	CRISPR spacer
ggtctgtcatataagcgccatgcttgcggatagcgg	Protospacer
 .**.******** **************..*  .. 

210. spacer 4.10|672444|36|CP027241|CRISPRCasFinder matches to KJ564036 (Lactobacillus phage Ld25A, complete genome) position: , mismatch: 11, identity: 0.694

tatccgtcatatatgcgccatgcttgcgagttttac	CRISPR spacer
ggtctgtcatataagcgccatgcttgcggatagcgg	Protospacer
 .**.******** **************..*  .. 

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	23479 : 32219	9	Streptococcus_phage(33.33%)	NA	NA
DBSCAN-SWA_2	1309179 : 1318126	6	Bacillus_phage(50.0%)	NA	NA
DBSCAN-SWA_3	1436714 : 1452880	18	Streptococcus_phage(100.0%)	integrase	attL 1436415:1436430|attR 1447270:1447285
DBSCAN-SWA_4	1579540 : 1590516	13	Deep-sea_thermophilic_phage(37.5%)	tail	NA
DBSCAN-SWA_5	2399613 : 2408436	8	Clostridium_phage(66.67%)	portal,tail	NA
DBSCAN-SWA_6	2412211 : 2422485	11	Bacillus_phage(22.22%)	portal	NA
DBSCAN-SWA_7	2425656 : 2435554	18	Clostridium_phage(42.86%)	NA	NA
DBSCAN-SWA_8	2707167 : 2716640	6	Synechococcus_phage(33.33%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>CP027241|23479:32219|DBSCAN-SWA
ATCAACTTCTATCACCTCCGTTTAGTAATCGTTCTTTATTTCGGTTTAACTTCTCTTTTTGAATCATCTTCCTGTAATCTTCTCCGACAACCATCACCGGAATACACATCTCAATAATCCTTGAGTAAATACGCTGATATTCCACACTTTCTGTGCAGTTTGAAATGGTGTCGTAGGAAAGATTGGTTGTAAATATGGTCGGTTTTTGTTTCAGGTATCTGTTATTGACAATGTTATAGACCTGTTCTTTGGCATAGCTGGTATCTCTTTCTATTCCCAAATCATCTAAGATGAGAACGGAAGTATTTACAAGCGATTCGATATACTCATTTTTATCAAAATCAAATCCGCTTTTTTGAAGATTGTTGATTATCTGAGCAAAGTTTCTTATCTTTACACTTATCTGATACTGCTCTATGAGTGCATTGGCAATGGAGCAGGCAAGATATGTTTTTCCGCTTCCGACTGAACCATAGAATAACAGTCCGATATTTTCCTTTTTCATCTCCTCATACTCTTTTACAAAGTTTTTTGCAATGGTAAGACTCTGATTTTCCTCTCCTTGATAATTATCAAAGGTATATGACCACTGAATAAGGGAGGCAAAACAACTTCTTTTTAATCGCTCAATCTCCATCTGCTTTTCTCTTGCCTTTTGTTTGGCTTCTCTGTCTCTGTCGCACTTGCAGGAAACTTTGTAGATTCTCTTTTTACCAAGCATCTCTAAGGCTTTTCCATCTTTTCTTTCATGACAGTTCTTGCAATAGGCGTGTCCGTCTTTGATATATTCTCTTTCCGGATCGTAGGAATACTCGGTATCCTCAATCATTATTCTTTTCATCTCACTCATCATAAATGCTCTCCTTTGTCATATTCTGCCCATGTCGGGATATTGGATGGCTTATCCGCTTTCTTAGTTCCCTGATCCTTATAAAACCATGAAAGGATTGTTGCCTTATGGTCTTTATATGTCTTTCCGGTACTTTTGATATACGCTGACAACCGTTGAATGTAGTTGTCAAATTGATAGCCTAATATCTCCTTTAGTTCTTTTGTTTCTTTTTCTGTGAGAAATACATTTTGAAATGTGCCAAGTCCGGTTTGCCCCTTACTAAAATCAGTATTACTATAATCAGGTTTATTTATATTAGTATTACTACTGTGTAGATTCTTCACTTCTTGAAGTGTAATTTCTACATTTCTGGAGTGTAAATTCTTCACTTCTGAAGTGTAATTTTTACACTCGAAACGAAACACACTCATAAAGTCTTTCACATAAATGATGTTCGGCTTTCCAAGTCCCTGTCTTTTTCTCTCAATCAGTCCGATTCCCTTTGTGTTGGCATCAAGCTCATTTAGAATCTTTACCGCTGTTTTATTCGACTTGTTTAGCATCTTCATGATTTCTTCGACGGTAAACACGATGTAAACTCTACCTTGCTCGTCAATCCAATCATTTTTGAATGACAGACTTGAACGCTCTAATAAACAGGCATAGAGTATTTTGGCATCGGAAGATAAATTTTTATATAAATCTTCGGTTACCAAAACCTTGGGTAACATATAAAAGCTAAATCTCTCCGTATCCCGATTATAGAAATAATCAAAGTCCATCTTTCACCCCCTCCCTTCTTTAAAATTTCCACTAAAAAAGACGATAGTTTTATCTATCGCCTTTGGTAACCATTTTTATGAAATTTTTTAGATTGATTTTATCGCTTCATTGATTCCTTGTATAAAAGCTATGATTGCTGCTCCAATCATCGGTATTCCGTAAGGACTTAGCAGAAATCCAAGGATAAGTGCTTCTATTGCTGCTTTTGTATCGTGTAGCATAAAGAACGAGCCTATGGCAACAAATACACACATCAGCATAAGCAAATATAGGATTGCAGTTCCTACGCTAAGCAAGAATGTCAGAAAGGCAGTCAAAATGCTTAACAGCAAACTGATTGGGAACAAGATTATTTTTATTATCCATCTCATAAAACTCTCACCTTCCTTGTATCAGAAAGGCTGATGTAATGGCTTGAAATATTTTTACATACCATAAATGCCTCCTTTTAGACCTGATTGTTTGATTTTTACAATTTTAAAAATAAGGATACAGTGCTGAAAGCCCCGAATTATCAAGCTTTTTTCTCTGTATCCCTATTATATCTCAAGCCCACCTCGTATGTGTTAAACTATTTTGTCCATTGGACACCTCCTTTTGATATTCTTATGCGGTTTGCAGACCTGCATTCATTATATCATTGGAGGTTTTTTGCTTGAAGCTAAAGCTTCCTTCTCCCCCAGCACAGCTGGGGGGGTTTTTGTTGCTAAAGCATACCAAAAATGCGCCCGCCCGAAAAAACGGACAAGCGCATAAACAATTTATTTTTCTGTTATACTCCGCCGGGAAAGTTGCGTGATTAGTTCTCCTCTCCCTCTTTCAAATGCTTTTTCAATATAATATACCCCAGATAAATCCCTGCTAACGCCAGCACAAAAGTAATAAATGTCGCCAGCACACCCATAATTCCTTGCGTGAATTTAATCTGAGCGTCCATCATTTCCGCCGTCATTCCGGCTCGGCCAACCCAGTGCGCCTTGTACTGCTCCAGGAAAAACCAAGATGGAACAATCGCGCCCCAAGCCTGTCCTACATGCATCAAACCGGATGCCAGCGCCAGTTTCCATACCTTGACAGTTTTGCCATCCCTGGAAGCAATAAAATCAGCCACTGCCGCCATAACCAGCGAACTGATTACCCATGGGAGATATCCGCCGCCCAGCAGCCAAAATATTACCATCAAAATACCTGTCATCAGCGTAAACTGCCACATCTTGCCTACTTTTCTGGAAAGAAAAACAATCACCGCACCGGCAAGCAGTCCGCAGGCTCCCGGACTGATGGCATGGCCGAACGGGCCAAGCGGTGTAATTACAGCCATTGCTATCATATAAAACACCATATACAATGCCGTCAGCAATGCAACAGTTACCACATCTTTCATTTTAAAATTATTTTTCATCTTGTCCTCCAAAATTAGTTTAAGTTTTATATTGCAGCATAAATGCCTTGCAGTTTTTGCCATACCTGCCTGCATTCCTATTGGGCGCCGCTTCAGCGCCGATAAATTATAAAGTCTTGCCTTATAGGCGTGATATGCGTTCCTGCTTTATAATGCTGCCGCCATATTTTCAAATATCCCGTTCAGTTCCGGCAAAGTATCGTCTTTCAGCGCAAAGTCTTTCTCAATTTTTCCGGCCTTAAGGTAAATAATCCGATTGGCCACATTTCTGATAAATTCATAGTCATGGGATATCACCAAAATCGCAGCGCTTTCTTTTAATCTTATGATTTCCGCCGCTACCTTTTTCATCGAAGCAATATCCAATCCGCTGGTCGGCTCGTCAAAAAGAATCACCGGCTTTTGACAAAGCACAGCCATACCAATCTGGAGCCGCTGTTTCTGTCCGCCGCTTAAATCAAAAGGATGTTTATGCCGGTAATCATACAGCCCCAAGTACTTAAGAGTATCTTCAATCGCGGTTTTATCATTGGTGACCAACGCCAGCTCATTAAAAACCGAAGTGCCGAACAGCTGAAAATCCGGATCCTGCATGATATAAAACGGCAGTTCATCTGCTTTAATCTCGCCCTTATCCGGTTTTAGACTCCGGCATAAGAGTTTGGCTATCGTCGTTTTCCCGGCTCCGTTATTCCCGACCAGGACGCTGACTTCCCCTTTTTGAAGTTCTATATTGATATCTTTTAAAACATTCTTATAGCTGACATTCTCAAGGCAGGCCACCTTCTCACCAGCCGGGCCGCTCTCCGGCGCAGGTACATCCAGTTCAAACAGTGCAAAGCTTCTGGTGTCATATTCACTTTGTTTAAATTCCATTTCGCTTGGAAAGCATCTTAATTTGCCGTTTTCCATTAGAAAAACCCGATCAATCAGCCCTTTCAAATAATAAAACCGATGATCGGCCACTATCACAGTAAAGCCGGCCTCCCTCATTTCCGCAATAATCTTTCCCAATTTGATCGCATTTCCATAGTCCAGATTGGCTGACGGCTCATCAAAAATGACCACCTTTTGGTTGAGTGCCATGGCGGAAGCCAGCGCTAAGAGTTGTCTTTCCCCGCTGGATATTTCAAAAATATTTCGATCCAAAAGCGAATGAAGCCCGAACTTTTCCGTCAAAGCGGTCAGTCTTTCGTCCATAAGCTCTTTTTTCAATCCATAATTTTCCATCGGAAAAACCAATTCCGCCGTGGAATTGGTCGTAAAGAACTGGCTTCTCGGGTTCTGAAAAACCGATCCTATCTTTTGGTTCAGTTCAAACATTTTAAGCTCACTATATTTTTTATCTTCAAAATACAGCGCTCCGTTTAACCTGCCCTCTATCGTTTCCGGAATCAGACCGTTAAGGCATTTGAGCAAAGTAGATTTGCCGCTGCCGCTGTCCCCGGCCAGCAAAATAACCTCGCTGCCTTTAATGGAAAAATCAACATCCTTTATGCCGTCTTTTGACTGTTCATACCAAAAATCCAGCTTTTCAGCCCTTATCATCTCGTCCATAATCCTGCCCACACAATCCCAATTATTAGTATCATCAGCAGCAAAGCATCACTTGTTCTAAACTTCTGTTCATAATAAGAAGTTCTTTTAATATCGGCGTCGATTCCTTTGACCAGTCCGGCCGAGGTTACTTCCTCCGCCAAGGCGGCACACCGGAAAAGCTGCGGCACCACAAAGTATTGAAAACTCTCTACCGGCCGTCTCCAAGTAAATGCAATCCCTCTTAGCCGCATCGACTCCTTTATATAGCCAAACTCCCGCTTAAAAGTCGGTATATAGCGCAGCGTGATAATCACTGCTACCACTAAGCTTCTTGGCAGCGGCAGCTTTTCCAGCGTTGACAGCAGCTCGGCCGTGGTATAATCCTTAAACAGAATAGTCGCCATCATCAAACATGGCAAGAACTGCATCAATATACTTAAAAACACAAGCGCATAGCCTGCCGGAATAATATCCATGAAAACAATACAGCCTGCCGCCTCTGCCGCGTATATCGCCATAAATATCAGCGCCCTTTTAACCTTGCCTGCCAGCAGCAGCACCAGCGAGGCAAACGCCATCAGAATGTAATTAAGCGGAAAAGCCGCCATAAATATAAACAGTGTCGGTATCAGGATATTAAAAAATAAAACCAGTGACGGATTTATTTTTATTGCTTTCACTTTCATAAAGTTCCTCGACATACTTTGTTGACAGCACAAGTTTCAAATTACTCTCTTCCCCTTCCCTGATTGGACAGAACCATCTTTTTAGGCTGGTTAGCCGTTCGTGCAGAAACACACCGTTTCAGCATGAAAAAGGAAGGTTAGTTAATACTAACTTAAAACAGTCTACTCTTTTTTAGGCATTTCGTCAAGGAAAATATTTTAGTTTGGCAGCTTATCCTCTGGCCTTAAAATCCTGGTCAATTTCCTCTTTCCACACCCCTTCGGCAAAAACAGAGCCGATTTGAGCGGAAGGGCAGCGTCTGGCACAGGATACCGCTTTTTCCAATACTCGATAATTAAGTGCCGTCCCCTTGGCATCGCTGTAGAAATTAGCCGCCCGATCCCGGTCAATGCCCATACCCTCGGCTGCTTTGATCGCGTCAATATTCGCTCCCAGAAAAAGGAATTCCCAGTTATGTTTCTTTTTCTGACGCTCAATCATTTTCTTAACCTTGTCAACACTGTATTTGGTACTGGCATTTTCCAGCCCGTCGGTCGTAATGACAAACAGTGTCTTGGCCGGCCGGTCTTCTTTTCTGGCATGTTTATGAATATTGCCGATATGATGAATCGCTCCGCCAACCGCATCCAGCAGCGCCGTACATCCTCTGACATAGTACTCTTTTTCGGTTAACTTCGGCACATCGCCAATCTTTATCCGGTCATGAATGACATCACAGGCATCATCAAATAAAACCGTTGAAACAATCGCTTCTCCCGCTTCCTTTTGCTGTTTCCCGATCAGCGAATTAAAACCGCCAATCGTATCCGACTCCAGGCCGCTCATCGATCCGCTTCTGTCCAGAATAAACACAAGTTCCGTTAAATTTTCTCTCATAATAAATCCCTCCGTAAACTGGCTGCAGCGTAAGCTGCGGTTTTGTTAGCTTCTGAGATTATTATAAACTTATGAGCAAATATTCGGTCACTTGTCAGGCGACATATTGCCCCCAGTTCAGGCAAGCGAATAATTCTATTAGCGCTTTAAGAGGCCTGCGTCCCCAAGAGCGGCTCGCCATGCTCAAACAGCGCCACATTGATTTCATAAATATCGTATGCCTCTCTTTCAATAAAATACTGCACGATGACATCCTGCTTGCTGCATGGCGATAACGCCAGTCCCGCCCTTGACAGCAAATCTCTGGTATCGTCCAAATTAAGCCGCAGCGCAATCGCCAGCGCTAAGGCCGTGGCTTTGCTTGGATTTTTGGTAGTGCCGCACTTTAACTTAGAAAAAGCTTTTCGGTCCAAATTGGCTTTTTTCTGGACTTCCACATCGCTCATGCCTTTGGCATCGGCAAAGGAAAATACCAGTTCCATAAAGGTTTTATCCAGATTATTAACCACATCGTCAAGGCTTCTTGCCGCCGAAGCCTTACAGGCCGGCTCCGCTGCGACTAACTCAGCCATGACCTCATTACTCACTTTACCCAGTTTGGGGCTTTCCCGTCTGGCTTTCCTGTCTCTGACCGCTTCCGCCATGCCGCCGGTAAGCTCCCGAAAAATCCTGCTCGCCGCCGGCAGCGGCGGAGTCAGCCACCGCTGCTGACTTGAAACATGCCTGCCATACTCCTCTGCTTCCTGTTCGGCCGCGTAATTATCATTAATATAAGCGTCAATATCGCCATATAATTCCGCAGACAGGGAAAAAGCCTTACGGTCAAAGACGACCAGAAAAATTCCCATATCATGCTCCGCCAGACAGCGTTCAATCTCTGACAGCGCGATTCTTAAAGCAATCCCCTTGGGAAACCCATAGTGGCCGGATGCTAATAAAGGAATGGCCAGGCTCTCTATTTCATGTTCAGCCGCCAGTTGAAACGCGCTTTTATAGCAACTGCGGATAATTTCTTCCTCACCCGCATTTCCCCCTTGCCAAGCTGTCCCGGCGGTATGAATAATATATTTAGCCGGCAGTCCATATCCGGGAGTAATGACGGATGTGCCCGGCTTAATAGTGCCAATCTCCTGTCTTTTGGCCAGCAGTTCTTTTTCGCCGGCGGCCTGATAAACCGCCGTATCAACTCCGGCACCGTACCCGGGCATGGGATTGGCGGTATTAACAATCGCGTCAACCTGCATTTTCGTAATATCATTGCGGACGATTTGAAACGGCATGATACACTCCTTTCCGTAAAACGATACCCTAATCTATCTTGCTAAGAGGATGCTAGTTTTATCATACCGTAAAATTCAAAAATTGAAAAGAGCCAACCCAATTTTGACCTAAGCGCTTAGGCAATACAGCGGCATATCATAATTTTATCATCAAAAGGCTTCACTCCCTATTGACGCAAATCAATAGCCGGATAATGTTTTGAACGGCCTGATACAAAAAGTCATTTCCCTTGCGCATGGCTTCCTCCAACGTTACCGGCCGGTTGATAATGCTAAACGCCGCGCTTAACCCGCGGTTATAAAGTTCCTCATAATCTTCTCCGAGCGAACCCACGACGGCAATAACGGGAATACTATATTTTTTTCCCAAAAGGGCAATGCCGTTCGGCAGCTTGCCAAATAAGGTTTGCCGGTTCATTTGCCCTTCGCCGGTAATAATCAAATCATAGTTTTCTGTTGCGATTTTGCGCTCCACTTCAATTACCTGACTGATTAACTGAAAGCCCGGCTCTAACCGGCAGTTTAAAAAACTCAAAAAAGCAAAACCCAGACCACCGGCCGCTCCGGCTCCGGCGGCAGCCGCTTCTTTTTTACCGGTAAAGCTTTCCACCTGACGGGCATAATTTTTCATGCCGCTTTCCAGCCGGTCAAGCGCTTCTGAATCCGCTCCTTTTTGCGGCCCGTAAATATAAGTCGCTCCGTCTTTGCCCACTAACGGGTTTTCAACATCACAGGCAATTCGGAACAAAACCGAGCCCAGCCCGGCCGGCACCTTTTGACCGGCAATGCGACAGACCGAGCCTAATTCCTGACCGTGTCCGCTTAACTCATTTCCATTTTCATCAAAAAATTGATAACCTAAGGCCGAAAGCATTCCCATGCCACCGTCATTGGTCGCGCTGCCGCCGATACCCATAATGATTTCCCGGCAGCCATGCTCAATCGCATCCAAAATCATCTCCCCAACACCATAAGATGTGGTCTGTTCGGGGTTTCTTCGCTCCGGCGGAACCAGATCCAGTCCGGCCGCTTCAGCCATCTCCATAATCGCCGTTTTCCCGTCCGGCAAAACCCCATATCGGGCAACATGCGCCTCCCCCAGCGGATTGCGAACCTGACATTCGCGTATTTTGCCGCCTACATTATAAATAACGGCTGCTACCGTGCCCTCGCCTCCGTCTGCAAGCGGCAGAGTATCGATCCTGCACTCCGGAGCAATCTCGGCAATGGCGGCTTTCGCCGTCTCACAAAATTCCCTGGCACTGATGCTCCCCTTAAAAGAATCCGGCGCAATCAGAACTTTTTTCCGAAATTCACTTTTACTCATGCTGCTCATCTCCAT

Protein sequences of DBSCAN-SWA_1

>CP027241|23479:32219|25892_26495_-|AVM67816.1|DBSCAN-SWA
MKNNFKMKDVVTVALLTALYMVFYMIAMAVITPLGPFGHAISPGACGLLAGAVIVFLSRKVGKMWQFTLMTGILMVIFWLLGGGYLPWVISSLVMAAVADFIASRDGKTVKVWKLALASGLMHVGQAWGAIVPSWFFLEQYKAHWVGRAGMTAEMMDAQIKFTQGIMGVLATFITFVLALAGIYLGYIILKKHLKEGEEN
>CP027241|23479:32219|24327_25092_-|AVM67814.1|DBSCAN-SWA
MDFDYFYNRDTERFSFYMLPKVLVTEDLYKNLSSDAKILYACLLERSSLSFKNDWIDEQGRVYIVFTVEEIMKMLNKSNKTAVKILNELDANTKGIGLIERKRQGLGKPNIIYVKDFMSVFRFECKNYTSEVKNLHSRNVEITLQEVKNLHSSNTNINKPDYSNTDFSKGQTGLGTFQNVFLTEKETKELKEILGYQFDNYIQRLSAYIKSTGKTYKDHKATILSWFYKDQGTKKADKPSNIPTWAEYDKGEHL
>CP027241|23479:32219|28039_28735_-|AVM67818.1|DBSCAN-SWA
MSRNFMKVKAIKINPSLVLFFNILIPTLFIFMAAFPLNYILMAFASLVLLLAGKVKRALIFMAIYAAEAAGCIVFMDIIPAGYALVFLSILMQFLPCLMMATILFKDYTTAELLSTLEKLPLPRSLVVAVIITLRYIPTFKREFGYIKESMRLRGIAFTWRRPVESFQYFVVPQLFRCAALAEEVTSAGLVKGIDADIKRTSYYEQKFRTSDALLLMILIIGIVWAGLWTR
>CP027241|23479:32219|26642_28052_-|AVM67817.1|DBSCAN-SWA
MDEMIRAEKLDFWYEQSKDGIKDVDFSIKGSEVILLAGDSGSGKSTLLKCLNGLIPETIEGRLNGALYFEDKKYSELKMFELNQKIGSVFQNPRSQFFTTNSTAELVFPMENYGLKKELMDERLTALTEKFGLHSLLDRNIFEISSGERQLLALASAMALNQKVVIFDEPSANLDYGNAIKLGKIIAEMREAGFTVIVADHRFYYLKGLIDRVFLMENGKLRCFPSEMEFKQSEYDTRSFALFELDVPAPESGPAGEKVACLENVSYKNVLKDINIELQKGEVSVLVGNNGAGKTTIAKLLCRSLKPDKGEIKADELPFYIMQDPDFQLFGTSVFNELALVTNDKTAIEDTLKYLGLYDYRHKHPFDLSGGQKQRLQIGMAVLCQKPVILFDEPTSGLDIASMKKVAAEIIRLKESAAILVISHDYEFIRNVANRIIYLKAGKIEKDFALKDDTLPELNGIFENMAAAL
>CP027241|23479:32219|23479_24331_-|AVM67813.1|DBSCAN-SWA
MMSEMKRIMIEDTEYSYDPEREYIKDGHAYCKNCHERKDGKALEMLGKKRIYKVSCKCDRDREAKQKAREKQMEIERLKRSCFASLIQWSYTFDNYQGEENQSLTIAKNFVKEYEEMKKENIGLLFYGSVGSGKTYLACSIANALIEQYQISVKIRNFAQIINNLQKSGFDFDKNEYIESLVNTSVLILDDLGIERDTSYAKEQVYNIVNNRYLKQKPTIFTTNLSYDTISNCTESVEYQRIYSRIIEMCIPVMVVGEDYRKMIQKEKLNRNKERLLNGGDRS
>CP027241|23479:32219|31037_32219_-|AVM67821.1|DBSCAN-SWA
MEMSSMSKSEFRKKVLIAPDSFKGSISAREFCETAKAAIAEIAPECRIDTLPLADGGEGTVAAVIYNVGGKIRECQVRNPLGEAHVARYGVLPDGKTAIMEMAEAAGLDLVPPERRNPEQTTSYGVGEMILDAIEHGCREIIMGIGGSATNDGGMGMLSALGYQFFDENGNELSGHGQELGSVCRIAGQKVPAGLGSVLFRIACDVENPLVGKDGATYIYGPQKGADSEALDRLESGMKNYARQVESFTGKKEAAAAGAGAAGGLGFAFLSFLNCRLEPGFQLISQVIEVERKIATENYDLIITGEGQMNRQTLFGKLPNGIALLGKKYSIPVIAVVGSLGEDYEELYNRGLSAAFSIINRPVTLEEAMRKGNDFLYQAVQNIIRLLICVNRE
>CP027241|23479:32219|25179_25464_-|AVM67815.1|DBSCAN-SWA
MRWIIKIILFPISLLLSILTAFLTFLLSVGTAILYLLMLMCVFVAIGSFFMLHDTKAAIEALILGFLLSPYGIPMIGAAIIAFIQGINEAIKSI
>CP027241|23479:32219|29743_30877_-|AVM67820.1|DBSCAN-SWA
MPFQIVRNDITKMQVDAIVNTANPMPGYGAGVDTAVYQAAGEKELLAKRQEIGTIKPGTSVITPGYGLPAKYIIHTAGTAWQGGNAGEEEIIRSCYKSAFQLAAEHEIESLAIPLLASGHYGFPKGIALRIALSEIERCLAEHDMGIFLVVFDRKAFSLSAELYGDIDAYINDNYAAEQEAEEYGRHVSSQQRWLTPPLPAASRIFRELTGGMAEAVRDRKARRESPKLGKVSNEVMAELVAAEPACKASAARSLDDVVNNLDKTFMELVFSFADAKGMSDVEVQKKANLDRKAFSKLKCGTTKNPSKATALALAIALRLNLDDTRDLLSRAGLALSPCSKQDVIVQYFIEREAYDIYEINVALFEHGEPLLGTQAS
>CP027241|23479:32219|28931_29597_-|AVM67819.1|DBSCAN-SWA
MRENLTELVFILDRSGSMSGLESDTIGGFNSLIGKQQKEAGEAIVSTVLFDDACDVIHDRIKIGDVPKLTEKEYYVRGCTALLDAVGGAIHHIGNIHKHARKEDRPAKTLFVITTDGLENASTKYSVDKVKKMIERQKKKHNWEFLFLGANIDAIKAAEGMGIDRDRAANFYSDAKGTALNYRVLEKAVSCARRCPSAQIGSVFAEGVWKEEIDQDFKARG

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVM67813.1|23479_24331_-	nucleoside triphosphate hydrolase	H7BWC4	unidentified_phage	2.2e-38	38.1
AVM67814.1|24327_25092_-	replication initiation protein	A0A286QTB6	Streptococcus_phage	2.9e-18	42.7
AVM67815.1|25179_25464_-	hypothetical protein	NA	NA	NA	NA
AVM67816.1|25892_26495_-	hypothetical protein	NA	NA	NA	NA
AVM67817.1|26642_28052_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.2e-18	33.5
AVM67818.1|28039_28735_-	hypothetical protein	NA	NA	NA	NA
AVM67819.1|28931_29597_-	hypothetical protein	A0A292GAU5	Xanthomonas_phage	2.2e-33	38.3
AVM67820.1|29743_30877_-	RNase III inhibitor	Q9YJX6	Sindbis-like_virus	9.1e-08	29.9
AVM67821.1|31037_32219_-	glycerate kinase	W6LM47	Streptococcus_phage	1.6e-42	35.3

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>CP027241|1309179:1318126|DBSCAN-SWA
CATGGAGCTAAAAGAAGTAAAAGTCAGGAAAAAAGATTCAACCCTGCAGCCGTTTACTGCCGAGAAGATTGTGGCGGCGGTTAAAAAGTCGGCCGACCGGGTTTTGGTTAAGTTTACTGCGGAAGAAGAAAGAGAAATTGTCGGGCTGGTGACGGAAAAGATTCTGCATTTGAATACCAATATTGTACCGATTGAAACCATGCACAACTTTGTCGAATATGCATTGGATAAGGTCAATCCGGCAGTGGCCAAGTCGTACCGGGAATACCGCAACTATAAGATTGACTTTGTCAATATGCTGGATGATGTTTACCGCAAATCACAGAAGGTACGTTATATCGGTGATAAGGAAAACTCCAATACCGATTCGGCGCTGGTGGCGACCAAGCGGAGTCTGATTTATAATCAGCTGAACAAAGAGCTTTATCAGAAGTTTTTCCTGAACAAGGAAGAAAGAAGCGCCATTCGGGCGGGCTATATTTATATTCATGATATGGTCAGCCGTCTGGACACCATGAACTGCTGTTTATTTGATATGAAAGCGGTTCTGACCGGCGGCTTTGAAATGGCCAATATCTGGTATAATGAGCCGAAAACTTTGGATACTGCCTTTGACGTCATCGGCGATATTGTGCTGTCAACGGCCGCACAGCAGTACGGCGGCTTTACCATCGGGGAGCTGGATAAGATTTTGGCGCCTTATGCGGAAAAGAGTTATAAAAAGTATTTGTTTGATTACAGTGATATGATTGTCGGCGAGATGACGCCGGAGCAACGGCAGAGAATTGAAGAAAAGGTATTGGCCAAGGTTCGCCGTGACATGGAACAGGGTTTTCAGGGAATTGAGTACAAGCTCAATACTGTCGGCAGCAGCCGGGGCGATTATCCGTTTATTACGATTACAGCGGGACTGGCAACCGACCGCTGGGGAAAACTGGCGACCGAATGCATGCTGCGTGTGCATATGGGCGGTCAGGGCAAGGCAGGCTTTAAAAAACCGGTGCTTTTCCCGAAAATTGTTTTCCTTTATGATGAAGAACTGCATGGCGAAGGTAAGGAGCTGGAGGATATTTTTGAACTGGCGATTGAGTGTTCCTCCAAAACAATGTATCCCGATTTCCTGAGCCTGACCGGCGAGGGCTATGTAGCGGAGATGTATAAGAAGTATAAGAAGGTGGTCTCGCCGATGGGCTGCCGCGCTTTTTTAAGTCCGTGGTATGAGCGGGGCGGGATGAAACCGGCTGATGAAAATGATGTGCCGATCTTTACCGGTCGCTGGAATGGCGGAGCCATCAGCCTGCATTTGCCGATGATTTATGCCAAGGCGAAGGAAGAAGGAAAGGATTTTTATGAGGTGCTGGATTATTATCTGCAAATGATTCGTACCCTTCATCAAAAAACCTATGAATATTTGGGGAACCTCAGGGCATCGGTCAATCCGCTGGCTTTTTGCGAGGGCGGTTTTTACCAGGGCCGGCTGAAGCACTCCGATAAAATCCGGCCGATTCTGCCGGCGGTGACGTTTTCCTTTGGTATTACCGCACTGAACGAGCTGCAGCAGATCCATAACGGCAAATCGCTGCGTGAGGATGCGGAGTTTGCGCTGGAAGTAATGGAGTATATTAACAAAAAAGCGCAGGAGTTTAAAGAAGAGGATGGAATTCTGTATGCGATTTACGGGACGCCGGCCGAATCGCTGTGCGGTACACAAGTTGAGCAGTTTCGAAGCCTTTATGGGCGGGTCAAAAATGTATCGGATCGGGCGTATGTAACCAACAGCTTTCATCTGCATGTGACCGAGGAAGTTACGCCGATCGAAAAACAGGATTATGAGAAGCGCTTTTGGGATTTGCTTAACGGCGGCAAGATTCAGTATGTCCGCTATAACATTCCTTATAATGTCAAAGCCATTCGGACGCTGGTGCGCCGGGCAATGAAAATGGGCTTTTATGAAGGTATCAATATGGCGCTGTCCTATTGTGACGACTGCGGGCATCAGGAGCTGAATATGGAAGTTTGTCCCAAGTGCCATTCGGAGAATCTGACTAAGATTGACCGGATGAACGGTTATTTGAGTTTTTCACGGGTCAAGGGCGACACTCGGCTCAATCACGCCAAGACGGTGGAGATTTCGGAAAGAGTAACGATGTAAACGAAACGTGTATTCGGAGCTGCGTTAAGGTGAGAAAATGAGATATCATAATATTACCAAAGACGATATGAATAACGGCGAGGGGCTGAGGGTAGTGCTGTGGCTGGCGGGCTGCGTTCATGCCTGCCCCGGCTGCCACAATCCCATTACCTGGGATATTTGCGGCGGTTTGCCCTTTGATGCGAAAGCCAAGGCTGAGTTGTGGGAAGTCCTAGGCCGGGAGTATATCGACGGTATTACGCTGTCTGGCGGAGATCCGCTCCATCCGCAGAACCGGCCGGAGGTGGAGATACTTTTGGCGGAGATTCGACGAGAGTTCCCGGATAAAAGTGTTTGGCTCTATACCGGCTATTTATGGGAGGAAATTAAGGATTTGCCGCTGATGCGGTCAGTGGACGTGGTAGTTGACGGCAGGTTTGAACGGGATAAGTTCAGCCCGGAACGGCCTTGGGTCGGTTCCTCCAATCAGAGAGTGATTGCGGTTGGCCCGAGCCTGGTGCAGGAGCAGGTTATTTTATATGAAGGATAGATGAATAAGGTCGACTAAGGTCGGCTGGCGGGAAGCACCCTTTTGCCGGATAAACCGGCAGAAGGGTGCTTTTTCAATGTATTTTTTTATGTATTTTAGGGAAAATGAACAAGAAATAAATTGAAAATCCTATGGATAGTAAAAAAGAACTATAAAGAAAATAAGACTTTTAATGAATAAAAAGCAAAAAATGAATAGACAAAAATGCAAAAGTTGGATATAATAAGAATAAGCAGTTACAAGGTTTACATAGGTCATAAGAACTATTAATGGTCTTGAAATAAAGGTATAAATACCTACGACAAGCTGACGAAATGGCTTGCAGATGGGGTTGGAATATGACAGAAGAAAAAGCAAGGGATTTAAAGAAATACCCATTATATTATCCGCTGGTTATGGGTGCACTGTTAGTGCATGTTATCTGTCAGGTTTTGTTTCTTTACTGGAACGAGCCGGTGATGAAGTTTTATAATCTGTTCAGTATTGCCGTTTTTGCAGCGGGTTTGCGATATATCCGCCGGTATCAGAAGCGGGTTGTTTTTATTGTTTTAGTGGAAGCGACCATTTTTGTGATGCTGGCGACGATTACGATGGGCTGGGACTATGGTTTTCAGAACTGGATGTTTGCTTTTCTGATTGTTGAATTGACGGTGCCGTTTAAGGAGCGAAACCCCTTTTATGTGCTCGGCGTATTGCAGTCTGTTCTGTACATTGCCCTTTCTTTTGCTATCAAACAGAAAATGGAGTGGGAAGTTTTATTTCACTTGGACATGATGTTTATTTCTTTAAATATGGCGGCGGTTTTTGCGGTGATTTTCTTTTCCGAGCGGGTACTGGGGCTGTCCAAAGCGATTGAGTTCTTTTTCCTGCAAAAGGAAATGGACGAGATGCGAGAGAGCATTTCCCGGGATGAGCTGACGGGTCTGGTCAGCCGACGGCGGATGAATCAGATCTTAGCGGAGATGAATGATCGCCTGCAAAGAGAGAATATGAAGTTTTATTTGATTTTTGCCGACATTGATCATTTTAAAAATATCAATGATGCTTACGGCCACGAGTTCGGCGACTGCGCTTTGAAACAGGTGTCGAATATTTTGAACCGCGAGCTACGGGGCGATGATATCGTGGCGCGCTGGGGTGGTGAAGAGTTTTTGATTTTGCTGCGCAGCAAAGCAAATGGCAAAGGGCCGTTGGCGGTTGCCGATGTGAAGGAAATTTTAAACCGGGTGCGCCGGAAGGTTGAGGAAACGCCGCTTTGCCGTCAGGGGGAGGATATTGCCATCACCATTACTTTCGGGGGCGTTGGTTCGGACAATTACCGGGATGTCTATGAGATGATTCGCCGGGCTGACGAGCAGATGTATAACGGCAAAAAAGCCGGTCGCAACCGGGTGCAAATTGAGGAGTAATTTGCCGGTTTTGGCGGAAATGTGTTTTGTATTTATGTACAGTTCAGGCAAGTCATTCGTAATTCCTTGCAGTGTCGGCGAATTACCGGTGCGGGCGGAAATGCCTGCCGGCTTGAACTGTAACTTCAATTCTTGAAAAAAAGCAGAGATAGGATTATAATAAGAAATGAGCCTTGCGCTAAGGTGCATTTCTTTTTTTCGTTTTAGAGATTGAAAAGAAAATAGCGGCCGGAAAAAATAAAGTCTTTGGGCCGGTGGCAGCAGCCGCGGGCGCTAAAGTACCAAGCGCAGAGAGCGGCGGGACATTCGGGCGGGAAAGTCAAAACAGAAATCAGAAAAAGGGGAACATTATGCGGGAAAGCTGGAAGAACATTGATAAAAAGCTGCTGGTGAGGAGAGCTTTTTTGATTTTACTGGATATTTTATTAATTAATTTAGCGGCAGGCTGTGCCCTGCTGGTGCGCTTTGATTTTAGTCTGAGCAATATTCCCGGCGGGTACAGCGAGGCGGTGTTTCGGTATGCCCCGATTAATATCGTCGTTACCTTGGGTCTGTTTTGGCTGTTTCGGCTGTATCACAGCCTGTGGAAATATGCCGGCATCGAGGAGCTGACCAATGTAGCCTATGCCTGCGCCTTTTCGGCAGCTGCTCAATGGGGCGGAATGATGGCCTTGGGAGTGCATGTGCCGCGCAGCTTTCATCCGCTGTACTTGGGCTTTTTGCTCTTTTTGGCGGCGTCTTCCCGTTTTGCCTATCGTTTTCTGCGGGCCTTAAATAATCGCTACCGCAATGACCGCAAACGGCGGACGATGATTATCGGCGCGGGCGAAGCGGCGAATGCGATTATCAAGGAGATTAACAACAGCCAGTATCTGGACGGGAAAATCGTCTGTGCGATTGACGATAACCGCAGTAAGATCGGCAGCTATATTCAGGGGGTTAAGGTCACCGGCGCCAGAGAAGATATCCTTGACATGGTAAACAAATATGAAGTGACCGATATCATTATTGCCATTCCCTCGTATTCCAAGGAGCATTTGAAACCGATTCTGGATATCTGTAAGCAGACGGAGTGTTCCCTCAAGATTTTGCCGGGCATGTATCAGTTGATTAACGGACAGGTCAGTGCTTCGCAGCTGCGGAGTGTCGATATTGAGGACTTGGTGGGTCGGGATACGGTTGATTTAGACTTAGGCAGTATTATGAATTATGTCGGCGGCAAAACGGTGATGGTGACCGGCGGCGGCGGGTCGATCGGCAGCGAGCTCTGCCGGCAGCTGGCAAAATATCAGCCGGCCCGGTTGATGATTGTTGATTTTTACGAGAATAACGCTTACGATATTGAGCAGGAGTTAAAGGCCAAATATAAGGATTTGAACTTAACGGTGCTGATTGCTTCGGTTTGTGATGAAAAGCGAATGGCGGCTATTTTTGAGAAGTACCGGCCGGATATTGTGTATCATGCGGCGGCGCATAAGCATGTGCCGCTGATGGAAGGAAGTCCGAACGAAGCGATTAAAAACAATGTTTTCGGTACGCAGACAATGGCGGAGCTGGCCGACCGCTACGGAGTCAAGCGCTTTGTTTTGATTTCGACCGATAAGGCAGTCAATCCGACGAACATTATGGGAGCATCGAAGCGGATTTGCGAGATGCTGATTCAAAGCTTTGATAAAAAGTCCAAAACCGAGTTTGCGGCTGTACGTTTTGGAAATGTTTTGGGCAGCAACGGCAGTATTGTGCCGCTGTTCCGCAAGCAGATTCTGCGGGGCGGGCCGGTCACGGTCACGCATCCTGATATTATCCGTTATTTCATGACAATTCCGGAGGCGGTGGCTTTGGTGCTGCAGGCGGGAGCGCTGGCCGGCGGCGGTGAGATTTTTGTGTTGGATATGGGGGAGCAGGTCAAAATTGTAGATTTGGCTCGGAACCTGATTCGGCTGATGGGTTTTGTGCCCGACCGGGATATTAAGATTGAATATATTGGCCTCCGGCCGGGTGAAAAGCTGTATGAGGAGTTTTTAATGGCTGAGGAGGGCTTACAGGAAACCAGCAATAAGCTGATTCATATCGGCCGGCCGATTCCGATGGAGGAGGAAGTCTTTGCTGCCAATTTAGCTAAGCTCAGGCAGGCGGTCGAAGAAGAAGGCGAAATCAAAGAGATTGTTAAAAGCCTTGTGCCGACTTACCGGATGGACGGGCAGGAGTAGGCGCTGCATACCATGGGTGAGCGGGCGCTGATAGAAGATATTGATGAATATATAGCGGTACTTGCGGCCAGGGAAACGCAAGGGGAATAAGATTTGCTTGTGCTTTTGGTAAAAAACGGCTATAATAAAGGTTGGAGCAGACAGACAGCTGACGGTGAGGAAATGTTATGGCATATAAATTATTGGTAGTGGACGATGAAAGCAATATCGTGGACATTTTGCGGTTTAATTTGGAAAAAGAAGGCTTTGAAGTGCATACCGCTGAAAACGGCAGGCAGGGCTATGAGCTTTTTAAAAAAGAAAAGCCGGATTTGCTGCTGCTGGATATCATGATGCCGGAATTGGACGGTTTTGGCCTGTGCAAGATGATTCGGGAAGAATCCAATGTGCCGATTATCATGTTGACGGCTCGGGCGGAGGAAGTCGACAAGGTGCTGGGACTGGAGTTTGGAGCGGATGATTACATCACCAAGCCTTTCAGCGTCAGAGAATTGATTGCCAGAGTCAAGGCCAATCTGCGCCGGCAAAATATGGAGGGGCAAAGCATCGGTCTGCCGGATAAAATTTTACGCTTCGGGAAATTAGAGGTCGATACGGTACAGTACAAAGTGACCAAAGACAAGGCCGAGATTGATTTGACGGTTCGTGAGTACGAATTGCTTAAGTTTTTAATGGAGCAGGGCAATCAAATCTTTACCCGCGAGCAGCTTTTGGAGCAGGTTTGGGGCTATGAATACTATGGCGATGTGCGGACGGTTGACGTCACGGTACGTCGGCTTCGGGAAAAAATTGAGGATGAGCCGAGCAATCCCATTTATATTTTAACTAAGCGGGGCGTGGGCTATTATTTTAATCCGAAGAAAACCGGAGTTTAGGGAGAATATATGCATTTAAGAAGTATACGCTGGCGCTTGGTGACGATTTATGTTTTGCTGGTAATTATTGTCATGATGGCCAGCGGAACCTTGATTGTATATCTGACCAGAGATAATGAGTATAAGGTGATCAAAAACGATCTGCGGCATCTGGCGGCACTGGCGACCGCCATTTCCGCCGAGGATGACGCATCGGCGGAAGCGCTGGAAAAACAGTATATGAACCTGCTGATGCAGGGGCGGCTGGGTCAGCCGGCCTCGGACAGTATTATTTGTATGCTGCGGCCAAACGGGGAAGTGATTTATACGACCTCGGAGGTGGAAACGGCCAAGCGGATTCTGACGCCGCAGACCATGGCGGCGGCTATGGGCAATACGCTGGAGGAGTTTGACCGGGTCGGCAACATTCGGGAAAATGACCGAATGATGGGATTGGCCTTGCCGGTCAAGGACAACCGGGGCGAAGTCGCCTTTATTCTTTATTTTTTAAAGGGAACCGAGCAGGTGGAAGAAAACATCCGGCGGACGGTTTATGTCATTGCGGTTTCGGTTTTGCTGGCAATCGGGCTGGCGATGTTTTTGGGCTATGTTTTTGCCGGATATTTGACTCGGCCGATTCGTTCGCTTTCCAGGCGGGCTAAGGATATGGCGGCCGGAAACCTGAAAAACCCGATTCCGGTGCTGTCCAATGATGAAATTGGCGATTTGACCGATAATTTTAACTATATGGCTAAGTCCTTGAACCGGACGATGGAACAGATGGCCGGGGAAAAGAACAAGATGGAAACCATTATTCATTATATGACCGACGGGATTCTGGTCTTTGATGAAGAGGGCCAGATTATTCATAAAAATCCGGCTTCGATGCGGATGCTGGATTTCCGCGGTGCTAAAAATTATGAGGAAGTTTTTGATGAAGCCCTGAAAATGTCGTATCGGGAGCTGACCGGGAAGATGGAACAGGGTCAGCTAAAGTTTACTTTGGAAAAGGAAAATCAATATTTTAATGTGGCGTTTGCCCGATATTTCAGTGACGACCGGGTGGCCCGAGGAGTGATTTGCGTTATTCAGGACGTCACAGAGCATAAAAAGCTGGAGCAGATTCAAAAAGAGTTTGTGGCCAATGTTTCGCATGAACTGCGGACGCCGATTACAACGGTGAAAAGCTATGCCGAAACTTTGCTGGATTTGCCGCCGGAGGATATTGAGAACCGGGAACGGTTTTTGACCGTTATTAATTCGGAAAGCGACCGGATGACGGCTTTGGTTCAGGATTTACTGGACTTATCTAAGCTTGATAACAAAAAGATTGGTTTTCAGATGGAGCAGATTGAACTGACAGCGCTGGTCCGCGGCGAGGTAGAGGGCTACCAGATTCATGCCCGTAAAAAAGGACAGCAACTCTTATTTGAAGCTGAGGAAAACTATTATATTTACGGCGATCCCGGTCGGGTATCGCAGGTTTTTCGCAATTTGATTTCCAATGCCGTTAAATACAGCGGTGAGGGCAGTCAGGTTAAGGTGTCGTTATCCGCGGAAGAAAGTTTTGTGGTCGGTAAGATTCAGGATCAGGGGATCGGAATCGCGCCGGAGGATTTGCCACGGGTATTTGAGCGCTTTTACCGGGTCGATAAGGCCCGCTCCCGGGCGATGGGCGGAACGGGATTGGGACTGGCGATTGTCAAGGAGATTATGCAGTATCACGGCGGCCGGGTTGAGGTCACATCGGAGCTGGGGAAGGGGAGTTGTTTTTATTTATATTTTCCCTGTTGA

Protein sequences of DBSCAN-SWA_2

>CP027241|1309179:1318126|1313618_1315478_+|AVM70457.1|DBSCAN-SWA
MRESWKNIDKKLLVRRAFLILLDILLINLAAGCALLVRFDFSLSNIPGGYSEAVFRYAPINIVVTLGLFWLFRLYHSLWKYAGIEELTNVAYACAFSAAAQWGGMMALGVHVPRSFHPLYLGFLLFLAASSRFAYRFLRALNNRYRNDRKRRTMIIGAGEAANAIIKEINNSQYLDGKIVCAIDDNRSKIGSYIQGVKVTGAREDILDMVNKYEVTDIIIAIPSYSKEHLKPILDICKQTECSLKILPGMYQLINGQVSASQLRSVDIEDLVGRDTVDLDLGSIMNYVGGKTVMVTGGGGSIGSELCRQLAKYQPARLMIVDFYENNAYDIEQELKAKYKDLNLTVLIASVCDEKRMAAIFEKYRPDIVYHAAAHKHVPLMEGSPNEAIKNNVFGTQTMAELADRYGVKRFVLISTDKAVNPTNIMGASKRICEMLIQSFDKKSKTEFAAVRFGNVLGSNGSIVPLFRKQILRGGPVTVTHPDIIRYFMTIPEAVALVLQAGALAGGGEIFVLDMGEQVKIVDLARNLIRLMGFVPDRDIKIEYIGLRPGEKLYEEFLMAEEGLQETSNKLIHIGRPIPMEEEVFAANLAKLRQAVEEEGEIKEIVKSLVPTYRMDGQE
>CP027241|1309179:1318126|1312173_1313268_+|AVM68832.1|DBSCAN-SWA
MACRWGWNMTEEKARDLKKYPLYYPLVMGALLVHVICQVLFLYWNEPVMKFYNLFSIAVFAAGLRYIRRYQKRVVFIVLVEATIFVMLATITMGWDYGFQNWMFAFLIVELTVPFKERNPFYVLGVLQSVLYIALSFAIKQKMEWEVLFHLDMMFISLNMAAVFAVIFFSERVLGLSKAIEFFFLQKEMDEMRESISRDELTGLVSRRRMNQILAEMNDRLQRENMKFYLIFADIDHFKNINDAYGHEFGDCALKQVSNILNRELRGDDIVARWGGEEFLILLRSKANGKGPLAVADVKEILNRVRRKVEETPLCRQGEDIAITITFGGVGSDNYRDVYEMIRRADEQMYNGKKAGRNRVQIEE
>CP027241|1309179:1318126|1316362_1318126_+|AVM68834.1|DBSCAN-SWA
MHLRSIRWRLVTIYVLLVIIVMMASGTLIVYLTRDNEYKVIKNDLRHLAALATAISAEDDASAEALEKQYMNLLMQGRLGQPASDSIICMLRPNGEVIYTTSEVETAKRILTPQTMAAAMGNTLEEFDRVGNIRENDRMMGLALPVKDNRGEVAFILYFLKGTEQVEENIRRTVYVIAVSVLLAIGLAMFLGYVFAGYLTRPIRSLSRRAKDMAAGNLKNPIPVLSNDEIGDLTDNFNYMAKSLNRTMEQMAGEKNKMETIIHYMTDGILVFDEEGQIIHKNPASMRMLDFRGAKNYEEVFDEALKMSYRELTGKMEQGQLKFTLEKENQYFNVAFARYFSDDRVARGVICVIQDVTEHKKLEQIQKEFVANVSHELRTPITTVKSYAETLLDLPPEDIENRERFLTVINSESDRMTALVQDLLDLSKLDNKKIGFQMEQIELTALVRGEVEGYQIHARKKGQQLLFEAEENYYIYGDPGRVSQVFRNLISNAVKYSGEGSQVKVSLSAEESFVVGKIQDQGIGIAPEDLPRVFERFYRVDKARSRAMGGTGLGLAIVKEIMQYHGGRVEVTSELGKGSCFYLYFPC
>CP027241|1309179:1318126|1315645_1316353_+|AVM68833.1|DBSCAN-SWA
MAYKLLVVDDESNIVDILRFNLEKEGFEVHTAENGRQGYELFKKEKPDLLLLDIMMPELDGFGLCKMIREESNVPIIMLTARAEEVDKVLGLEFGADDYITKPFSVRELIARVKANLRRQNMEGQSIGLPDKILRFGKLEVDTVQYKVTKDKAEIDLTVREYELLKFLMEQGNQIFTREQLLEQVWGYEYYGDVRTVDVTVRRLREKIEDEPSNPIYILTKRGVGYYFNPKKTGV
>CP027241|1309179:1318126|1311367_1311859_+|AVM68831.1|DBSCAN-SWA
MRYHNITKDDMNNGEGLRVVLWLAGCVHACPGCHNPITWDICGGLPFDAKAKAELWEVLGREYIDGITLSGGDPLHPQNRPEVEILLAEIRREFPDKSVWLYTGYLWEEIKDLPLMRSVDVVVDGRFERDKFSPERPWVGSSNQRVIAVGPSLVQEQVILYEG
>CP027241|1309179:1318126|1309179_1311330_+|AVM68830.1|DBSCAN-SWA
MELKEVKVRKKDSTLQPFTAEKIVAAVKKSADRVLVKFTAEEEREIVGLVTEKILHLNTNIVPIETMHNFVEYALDKVNPAVAKSYREYRNYKIDFVNMLDDVYRKSQKVRYIGDKENSNTDSALVATKRSLIYNQLNKELYQKFFLNKEERSAIRAGYIYIHDMVSRLDTMNCCLFDMKAVLTGGFEMANIWYNEPKTLDTAFDVIGDIVLSTAAQQYGGFTIGELDKILAPYAEKSYKKYLFDYSDMIVGEMTPEQRQRIEEKVLAKVRRDMEQGFQGIEYKLNTVGSSRGDYPFITITAGLATDRWGKLATECMLRVHMGGQGKAGFKKPVLFPKIVFLYDEELHGEGKELEDIFELAIECSSKTMYPDFLSLTGEGYVAEMYKKYKKVVSPMGCRAFLSPWYERGGMKPADENDVPIFTGRWNGGAISLHLPMIYAKAKEEGKDFYEVLDYYLQMIRTLHQKTYEYLGNLRASVNPLAFCEGGFYQGRLKHSDKIRPILPAVTFSFGITALNELQQIHNGKSLREDAEFALEVMEYINKKAQEFKEEDGILYAIYGTPAESLCGTQVEQFRSLYGRVKNVSDRAYVTNSFHLHVTEEVTPIEKQDYEKRFWDLLNGGKIQYVRYNIPYNVKAIRTLVRRAMKMGFYEGINMALSYCDDCGHQELNMEVCPKCHSENLTKIDRMNGYLSFSRVKGDTRLNHAKTVEISERVTM

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVM68830.1|1309179_1311330_+	anaerobic ribonucleoside-triphosphate reductase	A0A0K1LPA1	Citrobacter_phage	9.0e-182	46.0
AVM68831.1|1311367_1311859_+	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A2D1GM58	Salmonella_phage	2.4e-37	44.5
AVM68832.1|1312173_1313268_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	2.1e-17	30.2
AVM70457.1|1313618_1315478_+	nucleoside-diphosphate sugar epimerase	A0A2P1ELS8	Moumouvirus	1.6e-25	28.6
AVM68833.1|1315645_1316353_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	5.6e-40	39.1
AVM68834.1|1316362_1318126_+	hypothetical protein	W8CYF6	Bacillus_phage	1.0e-34	33.0

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>CP027241|1436714:1452880|DBSCAN-SWA
TTTAAAGGACTAAACATCTTGCTTGTTGTTCTTTTTCCAAGCGTTTCATTTCCTCCATAGCCGAATTACAGGTCGCATGTGCATAATAGTTCAGTGTCATGGTTATGTTTGCGTGTCCCATAATATATTGCAGGGCTTTGGGATTCATACCGGCATTGGCACAGTTGGTGCAGAATGTATGCCTAAGTGTATGCGGTGTGATATGTGGCAATTTTTCCTCATGGCATTTGTTGTACTTTTTAATGAGGTTTCTTAGTATGCTGTTAAAATCACATGCCGTTTTAGGATAGCCATTTCTGTTGAGAAAAAGAAAGTTGCTATATCCATCAATCTCAACACATTCGTTTTGGTTTTGCACTGCCAATACTCTTTTCAATGCCTGACATGTAACTTCAACCATTGGTACTTGCCGCTCACTGCTTTTGGTTTTAGGTGTTTCAATGTAATACCCAAGCTCAGTGTTTCTTAGTAGCTGATGATTAACCAAGATAAGATGATTTTCAAAATCCAAATCTGTAACAGTCATACCGCATAGCTCTGAAATACGAAGTCCGGTTTTTAACAGTATCAGAATTTCGTCATAATTCTTGTGATAGACCGTATCAGACTTTGCGAAATCAAGCAGTCTTGCTTCCTGTTCCAGTGTCAATATCGTTTTAGGAACGGTATCATCATCAATAACGGTATTAAGCTGAAAATCAAATGGATTCTTTCTTACATAATCATCCTGTATCGCAATGTAAAAGGAAGCTCGCAGTGACCGCTTATAGTTATTGATGGTGGAATAGGCAAATCCGTTTTCACTCATTCTAATAGCCCATTCCTTAGCGTCAGACGGTTTAATGCTGTCTATGCTTCTTGCGCCCAGCTTATCGTTCTTCAAAATTTCCATCAGATATTTACGTCCGGTCTTTGTGTTTGCTTTTACATTAGGACGCTGAGCATTTTGCTTGGCGTAAAGCTGGCAAAGTGTCATCTTCTTGCCGATAACATCAATCCCATCTTGAACATCTTTTTGTATCTCTGCAATTTTTTCACGCAGTGCGATACAATCCCGCTTGCCTGCCGGTACTCTGTCCGTAGATACCAGCTTCCATGAGTAGATAAACCGTGTTTCTCCGAATGAATCTATATATTTGTATAAGTATCTTCCGTCTTTTCTCTGGCTCTCTCCAGTCCTCAAAATCCGACCTTTACGGTCACGTCTTTTTTCTGACATGGTATCTGCTCCTTTCCTGTATGGAAAGAGCCTTGATACGACTTGATACGATTATACCATATCTATTCAAGACCCTTATACCCTATATGACATCTAATGTATCTATCACTTTTTCAAATTGCTTTCGCTTGATCTGAATCCTGTTCCCGTTCATAATCAGCCAGCCTGCATTCTTGTTTTCTTCTGCTAAACGACGCAGCTTATTTTCACCGATACGGAAATATTTAGCAGCTTCTTCAATCGTCAGCGTGTAGCGTTCCCAGATAGGAACATAAGCCTGATTCATGTCATCAATCCTCCTTTCAAATTTTTGGCTTTACAAGCAGTCAGACAGCCTTGGCAAGGCTCACGGGAATCTCACCCCTGCATGGTTCTCATGCAGCCGTACTCATTGCCTGCGACGGCTCACACAGGTTCTCTGTGCTTCAACGCTCGGACTGTGACTGTACGGGAGTATCATTATGTCGATAAAAAAGTCATGGCAATCATCTTGCTGATGATGACTTATGGAGTTCCGGTATCAATCGCTCACTGTCATTTCTGACAGGTCATGGCGTACCAGTCCATCAGCTCGTTTCTTATCGCAACGTATCTGACCGCTTTATTCAGTTTTCAAAGAACATAGGGGCTTATTCGCCTGCAAAAACACATATGGGAATATATGCTTTTGCAGAATAACAAGCCTCTCCAATCGGGAAGCGTGGAAACGTCATCACGCTTCCACGAAAAGAGAGCGTGTGTCACTTGATTTCAAATGACAGAATCTTTGTAATCAGCCTTGTTTCCATTCGTCCACGCAAAACCTCATCAACAACCATGCTTTGGTTTCCGTATTCGTCTTTCATCAGACGCAGGGAGCGTTTTGTCATATATCCCCGATAGTGCCGGATAATCTGATTGATTGCTTCTGAATTGCCGTCAGCAGCTTTGACAATGAGAGGAAAGGGAACAAGAGGATAATTCTTCTTCATTCTTCAAATTCCTCCATAAACTTCTTCATCATGGCAAGTCCGCCGGTTCTGTGCCGGTAAACAGTGGAACGGTTTACTTTCAACATGTCTGCAATCTCCGAATCGCTCATATTCATAAAATAGAACAGAAGCAGAATCTCACGCTTGTTGCTCGGCAAGTTCCGCAGTGCTTCGCTTAGCAGGTCATTTTCAATGCTGATGGATATGCCGTTCAGCATAAAAATCTGAAAGTCCGTTACATAGCTGTCTGTTGTGGCAAACTGACTGACAAGATAATCGCCGATTTCCGAAAAGGACACTTCATGTTTTGCCAGTCTGGAAAGCTGTTTGAAATAGTCCTTTCGTTCATCTTCCATAGCCTGCTTGCAGATGTAGTCAAACTGGTTTTCTATCGTTGTCTGAAAAGATGACGGTTTCATGTTCTCACCCCCTTTCTCTGGATTGAAAGGAAGTGAGCCTTGCTCCTTTACCTCCTTTCACTCTTAGTCCCGACGTGAAAGGGGGATTTGTTGCATTACCAGTCAAAAAAATTTCGGATAAATAAAAAACACACAAACAGACCGTTCTCTGTTTATGTGTCCATGCAGTGTTGCTTATATTATTTGTGGAAGTGAAAAACCACGGAGGATTCTTTTGTATAGATAACTGTGTTTTATGTTTGTAAGCAAATGCCGTATAAAATCGGCTTGTAGTATATATTTTTCATGATAATTCTCCTAATAAAAATAGCCGATAACATAAGATTTTATATCTTACATCATCGGCTCTGCGTCTTTGCGTCCGGCTCTTTAATGATTGTGGTTTTAAACTCTTTTATACTAACTAAAGTTTCTAATTTACACTTAGGACAGTAAAGAGGAAAATTCCTTAATTCGGTATCTTTTCGTAGTTTTATCCTCGTTTTACTTTTACATATAGGACATAACAACCATTCTGTTAGCAACATCGTCATCACTCACCATTACATATAGAATTATCAGATACAATTTCTCTAAATTCTGATAATAGTTTAATATACTCTTTTGGCTTGAAAGTATGAATAACATGATTAGCGGAAACTTTTTTATATATTATTTGCGGAGCCAAGGAAATAGCATGATGAGCGTCATCATCATCAAATGCTCCTATAAGTCCGTAATTTTCGTAGCGTTTCCAATCGGCTTGAATAAGCAGTACGGGGCATTTGGTTTTTTCAAAAGCTTCTGCATGGTCAATACCATCATAAAACCTGCCATCTACAAAGGCTCTGGCAAAATCCGGGTCAAACATAGACAATGATTTAATTAGCAAACGTAAGCTATCTGGGAAGCCAATTTCAACCGGACTATCAGGGTATTTATCCTGAAACTTCTTTATCTTTCGTGATAACCAACTAACAAACCAATTTGGAATTCTTTTGATTCTCTTATCAGAAGCTGGTACTTCCATATTTTGAAAATAATTTGCTAAATCTCTATCTGGTATATTTCCGATTTGATTAACAAGGTGCTTTAGCCCGTTATATACGAATTTATCTTGTTCTTTAAATCGTGGCATTTCAGCAGAAAAAATGGGTGCGTCCTCAAGAATAATTCCGGAAATATATTCAGGAATATTAGCAGCACACCAAAGAGCGATAATGCCACCTGATGAATTTCCGCTAATAATAACTTTTTGTTTTATTACATTTTCTATAAATATTTTTATGTCCTCACCAATAATTTTCCATGAATAATGCCCCGGTGTCCAAGAAGACTTTCCATGACCTCTCACATCTATGGCATATACTTGGAAAATTTTTGATAGTGGCAAAAGTACTTTCTTATAACTTTCCCACATACCCATTTGAGCAGGAATCAATAATAAACTCGGTCCATTTTTAGGACCAACCACATAGTTCAGCTTAACGCTCCCTGTATCATAAGTTTTTTCTGAAAAACCAGCATTTACCAGTTTTCGATTATTTAGTTTTCCAGACAATTTTTCGTATGGATTTTTATAGTTCATTCAACATTCCTCCTAACTATAATTCTTGAATGTTTTACTCGATAACAATTCCGTAAATCATTAAATCAAGATATTCTTTAACATCTTTTTTAAATTCATGAAAATTATCAAATAACTCCATTGGCTTGTCTTGATACAAATGTAGATATTTCATTACAATTGCATCAATATACAAACTTAAACTCTCTATAATTTTTTGAGTATCTATGTCTTGTCTTAGTTTCAATTTTTTAACAGCACTTAAAATAATCTTACTTGATTTTTCTTTTGATTTTTTATGATATATGCTTAAAATATTTCTAATATCTTTACTAACTTCTTTGTGTGTTTCCTTTGAAACCATATTTAAAAATTTTGTTTCATTTGGATATTTTGTGATTAAATTATATTTCATATCCATCATATAAAAAATTATTTCATAAAAATTATCATAAGTTCCTTCGTATTCTAAATCTTGTGTCAATAGGTCGACTGTATGTTTAAACAGGTATAAGTAAAAATTCTTTTTATTGCCAAAATAATAAAATAATAAACCTTTAGAAATACCAGCTTCATGAGTGATTAAATCAGTCCGTGCTTCTACAAAGGAAAACTTTGAGAAAATTTCAATTCCCTTGGTTATTATTTGCTCCTTTTTTTCATCTGAAATTTTTTCAAAATTCTTAGTAACCATTAGACACCTCACTAAATTGACCAATCAGTCAGTACTCTTGATTAGAGTATATCATATTTTGACTGATTGGTCAATTTCGGATGGTAAAGAGTGAAATGGTAATATTTTCTTTGATTAGATTACTTCACAATCTTCCAATTCCCATCATTCTTTTCAAGTGTCAGACTGAACTGTGATACCTGCGTTGCTTTGGTCTGTGGGTCAAGATATTTAACCGATAAAGACACTGTAACCTGATTTTCTTTACGATTATAAATCGGATTGACCAGCTCCTGAAAAACATACTCTTTTCCAACCGGTTTTAGGATTCCATCTGTCACATAGTAGGACAGTTCCTTTTGCGTGGCAGTCGGGTAGAGCTTGAAGAAGGTGGTTAAAAAGTCATTGATTTCATTTGCAGTAACAGAATCCACCGTGCCGTCATTTTCTATTATCTTAGGCTGATAGGAAGACTTTGACGGTATGCTTGTAATGGTCGGATTCTTAATGATGACCATGTTTCCGGCACTGTCCACATAGACACTGACAGAATAAGCAGACTGCACGTTTTTCTTGCTTTCTCCCTCTGTAATAAGCTGTTCTACACTGTAGGTCATATCAAAGGTGTGATTCCCAGTATTTTTGACGCTCCATATCTGAAAGTTTTGAAGCGAGGAGGACACCGGTATATCCTTTCGTACCGTGTCGTTATTAAGAGCTTGAAGCTCCTCTGTCAGATAGTTTTTCAGTGCTTTGGTTCGGTTGTCAATCGAGGTGCTGTTTTGCTCCCATGTGTAATAGACTTTCGAAAATTTCTCTACAAAATTTTCTATATTATGCGTATCCATATATTCTTTTTCGATGACCTTCGTTTCATGAATGGTATGGGTATCTATTGCCGTAAAATGCTTAAATACCGCAAAGCTGAAGCTGACTGCTAAGAGTATCCACAGGGCAATCACTATCTTTCTTCGAGGATTTATCTTATGAATACGGGGTTTCTTCTCTTTTGGAAGCTGTTTTTTATTGTTGTTATGATTGATGAATTTCATATTTTATTCCTTTCTTATCGTTTGATTCGTCCTGCTCCTGCCAAATGCTGCTGCCAGTAGGAGCTTGTCAAGTCGGTATAACCGATCGGGTCGCCTGCATGGTACATACGGTTATTGCCGACATAGATTCCGACATGGGTAATGTATGTTCCGGAATTGTAAGTAGAATGGAAGAATATCAAATCTCCAGCCTTGGCTTCGGATAGAGAGATGTGTTGGGTAGCGTCATACTGTGCCTGTGCGGTTCTTGGCAAAGAGATACCGGCTTTCCCATAGCACCACTGCACCAGTCCCGAACAGTCAAAAGAGGTAGTGGGAGAAGAACCGCCAAATACATATTTCCAGCCCTCATATTTAAGCGCTTCATTCATAATTGCCTGTGCGGTTTCATCATCAAACTGCGATGTCACAAGATACTGTTTAACCAGAGCTACATAAAACATATTTCCATAGCTGTATCGCCAGCCCCCGTTCATAGAGATGGCAATAGAGTTGGGGTAGTCCACCTTTACACCGCCGGAATGCTCCTTTGCAAAGCTCTGCGCCAGTTCAAAGCTGTATTTTTTGCCATGACGGGCGACATAATCTAAAAATCCACCGCCATAGTTATAGGACTGTATGACACAATCGAAATCTACTTCCAGACGCTTACTGCCTGCCAGAAGCTCACTGAAATACTTTACGCCCTGTTTGATAGAGCTTTCCGTATCCAATGAGTTCGGAGGAAGCCCCAGCGATTCCGAAGACTGCATGACATCTTTTGCCGTACCGCCGGATTCCACCTGCATGATGGCAAGCAATACATTTACATATTCACTCACACCATATTCCTTGGCGTATTTTTCTACCATAGGCTTGTGTGCCAGAACCTCCATGGAAACGGTCGCACCGCCAAATTGACTGTTCCCAAATCCGCCATCCTGTTCATCAGAAGATAAAATTGTGATAAACAAAAGTAGCGAGAATACAACTACGAAAAAACAGGAAAAGCCGATGAGAAGATGTTTTAATTTCATGACGGCTTACCTTGGTCTTTTTTTATTCTGGCGGTTTGTAACGGTCTGCTTTTTGTGTTTACAGTCTGTGTTCTTGAAATAACAGGAGCTTGTCTTTTCGCTTTAAGCGGTGTTGAATTTTCTTTTAATCGGCTTGCTCTCTGGACAGACCATTCCTGTATATTTGCTGATTGAAATTCTCTTATCGTTTTTTGTGGTTCTTGTTTCTGAGCCGTTCGTTCCTGCCTAATTATCGGTCTTTCATGGACAGATGAAGCTACGCTGTTCTCTGATTTTGCCATTTCCATCCTCAAACGGCGTTCCGCAATCGTCTGTCGTCTTGCTTCCTGCTCCTGATTGCGTCTGTCTGCTCTGTGTGTTCTTGCCTGAGTGATACCGCCGGTAAAATCATTCATATTTTCTCTGATTTTGTTTTTACCTTGAAAGACGGCATATCTTGCGTTTGTCGGCAGGTCAGTGACCTGTTCCCTGAATTGATTGACAGATGCTGCTATCGTGTCTTTTGTATCGGCTATCGTTCCGACACCTTGTCCGAGCTTTGCTCCCAGTGAAGCCGAATGCTCACTTTGTGGTCGGCTATGGTCGGCTTGTGTTTTCGGAGAATGTGTTAAGCCATCTCTTTTCTGATTTCTTTTTCCGGCAATCGCAGAACCTACTCCATAAGCAGTCATGGAACGACCTAATGTTCTTTGTAGGCGGTGCATTTGTGCGTGCATAAGCATACGGGGTCTTCTCATCATACGGCTTCCGACACCTTGTGAATCATTGCTTTGCAGAGAAAACAGGCTCATCAAGTCACCAAGCTTAAAATAAATGCCTGCAAAGGTCACGATCTGCAAGAAAGCAACCATAAAGAACGGATAACCGGCAGACAGACTGTAAAGCATGGTGGAAATGCTAAAGGCAACAGTAATAATCAATGTAATGCCTGCACGGGTCAGGATGGTATTAAAGAGCTTTGTAATGGCTCTTTTGCTCATGCCCTCAAAGGTCGGCAGCATGCTGAGCAGGAAGCTGACCGGCAGGAACATGGCATAGATGATAAAGAGTATCTGTGAGAAAATCATAATGCCGGTCAGAAGAAAGACAAAGATGGAAATACCAATATTAAAGAAGAACAGGAAAAATACCGTTCCTAACCTGCTGATTGTCTTTGTGATGGTCATATTGGCATTATCTTTATCCTCAATTTCCTCTTTGATGATGTTTTCCCTGTCTTCACCGTTATTGGAATCGGGACTTGTGGACAAAAGATTTTCCACACGGTCGGTGCCAAGACTGTCTATGTCGGTTGTTCCGTACTGGAGCAGCAGCCAGGGCTGTTTCACCTGTATGGAAAACAGGCTGTCCCGGATTAAATCCACACTGTCTTTTCCTTTGGCTTCGGAATCCGGCAAGGTGATTTTTGTGCCAAGCGATAAGCTGGCATTGCTGATGTCCGACGAAAAATCATTGATTTTCGCAATGTAATCCGGCGCATAGGCAATGAAGGAAGCGGACAGGATAAATACCAGTACGAAATTGACAATCGCATGAACCGCCTTTGTCGTTTCTCTTTTGATAAGTCCTGTATAGCTGACATAGATACCGAGTACCAGAATAAAAATCAAAAGAAAACCGACATAAAAGCCCTCTGATGACAGACCGTATGAAGTAACACCGGCTAAGGTCTGCATGTTTTTTCCGATGGCATTCGCCGTGGAAGAAATGAAATCCAAGGAATACGCTTCTTTTACCAAGTAACCTGTGGCGTTTGAGATATACAGACTGATTGTCCAGATGAAATTGGTAATCGCATAAAGTCCATACATGACCTGCTTTCCAATGCCATCTGTCCAGTTCCACGGCAGCCAGTCCCAAGAATTATCGACATAAAAATCAAGCTGGTAGTTTGACAGCGGATATTTGCTGTATTCATTGGCAGTATTGACCGTATCGTCAACCAGTCCTGCGGCGTGTACTACGGTTCCGACCACAGACAGAAATACTAAGGTGGCAATAAGAATCGCACCTGCTATCAGTATGACTTTCCCAATTCGCTTGACTACTTTTGCTATATTTTGCTGTTTCATGCTTACACCTCAATTCTTACCGGCGGTCTGGTATCAAAGGCATGGAGCAGTTCCTCAAACACAGGGTGAAACTGTATCACGCCGACACGCCCATATAAATCACTGATTAGACACTGCCCGTTTTCCAAGTTACGCAGACGCTTTTGGTTGTACTCATCTTCGGGGTCAACCCCAAAGAACGCCAAAGTCTTTTTTATCTCATTGATGTCCGTGGAGCGGAAAGCAAATTTCAGCCCCAGATTATTTTTGAGCTTTTCATCTAAGAGGTCGTCCGTATTTTGTGTCACGAAATAGACACCGGCATTCATGGCACGACCGGCACGCACTAATTTCATGGATAGGGTCTTGCCCTGCGCCACCTGTAAAAAGCTCCATGCTTCGTCCAAGTCCACAATCTTGAAAATGCTTCTGTCCGTATGGATAAAATCCAATGCAAAGGTGCTGATAACAATGAGCATTGCCACAGACAGCAGTTCCATAGTAGTATATTCTTCAAAATCGGTTTCCTTGTCCGGAAGCACCAAATCGGCAACCTGTATGATGTTTAGCTGTTTTTCCAAGCTGATGGACTGTTTTACCTCACCGTCACTAAAGAGAAGATGAGCAAAATCATAGTCGGTAAAACTTTCAATATGCTCTGCAATGCTTGTGGCGGTATCCGTTCCCTCAATTCTCAATTCTTCAATAACCTTTAATAAGCCCCTTACTTCACTGTTTGTTACGGCACGAATGGCTTTTCTAAGGACGGGGAAACGGTCGGAATCACGGGAAGAAATCCCTGTCAAAAAGGTCAATATATCAATCGCAAGAGATTCTGAATCCTTTGGATTTTTCATAATTACATAAGGGTCAAGTAATCCCATGTTTTTCTTTTCAGAGGTCAGATTGACAATATTTATTTCATGAGCGATTTCAGGCAGGGTTTCTTTCCAACTTCCACGTTCCGCTTTCGGGTCAACAATAAGAGCCTGTGCCCCGAAAAGCACCGCATAATAGACAATCAGATTATTGGCAAAGGATTTTCCACCGCCAAGAGAGCCGACAAAAGCGGAAGCCAAGGCATTCGTCACAGAGCCTTTTACTCCCTGTGAAGCAAGAGCCGGTTTCAGATAAACATTTCTTCCCGTATCCAGATTGTAACCGACATAGATTCCGTCTTTTTCCCCAAGCATTTGTGTTGCCCCAAAGCCAAGTCCGGCAAGAAAATCCGAAGTCACATACTGGATATAGTCATTCATATAGCGTTTGCTGGCTGGCAGAAATTCTCCCTGCAAGCCCAACATGTCGCCAAACGGTCGCACCAGCTTTACGCTTAAATCATCGTAAAAATCCTTCACCTCATCACAACGTCGTTTCAGCTCATCCATATCATTAGCGGATACACGCACTACATAGGAGAGCTTATACATGGATTCCTTGCTCTGGTCTAAACTGCTTTCCAGCTCACTGACACTTTCTAAAGCGTCGGCGACATTGGTGCTGGTTTCATTGTCATTCTGCCAAGCGTGGTTATCCAAATCTTTCAGTTCCTTTTTCTTATTTCTGACTGTCCCCAAAGCCTTTTTATTGGCTACAATTTCTACATTCATGGATGTATCAATCGGAAACGTGAATTGCTGTTGCTGATAGTAGAAAATTTCACTTGATGGGAAATCCAGTTCTCCGACAACGCTGTTAATCGTAAAGTAAGCAACGTACACGGTTCTATCTTCCTGTTCCAGTTTCAAATATCGCTGCTTTTCTTCAATCAGGCAACGGGTCGGCTTAATCAGGTCATAGTATTTTACCAGTGTTTCTCCATCCGTCTTTTTCTTTGAAAGATGGTAGGTATAATCTTCATAGGCTGTGCCGGTCTGTCCATAGATGTGTTCAATGAGATAACCGAAATCATCTTTATTTAATGGTCGGATTTTAAATCTTCTTGAAATCTTGTTCGAGAGCAGCTTTTCCATCTTTGAATAGCGTAAAATCTCATCATTGCTCATGCTGACAAAATCGCCCATCAGCTTATGGTTGACATCATAGATAAAATCCAAAGCCGCATTTTTGGCTTCTTTTGTAAATTCCCTGACGGATACATCCTGTTCGCCAAAAAGGAGCTTAAAGCCGATATAAAAGCGGTAATCGACCTGATTTTCTCCAATCATGGAAATCAAAGCCTCTGTCTGCTCATCAATTCTTTTTTCGGCAACTTCTTTTAATTTCCCGACGATTCCCTTTTTGGAATTTTCCTGAATGGAACGTATGCTGGATTCCGTACTGATTTGCAGAGCATGAATTTTCCCGTTACGGTTTTGTGCGATAAGCTGTCTGAAAGAATCATGCACCTGTAATTTTTGCTCAGGGCTTAGAAAAGAATAGTTATAGGGAAGAAGTTCATAGTAGGCAAAGCATTCCCCGTCATTGTTCCAGACCAGATTGTTTTCAATATATTTAATGGGATATTTCATCGTATTCACTCCTGACTGCTGTAATTGCTTCCTGCATATTGTTTTTTCTTAAATGTATGGTTTTGCCTGCATAAGTCAGCTTCGGTCTGAACCAAAAGGAAATTACCGACTTCAAAAATCCGTAAGGCTTTTTTCCGTCGAATGTTTTCTGGCTCATAAACCAAGTCAGGACGACCGGGATTCCAAAATATTTCAGGAATGCCCCATCAATAAAAGACAGTGGCGGAAGATTCCCAAGAAGTATGACTGCAAATACAGACACCACAAACCATGTCATTTGCGTAAAGGTGATAGGGAAAGGCAGCTTAAAGTCATTGATAGAGTAAAGCACCTTTTCCACCGACCAGATATTGGTATAGCTTCGTATTTTTTTCATTTTTATTTCTTTATCCTTTCATAAAAAGGGATAGTTTTTGGACTATCCCCTTAAGTCAAACCAATCTGTCTGTGTCATCAGACATCAGTAGATAATTTCAAAAATCCCACGGCTTGCATGGATAAAAGTTCCTGAAAGCTCTAAGTCACGCCCAAAGGATTCATAATCAATATAGTTTTGCAGACTTGCCGGAACTTCACCAAGCATACCCGTTTCCTCAATGTAGTAGCGTGCCACATCTGCCATATCATCACAGCCGGAATGCAGAATAATATCGTCCTGATGTTCGCTTAATTCTTCAATGCTGGGAAAGTGCGTAAGCAAGGCGGAAAGCTCTGACTGTAATTCTTCGGGCAGATCACATACCAGCTCATAAAGATGGTTCAGTTCTGCAAGGGAGGTGTATTCGTCAATGTCAAAGGGCAGCTCGTAATCATGAATGGCGTATTCCTCATACTCATCATTCAAGCCGATTTTTTCTTTGACTTCTTCAAAATCTACGGGGAGCTTAAACCAAGCTCCCACGAGTTCCCCCTCGTTATATTTGCCGAGGTTGGCAATATATACCTGCATATCGTCCATTCATTTTCCTCCTCTCTAAGCTCCAATAATTTTATTGAACAGCTCCAGTAAAATGTCCTTGACACCGGCTGCGTTGAATACCAGTCCTACTGCAATAATCGCAATGATAAGAAAGCCGATAAGTTTGGAAAATTCACGCTTAAAGCCAAGATATAAGCCAATCACAACAATAGCTAAAAGCACCAGTGATTGTGCGTTCGATAAAAACCAGTTATAAAGATTTTGTCCAAAGTTCATTGAAAAATATTCTCCTCTCTGTTAAAAATGAATTTGTGTCATACAATGACATTTTTGATATTTGCTGACTGTTGTTTGAGAATCTGCTTATGCTTGTCCGTCAGCTTTGCATGTGCAAGCAGAGTATTTACCGTCTGTGTCTGATTGATTTCGTCCAGCTTTAGTGCCACCTTTAAGGTAGGAGCGACCTGACGAGCCAGCCAGTTTAGCGTTCGCTCATAGGTATAGGGTTCCGGTTTTGTCGTGAGTTTTAAGCGGTCACGGTGATTGCCGATAAACCAAGCCCATTCATCATTCAATTTCCAGTCACAGCGAGGTCTGTTATCATCCCTGTCTACAAAACGGATATAGCGGTTGATAATCTTAAAGGCGGTCTGCTCCGGATTGTCAAAGATAAGCAGGTCACGAACGGCATAATAGGCACGCTCATTTTTCAGACGGATTTCAAAGCGGTTTTTCACTTCCGCTTCACGGATGGGAATATGATTCTTCCTGTACTGCTCATAGTCCTTTTCATAAATGCAAAAGTAAACTTCGCTTTGAAGAGAACCAATATAGAGAGTATTTCCCATACATTCCTTTTCATCTTTGCGTACCAGTTCACCGCTTCGGTAGCTTTTGAAACTGCGAAAGACGGAGATACATTCCTCATTCCTGCATTTTTCGGTAAGCATGGGAATATTCAAAATGCCGGTTCTGTCATTGATGGCTAAATCCAGTCGCTTCATCACACCGCCAGCCGATAAGGCGTCCATGAAAAATTCATACCAGCTTCGCTCCTGTGCCAGAAGATAGGCTTCAAACTGTCTGCACCCACGTCCCTTTAGTTCTACCAGCACACCCTTACTAAGCTCCGATGAACAGAGAACAAATATATCTCCTAAAGCGTAATGCTCCGAATAGGAGTAGAAGCCGTAATCCTCATGAAGAAAATAGGACAGCTTTAATCGCAGGATTTGTTCTACCACATATCTGACATCTGTTGTCGGAAAGCGAATCCTTACATAGTCAAAAATAAGCTCAAGCGGAGAGTTAGGATTGAACCGTTCCAAGGTTTCAAAGAGTACATGTTCCAGTTCCTTTGACGGTATGACTTTCCCTGTTTCAATATCACTTAAATACTGCCTTGTAATACCTGCTCCGGTTGCCAGACGGCTCTGTGAAATACCATAAGCCAATCGTGTTTCTTTTATCTTTTCGATATGATTTTCTTTCTCCAGTAAAATCCCTCCTGTCTAAAAAGGCAGATGTCAACTTTGAAAGCTCACTTGACACCTGCCGTAATTTCTATAATCCCTTGTCCTGTAAAGAATAAGAGATGATAAATAAATTGTTTTTTGTCGATTTGTACCCCCCTGTTAGATACGGGGGGTTGAATGGTTGGCGTGGCTGCCGCCACACCAACCGGCAAACCGTCCGCACGGCAAGGCTTACGCTTCGCACGCCTTTTGTGCGTCCTGCCTGCCGTCTGTGAGTTTCCGTATCTCCTCTAAAAAATCATGTCCTTTGGGAACAAGGGGCGTATAAAATTCAGATATGACGCTTGTTCCCACATCAACATAGCCACGCCCTTTGATTTGTTTTGAGAAGAAATCCTTTTGCACATCACTTCCAAACATCATGCCGTATCCCATTTCAGACATACGACCTAAAGCTACTCTGAAATGAAACTGGTCACGGATTCCGTCGCCAAGGTATTTTGCGTCCGGTCTTTGACAGGCTAATATTAGGAAAAATCCTGCCTGACGACCTAACATGACAATCTGCTTTAATTTATTTAAGACGGCAGTATTCTCCTTTGTTCCCAGCATTTCCATAAAAGCGACATATTCATCAAAAATCAGGAAATGAGCCGGAAGCCCCAAGTAGGAATAATTTTCGCCTGTTTTATAGTTTTCCATTTCTTTCATGGCGAGGCTTCGCTTCACCATTTCTTCATAGAATCTGTCAATGCAGGAAAGGATATCTTCCTTTTGAAAATACACCTCTTTCATAACAGAGCCTAAGTCGGCAAGATCGGCATTTTTCGGGTCAAGGATATACAGCTTTGCATTTGTACGGAGCAGGGCTTCAATCAGTGTCAGGATAAAATAGGTTTTACCGCCGCCTGTACCACCGGCAATTAACATATGAGGGAGCTTGTCATATTCCCACCATATATTTTTCATAAGGCGTAGCTTTCCGCTTTTTGCCTGTACCTCGTCAATGGAAATACGATTGGCAATCATGTCATAAAGCAGGGTATATTCCACATAGGAATCTTTCAGCTCCTTTTCGGTCAGCTCACAATATAAGCCGCTCTCCAGCTTTTTCTCCAAATGCAGGAGCTGTTCCTGATACTTGCCCAGCGTAATTTCTACACGTATCTGAATCAGACCGTTTTTCATGCGGTAATAGACTTTCGGGAAGTAGCTTATCTTTTCTCTTGTCCGGCTGGAAGAATCTTTAAAAATCCCCTCTGATTTTACCTGCTTTGCTTCATACCATTTGTTTTCCAGTATCATTCTGGCTAATTTCTGACGATGATAGAGCTGTTTTATCCAGTCATAGCGATAGCGTTTAATCACCAAAACAAGCAGCAGGCAGATAACACCGGAGCTAATACAGCTTATGGAAAGATAGGGAACATTGATTTCACCTGCTTTTGGTAAATGAAAATCCTGCCAGTTTATCTCTGAGATTGTCTTTGCATGAAACAGGGCAACAACAAGAATAAAAACCGGCAGGAATATTGATACGGCTGTATGAAAGACCAAATCCTTATCGCTTGGTCGAATCCGTTTACCGGAAAGAAGCCACTGTTTCATGTGCCTGTTTCTCCTTTCGATTTGCGTTCTTTACCTTACTTTTCAGATATGGGTTCTTTTTTAGGAGCTTCCCTCTTGAAATTTCCTGAATCCTTCGCCGGCACAATATCATCTGCCTTGATATACCAGTCCACCTCTGCTCCCTGAAAGGTTGCGGTCGCTACCGTATCGGCTACCGGATTGATAAGCTCTACATGTGCGTTATAGTCAAATTCTTTCAGCGGAACGCTTGCAGGAATGCTCACCTGAATCATTCGTCCCTGTCCTTTGGATTTGAGGTCATAGGTACGCTCCTTAATTTCTTCCGAAAGCGTGCCATCTTCCTTTTGAATGCGTACCTCACGGCGAAGTGCGGAGAATTTCAACTCTCCAAATGTCGCTTCCTTTTCTAAGACGATACCGTTTGCTAATCTCATTTCTTTTCCTCGCTTTCTATGCCTTTATCATGTCGTCGGCTTCCAGAATGTAATTGGTAAATCCTCGTGTGCCGATTTTATATCCCTCTGCTCTGATACGGGGATGGATGAGTTTTACTTTTTCCTCAAAGGCAAAGTTCTTTTCGCCTGCTTCTGCCGGAAGTATCACGATAATATCGTCTGCTCTCTGCACATCGGAATAGAGGTTGTAGCTTCTTGATAAGACCGTAAGCTGTCCGTTGATTCTTCTTTGTATGACTTTATCCTCACCGGCAAATTCTAAGTTTCCAAAAGTCTTTTCCATGTTGGGAATAACAAATTTTAGTTCCAT

Protein sequences of DBSCAN-SWA_3

>CP027241|1436714:1452880|1450756_1452133_-|AVM68936.1|DBSCAN-SWA
MKQWLLSGKRIRPSDKDLVFHTAVSIFLPVFILVVALFHAKTISEINWQDFHLPKAGEINVPYLSISCISSGVICLLLVLVIKRYRYDWIKQLYHRQKLARMILENKWYEAKQVKSEGIFKDSSSRTREKISYFPKVYYRMKNGLIQIRVEITLGKYQEQLLHLEKKLESGLYCELTEKELKDSYVEYTLLYDMIANRISIDEVQAKSGKLRLMKNIWWEYDKLPHMLIAGGTGGGKTYFILTLIEALLRTNAKLYILDPKNADLADLGSVMKEVYFQKEDILSCIDRFYEEMVKRSLAMKEMENYKTGENYSYLGLPAHFLIFDEYVAFMEMLGTKENTAVLNKLKQIVMLGRQAGFFLILACQRPDAKYLGDGIRDQFHFRVALGRMSEMGYGMMFGSDVQKDFFSKQIKGRGYVDVGTSVISEFYTPLVPKGHDFLEEIRKLTDGRQDAQKACEA
>CP027241|1436714:1452880|1448114_1448507_-|AVM68932.1|DBSCAN-SWA
MKKIRSYTNIWSVEKVLYSINDFKLPFPITFTQMTWFVVSVFAVILLGNLPPLSFIDGAFLKYFGIPVVLTWFMSQKTFDGKKPYGFLKSVISFWFRPKLTYAGKTIHLRKNNMQEAITAVRSEYDEISH
>CP027241|1436714:1452880|1448591_1449089_-|AVM68933.1|DBSCAN-SWA
MDDMQVYIANLGKYNEGELVGAWFKLPVDFEEVKEKIGLNDEYEEYAIHDYELPFDIDEYTSLAELNHLYELVCDLPEELQSELSALLTHFPSIEELSEHQDDIILHSGCDDMADVARYYIEETGMLGEVPASLQNYIDYESFGRDLELSGTFIHASRGIFEIIY
>CP027241|1436714:1452880|1438014_1438218_-|AVM68923.1|DBSCAN-SWA
MNQAYVPIWERYTLTIEEAAKYFRIGENKLRRLAEENKNAGWLIMNGNRIQIKRKQFEKVIDTLDVI
>CP027241|1436714:1452880|1449104_1449326_-|AVM68934.1|DBSCAN-SWA
MNFGQNLYNWFLSNAQSLVLLAIVVIGLYLGFKREFSKLIGFLIIAIIAVGLVFNAAGVKDILLELFNKIIGA
>CP027241|1436714:1452880|1452565_1452880_-|AVM70469.1|DBSCAN-SWA
MELKFVIPNMEKTFGNLEFAGEDKVIQRRINGQLTVLSRSYNLYSDVQRADDIIVILPAEAGEKNFAFEEKVKLIHPRIRAEGYKIGTRGFTNYILEADDMIKA
>CP027241|1436714:1452880|1445683_1448131_-|AVM68931.1|DBSCAN-SWA
MKYPIKYIENNLVWNNDGECFAYYELLPYNYSFLSPEQKLQVHDSFRQLIAQNRNGKIHALQISTESSIRSIQENSKKGIVGKLKEVAEKRIDEQTEALISMIGENQVDYRFYIGFKLLFGEQDVSVREFTKEAKNAALDFIYDVNHKLMGDFVSMSNDEILRYSKMEKLLSNKISRRFKIRPLNKDDFGYLIEHIYGQTGTAYEDYTYHLSKKKTDGETLVKYYDLIKPTRCLIEEKQRYLKLEQEDRTVYVAYFTINSVVGELDFPSSEIFYYQQQQFTFPIDTSMNVEIVANKKALGTVRNKKKELKDLDNHAWQNDNETSTNVADALESVSELESSLDQSKESMYKLSYVVRVSANDMDELKRRCDEVKDFYDDLSVKLVRPFGDMLGLQGEFLPASKRYMNDYIQYVTSDFLAGLGFGATQMLGEKDGIYVGYNLDTGRNVYLKPALASQGVKGSVTNALASAFVGSLGGGKSFANNLIVYYAVLFGAQALIVDPKAERGSWKETLPEIAHEINIVNLTSEKKNMGLLDPYVIMKNPKDSESLAIDILTFLTGISSRDSDRFPVLRKAIRAVTNSEVRGLLKVIEELRIEGTDTATSIAEHIESFTDYDFAHLLFSDGEVKQSISLEKQLNIIQVADLVLPDKETDFEEYTTMELLSVAMLIVISTFALDFIHTDRSIFKIVDLDEAWSFLQVAQGKTLSMKLVRAGRAMNAGVYFVTQNTDDLLDEKLKNNLGLKFAFRSTDINEIKKTLAFFGVDPEDEYNQKRLRNLENGQCLISDLYGRVGVIQFHPVFEELLHAFDTRPPVRIEV
>CP027241|1436714:1452880|1441681_1442593_-|AVM68928.1|DBSCAN-SWA
MKFINHNNNKKQLPKEKKPRIHKINPRRKIVIALWILLAVSFSFAVFKHFTAIDTHTIHETKVIEKEYMDTHNIENFVEKFSKVYYTWEQNSTSIDNRTKALKNYLTEELQALNNDTVRKDIPVSSSLQNFQIWSVKNTGNHTFDMTYSVEQLITEGESKKNVQSAYSVSVYVDSAGNMVIIKNPTITSIPSKSSYQPKIIENDGTVDSVTANEINDFLTTFFKLYPTATQKELSYYVTDGILKPVGKEYVFQELVNPIYNRKENQVTVSLSVKYLDPQTKATQVSQFSLTLEKNDGNWKIVK
>CP027241|1436714:1452880|1440923_1441562_-|AVM68927.1|DBSCAN-SWA
MVTKNFEKISDEKKEQIITKGIEIFSKFSFVEARTDLITHEAGISKGLLFYYFGNKKNFYLYLFKHTVDLLTQDLEYEGTYDNFYEIIFYMMDMKYNLITKYPNETKFLNMVSKETHKEVSKDIRNILSIYHKKSKEKSSKIILSAVKKLKLRQDIDTQKIIESLSLYIDAIVMKYLHLYQDKPMELFDNFHEFKKDVKEYLDLMIYGIVIE
>CP027241|1436714:1452880|1438899_1439322_-|AVM68925.1|DBSCAN-SWA
MKPSSFQTTIENQFDYICKQAMEDERKDYFKQLSRLAKHEVSFSEIGDYLVSQFATTDSYVTDFQIFMLNGISISIENDLLSEALRNLPSNKREILLLFYFMNMSDSEIADMLKVNRSTVYRHRTGGLAMMKKFMEEFEE
>CP027241|1436714:1452880|1439660_1439849_-|AVM70468.1|DBSCAN-SWA
MLLTEWLLCPICKSKTRIKLRKDTELRNFPLYCPKCKLETLVSIKEFKTTIIKEPDAKTQSR
>CP027241|1436714:1452880|1452168_1452549_-|AVM68937.1|DBSCAN-SWA
MRLANGIVLEKEATFGELKFSALRREVRIQKEDGTLSEEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNAHVELINPVADTVATATFQGAEVDWYIKADDIVPAKDSGNFKREAPKKEPISEK
>CP027241|1436714:1452880|1439854_1440889_-|AVM68926.1|DBSCAN-SWA
MNYKNPYEKLSGKLNNRKLVNAGFSEKTYDTGSVKLNYVVGPKNGPSLLLIPAQMGMWESYKKVLLPLSKIFQVYAIDVRGHGKSSWTPGHYSWKIIGEDIKIFIENVIKQKVIISGNSSGGIIALWCAANIPEYISGIILEDAPIFSAEMPRFKEQDKFVYNGLKHLVNQIGNIPDRDLANYFQNMEVPASDKRIKRIPNWFVSWLSRKIKKFQDKYPDSPVEIGFPDSLRLLIKSLSMFDPDFARAFVDGRFYDGIDHAEAFEKTKCPVLLIQADWKRYENYGLIGAFDDDDAHHAISLAPQIIYKKVSANHVIHTFKPKEYIKLLSEFREIVSDNSICNGE
>CP027241|1436714:1452880|1436714_1437932_-|AVM68922.1|integrase|DBSCAN-SWA
MSEKRRDRKGRILRTGESQRKDGRYLYKYIDSFGETRFIYSWKLVSTDRVPAGKRDCIALREKIAEIQKDVQDGIDVIGKKMTLCQLYAKQNAQRPNVKANTKTGRKYLMEILKNDKLGARSIDSIKPSDAKEWAIRMSENGFAYSTINNYKRSLRASFYIAIQDDYVRKNPFDFQLNTVIDDDTVPKTILTLEQEARLLDFAKSDTVYHKNYDEILILLKTGLRISELCGMTVTDLDFENHLILVNHQLLRNTELGYYIETPKTKSSERQVPMVEVTCQALKRVLAVQNQNECVEIDGYSNFLFLNRNGYPKTACDFNSILRNLIKKYNKCHEEKLPHITPHTLRHTFCTNCANAGMNPKALQYIMGHANITMTLNYYAHATCNSAMEEMKRLEKEQQARCLVL
>CP027241|1436714:1452880|1438672_1438903_-|AVM68924.1|DBSCAN-SWA
MKKNYPLVPFPLIVKAADGNSEAINQIIRHYRGYMTKRSLRLMKDEYGNQSMVVDEVLRGRMETRLITKILSFEIK
>CP027241|1436714:1452880|1442607_1443609_-|AVM68929.1|DBSCAN-SWA
MKLKHLLIGFSCFFVVVFSLLLFITILSSDEQDGGFGNSQFGGATVSMEVLAHKPMVEKYAKEYGVSEYVNVLLAIMQVESGGTAKDVMQSSESLGLPPNSLDTESSIKQGVKYFSELLAGSKRLEVDFDCVIQSYNYGGGFLDYVARHGKKYSFELAQSFAKEHSGGVKVDYPNSIAISMNGGWRYSYGNMFYVALVKQYLVTSQFDDETAQAIMNEALKYEGWKYVFGGSSPTTSFDCSGLVQWCYGKAGISLPRTAQAQYDATQHISLSEAKAGDLIFFHSTYNSGTYITHVGIYVGNNRMYHAGDPIGYTDLTSSYWQQHLAGAGRIKR
>CP027241|1436714:1452880|1443605_1445681_-|AVM68930.1|DBSCAN-SWA
MKQQNIAKVVKRIGKVILIAGAILIATLVFLSVVGTVVHAAGLVDDTVNTANEYSKYPLSNYQLDFYVDNSWDWLPWNWTDGIGKQVMYGLYAITNFIWTISLYISNATGYLVKEAYSLDFISSTANAIGKNMQTLAGVTSYGLSSEGFYVGFLLIFILVLGIYVSYTGLIKRETTKAVHAIVNFVLVFILSASFIAYAPDYIAKINDFSSDISNASLSLGTKITLPDSEAKGKDSVDLIRDSLFSIQVKQPWLLLQYGTTDIDSLGTDRVENLLSTSPDSNNGEDRENIIKEEIEDKDNANMTITKTISRLGTVFFLFFFNIGISIFVFLLTGIMIFSQILFIIYAMFLPVSFLLSMLPTFEGMSKRAITKLFNTILTRAGITLIITVAFSISTMLYSLSAGYPFFMVAFLQIVTFAGIYFKLGDLMSLFSLQSNDSQGVGSRMMRRPRMLMHAQMHRLQRTLGRSMTAYGVGSAIAGKRNQKRDGLTHSPKTQADHSRPQSEHSASLGAKLGQGVGTIADTKDTIAASVNQFREQVTDLPTNARYAVFQGKNKIRENMNDFTGGITQARTHRADRRNQEQEARRQTIAERRLRMEMAKSENSVASSVHERPIIRQERTAQKQEPQKTIREFQSANIQEWSVQRASRLKENSTPLKAKRQAPVISRTQTVNTKSRPLQTARIKKDQGKPS
>CP027241|1436714:1452880|1449364_1450552_-|AVM68935.1|DBSCAN-SWA
MLLEKENHIEKIKETRLAYGISQSRLATGAGITRQYLSDIETGKVIPSKELEHVLFETLERFNPNSPLELIFDYVRIRFPTTDVRYVVEQILRLKLSYFLHEDYGFYSYSEHYALGDIFVLCSSELSKGVLVELKGRGCRQFEAYLLAQERSWYEFFMDALSAGGVMKRLDLAINDRTGILNIPMLTEKCRNEECISVFRSFKSYRSGELVRKDEKECMGNTLYIGSLQSEVYFCIYEKDYEQYRKNHIPIREAEVKNRFEIRLKNERAYYAVRDLLIFDNPEQTAFKIINRYIRFVDRDDNRPRCDWKLNDEWAWFIGNHRDRLKLTTKPEPYTYERTLNWLARQVAPTLKVALKLDEINQTQTVNTLLAHAKLTDKHKQILKQQSANIKNVIV

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1436415:1436430	attL	NA	NA	NA	NA
AVM68922.1|1436714_1437932_-|integrase	site-specific integrase	A0A1S5SEW7	Streptococcus_phage	4.9e-185	79.2
AVM68923.1|1438014_1438218_-	helix-turn-helix domain-containing protein	A0A1S5SF07	Streptococcus_phage	2.7e-27	88.1
AVM68924.1|1438672_1438903_-	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	2.6e-31	86.8
AVM68925.1|1438899_1439322_-	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	8.5e-60	82.1
AVM70468.1|1439660_1439849_-	conjugal transfer protein	D0R0F6	Streptococcus_phage	2.2e-15	61.4
AVM68926.1|1439854_1440889_-	alpha/beta hydrolase	NA	NA	NA	NA
AVM68927.1|1440923_1441562_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AVM68928.1|1441681_1442593_-	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	1.1e-128	73.9
AVM68929.1|1442607_1443609_-	peptidase P60	A0A1S5SEZ8	Streptococcus_phage	2.4e-153	79.0
AVM68930.1|1443605_1445681_-	hypothetical protein	A0A1S5SF30	Streptococcus_phage	1.1e-237	65.3
AVM68931.1|1445683_1448131_-	ATP/GTP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	87.4
1447270:1447285	attR	NA	NA	NA	NA
AVM68932.1|1448114_1448507_-	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	4.5e-55	80.8
AVM68933.1|1448591_1449089_-	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	1.8e-77	83.6
AVM68934.1|1449104_1449326_-	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	9.6e-31	98.6
AVM68935.1|1449364_1450552_-	XRE family transcriptional regulator	A0A1S5SEX3	Streptococcus_phage	2.9e-190	81.4
AVM68936.1|1450756_1452133_-	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	7.7e-219	82.0
AVM68937.1|1452168_1452549_-	DUF961 domain-containing protein	A0A1S5SF96	Streptococcus_phage	8.5e-51	81.9
AVM70469.1|1452565_1452880_-	DUF961 domain-containing protein	A0A1S5SF38	Streptococcus_phage	5.5e-48	88.3

Sequences of DBSCAN-SWA_4

Nucleotide sequences of DBSCAN-SWA_4

>CP027241|1579540:1590516|DBSCAN-SWA
CATGAAAGATTTTACCACAAACATTCGAAAAGTGACTAAAGCGGTCAGCCGACAAGGGTTTGGCTTAATTTTGCTTCTGGACATGGAGCACGAAGTGCCTTATACCATTTGTGGAAGTATGGCGGAGGTTGGAGAAGTCGTTCCGGTAGGAAGTAAGGCTTATCAGATTGCTGGCCGTATTTTTGCGCAAAAGCCAAGGCCGGAGAAGTTAGCGATTGCAGGGAGCACCCAAAAAGAGTTTGTTGCTGGGACAAAAGGGAAATACACTTTGACCATTGCGACCGAGTTTACAGACGGCGATATTATCAGCGTAAACGGAGTAAAATATACTTGCCGTGCTTCCGGTGCAGTGGCGGAGAAAAACGAGTTTAATAGCGGCACAAAGCAGGTTGAGGCGCAGGTATTAAAAGAACTGATAGAAAAAAATGAGACCAGCTTTTCTCTTTCTACTACAGCAGACACCGTTGTTTTTACGCAAAAAATTGCAGCTATAGGAGAGATGCCTTTTGTCGAAGTTACTGGCAGCGGAAAAGCGAATATTGTTAAAACTATCTCCGGTGAAAAAGACAAAGGAATGATTGCCTTATTAACTGAGACAGCGCAAAAGCATAAAGATTTTTTCTTTTTAGTGTCAACGGAGAATGCGAACGAGGATATTCGGCAGCTCAGTGCATGGATTGATACGCAGGAAAAAATGTATTTTGTAACCAGCCAAAGTCTTTTAACACCAAAATTGCTTGCGTCGGAGCAAACGGTTGTTATGTATCATGATAAAAATAATGCTTATGTTGCTGAAGGGCTGGCGGCTTACCTTGCCACTGCTAAAATCGGCGGAGTGACCGCTAAGTTTAAGACGATTGCAGGTGTAAGCGAAGCACAGATTTCAGAGACAGAGTTAGAGGAACTCCATAAAAATAACGGCTTTACCTATTTAGAAAAAATGGGTATTTTACAGACCAGCGAAGGAAAGACGACAAGTGGAGAGTATATTGATATCGTTTTGGGTTCTTTTTGGATTAAGGTTACAATGGATGCGGCAATGGCAAGTTTGGCTGCGCAGACGGAAAAAATCAACTTCGGCAATGACGGGATTGCAAAAATGGTGGCGGTTTGCAAAAGCGTATTAAACCGAGCGGCGGAAGATCAAGGAATTATTGAAAAAGATGAAAACGGCAAGGGAGTCTTTGAAGTAAACTATCTGCCGAAAGAAAAAGTAGACGGAAATGACATTGCCAACCGCCGGTATCATCATGTAACATGGACAGCCAAGTTGGCTGGAGCAATTCATACTGGCATCATTAACGGCACGTTAGAGTATTAGGAAGGAGAAAACGATGACTTACGATGTAGAAAAAGTAAATGTTGTAGTCGGCGGCGTAGTACTAACGGGTTATGCCGAGGGCAGTATGGTATCAGCAGAAAGAAATGAAGACAGTGTGCTGCCACATGTCGGAACAAAGGGTGAAGTTGCTTATGCAGAGAATGCCGATCGGACAGGAAAGTTTACGGTAACCTTGGCAGAAACTTCCCCACATAATATATATTTAAACCGGTTAGCGACTACAAAAAATTCGCAGGTTGATGTTGCAATTGTAAGCATGAATGATCATGCAGTGCAAGTAACTGGTACGAACTGCCGGGTATTAAAACCGGCGAACGTGGAAGTTGGCCGGGAAGTCGGCGAAAGAGAATATGAAATTTTTGCAGCAGTTATGAACTTTGAAGAAAAATAGGAGGTTTTCGTATGAAAATTGATGAAGCGTTCGGTTTTGAACAAAAAAAGATTTGTGTTGCCGGAAAGGAATATACTTTGCAGAATATTCCGCTAAAAGCAGTTTATCAAATGCAAGAGAGAGCAAAAGACAAAGATGGAAATATGAGACCATCCATTTTTTATGATGAAATTTTTGACAAAATTATTCTTTCGCCAAAAGTTTCCTGGGATGATTTTAGTGATGTCGAAGAACTGGAAGAACTCATGACAGAGGTGTATTCGTTTCTTACAAGGAACCGGAAAAGAAAGATGGAAGGCGAAAGCGAAGAGTAATTGGCTGTTTTGGAAGTTGATATTTAGCGAAAAGTTTAGTTATGAAGAGGTTTCCCGCATGAGCTTTGCTGAGATTATGGAAGCACATGCGGCTCTTTTAATTTATGAAGATTTGCTGAAGAAGAAAGCAAAGTAGGAAGGAGGCATTATGGACGTTCGGGAAGTCAGTTTTCATATTGAGTTTACCGGGAGTTTTGAAGAACTTGCCAAAGCTGATAAAGCGGTGGATCAGTTTAAAAGCAATATGCAAAATCTGGGAAAGACGACGGATAATGCCTCTAAAGACATGGGAAAGGCGTTTGAGACTGTTTCCAAAGAAGCAAAAAAGGCCGGTCAAAGTACAGAAGAAGCAAAAAAAGAAGTCATTAGTCTAAAAAAAGACATTGCTAATTTTGTTAGCAGCAGTAAGATTACCAAATTAGGGCAGTCAGTTAAAAGCAACATTGGAACTGCTTTTGAAAAAGCGACGGGAAAGGCCAAAGGAGCGCTGGAATCTTTTCGCACAAAGGCAGGGGAAAGCTTGTCAAAAGCCGCTTCCAAAAGTCGGCTTTTAACGGGAGCGCTAAACGACATCAAAGCAATCGGAACCAAGGCGGCGGATACAGTAAAGTCTAAGATGGACGCACTGGGAAAGACAGCGGCGCAGACTGGTGAAAAAATCGGACAGGCTTTTAAAAAGGCGGGCGAGGTTACGGATAAAATCGGGAGTACCCTAACGAATAAAGTAACCAAGCCAATTCTTGCGGCAGCTACGGGAGCCGGATTTTTGGGGATGCAGTATGAGCAGTCCATGGCGGAAGTACGGGCGATTTCCGGCGCAAGTATAGAGGATTTTGGAAAATTAAATGCCGCAGCGCGGGACGTTAGTGCGAATCCTCTTTTTTCTGCAAATGAAAAAGCGTCCGCCCTAAAGTATATGGCCATGGCTGGCTGGGATGCGCAGCAGTCGATTGCCGGGCTTCCCAGTATTTTAAATCTGGCTACGGCCTCCGGGGAAGACTTGGGGAGCGTATCGGATATTGTGACGGACGCGATGACGGCCTTTAAAATGGCAGCAGAAGAAAGCGGCCGGTTTGCAGATGTTTTAGCCAAAGCCTCCAGCGTATCGAATACCAATGTGGCCTTATTAGGCGACACGTTTAAGTATGTGGCGCCGGTTGCGGGGGCGCTTGGCTATTCGGTGGAAGATACCGCTACGGCAGTTGGCCTGATGGCAAATCAGGGAATTAAGGCGAGCCAAGCGGGTACAGCGCTTAGAGCCGCTCTGGCTCAGTTAGCTGATCCGTCCGAGGAAACGGTAAAGGCAATGGAGGAACTCGGAATATCCTTAGTAGATGACGCAGGAAATATGAAACCGTTGTCGGCGTTAATGGTAGACTTAAGGAAAGGCTTTTCCAATTTAAGCGAAGCGCAAAAAGCTCAGTATGCCTCTTCTGTTTTTGGCCGGGAAGCCATGTCGGGAATGCTTGCCATTATTAACAGTTCGGAAGCGGATTTTAATAAAGTGGGGAGCGCTATCCGAGACTCCGGCGGCGCGGCGCAGGAAATGGCTGATATCATGGGAGATACCGTGCAGGGTCAGCTTAAGGAGTTAAAAAATCGAGCGGTTGAACTTGGACTGCAATTTTTCGACACTTTTGGCAAGGACTTAAAAAACGCCTTGGATTCAGTGACAAAAAAACTGAAAGAAGGAATGACCGCCTTTTCTAAATTGGACAGTCAAACCAAAAAAAATATTGGGAAAATGATTGCCTTAGCGGCGGCGATTGGCCCAGTTGTAAAAGGACTGTCAGTAGTATTTAAAGTCGGTTCTTTTCTGGCTCCTCTTTTTGGTAAAATTGCAGGCGCGGCCGGGTCCGGCGGGCTTGGCGGGGCGGCAGCAGCATTGGGCATTGGGTTAGGGCCGTTGATTGGAATTATTGCAGGAGTGGCCGCAGCCGGCTATTTACTGTATAAGAACTGGGAAACGGTAAAGGCAAAGGGAATGGAGTTTATTGAAGCAATCAAAGCAAAATTCTCTGAGTTTGGGCCGCATATTCAAAATTTGTTTTCCAATGTTCAAGTTATTTTAGGTGTGGTACTGCCGGTTGTAGAAGGTTTTTTTGGTGGGGTTTTACAAATGCTAGGGAAGTTGGCACTTGATTTTACGGATGTTATTGGTGGTGCAATTAAGCTCTTGTCCGGATTTACAGACTTTTTAGTGGGGGTCTTTACCGGCGATTGGAGTAAAGCATGGGAGGGCGTTAAGAGTATATTTATCGGTACTTGGGAGATGATCTCCGGCGCACTTAGGGGTAGCATTAATTTTATCATCGGTGGAATCAATGCTTTTCTGTCCGGGTTAAATAAAATAAAACTTCCAGACTGGATACCGGGAGCGGGCGGAAAAGGAGTGAATATTCCTTTAATTCCTACTTTTGCGCAGGGCGTTACTAATTTTAGCGGCGGTATGGCGATTGTAGGTGAGGAAGGCCCGGAGTTAGTTACCCTGCCAAGAGGCGCGAATGTATTTCCTAACCGAAATACAGAGCAAATACTTGGGAGCAACATGGTATCTTTTGAAAAAATGCTGTTGGAAAAAAGTCGATACTCGAATGATGCACTGGAAAGTGGCGGCACCTATACAACCAATAGAAATAACCGCAGCATAAAGTTTGCACCGGTAGTAAACATATACGGAGCCGGTGAAGGGCGGGAGATGGCGCAAATGGCAAAAGAAGAACTGCGCAAGCTCTGGGAAGAATTCATTGATGATGAGGACTTAGCGGGTTAGGGGGAGGAGAATGAATGCTTCAAAAATAGGCGAGGTCATTTTTACGGCAACGACAGAAGAAACGGTTAGTTATGAAAATGAAATTACAGAAAGGCCGGTAGAAGATTTGGGCTATATTTCCGATCATGTCAGGCAAAAGCCCATTAAGTTTAACGTATCGGGAGTTTTGGTAGGGGAAGAGGCGTTTTCTCGTTTGATGAAGTTAAGAGAGTACAGCAAAGGGAAAGAGACACTTCAGTATTATGGGCGAAATGTCTTTTATAATGTGCTCATCGAAACACTTGAAACCGGACATAATAAGGAAACCCGGAATGGTTTTTCCTTTCATATGTCCTGTAAAATCGTGCAACAGGCCGTAAAAAAGGAAATCATAAGAAACCAAGCCATTAACGCGCAAGTAAAGGAAGTTACTAAGCAAGGGAAGATTACGGTCATGCAAAAGCCGGTAACAAAAAAGAAGAAAGAAAGCATCATGCAAAAAGGAGCAAGGCAAGAAGAATGAAGGAAATAGAACTGGAAGAAAAACAAAGGGAAGAAATATCATATCTTCCTTTTCCCAAGGGAAAAATCCCATGCGAGGCGGAGTTCGATTATCAGGGACAGAGTTTTCTTTTGGTCTTTTTTTATAACGAAGCGTATGATTTTTTTACTGCCGACTTATATCGACTGGAAAATATGGAAAAAAAGCCGGTTAAGTTAGGGGAAAAGATCGTGTTAAATCAAAGGCTGTTTGAGATAGAAACCGAATTAGACCGGAGTTTGCCGGTAATTGTGCCGGCGGCGTTTTTTGAAGAGAGAAAGGCGGCCAATTGGGAAAGCATGGGAAATGGAGTAGAACTGGTGGTGATAGAATGATTTTTAACCGCAGAGCGCAAATACGGCTGGGACGCTTGGAATATGAAAGCGAAACGCTGGACTTTGATTTTTTTGTTCCTTTTTCTACAGAAATGGAGCCGGATATATCAGAAATATCCCTGTATAATCTATCTCCGCAAACCATTGCGGAAATAAAAAAAGGAATGCCCGTGGAACTTTTTGCCGGGTATGGGGAAGATATGGGCCTTTTGTGTTTGGGAGAGGTCTTAAATTACAGCACAAAAAATGAGAATGTTGATAGAAAAACAACGTTAAAGGTTGGAAGCGGCGCGGCAGCGTGGGCGGAGATGGAGATTAATAAGACTTATGCGGCCGGGATAACTTCACAGCAGATTTTACAGGATTTACTAAAGAATTATAACCTTACTGTTGCTGATATTACATTAAAGCATAACGTCAAGCACAGAAAGGCCAGAACGCTTAGCGGCAAGTTAAAAAATATTATTCAAAAAATTGCTAAGGAAACGGAAACAAAAATTTATATCAATCAAGAAAGAGTTTTTGTTCGGCCAACGGAAAAAGGGGACAACAAGGACTTTTATTTATCGGGAGCAACTGGTCTTTTGGGAAGCCCGGAAAGGTGCGAAGTTTCCGAAGGGGAGACAAGGAAAGAAGGGTATAAAATTCAATGCCTTTTGAATCACCAGATCACAACGGACAGAATTGTTGTAATTCAGTCCCAAATGGCAGAAGGTAGTTTTAGAGTAGTAAAGGGAAGCCATAACAGCAGGGAATATATAACAGAAATGGAGGTGCTGCCATGGCAGGCTTAGCAAAATTTGTCAATAAAAAAATAGAAGAAAAATTAGGAGCAATTCATACCCTTTTCTTAGGCAAAGTGGTGGCAGTAAATCCGCTGATTATCTTACCGCTTTTCGGGAACAAAACACAAGTGGAAAAGCCGATGCTATTGGGAAGTGCGGTTTATGAAGTTGGAGACATTGTGCTTTTAGGTGTTTTGCAAGAGTATGCGGAGGGTGGCATAACGCGAAGATTTGATTTATCAGATGCAGTAGTCTTAGGGAAGGTATTTAATTTATGAAAGATTTACAGGTAAAGGGGAATGACCTTGTGCTGGAAAATGGGGATTTTAAAATAATATCAGGAGAGGATGAGATTTTGCAGTCCTTAGAAAGGATATTGACAACGAGAAAGGGCGAATGGTTTTTAAATGAAGAGATAGGCCTTGATTATTCGGAATTAGAAAAGAAAGAAGTCGACCAGGAACTGCTGCGGCTTTCTGTTATAGAAGCGGTATTGCAGGAAGAAAGAGTGCAGGAGGTTTTGGATTTAATAATCGAATGGGACAGGGCTAAAAGAGCGTTAAAACTAAGTTTTAATCTGGTTTTAAAAGGGAAAGGTGATTTGTATGGCGGGCATTACGAAGTTTGGCTTTGAGAGAAAACGATATGCGGATATTGAAAAAGAAATGTTCCTTTCCGCAAAAGAAAAATGGGGAGAAGAAATCAATTTATCGGAAAAAAGCGCACTGGGGATATTGCTGCGGATTTTTGCGTGGAGCATTGCCAAAATCTGGCAATTAGGGGAATCTATTTATTTTCAATCCTTTCTTCGATATGCTGAAGGAATTCAACTGGACTATATTGCGGAAAGAGGTGGGATAAAAAGATTCCCAAAAGCAAAGTCTAAAGGTAAGCTGATCATTCGTGGGAATACAGGGAAAGAAGTTTATCGTGGATTTCAAGTACGAACAGAAAGCGGAAAGGAATATCAGGTAACAAGGCCGGGTGTTATTTCGGAAAACGGAACGGTTGTTCTTCCGGCAGAAAGCCTGCTATGTGGCTCAGAGCAAAATGCAGAGGTTGGAGAAATAACGATAGTCAGTTATCCAGAGACGGGGATTACTTCAGTAACAAATGAAGAAGCATTCGTGGGTGCAAGAGAAGAAGAAACGGATGAAGAATTAAGACGCCGATATAAGGCGGGTTTAAAAAACAAAGGAAAATCAACGATTGCTGGCATTGAAAAGCGGATTTTAGAAAATCCTTCCGTAAAGAGTGTAATCATTGAAGAAAACGACACGGAAACGGCGAATTACGGTATACCAGCGCATGGAATCCGGGTGATCGTGCAGGGCGGAAGCGATGAGGAAATTGCCAGAGCGATTTTGGAGTCGAAAGCGGCCGGTATTAGCACGGCGGGCGCTGTGGCGGTAACGATACAGGATAACAAAGGAAAAAGCCGGGTAGTGCGGTTTCAAAGAACGACAGCAATCATGGTTTATGCGGTGATTAGACTGTCTTTTTATTTGGGCGTAGAAAATAAAGAGCAGCTAAAAGAAAAAGTACAAACGGATGTTTTAAATTATTTGTTGGGGCTTTATGCAGGGGAAGATATTGTAGTTAGCCGGTTAGTATCCCTTGTTATGGGAAATAAGGAAATTAAGGACGCGGCGGTCAAAATCGGCAAAACAGAGCAAAGTTTGGAAGCAAAAAATATTGTATTAGCCGAGGGCGAGACCGTTATCACGGACAAGGGGAAAGTGAAGGTGAGCGATGACCTTTAAAGAAATATGGCAGCGACTTCCTCAAAATTACAGAAAAGTAAGCGGTAATATGGAAAAACTATTAAGGGTGATTAGCGAGCAGTTTTATTTTGCCGCCTCAATGCTGCGCAGTTTATCAAGTTTGCCTTCCCTTGAAAAAGTAAGCGGTCAGACTTTAGATCTTTTGGGGGAAGAAGAAGGAACGGATCGAAATGGAAAAAGCGACGAGGAGTTTAAGCAAGTCATTCGGTTTCAAATTGCTTCCAAGGACAGAGGAGAGGATATCCATTCTCTTAATTCAGCGCTTGATTTTTATTTGCAAGCGGATTTTGTTGAAATCATAGAAGGCGACGCCAAGATAATCGTTGTGGCCGGCCGTTTTTTAACGGCAGAAGAAAAGAGAAAAATCAAAACTTTGGCGGCTGCCGGAGTAGGAGTTGACTTTAAAACGCAGCATACTCTATATCCAGCGAAGGGGAAGACAAAAAGTATCTGTTTAAGCGGGGAAGAGACAAAATTAGAAACCAGAAAGGGGTAAAAAGTGGCGCAGGAATTTTATACCATAATTACTAAGATTGGGCAGGAGAAATTGGTCAGTGCAACAACCGGGCAAAAATTAGAATTTTACCAGTTTGCGGTTGGCGATGGAAATGGGAGATATTATGAGCCAATGGTTTCTCAGTATGCGTTGGTTAATGAAAAGTATCGCGCGAACACAAATGCAACCACGATCGAAGAAAACAGAATTACCATTGAATGCCTGATACCGGCGCATATCGGCGGATTTACGATTCGGGAAATTGGCATTTTTGATAAGCAAGGAAGTTTGGTTTTAGTTGGGAAATATCCGCAAACGGAAAAACCGGTTGATTCATTCGGCGGATTAAAGGATCTTTATATCAAGGTTCAGCTTGAGGTGGATAACCCGGAAACGATTGCTATGACAGTAGACCCCAATGTGGTTATTGTAACCAAACAAAACTTGAATCAGGAGCTATCAAAGTATTTAAAGAAGAACGAAACTGTGAATGATCTGGATTCGTCTGACAAGGATAGACCGCTGTCAGCCGCGCAAGGGAAGCGGCTGAATGAAAATAAGCTGGGGATAACAGAAAAGGCCGCCGACAGCGATAAGCTGGATGGACAAGACTGCACTTATTTTGCAACATCGCAAAAAGCGGACAGTCTGGAAACACAGATTGAGCAGCTGCGGGCGGACATCCAGAATCTTACCCAGCAATTGAATAATAAAGCGGATAAAAATATGATTACAGCCATTCATTTACCCAGTGTAACTCAAGCATGGATTACAAATGCAGGAATGATTGAAACACAAGTGATTTTTGGCAGAACCGAAAAAGTTATGCAAAACATTGATGGTATTCCAATTTATGGGCAAAATGGGCAAACAGTTCAAGTGTCTGTTGGTATGCATGCGTTGATGTATAGCAAGACGGATCAACGATTTTACTTGATTTTTTAAAAATTTACCCATTCCGTCCAAGGACCATTATTGATTTTGTGCCGCCGTTGATATTGGCCATTTGTATTCCGGCGTTCCTGCCAAATCCAGTTGTCAATATTATTATGTTCCTGATTGGATGAGTTTTGTACTGTTAAAACTCCATAGCCAAAACCGGTTTCTAATCCGAATGTGTACCAGCCTGTTTTCAGGCATTCATCAAAGTTTTTTGTCCATCCGTGATAAATGAATGTATTAGCATTTTTATCCGCTTTATTATTCTAAAGCAGGCGAAAGATGGCATGCTATAATCATTGCAAAAAGGAGATAAAGAGGCAATGATTAAGCTATCAGATGAGATTTACAGGGCAATTAAGAAGTTTACCAATCTAAGCAGGGGGGAGTTTAAGCAGCTAACGAGAGAGGTGATGGAAAAATATGAGATAATCCCCAAAAAAGAACAAAAGGAATATCAGTTGTTGGTTTTGCTGGAAAAATTTCTGTTCTCTTTACGGACGGAAAAGAAGTCAGAAAAAACGATTGATGGTTATCGATTGCAGATTACGAAGTTCAGCGAAAGAGTAAATAAGGATATTCGCCGGATAAGTACAGACGACATCCGGGAATACATCAGCTATTTGGTCAATACCAGAAAGAACGCAGATGGTACAATTAATAATTACCTGCATATTTTGCAAAGCTTTTTTAAGTGGTGCATCGTAGAAGGCTATCTTAGCCAAAATCCCATTGCCAGAATAAAAATCAATAATTTTAAACCAAAAAGAAACAGGGTAGGATTAGATGGTGAGAAGCTGGAAGCGGTCAAATATGCTTGCGAGGATTTGCGGGAAAAGCTGATTATTGAATTATATGTTTCTACTGGTTGTCGGTTATCGGAAATTGCAGAGATAGACGTTAAGGATATAAATCAAAAAGAGCGCAGCATTGAGGTAATTGGGAAAGGGAATAAGAAAAGAACTGTATTTTGCAGTGAAAAATGCAAGTTATTAATAGAAGAGTATATGAAAAAAGAAGCAATTACGGATGGAGCGCTGTTACGAAGTAATAAAAAGCCGCATGGGCGGCTAAAGCCATCGGCAATCCAATCTATTATCAAAGAAATTGGCGAAAGAACCAATATTAAGCTATATCCGCACTTGTTGCGGCATACTTTCGCAACAAATAGCCGGAAGCATGGAATGAGTTTGGAAACTATTCAAATCTTGCTTGGCCATGCAAGTATAACAACAACGCAGATATATGCTAAAGAAGATATGGAAAAGATAAAAAACGAGTATAACAGGATAGCATAA

Protein sequences of DBSCAN-SWA_4

>CP027241|1579540:1590516|1584857_1585214_+|AVM69056.1|DBSCAN-SWA
MKEIELEEKQREEISYLPFPKGKIPCEAEFDYQGQSFLLVFFYNEAYDFFTADLYRLENMEKKPVKLGEKIVLNQRLFEIETELDRSLPVIVPAAFFEERKAANWESMGNGVELVVIE
>CP027241|1579540:1590516|1581734_1584359_+|AVM69054.1|tail|DBSCAN-SWA
MDVREVSFHIEFTGSFEELAKADKAVDQFKSNMQNLGKTTDNASKDMGKAFETVSKEAKKAGQSTEEAKKEVISLKKDIANFVSSSKITKLGQSVKSNIGTAFEKATGKAKGALESFRTKAGESLSKAASKSRLLTGALNDIKAIGTKAADTVKSKMDALGKTAAQTGEKIGQAFKKAGEVTDKIGSTLTNKVTKPILAAATGAGFLGMQYEQSMAEVRAISGASIEDFGKLNAAARDVSANPLFSANEKASALKYMAMAGWDAQQSIAGLPSILNLATASGEDLGSVSDIVTDAMTAFKMAAEESGRFADVLAKASSVSNTNVALLGDTFKYVAPVAGALGYSVEDTATAVGLMANQGIKASQAGTALRAALAQLADPSEETVKAMEELGISLVDDAGNMKPLSALMVDLRKGFSNLSEAQKAQYASSVFGREAMSGMLAIINSSEADFNKVGSAIRDSGGAAQEMADIMGDTVQGQLKELKNRAVELGLQFFDTFGKDLKNALDSVTKKLKEGMTAFSKLDSQTKKNIGKMIALAAAIGPVVKGLSVVFKVGSFLAPLFGKIAGAAGSGGLGGAAAALGIGLGPLIGIIAGVAAAGYLLYKNWETVKAKGMEFIEAIKAKFSEFGPHIQNLFSNVQVILGVVLPVVEGFFGGVLQMLGKLALDFTDVIGGAIKLLSGFTDFLVGVFTGDWSKAWEGVKSIFIGTWEMISGALRGSINFIIGGINAFLSGLNKIKLPDWIPGAGGKGVNIPLIPTFAQGVTNFSGGMAIVGEEGPELVTLPRGANVFPNRNTEQILGSNMVSFEKMLLEKSRYSNDALESGGTYTTNRNNRSIKFAPVVNIYGAGEGREMAQMAKEELRKLWEEFIDDEDLAG
>CP027241|1579540:1590516|1586604_1587762_+|AVM69060.1|DBSCAN-SWA
MAGITKFGFERKRYADIEKEMFLSAKEKWGEEINLSEKSALGILLRIFAWSIAKIWQLGESIYFQSFLRYAEGIQLDYIAERGGIKRFPKAKSKGKLIIRGNTGKEVYRGFQVRTESGKEYQVTRPGVISENGTVVLPAESLLCGSEQNAEVGEITIVSYPETGITSVTNEEAFVGAREEETDEELRRRYKAGLKNKGKSTIAGIEKRILENPSVKSVIIEENDTETANYGIPAHGIRVIVQGGSDEEIARAILESKAAGISTAGAVAVTIQDNKGKSRVVRFQRTTAIMVYAVIRLSFYLGVENKEQLKEKVQTDVLNYLLGLYAGEDIVVSRLVSLVMGNKEIKDAAVKIGKTEQSLEAKNIVLAEGETVITDKGKVKVSDDL
>CP027241|1579540:1590516|1584369_1584861_+|AVM69055.1|DBSCAN-SWA
MNASKIGEVIFTATTEETVSYENEITERPVEDLGYISDHVRQKPIKFNVSGVLVGEEAFSRLMKLREYSKGKETLQYYGRNVFYNVLIETLETGHNKETRNGFSFHMSCKIVQQAVKKEIIRNQAINAQVKEVTKQGKITVMQKPVTKKKKESIMQKGARQEE
>CP027241|1579540:1590516|1589541_1590516_+|AVM69063.1|DBSCAN-SWA
MIKLSDEIYRAIKKFTNLSRGEFKQLTREVMEKYEIIPKKEQKEYQLLVLLEKFLFSLRTEKKSEKTIDGYRLQITKFSERVNKDIRRISTDDIREYISYLVNTRKNADGTINNYLHILQSFFKWCIVEGYLSQNPIARIKINNFKPKRNRVGLDGEKLEAVKYACEDLREKLIIELYVSTGCRLSEIAEIDVKDINQKERSIEVIGKGNKKRTVFCSEKCKLLIEEYMKKEAITDGALLRSNKKPHGRLKPSAIQSIIKEIGERTNIKLYPHLLRHTFATNSRKHGMSLETIQILLGHASITTTQIYAKEDMEKIKNEYNRIA
>CP027241|1579540:1590516|1585995_1586277_+|AVM69058.1|DBSCAN-SWA
MAGLAKFVNKKIEEKLGAIHTLFLGKVVAVNPLIILPLFGNKTQVEKPMLLGSAVYEVGDIVLLGVLQEYAEGGITRRFDLSDAVVLGKVFNL
>CP027241|1579540:1590516|1588282_1589224_+|AVM69062.1|DBSCAN-SWA
MAQEFYTIITKIGQEKLVSATTGQKLEFYQFAVGDGNGRYYEPMVSQYALVNEKYRANTNATTIEENRITIECLIPAHIGGFTIREIGIFDKQGSLVLVGKYPQTEKPVDSFGGLKDLYIKVQLEVDNPETIAMTVDPNVVIVTKQNLNQELSKYLKKNETVNDLDSSDKDRPLSAAQGKRLNENKLGITEKAADSDKLDGQDCTYFATSQKADSLETQIEQLRADIQNLTQQLNNKADKNMITAIHLPSVTQAWITNAGMIETQVIFGRTEKVMQNIDGIPIYGQNGQTVQVSVGMHALMYSKTDQRFYLIF
>CP027241|1579540:1590516|1587751_1588279_+|AVM69061.1|DBSCAN-SWA
MTFKEIWQRLPQNYRKVSGNMEKLLRVISEQFYFAASMLRSLSSLPSLEKVSGQTLDLLGEEEGTDRNGKSDEEFKQVIRFQIASKDRGEDIHSLNSALDFYLQADFVEIIEGDAKIIVVAGRFLTAEEKRKIKTLAAAGVGVDFKTQHTLYPAKGKTKSICLSGEETKLETRKG
>CP027241|1579540:1590516|1585210_1586008_+|AVM69057.1|DBSCAN-SWA
MIFNRRAQIRLGRLEYESETLDFDFFVPFSTEMEPDISEISLYNLSPQTIAEIKKGMPVELFAGYGEDMGLLCLGEVLNYSTKNENVDRKTTLKVGSGAAAWAEMEINKTYAAGITSQQILQDLLKNYNLTVADITLKHNVKHRKARTLSGKLKNIIQKIAKETETKIYINQERVFVRPTEKGDNKDFYLSGATGLLGSPERCEVSEGETRKEGYKIQCLLNHQITTDRIVVIQSQMAEGSFRVVKGSHNSREYITEMEVLPWQA
>CP027241|1579540:1590516|1581283_1581586_+|AVM69053.1|DBSCAN-SWA
MKIDEAFGFEQKKICVAGKEYTLQNIPLKAVYQMQERAKDKDGNMRPSIFYDEIFDKIILSPKVSWDDFSDVEELEELMTEVYSFLTRNRKRKMEGESEE
>CP027241|1579540:1590516|1586273_1586633_+|AVM69059.1|DBSCAN-SWA
MKDLQVKGNDLVLENGDFKIISGEDEILQSLERILTTRKGEWFLNEEIGLDYSELEKKEVDQELLRLSVIEAVLQEERVQEVLDLIIEWDRAKRALKLSFNLVLKGKGDLYGGHYEVWL
>CP027241|1579540:1590516|1580873_1581272_+|AVM69052.1|DBSCAN-SWA
MTYDVEKVNVVVGGVVLTGYAEGSMVSAERNEDSVLPHVGTKGEVAYAENADRTGKFTVTLAETSPHNIYLNRLATTKNSQVDVAIVSMNDHAVQVTGTNCRVLKPANVEVGREVGEREYEIFAAVMNFEEK
>CP027241|1579540:1590516|1579540_1580860_+|AVM69051.1|DBSCAN-SWA
MKDFTTNIRKVTKAVSRQGFGLILLLDMEHEVPYTICGSMAEVGEVVPVGSKAYQIAGRIFAQKPRPEKLAIAGSTQKEFVAGTKGKYTLTIATEFTDGDIISVNGVKYTCRASGAVAEKNEFNSGTKQVEAQVLKELIEKNETSFSLSTTADTVVFTQKIAAIGEMPFVEVTGSGKANIVKTISGEKDKGMIALLTETAQKHKDFFFLVSTENANEDIRQLSAWIDTQEKMYFVTSQSLLTPKLLASEQTVVMYHDKNNAYVAEGLAAYLATAKIGGVTAKFKTIAGVSEAQISETELEELHKNNGFTYLEKMGILQTSEGKTTSGEYIDIVLGSFWIKVTMDAAMASLAAQTEKINFGNDGIAKMVAVCKSVLNRAAEDQGIIEKDENGKGVFEVNYLPKEKVDGNDIANRRYHHVTWTAKLAGAIHTGIINGTLEY

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVM69051.1|1579540_1580860_+	hypothetical protein	E5DV56	Deep-sea_thermophilic_phage	2.1e-35	38.1
AVM69052.1|1580873_1581272_+	hypothetical protein	A0A2H4J4R5	uncultured_Caudovirales_phage	1.1e-11	36.4
AVM69053.1|1581283_1581586_+	hypothetical protein	NA	NA	NA	NA
AVM69054.1|1581734_1584359_+|tail	phage tail tape measure protein	Q0SPL2	Clostridium_phage	4.8e-76	46.4
AVM69055.1|1584369_1584861_+	hypothetical protein	NA	NA	NA	NA
AVM69056.1|1584857_1585214_+	hypothetical protein	NA	NA	NA	NA
AVM69057.1|1585210_1586008_+	hypothetical protein	I7HPG6	Enterobacteria_phage	2.0e-17	26.5
AVM69058.1|1585995_1586277_+	hypothetical protein	NA	NA	NA	NA
AVM69059.1|1586273_1586633_+	hypothetical protein	E5DV62	Deep-sea_thermophilic_phage	3.5e-14	41.7
AVM69060.1|1586604_1587762_+	hypothetical protein	E5DV64	Deep-sea_thermophilic_phage	1.3e-49	34.2
AVM69061.1|1587751_1588279_+	hypothetical protein	NA	NA	NA	NA
AVM69062.1|1588282_1589224_+	hypothetical protein	A0A0A7RTP0	Clostridium_phage	3.6e-34	41.9
AVM69063.1|1589541_1590516_+	hypothetical protein	A0A1B3B212	Gordonia_phage	3.6e-13	26.7

Sequences of DBSCAN-SWA_5

Nucleotide sequences of DBSCAN-SWA_5

>CP027241|2399613:2408436|DBSCAN-SWA
TTTAGCCGACATTTTCTATACCTCCTAAAATTGGGAGTTGATTATTCTGTACAGTGTAATTATCCGGTACTGAGTTTATTGTAGTATTCGCTACATCCAGCACTCCCTCAACATTGAGGATACGATTTTCAATTTGAGATATCCTCACTATTAAGGTATCATTTTCCCAATTTTTCCTCATTTCTAAAAAATAATCCTGCAAAGCCTTATTAATTAACGCTTTTTTACTGTTCCAGTCATGCCCGTCTTGAAAAGTAATCCTAACTCTAATCTGGAGAGTTACTGTATCTGGTGTAACTACTGTTACAGTATGCCCTATTGGAACAAGTCCGTTTCCTTGCCCTTTTGGATCTGGGTCTAATATATTCTCAACCCTTTCTGTAAGAACGGGGGTAGCCTTGTTGTACTCACTATCAATAATAAGTAATTTAACTGTTCCAGCACCATTCCACACCGATTTTACGATACACCCTCCAACGCCCCCAAGTGCCTTAGTTTTTTCCTTGTAGTCCTGCTTATTCCAGTTGTACGCCTCACTCTTAAATGAGTTATCATACCGTTGTTTTAGGCTTACATCGCTCTCCTCGTCCTCTGCTGGGATAAGTAGCTCCATAAGCTCTCCCTCCAGATCCTTGTGGAAAAAGTCAATAGGATTAAGCTCTCCAAAACTCTTATTACCGATTTCTCCGAATGTTTCACATTTTATTTGGTAGTAGAAAAATTTTTCCTTTTCTTCAATGAATTTTACGACAATGTAGTTGAGTTCATCGTGGCTAAACCTTGAGCCTACAGGGATTTTCATATTGAATTTACCCTTGAGTATCGCCTGTGTAGCCTCAAAAGGAATTATCCCACGCTGTCTACATCCAAGCTCAATAAACTCTCTAATATCCGCTGTAGCCACATAGCCATTTTTAATAGCGCTATCCAGTAAGATATAGATATTAGCGTGCTCCGCCGATGTAGGAGCTACAGCGTTCATTACTAAAGAGCCCTCTCGCTTATCCACATCAGTAGAAACTCTTGCCAGCGTTCTGTCTAATATCGCCTCGTATGTTTGATCCTCATACATTCATTTCCACCTCCTTACTTCCCAAGTCTGTAACAAGTCGAAACTTGATATACAGCGTATCCTTTTCTTGAGTTACATCCAAATCTTCAATTCCTGTTATGTGCTCATTTTCCAATAAGCACTCCTCCATATACCGCCTACACTCGCTCTGTATAAATTCCTCGCTGTAAGAGCCTCCGATGAGCTCATACACTTCATTACCGTACCCCCAGCTATAAATAAGCCAGCGGTATCTTTTTGCCTTAAGAGCTAAGTAAGCCCATACACAGAGAGCATCTACCCCCTCTACTATTTTCCCTGTGAGCCGATTATTCTTAAAATCAATCTCATACTCTCTAATAGAGGAGGCTGTTACCTCTGGCGTAATGAGCTCAAGCTCCGCATCTGTTGCGAATGGGAATAAACTCATATCACACCTCCACCACTCTCGCCAAAATTACAAATTTATTAGTATTCTCCAGCTTTTGTACCGCTACCAGATCCCCCTTTTTAAGTCCGTCTGAAAAAACTATCTGGCTCTGAGTACTTACCTGCGTATCTGGATCCGAATATACCCCCTCCGGGCTTACCGTTCCGAATGGATCGCTTTGAGTGGTATCTACCGTTACTCCAGATACATAAGGCACTTTAATTTTTCTCGTATAGCCTGCCACCAGATGATCCGCTATATATAAATCCTCCGCATTAAGCACCAAATCATCCACTTTTACGCTATTAGCACTCTGCATAATGCCAAGCTGGAGAGTTACTGGATTATCTTTAGCCCCCTGCGATCTCATCATTCCAAGCATTTCAGCAAAATAATGATCGCTTTCCATTCCGCTTTTATCCACTAAGCCAGTATCTCCTTTCTGCTTGCATCTAATATCTTCCACCCGTTAGCTTTACCGTTATGAGATGAGTAGTAAGAGAGAGCCTGTGCGTAAGTCATAAAGCCCTCCATCTCCGTCCTCCAGTATTTATTGACTACCTCAAAAGGCGGATTAGTCTTAGATCCTACAGTAGGTGTATAAGGCTTAGTAGGATCGTTTGCTTTTTCTCCTTTTTTCGTACTCTTAGAGGATTTTTCCTCTTTTTTCTGCTCTTTCGGAGGCTCTTGAGTCTTTTTCTCATCCATTAGAGCCTTAAGCGTTACGGTAAGTGTCATCGTGGCTACCCCGTCCGTCCAAGTATGCACATCACTATCAATCCACACTAACCCCTTAAGCCCTGTGGTACTGTCTTTTACGATAGCCCCTACTCCCGTTACCGCCTCATTGATATTTACACAGGTAAGGGTAAAAGTCTTTTCCACGCCCTTAAACATACTCTTAGCGGTAGTAGTAGGATCTTTTCCCTCCTCTTTCGTGTAAACCTGCTGAAAAATACCATACCTTTTAACCTCCGCATCGTTTTGTACCACGCTTGAAAGATTTCCTTTTCCATCGTATATTTTTACCTTATTTACCATATTGGTAAGTGTTTCCTTGTAGTTGGAGCTAAGGATATTACTATCCTCCGCTATCTCAATCTCGCAAACCACCTTACCAACTTCCTCTACATTGAGTTTCCCCTTTTTAGCGGTTACTCTGTACTTTTTACCGTTCTTTTGAGATGCCTGCGTGTACGCCTGCATTATAATCTCGTAAATGCTTACATTTTGTACTATGAGCTTTTGATTAAGCCCTGTTACTGCAAGCTCTCCTGTCGGGATCTTTACATCCTCGCACACCAGCTTAGCTATCGTTTCTGCCGATTTATCGGAAAAATTGTAGGTAGCCTTGCTTTTAAGTGTATAGAAAAGGAGGTCATACGCTACATAGGTTACTGCCCCTGCTACGCTGTTTGCCTCCCTGTCTACCACAAACCCCCTAAACCGTTCTGTTACCCCATCATCCTCATATAAGTAGATAGGATCGGCTAAGTCGATGATTAAAGGCGTAATATTTTTATCCAGAGGAGCGTTGATTACTTTAATCCCCAGCTTTCTGGCTACCTCTGTTCTGGAGCCTCCCCAGCTAATGGAGCTTACATAATCTGTAATATCCCTGTCTTTGTGTATTACAATCACTCTAGCCGCCTCCTTAAGGGATAGTTAATACCTGCCCTGCAAATATTAGATTAGGATTTTTAATTTTGTCCTTATTGGCGTTCGCTATCTTAGGGTACTGTGATCCATTCCCGTAAAACTTCTTAGCAATCGCCCATAAACAATCCCCTCTCTGTACTGTATATGTCCTTTTTGTAGTTCCTCCCTCCGCTTTTGGTGTAGGAGGTTTTACTGCCCTCGTTGTAGGTTTTACTGTAGAGGTTTTTTTAGCAATTTTTCTTACCTTAACCTTTTTGTACTCCTTAAGATTGAGGGTATAGTATATATCCCCTGTACCGTCTTTCTGCCCCCAAGTGAAACTCTCGATCGTTGCCTCCATATTGAGTAGTCCTGTGATGATTACTCTTATAGGCTTACCAGATCTCCTCCAGTACTCGATCCTGTTCACTAAGAGGATAGGAGCAATCTTAGAGCGGTTAAAACTAAAATTATATGCCTTAGCTGGAAAAAAGGAGCTAAGAGATACCTCCCTCAGCCCCGTATTTCCTATTAGGTTAATATCCCCAACCTTAACCACATTTACTACAGTATTCCTATGAGCTACAGTAACATTAAATTCTGAGGGCTTTACGGGGAGTTGAAACGCTCCCCATCTTCCCTGTTTTAGCCAAAATTCCATACTATAACCCACCTCCTTACTAAGCTATGTTAGGTACCAGCTTACGGAATTTCTTAACCATATCCTCTACCACTTTATCCACATCCGCCTCTTTTTCGATTACTACTGTATCCGCCAGCTTTTCGATATGGATATTATTCCCTGCTTTACTTACTTCCTTTACTTCCTCAGATTGTCCTGCACTTCCTAATCCTCCTGCATCCTTTACATTGAGCTTTTCCACAGGCTGTAACTCGTTGTTGAGTTTTACGCCTCTTGTACTTACGCTCCTATCGTATTGATCTGCTTGATTTCTTGTAAGGACTTTCTCACCCTCGTGGAGTACTGCTGGGTAGTTATCATAAGGTACTCTATCTTTACCGTAGGCAAATCCGAAAAAATCCCCTACAGCTCCGATACCATCGCCTATCCAACCCCCTACGGTACTAATACCATCTCCTACCGCTCCGACTACTCCTCCTACTGCGTTAACCGCATCTCCGATAAGTCCTAAGCCATCTGCTATCGCCCCAAATATAGGCTCTAATACTGCCCATACCGCCTCAACGGTAGCCTGTATAGCTGGGAATACTGCCTCTACCACTTTCCATAAGGCATCAAATACCGCCATAGCTAAGTCAACGATCGGAGAGATGATCTCCCACGATGCACTGAATATCTCAGCCATAATAGAAACCGCATCCTGTACGATCGGAGAAACAGTTTCAAATACCTGCTGGAGTAAATTCATCACAGGTACGATTACTACCTCGATTACCTCTGCCACCTTAGCTCCTACTGCCTCAAATACTGAGGAAATAGTAGGCATTACCGCCTCGATGATACCGGCTACAGTACTGATTACCTGCTCAACAATCGGCATCGCTGTTTGTACCACCGTTGCCAGAGCGTTAATAATCGGCATCACTGCATTAAGAGCGGTAGAGATTACACTCGCTATAATCGGGAACACTGTAGATACAATGTTTCCAAAGATAGCTATGATATTCTGAATTACTGGGAAAAGTGTCTGTATTAAAGTTCCTAAAGTGGTAAGGATAGGCTGTATAGCGGGTACTGCTGTCTTAAAGACTTGAGATAAGCTAAGAATAATCTGCTTAACTACTGGGATTGCACCCTTTACGATGTCGGCAAACCCTTTAACAAAGCCTCCTCCATCTCTAAACGCATCGCCTAAAGCATCCTGTACTACTGGGAATACTTCCTCAAACATTTCTCCTAACATCGCCACTACTGGTGCTATTGTCTTGATTACATTTGTGATAACAGGGATAAGCCCTTTCATCACACTTTTAGTCATTGAGATAGCGGATGTTATCGCTGTACCTAGCCCGTCAAAAGCCGGATCTACAAGCTCCGCAAGTTCAGCGGGTAGCATTGTCTTAAGTCCGTTTTTCAGAGCTGTTACACTTTTACCCCCCAGCTCTTTCATCTTAGGAGCACCCTTTTCAATCGCTACCCCTATCGCTGTCGGTAAGCTCTCAAAGATCCTACCAAGCATCGGAATAGCATTATCGAATAAGAATGTACTCGCACTGTCAATTACTGCCTCCATTGAGGCTGTTATATCTCCACCTAAAGCCAAGTTGCCTAAGAGGTTTTTTACGCTTGCTTTCATCATCGCAAAAGATCCAGAGAATGTAGAGCTCGCCTCTTTCGCTGTAGCTCCAGCTACTCCCAGATTGTCCTGTATTGCGTGAATAGCACTATACACATCGGCTAAGTTACTAATATCGTACTTTACCCCTGTGAGCTTTTGAGCATCCTTGAGGAGCCTATCCATCTCCTCCTTAGTTCCTCCATAACCCAGCTTGAGGTTATCCAGCATTGTATAATTTTGTTTCGCAAACCCTTGATATGCGGTCTGGATACTACTCATATCCGTACCGAATTTATTAGCATTATCCGCCATATCAATAAGAGCCATATCTGCTATCTGAGCTGACTTAGCGGTATCCCCTCCTAAGCTCTGTAAAAGAGACGCACTAAAGCTCGTTACGGTTTCCATATACTCATTAGCGGAGAGCCCTGCGGTCATAAATGCTTTATCTGCATTTGCCATTACCAGCCCTGCATCCGCCTTAAAGAGAGTTTCTACACCGCCTATACTTTGCTCTAAGCTGGCTCCCTGTGTAAGAGCTCCTCCCGCAAGGGCTGTAAGTCCTGCCCCTGCAAGTCCGATCCCGATCGTTATCCCCTTTGCTAAGCTGGATAATATTCCAGAGATTTTAGACAACCCTGCGGTAGCTCCGTCCTTTATTGCCACCGTTGCCTTTGCTGTCATAGAACCTATGCTTTTTAACCCGCCCTTTATGTGGTTAATCATCGCTGTAGCTCCGTCCCTAATGACTACAAACGGTTTAGCTACGGTCTTTCCTACCGTTTTCAGTGTATCCTTAACCCTTCGTAATATCGGGCTCGCTCTGTCTTTAATAGCCACAAAAGGCTTAGATACTGTATTTCCCACAGTTCTAAGCCTTTCCTTGACTTTCATTATTTTTCTGGTAGCTAAGTCTTTTAACTTCACATAAGGATATACCACCGTTTTACCAACGGACTTTAACCCTTTGATGCTGGAGTTAGTCCTATCCACCTGCTCCGAAAACTCCCGCTGTAGCTTGAGGTTTCGTTGTAGAGTGGCAAACATATTGTCTTTAAGGCTCAGCTTAGCACCAAACTCCATCATTTCTGCCACCTCCTTAGATAATAGCTACTGGAGTTACTCCTTTATTTTCCGTCTTTTTAATAAGTTCGTTATGCTCTTCAATCTCTTTTTCAAAAAAGGCTTGAATTACTGTGAGCTCTCCCTTTTGCATACTGTAAAAAACGGACGGGCGTACTCTACCATTTTTCCAGTAGTAGTACATCATCTGAGCCAGCCCGTCCGTTTCGATTAGTTTTTTACAGATTTTACCGCATTATCCCCAAATCCAGAGAGATCAGAGATTACCTTGTAGATGTTAGTCATCTCCCCAGAGAGGAGCAACTTTCTTACCAGCTCTTTCGGAGTAGGTACCTTGAATTTTGCCATCAAGTCCTTATTCTTAAAGAGTGGCTTTCCGTCATCATCCAGAGCACTCTCAAGAACAGCAAGCGTCTGTAAGAGTGAGAGCTCAATGTCTGCATCCTTACCCTTAATAGATACCGCCATATCCTGTACCGCCTCAAATTTATCTGGAGATAAGGCTGAGAGCGTAATCACGAATGGGGATCCATATATCTCACTAAGACGGATTACCTCTACCTTAGTGGTAGGGAGCTTGATTTCTCCTACATCAGAGCCCAGCAAAAGATCCAGAATGTTTACCGCCTGCTTTTGCTCTGCTACCCCCTCTATTGCTACTGCTGCCTCCCTGTCTACCTCAATTTCCTTAACTTCATTTGTGATAATGTTATTTTCCATTGTTATATCCTCCTAATTTTTTTTTCAGAATAAAAAAGACGGAGAGTTTTTACGCTCCCCGTCCTCTACTTAATCTCTTTGTATGCTCGGCTTAGCGGGGAGCGATCTCGTCTAAATACTCATAGTCCGTAAATGTAAACGGAGCCTCAGTTTCCAGAGGTTTCTGAGCCTCCCAGTCAAACAGAGTAAGATCGTCAAACTGTACTCCAGTTACAGCCACTCTCTCCGTACCGTAAGCATCTGGATCCGCTACCTTACTAATGAGGGTAAAGCGAACATCCTTTTTATCCTTTACCATTCCAGAGATCTTTTTAGCCATTCTGGAGTTGACTTTATACATCGTAAGAGATCCCGTACCCTTGCCCCCTACGATCTTGTTATCGGTCATAAAGATACCGCACTGTTTGATCTCCTCTTTGATAAACTCAATCTTTGCCTGTGCCTTACGGCACTCAGCTACATAATCTCCGTCCAGCCAAAGTTCTCCGAATGTACCGTTTAATATTCTTTTGGTTTCTACAGCCATCTGTTATCCCTCCTTTATTCCTTGTTAATGAAAATGTCAACATCTTCAATGGCATCAAGGATACTGATCTTACCTTTGAGGAATACTCTTGAGCCTGTGTTAGCCTCTTTGATAGCCTGCTCATCCATCTCTGAGGTGTCTACCCCGATACTCTCCAGATACAGCTTTTGTTTAGCTACATTGATCTCTACTGTAGAGCTATCTGCCTTGAGATACCCCCTACCTCCCTCTGTTGCCTCTAAGCCCTTGAGGTAGCCTTTAATAGCTGTAATCAGCAAGCACTTATTATCGTAACTGTTAGAATAGTTGCCGATATAGTACCTATTGATCGTGCTGTAGATGTCGGTTTCAATGAGATCTTGAATAGCAAGGATCTTAATCTTCTTAAGATCTTCCGTATCCATTTCCGCTACTGAGGTAAGGGAGTTTACTCCTCTTGCAATAACAATACGCTCTCCATCATTATAGAGAGTGAGATGTCCTGCATCAATAGCGGTATCTACTTCCTCCTCGTCTGCTACTGGTATTCCAGTAACCTCATCCAAAGGCTTGAATGTACTGGATAATCTAAGGTCTAATCCTGCGATCAAGCCTGCGATCCTGCTACAGTACTCGCCCTCAGTAAACTTTTTCTCCCCTACTTCAATCTTATCGCTTGAGGTAGCATTTACTACCTTAAAGCTGATAACGCCTTTTTCGTTAGCCACCGTGTTGGGGAGTACTGCTACAGGTCTTCGGGCTGTCTTTTTCCTCGTGTCCTTAATCCAAGTAGTAAACGCTGTAACATCCTGCGTGGAAATGTCTGGAGCACCACAGAGATAATTTACTTTTACTGTACCAAAGTACTTAAAAGCCTCTTGATAGTTCTCCGCACTTGCCGGCAAGGTATATACAATTACCTTACTCGGAGCCCCTAAGAATACCCTTTCCAGAAAAGCGGTATTGGTTGCATTAAAGGCACTGCTACCAGTCGGAATATCCTCCACCCCTCTAAGCACCATAGCTCCTCTGTTTTTAGCATCCTTGAGGATAATGCCTACAACCCCCAGAGTACCACTCTGAATGGCTACAACGGCTTTCTTTGAAAACTCAATTACAATATCTGGTAAGCCCAT

Protein sequences of DBSCAN-SWA_5

>CP027241|2399613:2408436|2406285_2406795_-|AVM69702.1|DBSCAN-SWA
MENNIITNEVKEIEVDREAAVAIEGVAEQKQAVNILDLLLGSDVGEIKLPTTKVEVIRLSEIYGSPFVITLSALSPDKFEAVQDMAVSIKGKDADIELSLLQTLAVLESALDDDGKPLFKNKDLMAKFKVPTPKELVRKLLLSGEMTNIYKVISDLSGFGDNAVKSVKN
>CP027241|2399613:2408436|2406886_2407321_-|AVM69703.1|portal|DBSCAN-SWA
MAVETKRILNGTFGELWLDGDYVAECRKAQAKIEFIKEEIKQCGIFMTDNKIVGGKGTGSLTMYKVNSRMAKKISGMVKDKKDVRFTLISKVADPDAYGTERVAVTGVQFDDLTLFDWEAQKPLETEAPFTFTDYEYLDEIAPR
>CP027241|2399613:2408436|2402747_2403392_-|AVM69700.1|DBSCAN-SWA
MEFWLKQGRWGAFQLPVKPSEFNVTVAHRNTVVNVVKVGDINLIGNTGLREVSLSSFFPAKAYNFSFNRSKIAPILLVNRIEYWRRSGKPIRVIITGLLNMEATIESFTWGQKDGTGDIYYTLNLKEYKKVKVRKIAKKTSTVKPTTRAVKPPTPKAEGGTTKRTYTVQRGDCLWAIAKKFYGNGSQYPKIANANKDKIKNPNLIFAGQVLTIP
>CP027241|2399613:2408436|2403411_2406078_-|AVM69701.1|DBSCAN-SWA
MMEFGAKLSLKDNMFATLQRNLKLQREFSEQVDRTNSSIKGLKSVGKTVVYPYVKLKDLATRKIMKVKERLRTVGNTVSKPFVAIKDRASPILRRVKDTLKTVGKTVAKPFVVIRDGATAMINHIKGGLKSIGSMTAKATVAIKDGATAGLSKISGILSSLAKGITIGIGLAGAGLTALAGGALTQGASLEQSIGGVETLFKADAGLVMANADKAFMTAGLSANEYMETVTSFSASLLQSLGGDTAKSAQIADMALIDMADNANKFGTDMSSIQTAYQGFAKQNYTMLDNLKLGYGGTKEEMDRLLKDAQKLTGVKYDISNLADVYSAIHAIQDNLGVAGATAKEASSTFSGSFAMMKASVKNLLGNLALGGDITASMEAVIDSASTFLFDNAIPMLGRIFESLPTAIGVAIEKGAPKMKELGGKSVTALKNGLKTMLPAELAELVDPAFDGLGTAITSAISMTKSVMKGLIPVITNVIKTIAPVVAMLGEMFEEVFPVVQDALGDAFRDGGGFVKGFADIVKGAIPVVKQIILSLSQVFKTAVPAIQPILTTLGTLIQTLFPVIQNIIAIFGNIVSTVFPIIASVISTALNAVMPIINALATVVQTAMPIVEQVISTVAGIIEAVMPTISSVFEAVGAKVAEVIEVVIVPVMNLLQQVFETVSPIVQDAVSIMAEIFSASWEIISPIVDLAMAVFDALWKVVEAVFPAIQATVEAVWAVLEPIFGAIADGLGLIGDAVNAVGGVVGAVGDGISTVGGWIGDGIGAVGDFFGFAYGKDRVPYDNYPAVLHEGEKVLTRNQADQYDRSVSTRGVKLNNELQPVEKLNVKDAGGLGSAGQSEEVKEVSKAGNNIHIEKLADTVVIEKEADVDKVVEDMVKKFRKLVPNIA
>CP027241|2399613:2408436|2401094_2401502_-|AVM70528.1|DBSCAN-SWA
MESDHYFAEMLGMMRSQGAKDNPVTLQLGIMQSANSVKVDDLVLNAEDLYIADHLVAGYTRKIKVPYVSGVTVDTTQSDPFGTVSPEGVYSDPDTQVSTQSQIVFSDGLKKGDLVAVQKLENTNKFVILARVVEV
>CP027241|2399613:2408436|2399613_2400684_-|AVM69698.1|tail|DBSCAN-SWA
MYEDQTYEAILDRTLARVSTDVDKREGSLVMNAVAPTSAEHANIYILLDSAIKNGYVATADIREFIELGCRQRGIIPFEATQAILKGKFNMKIPVGSRFSHDELNYIVVKFIEEKEKFFYYQIKCETFGEIGNKSFGELNPIDFFHKDLEGELMELLIPAEDEESDVSLKQRYDNSFKSEAYNWNKQDYKEKTKALGGVGGCIVKSVWNGAGTVKLLIIDSEYNKATPVLTERVENILDPDPKGQGNGLVPIGHTVTVVTPDTVTLQIRVRITFQDGHDWNSKKALINKALQDYFLEMRKNWENDTLIVRISQIENRILNVEGVLDVANTTINSVPDNYTVQNNQLPILGGIENVG
>CP027241|2399613:2408436|2407335_2408436_-|AVM69704.1|tail|DBSCAN-SWA
MGLPDIVIEFSKKAVVAIQSGTLGVVGIILKDAKNRGAMVLRGVEDIPTGSSAFNATNTAFLERVFLGAPSKVIVYTLPASAENYQEAFKYFGTVKVNYLCGAPDISTQDVTAFTTWIKDTRKKTARRPVAVLPNTVANEKGVISFKVVNATSSDKIEVGEKKFTEGEYCSRIAGLIAGLDLRLSSTFKPLDEVTGIPVADEEEVDTAIDAGHLTLYNDGERIVIARGVNSLTSVAEMDTEDLKKIKILAIQDLIETDIYSTINRYYIGNYSNSYDNKCLLITAIKGYLKGLEATEGGRGYLKADSSTVEINVAKQKLYLESIGVDTSEMDEQAIKEANTGSRVFLKGKISILDAIEDVDIFINKE
>CP027241|2399613:2408436|2400676_2401093_-|AVM69699.1|DBSCAN-SWA
MSLFPFATDAELELITPEVTASSIREYEIDFKNNRLTGKIVEGVDALCVWAYLALKAKRYRWLIYSWGYGNEVYELIGGSYSEEFIQSECRRYMEECLLENEHITGIEDLDVTQEKDTLYIKFRLVTDLGSKEVEMNV

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVM69698.1|2399613_2400684_-|tail	phage tail protein	A0A0A8WFK0	Clostridium_phage	2.2e-72	42.7
AVM69699.1|2400676_2401093_-	DUF2634 domain-containing protein	NA	NA	NA	NA
AVM70528.1|2401094_2401502_-	hypothetical protein	NA	NA	NA	NA
AVM69700.1|2402747_2403392_-	hypothetical protein	A0A0A8WJR4	Clostridium_phage	1.8e-40	41.1
AVM69701.1|2403411_2406078_-	hypothetical protein	Q9F4J3	Streptococcus_phage	2.1e-79	63.1
AVM69702.1|2406285_2406795_-	hypothetical protein	A0A0A7RTP2	Clostridium_phage	1.9e-13	34.1
AVM69703.1|2406886_2407321_-|portal	phage portal protein	A0A1V0DZX1	Clostridioides_phage	2.8e-34	49.6
AVM69704.1|2407335_2408436_-|tail	phage tail protein	A0A0A7S0D2	Clostridium_phage	2.7e-57	39.2

Sequences of DBSCAN-SWA_6

Nucleotide sequences of DBSCAN-SWA_6

>CP027241|2412211:2422485|DBSCAN-SWA
ATTAGTTATACGAACGGTAAAAGTCCGCTGTAACTTCCTCAATAAGTTCCTTGTTTTTCAAGTCTTTCATCCAATCTTTTGGAATATCACTAATACCCCCATACAGCCCCGCTAATGAGCCTGTAATCGCTCCTATGGTATCTGTATCCCCTCCTAAGCCAACCGCTCTCGTAATCGCCTCTATAAAGCTCTTAGCTCCGTATAAACTCCACAGGCTCGCCTCTAAGCCATCTACTACAAAGCCCGTACTCTTGATAGAGCTTTCTGGGGCCTTTACTCGTTCCATAAGGCTATCTACTTCCCTCATAGCTAAAAGAATAGATCCCCCGCTCTTAGCATAATACTCCTCTACTGCCTGTACTCCTAAAGTGATAGCTTTTTGATGAGTGATACTACGATTTTCCAGAACACTCATAGCTACCCCTGTGTAGAATACACAAGCCTCTTTGCTGATAGGATGAGCGTGAGTAAGAGCTGAGAATTTTCCTACGGTTTCTACTACATATGAATCTATTACAAAACCTTTCCTCTGCCAGAGATCATAAGCTACTGGGAGCATCCGCATAAGCGATCCGTTACCATTACTATACTCGTAATCTTCTCCGCAACTGTCTATATCTTCCCCCATAAGATAGTTATTTATAGCGTTTGCGGTAATTCCCCCAACATCAAACACTACACCCCCGGCGGTAAACTTCGCATCTTTATACCAAGCTACAAAATTATCCATTACTCTACCAAGTGATGGAATATTCCCACTCATCCCTGCCATAGTAGCAAGTGTTAAGCTGGTATCATCACTCCAAGTACCTTTTTCCTGTCTATGAGTTCCATATCCTACCATATTTCTAAGGTGGGCTCTTTTTACATCTTCCCTACGCTTAAACTCATAAGGTACTCCTACAGCATCTCCGATAGCAAGCCCCATTACACCCGCTAATAAGGTTTCTTTACTTGAGCTTTTCATATTTCTCCTCCTTACAGTTTCTCCAATAACATTATATATCCCTTGTATAATATGTGTCAAGGAAATATTTTTATACACCTATCTTAATCGCAAATCTCTTCAATTTTTAGGCAAAAAAAAATAAGGCTATCAGCACTAAGCCGATAGCCTTTTCTTACCCCTCTCTACGATACTTACAAGGCTCCCCATCTAAAAACACATTATCTGGTTTCGTTTTCGGGTAAGGATATATCTCACAACTACACTTATCAGGAGCACCATTAATAAAAATACATCCTTTACAAGTAACGCCATCTCCGAATGGAGTAAATCTTTCTTGTCCAAGTTCCTTATCTCGCTCTGTTCTCTCGTTCATACTCTTACCTCCTATGCTCCGTATCCCTTAAAATCTCCTCTTTGCTGAAATTTATCATAACCATTCTCCAGTACTACATCCATATCCATAAAGATGGTACCGCCTTTCCTTTCCACTTTTGTAATTCTATAGTAAGCCCCTCTCTGAATAATCATTTCACTCTCATACCCAAAGTTAGCCTGCTTTTTTACTCCATCCCAAGCATTAGGATTTTCTGTAGAATACTCTGCCCCGCTGTAGTAGCTAAAAGGCTCTGCATAAATCATCTTAGTACCTTTCGGAGCATAGATATTACAAATTACATCACCAGAGAAACCTTTACCTTTCGCCACACCTGTACTAATAAAGTTATATTGCCTGCCACCTTTATCTACAAGGTTTTGGAGATCTTTGTCGGTCATACTAAACAGGTTTTTTACATTTAGCATATCCTCTATCGCTTCTGTGCCGCATCCTCTCTGTAGCCATATATCAAAATCATACTCTGATTTATCAATTAGGTTAGTGAGTTTTCTTATCTCATCTCCTGCCCCCTCATAATTGAGGCTAACTTTCTTTTTCCCAATTTTATTGTGCCAAGATCCTGCGTGTCCTGTAAGCGGTCTGTTAAATTTACCGCTACTAGCGGTATAATCCCATCCTGCGTATCTTTGCTCCTTACTTGCCCCTTTCCATACCTTCCCGCACACGCCTCTAAGTACGGTATCAGCATCCTGCGTACTCTTAAACCAATAAGCATTATCCTTACGCTCTTGACTATAAGGATCATCTACCCAGATACCCGCTTTCTTTTGTGCCTGCTCTAACTCTTTTTTGAGTACAGCTACCTTTTTCGCCTGTATCTCGTATTCTTGCCCTTTTTGCTCAAACTCATCTAAGGATGTGAGTAGCCCTTTGAATTTATCATAATCAGCTCCAGTAGAATTTTTTAGCTGATTTTCAAAATAATCTTTTTTAGCTTGTATTTTATCTTTCTTATCAGCATAATCTTTAAGTGTTACGCTATCTTTCCAGATGCCCTCGTATTCTCCAACCCCGTTAGTTCCTCCAGACTTCGCCAGATACGCCAGATTAAATACTGCATCTTCGACTTCTGCCTCTTTGTCCTCCGCCTCTTTTAAGAGTTTTGCTTGTTTGAGCTGTTCATCTTGTTCTATTTTCCATTTCTCGTAATTCTCCGCCCCTCTAATTGAGCCTGTAAGCTCGTTCAGCTCATTATCCCCAAACTCATCAGATACCACAGGGATATATACACATCTACAATTAGGATGGCGTGGGAGAGTAGGCTCTTTCCCTCTGGCAAATAATTTACCGTGATCCGCCTTACAAATAGGGCAAGTCCTATCATCTACCCCGTTTGCACATTGATACTTAAGCTCATTTACGCCCATATCCTTATAAGCATCATCGTGAGCTACATAAGTTACCCGCTTTGTTTCCGTCCTCGCCACTCGCTCCGCATTATACTGAGAGGTATCTATATTCTTACGGATACGCTCTGTAATTTTAGGAATACTCTCCCCTAAAATCATACTCTGAGTAAGTCCTATTCTAAGATTTCTCCCCAGCTTTTCCTTGTCAATCCAGAGCCTATCACTAAACATAGCACCACTCCACGGATAGTCTATGGTTTTCTTTACAAGGGCTGGATTAAGCCTATTAAAATTAGCCTTTACGCTTACGGTCTGCCCAAGTTGATACACCTGCCTCATAAACTGGTCAGTATAAATCTCGCTTAAGCCTTTTGTAAAAGCATCATGCTCTTTCTGCCCCAACTTAGCAATTTCCTCCGCTATCTGCTCAAATAACCCTTTACTGCGGGTAAGGGCACTCTGATTAGCATAGCTCCACTCTCCGCCCGCCTTATTCACGCTGGCTATTGTTTCTGTAACGCTGACTAAGATGTTCCTCTGACACTCGGAATAAATAGAGGCAAGGACTTTTTCCATCCTTGCCTCATCATCAAACGCCTTTAAGTTATTTTTCAGTACTTCCTGCTGTACCTCCGCTATGAGCTTTGATCTCCTTACGCTGTCGGCGTGGAGTATTTTCTTCTGCTCAGCGGTAAGTTGGTTATAAGGAATACCGTACATCGCCTGCACCACTTTATTGATATACCCTTTATACGCCATTTACTCCACCTCCTTATAATTTCGGCTGAGGTATTACCGCCCCTAAAGCCTCCATTCTCCCCGCCTCATTAAGATTAGGGAAAAGATTATTACCGTCCGCCTGCATATTATCTACTGCATACGGATCTGAGGTCTTTTTCTCCTGTTTCGCATCGTTCTCCATCTTTTCTAATATCTCTTTTGGATTATCAATAAAAGGTAACAAGCTAAGGAGCGTTTCCTTATCCACTTTTCCGTCCAATTTAGTAACAGTGTCTACAATTTCCGTTAAGTTATTAGGTACATTTCTTGTAAACTCTACTTTGAGGTTAAGTAAGCTAATATCTTTCCCTGTGGATACCTTAATTGGCACACTAAGCACCCTTACCAGCTCCCTTATCGCCTTTTCCATTTTACGCTCTTTGATAATACACTTTGTTTCAAGTCCAAATAACTTAAAACGAATTGCAATACCACTAAGATTATTTGCAAAATGCTCATCTGAGAGGTTAGGCACCTGTGAAAAGATGTAAATGTTACGCTCAAGCCTATTCAGATGATTTTCCAGAGCATCCGTCTGGATTTGTTTTGTAATAAACTTAACATCTCCGTTTTCCATCACTTCGATTATGCCCTCATCTTTTAGCTTTTCTATACTTTTCTCATTGATAACAGTATTTTTAAGCATAAGATAGGCATTTCTGAACGCCTCAAACTCGTTAGATACATCTGAGAGCACCTTGTCATAATCGGCTACCAGCGTTTCTATCTTCTCCAGATCGCTCATACACTCCTCGTTATTGTAAACCGTTACAATCGGGAGCCTACCGTAAATGTGAGGCTTTTCCTCTACAAATTTATAGTTACAGTACTCTCTACCTACCCCGCCTATATCGTTGGTATCCTTGCTAATAAAAAGCTCCATTTTGGTAGCACTATACACCTCTGCATAATGTACCGTGTTCCCCGTATCCTCCGTATCAATATCATAGAGCCTAATTTTGTACTTAGCCTTTTTGGTCGCACTGTTCTCATATACAATAATGAGATCCTCTGGAGAGATCCTCATAAACTTAGTTTTACTCTCCTCGTCTTGATATACTAAGATATGGGATAAGCCCTTTATCATCGCCTCTTTACCCCACTCGATAAAAAGATCGTCCTTATCGTTTTCTACGCCCAGCTCGTCTAAATAGCTCTGCACTTCTACATCATCTATTTTTTCCAAGTCTACGCCTACATCCACAGGATCTATCTCTACTCCTGCTTTTTTCGGTGTTGGCTCTGTGTAGTTAAGGATAATCGGATTACCTAAAAAATAGCCTACCGTATTATCAATTACCTGCCCAAAGTAGTCATTTACGATCTTGTTATTAGGCTTATTCTTCTTTTTCTGCCTATTAAGAATCTTATGCTTTCCCTCGTATAAATTCTGGAATTTCTTATACTGAGGAGCTATTTTCTTTTGATGAGTTTCTACTAAGCTATTAAGAAAAGATGTACTAAATCTGCTCTCCTCCAGCTCCACATTAAACTCTTTATCTACCATTACTGTTTACCTCCTTTTTTTTTCTCATAAAAAATAGCCCTCAATTTTAAGGACTACTCTATACATAATAATCATCTCTGTTATGCACGATTACCTCAGCGTTAGCATCTGCCATCGCACAAGCAAAATCCAGTCCGTCAAATAAGTCATCGTGCTCTACCTCTGGGAATAGGAGTAAGCACTCCTCCAAATCATCCATCCCCTCTCTAAACCATACTTTACCGTTTTCAAAGTTCGCCGATCGCCTCATCGCTCTGGTTACTTTGTCTTTGCTGGTATTGATATTGATAATAGGGAGGAGAGATAGCCTCCTAAGCTCCTGTGCTAAGGATTTCTGATAAGCTACCGTTTCTACGCCTATACGCTCCACCATCGGGTATTTATCCCTACCATAACTTATTACAGCGTTCAGTTGAGCATTAAAACTTAGCCTCTCTTTAATGTACTCAAGTACATATACATTCCTATCCGCATCTACCCCGACTGCCATAAGCACAAAGTAGTCATTTTTATCCGTTTCCTTTTCCGATATTGCAAGGTCGCAACCAAAGTATACTCTAACAGGTATCCAGTTTTCGATCCCGTCAGCGTTCTTAACTTTAACCTTAGCTTTTTGAAAATCGTAATCTATCTTATATTCTTCATAATACTTAAAGTACTTAGCCTTGAATATCTTACCTTTTGCAAGCTCTGTATCGTTCTGATACTGCATATTAAAGATAATTTTTCCACTCTCCGCCATTATGTCCTTAAGTTTCTGTACGCTCCACTTTTCCTCCCAGAGTGATACCTCTTTCCCGTCCTTAATTGAGAGGGCTTTTTGAACATTTACCACATACTTTTTACTCTTGATTAAGTCCTCATACAGATCCAGAGGATTATAACGGGTACCAAGTATATGGATCTCTCCATCTGGCTCTAAGGTAGGGAATAGAGAGGAGTAAAACCACTCTTTTAGATTAACCCTCTGCCTCTCCGTTCTGGCATTCTCTAAGCCTACAAGGTCATCACCAATAATAATATCAAAGTGCTTGGAAATAACCGCTCCTGAAGCTCCCAGAGCTGTTACAGTAGCCTCCTTTTTAATTACCGTCCTTTTATTTACGGTAAATTCTCTATCATTCCAAACATTATCCTTACTCTTTTTCCAATCCCCAAAGATGCGGATAAGGTCAGTATTCTGCTCAAAGTGGGTACGGACTTCCTTTAGAAACGCCTCCGCCTGTGTTTGTGTCTTACTACCTATCATAATCCTTATATTAGGATCCCTTAAAATCTTAGTGATACAATAATCCACATCGCCTACGGTACTCTTACCAAATCCTCTCGGAGCTAAGTCCAGAGTGCTCTTATGAGATGAGATATTAGAAATAATGCTTTTATGCAAATCCTGTACGCTCCTTTTAGTAACATACTTACATACTAAATAGTACGCTACCTCAAAGCCTGCGTATTGAATTAAATGCTTTATCATAGCATCTCGATTATCTGCCTCGTTCAGCATTTCCTCTACTACCGCTACTTTTTCATAATCCAACACACCCGCTTAACCTCCTTTCCGCCAAATTAAAAGGGAGCCTCTTAAGCTCCCCCTCACATTACTACCAGTTTTACTATTAAGAATACCGCCATAGTGAACATCATTAAAATATTCCACGCCAGTACCGACTTTTTCGGATCAAACTTTTCCAGCTCTGTAAAATAAGCAAAAGTCTTACCTATCAATACTACTAAAACTCCTAACAATAAGATTGCCAGTAGTTTAGTAGCCATTACCATTAAATTAGCCATCACATCCCGCCTCCTTAAATGCTTTATGGAGTTTAGGCTCCTGTATCGCTATCCAGTCTACCATCTCCTCATTTAGTGCCCAGTGAGTACTGTTTTCACTACTTCCCCAGAGCCCGCTCTCATATAAAAAGGCGTGGATAATCTCGTGCCTCAATACTTCTTTTTGATAAGCTACCAAATCCTTTACGCTCTGGATGTCCTGCTTAAAATTATAGATTAAAAGCTCTTTAGCGTGAGGATCGCACCATCCATCCGCCCCGTTTCCTTTTCTATAATCTTCCTCCTCAACTATGAGGATTTTATAAATAGTGCCCAGAATGTTTACCGTCTTACCGCTTTCTCTCTGTGGCTGGTTACTTCCTGTTTCTGATAAATCTCCTATCTCCGCAATTACCTTTAACCCGCTTTCCGTGAGCCTCAGCGTTACTCTGTCCATATCGTCTATGGCTAATACCTCTCCCAATAGGTTAATTCTCTTTATATTTACGATTTCTCCTATATGCACCGCTTTATTTCCTCCTTTTTCTGGTGTTAGTAGCGATAAGGAGTACTGAAACTCCCAGTACTCCTACCACAAACCCTATCATTATGCCTATTCCTACGCCGATGATAAAGCCCATTAGATTACCTCCATAGGCTCCAGATCGTCAAATACTACTGGTATCATACCTTTTAACTCTTTGAGGAGTGGTACTGCTACCTCTAACATCTGTGGATGAGGTTTCCCTGTTTCTCCGCAAGCTCTAAGGCTGAAAAAGTGCCTCCACTCTCTTAAGTTAGCTGTCATTACTACCTCAGTTTTAAGGCTATTAGGTAGTACCGCTCTTGCCTCTTGCGGAGATGCTCCATAACTAAGTAGCTCAAGGTACCTATTCTCTGCCTTAGCCACGCCCTCTACCCATATATCGTGTAGAGAGTTCCTTACCATATCGTTAGGAACATAATCCCAGTAGCGAGGCTCAATTACCGTAATTTCCCCGCCCTTATTTCCATAGTTACAGTATCTTGTACTCTCTTGAGCAAAGGATGCTACTCTATGCCTTACGATCTCGTGAGATATTCCCCTATCTACGATAAACTTAACGGAAAAGCTAAAATGCTCCAGCATCGCAAGGTGTTTACTCTTTATAAGGGCTCTTATAATTTTCTCCGCTGAGCCCTCTGCGATTTTATCCTCGCTTTTGTAGCATACTCTCGCTACCTTTTCTATCTTCCTAAGAATTTCCTCCCCGCTGAGCTCATCTAAGATCTCATAACCTGCCTTAATTATCTTCATCCCTCATACCTGCCCTTTTTTTAAGTGATTTACGGATACGGTCGGCAATATTAGAGACTACCTCATCAATGCACTTAGTAGGAATATATCCACCCTCTACAGAGATTTTTATCTCTACTGGCTCAGAGTGTTTAGATGGCTTAAACATATCTCCAAAGATATTGTCCGTCGCCTCTCTAAACTGTTTATAATCCTTATCTTCCTCCTCGTTTGACTCTCTATGGCATCCGCACTCTCCACAGCCACAGCAATTATCCTCATAAAAGTCTTTTGCTGGCTCTGGAGCCTTTTCCTGCTCGCCCTCGATTGCCTCAATCTCAAACTGGATATACTCAATAGCTTTCTTAAGATCAACTACCACATTATCCTTACGCCCTGCTCTGGAGATATACTTAACCGCATTTCCCAGATTAAAGTTAAGATCCCAGTCCTTAATTACCTTATAAGGCTCGTACTTTCTTCCCTCCGCATAATGTGAGGGATGTTTAATTTTTTCCATCATTTTCTCCTCCTATCCAATAATTTCTACTTTCCCATCGCCTCGCTCTATCTTGTAGTAGGCGTTACCGCTTGAGTAGTCCACCACTACTACAACCTCAGCATTAGGATCCATTGTTTTTAATTCTTCCATCAATTCCTGTACGGTCATATCCAAACAACCTCCTCTCTGTGATAACTAACATAATCACTAAAAGATAAATTATTTAGATAATGTCAGTACCGTTTGCCTATTTCCCCGTGTTTTTTCTCCATTTCTCCTCAAAAGTTACTGTTAAACTTACATTATTGAGGTATAAACTACTTAAATCCCTCTAAAAGTGTAGCTATCTCGTCTAACCTCGCCTTATCGGCTGGAGATAATTCCACATCTTTACCGCCCGCTATCTCGGCACGATCGGTAGGCTCTCCCATTAAAAGTAAATCCAGTTTTACTAATCGCTCAAAATCCTGTATATTCCTTACTTTTATCTCGCCTTTCATTACCCTTTTAGAGAGGTCTGCCATAAAATTATTGATAATAACTCTATATCTCGCCCTAACATCTGTAAGCTGAGTATTAAGAGCCTCCTCCCGTTTATTCTGAGAGTTTTCAATGTTTCGCTGTGTTACTCGTGCTACCCAGTTAAACGCTCTGCTCCAGCCTGCTACCGTTCGCTCCGTTCTGCCTATGGTTTCTGCCACAGCTCTAAGGGAACGCTTATCTCCTAAGCCATAATACATCTCAAACGCCCTGCTCTGGAGCTCGTTCTCTTTTGTTAGCTTGTCCGCCACCATTTCTACCTCCTTTCCCTTGATTTTCCGCCCTTTTCCCTCTATCTCTGTATTTTGCGGTATTTTCTACAGTTTTTCTTACTTACCGTACTCCTGTTATGATAAATACCTTTATTTTGAGGAGTATTTTTACTATTTACCTCTATACAATATTTTCCTTAAGGAATTAGAAACTATAATTATCTTTTCAGTACTCTTTTTCATTAGGTATCTTTACTATTTCTTTGTTTATTAGATAGAGTATTATTCTATCTTTTTGCCCGTTTTTCTCTTTTCCGCCGTTTCATTGTTTTTTCATTGTAATGAAATAAATAAAAAAGAGGCTCTATTTCCCGCCCCTTTTCGTTTTTTTTTATTTTATTAGAGCCCTCTCTTTAGTAGCCACGATATAAAGCCCTCCTCTGGAGTAAGCTCTACATACTCGTTATATCTATTGCTAAGGAGTATGAGGTCATCCTCTGTTATTCTTACGCTATTACTTCCAAATCTTAGCATAGGTAGAGTAGTCTTTTCCTCTTTCGGCGTTTTTTCCTTTTCTTCCTCAATTTCTTTCTCCTCAAAGATACCTTGTAGGTCTATCTCCGTAAAGCCCATTACTTCTAAAGGAAAGTCTACCGCTTGTAGTTCAAATAACTCAGCCTTTAAGAGATCCTCATCCCAGTTAGAGAGTTCTGCCAGCTTGTTATCTGCTATCCTATATGCCTTTATCTGCTCTGGCGTCAGATCTTTTAATATAATATAAGGAACGCTCTCCATCCCCGCCAGTATGCTCGCCTCTCTCCTTGTATGCCCTGCTATGATTACCATATCCTCATCTACAAGGATAGGATTTCTAAAGCCAAACTCCTTAATGCTCTCCAACACCTTTTTTACCGCATAATCATTTATTCTCGGATTTTTCTCATACGGTATTAGGTCTATCGGATCCCCATATAATATCTCCATACTCTCCAT

Protein sequences of DBSCAN-SWA_6

>CP027241|2412211:2422485|2420245_2420758_-|AVM70529.1|DBSCAN-SWA
MEKIKHPSHYAEGRKYEPYKVIKDWDLNFNLGNAVKYISRAGRKDNVVVDLKKAIEYIQFEIEAIEGEQEKAPEPAKDFYEDNCCGCGECGCHRESNEEEDKDYKQFREATDNIFGDMFKPSKHSEPVEIKISVEGGYIPTKCIDEVVSNIADRIRKSLKKRAGMRDEDN
>CP027241|2412211:2422485|2415677_2417192_-|AVM69715.1|portal|DBSCAN-SWA
MVDKEFNVELEESRFSTSFLNSLVETHQKKIAPQYKKFQNLYEGKHKILNRQKKKNKPNNKIVNDYFGQVIDNTVGYFLGNPIILNYTEPTPKKAGVEIDPVDVGVDLEKIDDVEVQSYLDELGVENDKDDLFIEWGKEAMIKGLSHILVYQDEESKTKFMRISPEDLIIVYENSATKKAKYKIRLYDIDTEDTGNTVHYAEVYSATKMELFISKDTNDIGGVGREYCNYKFVEEKPHIYGRLPIVTVYNNEECMSDLEKIETLVADYDKVLSDVSNEFEAFRNAYLMLKNTVINEKSIEKLKDEGIIEVMENGDVKFITKQIQTDALENHLNRLERNIYIFSQVPNLSDEHFANNLSGIAIRFKLFGLETKCIIKERKMEKAIRELVRVLSVPIKVSTGKDISLLNLKVEFTRNVPNNLTEIVDTVTKLDGKVDKETLLSLLPFIDNPKEILEKMENDAKQEKKTSDPYAVDNMQADGNNLFPNLNEAGRMEALGAVIPQPKL
>CP027241|2412211:2422485|2421891_2422485_-|AVM69720.1|DBSCAN-SWA
MESMEILYGDPIDLIPYEKNPRINDYAVKKVLESIKEFGFRNPILVDEDMVIIAGHTRREASILAGMESVPYIILKDLTPEQIKAYRIADNKLAELSNWDEDLLKAELFELQAVDFPLEVMGFTEIDLQGIFEEKEIEEEKEKTPKEEKTTLPMLRFGSNSVRITEDDLILLSNRYNEYVELTPEEGFISWLLKRGL
>CP027241|2412211:2422485|2419602_2420259_-|AVM69719.1|DBSCAN-SWA
MKIIKAGYEILDELSGEEILRKIEKVARVCYKSEDKIAEGSAEKIIRALIKSKHLAMLEHFSFSVKFIVDRGISHEIVRHRVASFAQESTRYCNYGNKGGEITVIEPRYWDYVPNDMVRNSLHDIWVEGVAKAENRYLELLSYGASPQEARAVLPNSLKTEVVMTANLREWRHFFSLRACGETGKPHPQMLEVAVPLLKELKGMIPVVFDDLEPMEVI
>CP027241|2412211:2422485|2418975_2419488_-|AVM69718.1|DBSCAN-SWA
MHIGEIVNIKRINLLGEVLAIDDMDRVTLRLTESGLKVIAEIGDLSETGSNQPQRESGKTVNILGTIYKILIVEEEDYRKGNGADGWCDPHAKELLIYNFKQDIQSVKDLVAYQKEVLRHEIIHAFLYESGLWGSSENSTHWALNEEMVDWIAIQEPKLHKAFKEAGCDG
>CP027241|2412211:2422485|2417250_2418732_-|AVM69716.1|DBSCAN-SWA
MLDYEKVAVVEEMLNEADNRDAMIKHLIQYAGFEVAYYLVCKYVTKRSVQDLHKSIISNISSHKSTLDLAPRGFGKSTVGDVDYCITKILRDPNIRIMIGSKTQTQAEAFLKEVRTHFEQNTDLIRIFGDWKKSKDNVWNDREFTVNKRTVIKKEATVTALGASGAVISKHFDIIIGDDLVGLENARTERQRVNLKEWFYSSLFPTLEPDGEIHILGTRYNPLDLYEDLIKSKKYVVNVQKALSIKDGKEVSLWEEKWSVQKLKDIMAESGKIIFNMQYQNDTELAKGKIFKAKYFKYYEEYKIDYDFQKAKVKVKNADGIENWIPVRVYFGCDLAISEKETDKNDYFVLMAVGVDADRNVYVLEYIKERLSFNAQLNAVISYGRDKYPMVERIGVETVAYQKSLAQELRRLSLLPIININTSKDKVTRAMRRSANFENGKVWFREGMDDLEECLLLFPEVEHDDLFDGLDFACAMADANAEVIVHNRDDYYV
>CP027241|2412211:2422485|2421057_2421531_-|AVM70530.1|DBSCAN-SWA
MADKLTKENELQSRAFEMYYGLGDKRSLRAVAETIGRTERTVAGWSRAFNWVARVTQRNIENSQNKREEALNTQLTDVRARYRVIINNFMADLSKRVMKGEIKVRNIQDFERLVKLDLLLMGEPTDRAEIAGGKDVELSPADKARLDEIATLLEGFK
>CP027241|2412211:2422485|2412211_2413177_-|AVM69712.1|DBSCAN-SWA
MKSSSKETLLAGVMGLAIGDAVGVPYEFKRREDVKRAHLRNMVGYGTHRQEKGTWSDDTSLTLATMAGMSGNIPSLGRVMDNFVAWYKDAKFTAGGVVFDVGGITANAINNYLMGEDIDSCGEDYEYSNGNGSLMRMLPVAYDLWQRKGFVIDSYVVETVGKFSALTHAHPISKEACVFYTGVAMSVLENRSITHQKAITLGVQAVEEYYAKSGGSILLAMREVDSLMERVKAPESSIKSTGFVVDGLEASLWSLYGAKSFIEAITRAVGLGGDTDTIGAITGSLAGLYGGISDIPKDWMKDLKNKELIEEVTADFYRSYN
>CP027241|2412211:2422485|2413331_2413532_-|AVM69713.1|DBSCAN-SWA
MNERTERDKELGQERFTPFGDGVTCKGCIFINGAPDKCSCEIYPYPKTKPDNVFLDGEPCKYRREG
>CP027241|2412211:2422485|2413543_2415664_-|AVM69714.1|DBSCAN-SWA
MAYKGYINKVVQAMYGIPYNQLTAEQKKILHADSVRRSKLIAEVQQEVLKNNLKAFDDEARMEKVLASIYSECQRNILVSVTETIASVNKAGGEWSYANQSALTRSKGLFEQIAEEIAKLGQKEHDAFTKGLSEIYTDQFMRQVYQLGQTVSVKANFNRLNPALVKKTIDYPWSGAMFSDRLWIDKEKLGRNLRIGLTQSMILGESIPKITERIRKNIDTSQYNAERVARTETKRVTYVAHDDAYKDMGVNELKYQCANGVDDRTCPICKADHGKLFARGKEPTLPRHPNCRCVYIPVVSDEFGDNELNELTGSIRGAENYEKWKIEQDEQLKQAKLLKEAEDKEAEVEDAVFNLAYLAKSGGTNGVGEYEGIWKDSVTLKDYADKKDKIQAKKDYFENQLKNSTGADYDKFKGLLTSLDEFEQKGQEYEIQAKKVAVLKKELEQAQKKAGIWVDDPYSQERKDNAYWFKSTQDADTVLRGVCGKVWKGASKEQRYAGWDYTASSGKFNRPLTGHAGSWHNKIGKKKVSLNYEGAGDEIRKLTNLIDKSEYDFDIWLQRGCGTEAIEDMLNVKNLFSMTDKDLQNLVDKGGRQYNFISTGVAKGKGFSGDVICNIYAPKGTKMIYAEPFSYYSGAEYSTENPNAWDGVKKQANFGYESEMIIQRGAYYRITKVERKGGTIFMDMDVVLENGYDKFQQRGDFKGYGA
>CP027241|2412211:2422485|2418785_2418983_-|AVM69717.1|DBSCAN-SWA
MANLMVMATKLLAILLLGVLVVLIGKTFAYFTELEKFDPKKSVLAWNILMMFTMAVFLIVKLVVM

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVM69712.1|2412211_2413177_-	ADP-ribosylglycohydrolase	A0A1S6UB21	Serratia_phage	2.9e-31	28.9
AVM69713.1|2413331_2413532_-	hypothetical protein	NA	NA	NA	NA
AVM69714.1|2413543_2415664_-	hypothetical protein	H7BWE7	unidentified_phage	1.2e-21	31.0
AVM69715.1|2415677_2417192_-|portal	phage portal protein	A0A0S2MVB2	Bacillus_phage	2.3e-51	32.3
AVM69716.1|2417250_2418732_-	hypothetical protein	A0A1B0XU48	Freshwater_phage	5.9e-15	32.1
AVM69717.1|2418785_2418983_-	hypothetical protein	NA	NA	NA	NA
AVM69718.1|2418975_2419488_-	hypothetical protein	A0A1J1J9Q7	Escherichia_phage	4.5e-15	46.2
AVM69719.1|2419602_2420259_-	thymidylate synthase (FAD)	A0A2K9V392	Faecalibacterium_phage	1.5e-50	52.8
AVM70529.1|2420245_2420758_-	hypothetical protein	F4YCQ0	Synechococcus_phage	6.1e-12	42.6
AVM70530.1|2421057_2421531_-	hypothetical protein	A0A218KCF1	Bacillus_phage	2.4e-10	28.0
AVM69720.1|2421891_2422485_-	DNA methyltransferase	A0A067ZI74	Vibrio_phage	6.0e-27	45.7

Sequences of DBSCAN-SWA_7

Nucleotide sequences of DBSCAN-SWA_7

>CP027241|2425656:2435554|DBSCAN-SWA
TCTAATCGTTGATTGTATTCTCCTCTTGCAATCTCTTAAGTGTTTTAAGGTAATACTCCAGCCCGTTAATTACTGTGGATAACTCATTCGGAAAAGCTCCAGATAAAGCATCCTTAAGCTTGTTTACCACCATTTCCTTATCACTTTTCCAATATCCTAAAATATCTTTATCTTGTAGTACCCTCTTTACCGCTTTCCACAATTCAAGCTCATTCTCGCTATGTTCCACCTCATACAATCTCTTATGAGCCTGTTGTAAATCCATAGCCATCTTAGTACCTAACCTATCTCCTATATACTTCCTGTTTATCTTATCCTCAAGATAATCCTTACAATACTCCTTACGATCGTTATAAAATGGGAGCCTATCCTCCTCCAACCTACTAAAGATAATATACTCATAAACTCCGACAGGTTTATCAATCAGCCTATACTGTGCCTTTTTAACTGTCCTAAGAGCCTCTGTATCTGCATTATAGTATATGAGCCCTACATTATCTGGGAGTTCATCTTTAGTTACTAACCCTGTGGGCACTACAAAATAAAATTCATTACAATACTGTAAATATAAATGCCACTTATTATCCTGTTTAAAATCATTCCTACTAATCTTGATCTCATAGCCTATAATATTAGGCTTAGTGTAACTCTTTGTTATCGCCAACCCGTCAAACTTAAGTAACCCCTGTGGATCTGGAAAATATGTAGAACAAGTCTTACACTCTGTAAGGAAATAGGTAGACTTAGTGCTATGTAGCTTACTTAATGCTATTTTTATATCCGTTGAGGTTACTCTCTTATCCGCCATCGTACCGCCTCCTCTCTGTTTTGATACTTAACTTAATCATAAAAGAGCGGAATTTTTAGACAAAAAAAAGAGGATCCTTTTGAGATCCCATTACTTTTATCACACCTATTTTATTTCAGGACTATTTAACTCCTCATCCACTAACTGTTCCACAATCTTATAACCTACTGCCTCAGCGTCTTTCTTTGTAGGCTCAAAAGAATACTCACTCTTTATCTCATTCAAATTTTCGTTAAATATTTGCACTAAATAGCACTTAGTTACTTTAACTTTATATTTATTTATTGCGTCCCATCTCTCCTCTAAAATTTTATTTTTCTCTTTAGCCTCTCTTTTAATTTTTTCTACCATCTCTTGAGTGGACTTTTCCAATTCTTCTGTTTCTTTCTTCCATTCATCCCAAAAGGCTCCTAAACTTTCCTCAGATTTTTTCATATTACACCTCACTTAAATTACAATATTATATACCTCCTATATTGTAACTCAATTATGAGGAAAATTCAATCCTCTGTTAGAAACTTTACCCACGCCCTCGCATCATCCTCTCCGTAAAGGCTGTAATAACATCTCGTGTAAGGTACATCGGCTATCTCCAGATTTCCCTCTGTAGTAAGCCCTCTCCTCTCGTACCGCCTCTCTATGTTCTGAAGATGGTGCCTAAACTGGTGTAGAAAAGCCTTAAGCTCTGGCTCTGTTAAGTATATCTCCTGTGTAACTGGTACATAGTTATCATCTCTTACCCAGCAAGTGATTACAGGGAGAGGTACCATATAAGCATCTGCTAAGTCTGTATTGAGCTTTCTTATTGCCTCCAGAGCTTGTATCTTGTCTATCGGCTGTATAAAGGAGTTTACGATAGGGAATGCTTTACACCCCCTAAGTATCTTCCTGTAAAGCTCTACCCTGTTAGGAATAGAGATTACCTCGTTTCCCATTAAACCGTCCTCCAGTTCCCCATCATATCGTGCCTAATATCGTATGCCCCTACAATGTCCTTAATTAAGCAACTCTCCTCATAAGTAGCGTAAACAATACCCTGTATTACATATCTATCAAACGCCTCTAACGCCCGCTCTACTCTGGTTACCTCTTTCTGAGCATCCTCACTATAATCCTCATCATAAAGCCTGTTCATCGCCCTGTCGTGAGCATTATAGATTTTATGCTGATTTTTCTCCCAGCCACAAACTGGGTAGAGCTTTCTTCCTTGCTTATCCTTGTAAAGTTTCATATCCTATACCTCCTTTATATATCCTGTATGAGTAGGAGCTTTATGCTCCCAACTCCTTTACATACTCGATGCCGTCAAAGTTGGTAAACCCTCCCCCATTGAGGATAGCCTGTAACGCCAGCTTTCCTCCCTGCGGAATATATGGAACGATGATACCGTATCTGTCAACAGAGTTACTAAATGCTAAGTAACCTTTTCCCTCTACATAGAACGCCCAGCCCGTAACTATTATAGCAATCCTCTTAGTTCCAAACTTAGCATTTTTCAATCTTCTAATTTCCATTATCCTTTACCTCCTTGATTTCCTGTTTCACTGCACTTATTATATACCCCCTATATAATAATGTCAAGTACTTTTTATATATCCCCTGTATAAATTTTTAAGGGAGGGCTATTTACACCCTCCCCCATATTACACAGTAGCCTCATATACCCGTTTTCTAAGGTGTTCCAGCTCTTTCTTTTCTGAGGCAAAAAACTCCTGCACTCCCGCTCTGCCCTGCAACTTTTTCTCTTTTCCATCCTTAAGGGTAAGGGTAAACCACGCCCCGCTCTGCTGGATAATGGATAACACGATGCCCATATCAATAGTATCCTTTATCTCATCTACCCCCATAAAATAATTAAGAGTGTATGTTCCAAGCCTACGATCGTTTTTAGTAACCTTATTTTTTTCCATCTTCACGCTGATTAAGTTCCCGCTCGGCGTTCCATAGTTACTACTTGTTTCGTTGCCCTTTTCGTCCAGTAGTGAACCTTTTGTAAACCAAAGAATCTGGCTACAAGCGTGAGCTAAGGCTGTTCCGCAAGGTATCTTATAAGGCTTGTAAGGATTTCCGATATTCTCTCTGAGCTGATTAAGGGCTAAAAAGGTACAGGAGTTCTTATGTAGTAACGGTACTACTTTATCGCAAAAGCTCTTAATAAGAGCACTGTTTCCTCCGTAACTTTTCTCATCAAGTCCTTTCTCCTGTACCGCCTTTGGAACGATAAACGGTACGCTGTCTAAGACTACAAGCCCTGCCTTTCCGCTCTTGATATAATCTAAGAGCATATCAAGTAACTGCTCTCCGTACTCCGCCTCTGGCTGTATTAGGATAACTCTGCCCCAGTCTACGCCGATTATCTCGCCCCACTCTTTCTCCAGAGTATTCTCTGCATCCAGATATACCGTGTACCTCGTCTTATCCTTTTTCTGATAGTTAGAGATAATATCTAAAGCTGTGGTAGTCTTTCCGCTCTGAGGGAGCCCTACAAGCTGTACCATACGCCCTACTGGTATGCCTCCCCTTGTTAAGTAGTTCATCTGAGGAGAGGTGTAAGGGATAAACTCGCTTATCTTAAGATCGCTGGCTTTTCGGATTATATCCGTCTTGTACTTCTTATTTACCTCTGCTATGAGGTTATCTATCTCCGCCATCCTCTACCGCCTCTCTGAGTACTTTTACATCAAGCACCTTGAGCATATCCTCATTTGATACGCCATTTTTAAGCCCATTGACAAGGAGCTCTGTTTTAGCCTTTCCCAGCATAAAATCTAATAACTCTCTTTTTGTAACCTCTACACGATCCTCTGGATTAAAAGCATCCATAATACCCATTACACATCTCCCTCCTCTCTGTTATTAGCTCTGGCTACATCAAACCCCTGCGGGTATCTGGCTCTCAATTTTTCAATGTTCATCTGGAGGATCTCGTCAAGGTCAAACCCCATAGAGTGGCAAATCATAGCCATATACCACATCACATCCCCCAGCTCTTTCTTAAGATGTTCTACATCAAGCTCTTTTTCGTGGAATACCCACTTTTTAATCATATCCAGAGTTTCTCCCGCCTCTCCAGATAAACCTAAGCATCCGTTAAGCACTCCTCCTACATCATACTTCTCAGAGTTGAGTTTATTGATAATACGCTTGTTAGCTCTGCCATCGTTCGTAACCATAGCCATCTTTACATAATCTTTTCCTATCATTTTAATACTCTCCCCCTTTCCGGCTTTCATCCTTTCCAGCGGTTTCTACGAACTGTGTTTCCTTGGTCTCCAGAGCCTTTTTAAGCTCATAATTTTCTGCCTTAAGTGCCTCTACCTGCGTTTTAAGAGCCTTGATTTCGCCTTCACGCTCGTACTTATCCTTATTAGCATCGTTAATATCTTTTTCCTTAGTAGCAACTCCACTAACAAGGCTCCTGTACTCACCCAGAGTGATCTCTACCATAATCTCTCCCTGTGCCTTAAAGTCCTCTTTCTTAAACCCGTACCCGTCCATTTTCTTATCAAGGATTACATCTTTTACTGTTACATTTTCCATCTTAATTTTCCTCCATTTCTTTTACTATTTCCGCTGTAGTAGTCCACAGCTCTACTTCTTTATCAGTTATCCCTAAAGTGTAATCTACCGTTATAGGATTTCTAACCACTGCTATATCTACACCCCGCTCGTTAGGAATAAACAATACTACCCCATCATTACAGATAAAAACTGTTTCCCCCGTTATCTCTACCCCTTGAGCCTTGAGATGGTCTAAAAAGGCGGTTATTTTCTCCTCGATCACTTTTCGCTCCTAATCCTTTCGCAAACAATTCTCCCAGTAGTATCACTTAATCTGCAATTCCACCCCTCCTGCCTCATCTCCTCGATAAATGTTGAAATATCGCCTATAAACCCCACATTAAAACTTCCTAATGTCTGAGCCATATCTAAAATCTCCTCATCGACTTCCTTATAATTTTTCATCTATACATCTCCTTCAATTTTCCATCTCTCGTGAACATTCCCGATTACCTTTAACCCTGTAACCCAAGCAAGTAAACTACTATACTTCCCGTCAATTACTACTTGAAAACAGTCTTTTTTACGCTCTACCTCTGCCCTAAAGATTTCATCTTTTAGAGTAAGTTCTAAAATATCTCCTTCATATATCTCCGTCCCGTCTACGTCCTTAATGCCCGTGTATTGCATCAAGACAAACCTTTCCCCTGTATCATCTCTTTTCCATACGCCTGTATGTTTAACAAAAAACAACAACATATCATCACAAATTTGATAATTCGTCCATCTTTTACACTCCTGATCCCAAGCTCTAAACTTGATTTTTTGATATTCTTTCATCACGCCCTCTTATAAAAGCTCGTCCAAACTTTTAATATCTGCCTCTTCACAATTCCCCTTATACAGTTTAAAGTTAGTGTTATAATTTAAACATCCCATAAATAACGCATTCTTTTTCTTTCGATAAGTAGCAAGCAACTCCTCAAATCTATCAAAATACAAAATCTCTCTATTAACTTCCTTTTCTTCAAAATTTACAGTATATAAGTGAAAATCCCACTCTAAAACCCATACAACCTTAGTCATATACACTCTCCTATAAGAAATGTTTACAGTAAAACTCGTTTTCGTCCTTGATCTCCATCCCTTCAAGCTCTGTACCTATATGATTATAAAGGAGAGTACTTACTGTATCATCTACCTTCTCTACCATATCTGTAATACCATCCTCAAAATCTGTATTTATCGCCTTTAGTATCTCCTGCTGGCGTTTCTTTGAAATATTAAACTCGTTGAGAACGCCTTTAAGTCTGTAAAACTCTGGAGGGCTGATACTTTCCTGTATTGCCTCGCTCAGTTTTCCGTCCTCTACAATGCCTGTAATTATTCCCTCAACAGGATTTTCAAAGATGTCTGAGGCTTTCTGGCACTCTCCATTACGATAATAGGAGCACCACCTACAACAATGATATAGATCGTTTATCTCGCTCATCGCTAATCGTCCTCCTCTCTCGGCAAATAGCTATCCTTACTAAAACGATTAAGATCTACCTCTGCAATTCTTTTACTAAGAGCCTTTTTAAGGCCACTATAAACTTTTTCCGCCATCTCCAGCTTTACCTTTAAAGTATTATAAGCTCTGCGATATATCGCCTCTACTAATACCTTATCCTCTGTAAGCTGTTCCACTTTTGCTTTTTTTTCCTGTACGGTACCGCTTACCTTTAACATTGCGTCATTTTGAGCAATCTTTTTGCTGTTAGAAGCTATATCTGCCTGCATACCAAGCTCCTCTACTTTCTGTCCCGCATAGTACATAATCGCCGGTATCTTTACACAGTAGTACTCTATCTGATTATCTGGGATATCCTCTATGGAGTTCTCTCCAATACTATCCATAATCATATCCAGCTCTGATATTGCGCTATCTAAATCTCTACTATACTTGACTATTAGTTCATTAGAAAAACATACTACTGTAGTGCTTTCCTCTTGTACCTCTTTTATGAGTTTACTTAAGATTTCCTGTGCCGCCATTCCCTATCCTCTCCGGCCTCAGCCTAAATTTGGTAGTTATGCACTGTCCCTCTCTTGCCCTTTCTTCCTCAGTCTTTCCGGCCACGCTCCACCAAACTGCATCTCTTGAAAAATCGAACATAGAATAGCACTCAATAAAGCTTAACCCTGTAGCAAGCTGCAACCTGTCGCTATCTACCCAGTTCCCTGCAAAAAACTCCTTTAGTGTTTCCTTACCTAGTTCCGAATCGTATGCTGTCGGCTGTCTATCAATTAGCTCCATTGCATAATTTATCTCCACCTCTGGAATGCTTACACTCTTTATATAGCTCTCTTTTAAGATTTCTGAATCTATAAGTCTACTCATTAAAATACCTCCCTAACCATTCTGCTAAATTATATGAATATCTTACTCTCTTTTTAATCTGCTCTATCCTTAACCCACTATCCCTACACCATTCTACTGGTATGCTTTTCCTCTCTTTTGAGTTTATAAAGGCTACCATTTCCATAACTGATACATAGTAAGTTTCCTCTAAATCTCTAAAGTTTAGAATAAATCCCGCATAAATACCTTTATGCTCTACTGCCCTCGCCATCCCTTTTATCTGGTTATCTCGGATCTTAGTAAGAGGGATACTCCTGCCTTTGTGCGTTTTAAGTTCCAGTAAGAATGTATAAGGGAATTTATAAATCCGATAGTCCGCTGGATTAGATACTCCATAAAATCCAGCGGTATCATCCTTGTACCTTTCAATATAAAAATCTTTCGGGAAACTCTCTTTTATCTCATTTTCAAATACTTTTCCTATTCCTTTTCCCACTACCACTCATCTCCTATTGCCCAAGCATCAAATATAGGGCATCCAGCACAACAAACACCCTCCGCATCATCACAAGGCTCCCCACTAATAATGCATAGAGTACCCGCCTTTTTACAGGACTTTTTAAGGCTTGTAGGGCTCTTTTTCTTCTTAGAGGTAGTATTGCTACCCTCTGCCTTTTTTGTGCCTCTTTTCGCCTTTTTCTTGGCTACTGCGGTGGGATTAGGATGCTCCCACTTACCAGCCTCCACTAAAGAGCACTGCTCCTTAAATTTACAGTAGGTACACTTAGTATCATCCTTAGCTGGAGGAGTTCCTGTTTTAACTCCCTTATTTACCGTGTCTATTTTTTTGAGTACCCTTTCCTTCATCTCGTCCGAGATCTTCCAGAGATATATTTTCTTTCGTAAAAAATTACGATCCTCATAAATAAAGAGTACATAGTCAATACCTAACCCCATTCCATAACTTGTAACCTGCCACTTATGATCCTCTTTCGGCTCGTATCTATTGTTAAAACGGAAAGTACTTTCTGTTTTAATCTCCAGTAGTACCTCTTTTCCCATAAAGCGTATAATTCCATCTGGCTGGAAAAAGATACTCAGCTCATCGTTTTTACATCTGCCCTCTGTATGATCCTCATTCCAGCCTACAAACTCTGTCTTGATGCCTTTTTGATTAGCCTCTTTTACTACTTCCTCAAGATCTAAGCACTCTACCCCGTCCATCATCTCTACGATATACTGTATATCTAAATGCCTGTCCGTTCCGCTCTGACAAATCTCAATAAGTGGTACATCTGACTGCTCCTCTGTAAGAGTTCCGCTATAAACTCTCTGGAAAAAGATCATACGCTCACACCCGTACATACTTGACGGTCGAATATAATCCGCTGGATCCTCTTGCTTTTCGGCTAAATCTTTTTTTCTTACTGCCTCCTCATAGGCTTTTAAGAAACTATCCTCAAAAGATAATTCACTTGCATTTTTCCCTTGAGCTACACGAATTAAACTCTTTAATCCCATCCTGTTACCTCCTCTACATCGTCCTGCTTTATCTTGATAACTAACCTAATCACAGATGAGCGTATTTTTTAGATAAGAAAAAGGAGCTTTTTATAAGCCACCTTATCCCTCGATCATTAGCATCTTATCTATACTCGCCAGATAATAACTACTATCTCTCATTACTTTTTCATACTCTGCCTTACCCTCAAACTCATCTATTACCGCCTGCTCCTCTTTGCTCATCTCATCGTACCCCTTTTTACCGTAATGAGGAGGTAGCCAGTTCCTATTTTGAGCTCCAAAGATATTAAACTTTTTGAGTAGCTCCAGATTAGTAAATTCAATGTGGCAAGTACCCTTTTTGAAAAATGTTACTGTAAAATACTTAAGCTGTATTTTCTTCGTTATTCCTTTAGACTTAGCCTGCACAAGTGCCGAATGTAGATCTACGCTACCTGCACGCCCTCCATCCAGATAATTAAATACTTTCTCTATATCGGATAGCTTTCTCTGCACCTCGTGCTTATCTGGCTCATACTCGCAACTCTTATCCCAGCTCCAATGTCTAAAAGCATTGAGAGGGATAATAACTTTCTTATTGATTACCCAGCTCTTATTAGTTTTCCAACCATTGAAATAATGGATATTTTTACTGGTTTCATCCAAGTAGTGATACTTATGGCTAAAATCTTCAAATAGTTCTAAGATAGTATCCTCTACTCCCTTGATTACCCCTTTAAACATTTCTACTCTAATAGTAGTGATGTTATAAAGAGAAAATTCATACTCCGCCAACTCTTGTACCCTACTCTGATATTCTGATAAGAGTTTACTTGTTAGCCTGCCTGTAAATTTAGGATTACTAAACAGGGCTTTCCAGTATTTCATCCTTACCGATTTTACAAAATTATTGTAGGATAAAGAATTTCCTACTCCGTTTAGGCTTAACTCAAGTATCGGCTTAGAGTATCCATCATTATCAAAACTGTTAAGTATGTGAGGTTTCATAGCATTGTACTCATCTATGAGCTTTACTCCCGCCTCTACTTCTACCTCGTACTGCTTTACAAAAGCCCTTAAAAAATCATTCTCTACCAAGCTAGTAGCCTCTGGATCTTCCTGCTCTTTATACTCCAAGTCTTTCGCTTTTTTTAGAGTTTCCTCAAAGATAAAAGATACCTTTTCTTCTTTCGGTATTGCTACTTTTACAAGTGCTATCTCTACTCCTGTAGTTCTCTCCGCATCTATAAAAGCATCCTCAATATAGTCTATCGTTGCATTATAATCTGTTAGCTTTTGGAGTAAGGCTTTCCTCTCCACTGAGTATGGATTTTTAAGAGTTTCTGCATTGAGTAAGCAAATAATAGCCCCTCCCGCTCTGCTCTGCATTTCCAGCATTTTTAATAAGTGCTTAGCTCCTTGAGAAAATGGTGGATTACTTATAATGAGATCATACTGCTTAAAAGTACTATAACTTAAAAAGTCATCGTGTACTACTCTAAACTCTTTCCCCTTGAGGATCATCTGAAGCTCTGGCTCTATTTCTATCACATCTAAATCCAGCTCGCTCTTTCCTCTCCAACTTGAGCCTATTTTAGCATCATACGCCCTTTTTATTCCCTCTGCTAAATCTCCCTTACCCGCCGATGGCTCTAATACGGATCTCAATCTATAAAAATCTACTCCGTCCAGCATCTTATCAATTAAGCCCTGCGGAGTAGGATAAAAATCATTATTAAACAT

Protein sequences of DBSCAN-SWA_7

>CP027241|2425656:2435554|2426568_2426898_-|AVM69728.1|DBSCAN-SWA
MKKSEESLGAFWDEWKKETEELEKSTQEMVEKIKREAKEKNKILEERWDAINKYKVKVTKCYLVQIFNENLNEIKSEYSFEPTKKDAEAVGYKIVEQLVDEELNSPEIK
>CP027241|2425656:2435554|2431458_2432001_-|AVM69740.1|DBSCAN-SWA
MAAQEILSKLIKEVQEESTTVVCFSNELIVKYSRDLDSAISELDMIMDSIGENSIEDIPDNQIEYYCVKIPAIMYYAGQKVEELGMQADIASNSKKIAQNDAMLKVSGTVQEKKAKVEQLTEDKVLVEAIYRRAYNTLKVKLEMAEKVYSGLKKALSKRIAEVDLNRFSKDSYLPREEDD
>CP027241|2425656:2435554|2433931_2435554_-|AVM69743.1|DBSCAN-SWA
MFNNDFYPTPQGLIDKMLDGVDFYRLRSVLEPSAGKGDLAEGIKRAYDAKIGSSWRGKSELDLDVIEIEPELQMILKGKEFRVVHDDFLSYSTFKQYDLIISNPPFSQGAKHLLKMLEMQSRAGGAIICLLNAETLKNPYSVERKALLQKLTDYNATIDYIEDAFIDAERTTGVEIALVKVAIPKEEKVSFIFEETLKKAKDLEYKEQEDPEATSLVENDFLRAFVKQYEVEVEAGVKLIDEYNAMKPHILNSFDNDGYSKPILELSLNGVGNSLSYNNFVKSVRMKYWKALFSNPKFTGRLTSKLLSEYQSRVQELAEYEFSLYNITTIRVEMFKGVIKGVEDTILELFEDFSHKYHYLDETSKNIHYFNGWKTNKSWVINKKVIIPLNAFRHWSWDKSCEYEPDKHEVQRKLSDIEKVFNYLDGGRAGSVDLHSALVQAKSKGITKKIQLKYFTVTFFKKGTCHIEFTNLELLKKFNIFGAQNRNWLPPHYGKKGYDEMSKEEQAVIDEFEGKAEYEKVMRDSSYYLASIDKMLMIEG
>CP027241|2425656:2435554|2428106_2429114_-|AVM69731.1|DBSCAN-SWA
MAEIDNLIAEVNKKYKTDIIRKASDLKISEFIPYTSPQMNYLTRGGIPVGRMVQLVGLPQSGKTTTALDIISNYQKKDKTRYTVYLDAENTLEKEWGEIIGVDWGRVILIQPEAEYGEQLLDMLLDYIKSGKAGLVVLDSVPFIVPKAVQEKGLDEKSYGGNSALIKSFCDKVVPLLHKNSCTFLALNQLRENIGNPYKPYKIPCGTALAHACSQILWFTKGSLLDEKGNETSSNYGTPSGNLISVKMEKNKVTKNDRRLGTYTLNYFMGVDEIKDTIDMGIVLSIIQQSGAWFTLTLKDGKEKKLQGRAGVQEFFASEKKELEHLRKRVYEATV
>CP027241|2425656:2435554|2430004_2430247_-|AVM69735.1|DBSCAN-SWA
MIEEKITAFLDHLKAQGVEITGETVFICNDGVVLFIPNERGVDIAVVRNPITVDYTLGITDKEVELWTTTAEIVKEMEEN
>CP027241|2425656:2435554|2427734_2427977_-|AVM69730.1|DBSCAN-SWA
MEIRRLKNAKFGTKRIAIIVTGWAFYVEGKGYLAFSNSVDRYGIIVPYIPQGGKLALQAILNGGGFTNFDGIEYVKELGA
>CP027241|2425656:2435554|2430429_2430804_-|AVM69737.1|DBSCAN-SWA
MKEYQKIKFRAWDQECKRWTNYQICDDMLLFFVKHTGVWKRDDTGERFVLMQYTGIKDVDGTEIYEGDILELTLKDEIFRAEVERKKDCFQVVIDGKYSSLLAWVTGLKVIGNVHERWKIEGDV
>CP027241|2425656:2435554|2429667_2430003_-|AVM69734.1|DBSCAN-SWA
MENVTVKDVILDKKMDGYGFKKEDFKAQGEIMVEITLGEYRSLVSGVATKEKDINDANKDKYEREGEIKALKTQVEALKAENYELKKALETKETQFVETAGKDESRKGGEY
>CP027241|2425656:2435554|2427397_2427694_-|AVM69729.1|DBSCAN-SWA
MKLYKDKQGRKLYPVCGWEKNQHKIYNAHDRAMNRLYDEDYSEDAQKEVTRVERALEAFDRYVIQGIVYATYEESCLIKDIVGAYDIRHDMMGNWRTV
>CP027241|2425656:2435554|2430813_2431050_-|AVM69738.1|DBSCAN-SWA
MTKVVWVLEWDFHLYTVNFEEKEVNREILYFDRFEELLATYRKKKNALFMGCLNYNTNFKLYKGNCEEADIKSLDELL
>CP027241|2425656:2435554|2426963_2427383_-|AVM70532.1|DBSCAN-SWA
MSIPNRVELYRKILRGCKAFPIVNSFIQPIDKIQALEAIRKLNTDLADAYMVPLPVITCWVRDDNYVPVTQEIYLTEPELKAFLHQFRHHLQNIERRYERRGLTTEGNLEIADVPYTRCYYSLYGEDDARAWVKFLTED
>CP027241|2425656:2435554|2430243_2430429_-|AVM69736.1|DBSCAN-SWA
MKNYKEVDEEILDMAQTLGSFNVGFIGDISTFIEEMRQEGWNCRLSDTTGRIVCERIRSEK
>CP027241|2425656:2435554|2431975_2432347_-|AVM69741.1|DBSCAN-SWA
MSRLIDSEILKESYIKSVSIPEVEINYAMELIDRQPTAYDSELGKETLKEFFAGNWVDSDRLQLATGLSFIECYSMFDFSRDAVWWSVAGKTEEERAREGQCITTKFRLRPERIGNGGTGNLK
>CP027241|2425656:2435554|2429097_2429295_-|AVM69732.1|DBSCAN-SWA
MGIMDAFNPEDRVEVTKRELLDFMLGKAKTELLVNGLKNGVSNEDMLKVLDVKVLREAVEDGGDR
>CP027241|2425656:2435554|2431060_2431456_-|AVM69739.1|DBSCAN-SWA
MSEINDLYHCCRWCSYYRNGECQKASDIFENPVEGIITGIVEDGKLSEAIQESISPPEFYRLKGVLNEFNISKKRQQEILKAINTDFEDGITDMVEKVDDTVSTLLYNHIGTELEGMEIKDENEFYCKHFL
>CP027241|2425656:2435554|2432339_2432810_-|AVM69742.1|DBSCAN-SWA
MVVGKGIGKVFENEIKESFPKDFYIERYKDDTAGFYGVSNPADYRIYKFPYTFLLELKTHKGRSIPLTKIRDNQIKGMARAVEHKGIYAGFILNFRDLEETYYVSVMEMVAFINSKERKSIPVEWCRDSGLRIEQIKKRVRYSYNLAEWLGRYFNE
>CP027241|2425656:2435554|2425656_2426463_-|AVM69727.1|DBSCAN-SWA
MADKRVTSTDIKIALSKLHSTKSTYFLTECKTCSTYFPDPQGLLKFDGLAITKSYTKPNIIGYEIKISRNDFKQDNKWHLYLQYCNEFYFVVPTGLVTKDELPDNVGLIYYNADTEALRTVKKAQYRLIDKPVGVYEYIIFSRLEEDRLPFYNDRKEYCKDYLEDKINRKYIGDRLGTKMAMDLQQAHKRLYEVEHSENELELWKAVKRVLQDKDILGYWKSDKEMVVNKLKDALSGAFPNELSTVINGLEYYLKTLKRLQEENTIND
>CP027241|2425656:2435554|2429294_2429666_-|AVM69733.1|DBSCAN-SWA
MIGKDYVKMAMVTNDGRANKRIINKLNSEKYDVGGVLNGCLGLSGEAGETLDMIKKWVFHEKELDVEHLKKELGDVMWYMAMICHSMGFDLDEILQMNIEKLRARYPQGFDVARANNREEGDV

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVM69727.1|2425656_2426463_-	hypothetical protein	A0A2P1JTY9	Anoxybacillus_phage	1.7e-40	44.5
AVM69728.1|2426568_2426898_-	hypothetical protein	NA	NA	NA	NA
AVM70532.1|2426963_2427383_-	hypothetical protein	NA	NA	NA	NA
AVM69729.1|2427397_2427694_-	hypothetical protein	NA	NA	NA	NA
AVM69730.1|2427734_2427977_-	hypothetical protein	NA	NA	NA	NA
AVM69731.1|2428106_2429114_-	recombinase RecA	I1TJY4	Clostridium_phage	6.7e-79	45.6
AVM69732.1|2429097_2429295_-	hypothetical protein	NA	NA	NA	NA
AVM69733.1|2429294_2429666_-	nucleotide pyrophosphohydrolase	A0A1D7S9L5	Synechococcus_phage	5.8e-20	47.1
AVM69734.1|2429667_2430003_-	hypothetical protein	NA	NA	NA	NA
AVM69735.1|2430004_2430247_-	hypothetical protein	NA	NA	NA	NA
AVM69736.1|2430243_2430429_-	hypothetical protein	NA	NA	NA	NA
AVM69737.1|2430429_2430804_-	hypothetical protein	A0A0K2CPB0	Brevibacillus_phage	1.0e-08	34.3
AVM69738.1|2430813_2431050_-	hypothetical protein	NA	NA	NA	NA
AVM69739.1|2431060_2431456_-	hypothetical protein	NA	NA	NA	NA
AVM69740.1|2431458_2432001_-	hypothetical protein	D9ZNI0	Clostridium_phage	1.8e-14	25.3
AVM69741.1|2431975_2432347_-	hypothetical protein	NA	NA	NA	NA
AVM69742.1|2432339_2432810_-	penicillin-binding protein-related factor A, recombinase	D9ZNH9	Clostridium_phage	5.1e-21	36.1
AVM69743.1|2433931_2435554_-	DNA methyltransferase	A8HNV9	Thalassomonas_phage	2.2e-15	32.4

Sequences of DBSCAN-SWA_8

Nucleotide sequences of DBSCAN-SWA_8

>CP027241|2707167:2716640|DBSCAN-SWA
ATTAGTGCCGGAAATGCCGGATTTCCGTAAATATCATGGCAATCTGATGCCGGTTGCACATATCAATCGAATCCTGATCCCGGGTTGACCCGCCGGGCTGAATAATCGCCGTAATTCCCACCCGGGCAGCCGCTTCTACGCAGTCGGCAAAGGGGAAAAAGGCATCGGAGGCCAGCACTGCACCTTTTAAGATTTCGCCGCCCAAAGCCTCCCGGCAATGCTCAATCGCCTGCTCCGCCGCCCAAATCCGGTTGACCTGCCCTGTCCCTAAACCAAGCGACTGACTGCCCCTAGCAATGGCAATGCCGTTACTCTTAACATATTTGACCAGCTTCCAAGCAAAGCGCAAATCTTCCATTTCCTGAGCCGATGGCTGCCGCTCCGTCACGCAGCGCAGCTTTTCCGGCCATAAATCCTCGTCATCCCGCTCCTGTATCAGCAAACCGCCGCTGACCTTGCGCAGGTCATAGCCGCCCTTGTTTTTTTGCGCCAATTCCGGCAGTACCAGCAGGCGAATATTTTTCTTGGCGGATAAAATTTCCAGTGCTTCCGGGCTAAAACCGGGTGCCAGCACAATCTCAATAAAAATCTTATGAATCTCGGCGGCCGTGGCAGCGTCAATTTCCCGGTTAGCGACAATAATTCCGCCAAAAATCGACTTAGGGTCAGCCAAATAGGCCTTTTGATAGGCTTTTGAAATTGTCGCGCCGCTCCCCACTCCGCAGGGATTACTGTGCTTGCAGGCCACCACCGTCGGCTGATCAAACTCCTTGCATAGTTCCAGCGCTCCATTTGCGTCATTGATATTGTTATACGACAGTTCCTTGCCGTGCAGCTGCTCCGCTCCGGTCAAAAGCCCTTTTTCGGCGGTAATATCCTGATAATAGGCCGCCGTTTGGTGCGGGTTTTCTCCATAGCGCAGATTCTGCTTTTTTTCAAAGGTCAGAGTCAGCGTTTCCGGATACTGCCGGCCGGTCTTTTCATTTAAATATCCGGCAATCAGCGCGTCATAATTGGCCGTATGGGTAAAAACCTTGGCCGCCAGATAAAAATTAAATTCCGGCGCCGCCTTGCCCTGCCTGAGTTGTTCAATCAATGCCCCGTAATCGGCCGGATCAACCACCACCGACACATCCTGATAATTTTTAGCCGCCGCCCGCAGCATCGACGGCCCGCCGATATCAATATTTTCAATTGCTTCCGCCAGTTCTGCCTCCGACCGTAAAATAGTCTGCTTAAACGGATACAAATTAACAATGACCGCATCAATCGGCTCAATCTTTAAATCCGCCAACTGCCGCATATGCTCCGGATTATTCCGGCAGGCCAAAAGTCCGGCATGAATATGCGGGTGCAGCGTTTTGACCCGACCATCCAAACATTCGGGAAAGCCCGTTATCTCGGCCGCATCCGTCACCGGAATCTGCCCCTCGCGCAGCGTTTTGGCCGTTCCGCCGGTAGAAATTATCTCAAAGCCTAAACTCACCAATTCCCTTGCTAAATAGGTAATACCAGTCTTATCCGAAACACTGATCAGCGCTCTTTTTCCCATTTTTTCCCTCTTTTCTTGGCTCACTCAGTTTCCCCTGCCGGGCGGGATGCCGTAGGTCTTCCGCAACCCGCTCCGTAAAATGACTGTTTTATCAAACACAGGAAAGCTCCGTTATTAATGTATGTTCCGTAAAATATCGCTCATCGCCACGATTTCATCTTCCTCTTTTTCCTCGGCCGGCCGCAGTTTTTCGGCCAGCTCCGCCGTCGCCTTGACCAGCAGCCGATGTTCGACCGCCAGCACCTTTTGCTGCAAGCTCTCCGGTGTTTCATCCGCCGCTACCTTTACCCGTTCCTGATAAAGTACCGGCCCGGTGTCCGTTCCCTCATCCACAAAATGCACTGTCGCACCGCTCTCGGTATCGCCCGCCGCCAGCACCGCCTCATGCACCTTCAGCCCATAGTAGCCCTTGCCGCAATGCCGCGGCAGGAGCGAGGGATGAATGTTTAAAATCCGATTGGGGAAAATGTCAATCCAAGGCTTCGTCAATATCCGCAAATAGCCGGCCAGCACCACAAAATCAGCCTTCGCTTCCAGCACCATGCGCAGCAGCGCCAAATGGTACTCCTGCCGGTTCGGGTATTCCTTGGGATCGACAAAAAACGCCGGTATACCTGCCTTTTCCGCTCTGATCAGACCATATGCATCGGCTCTGTCCGACAGCACCAGCACGATCTCGGCAATCCCTTTGGCATGGACTTCATCAATTAAAGCCTGTAAATTAGAACCATTCCCTGAAATTAAAACAGCAAATCTGGTTCGCATAATCTTACCCCATCCTCTCCGGCAATGACCCGACCAATAGCATAAGTCGCCCAGCCCCTTTGATTCAAGTCATTTTTAATCGCTTCCGCGTCCGCCTCTGCCACCGCTGCAACCAAACCAATTCCCATGTTAAAAGTATGATACATCGCATCCCAGTCCAAATCTCCCCATTCCTGCAAGCGGTTAAAAACTTCCGGCAGAGGATACGATGCTTTTTGAATTTCAGCCGTTAAACCGGACGGCAGCATCCGGGGAATATTTTCATAAAATCCGCCGCCGGTGATATGAGCCAACCCTTTTAACCTATTTTTGCCGAAAAACGGCGCCACCGCCTGATAATAAATTTTGGTCGGCTCCAGCAAGACTTCCCCCACTGTCTGCTTGTCGTTTAATTTTTGACTAAGGGCAATCCCTTTCTGCTCCAATATTTTGCGCACCAGCGAAAAACCATTGCTGTGCAAACCCGACGAAGCCAGCCCCAACAGGACATCGCCCGCCTGAATACTGCTGCCGTCAATGGCCCTGGCCCGGTCGACAATGCCCACGCAAAAACCGGCCACATCATAATCGCCCGGCGCATAAAAGCCCGGCATCTCCGCCGTTTCTCCGCCTATCAGCGCCATTTCAGCCTGCCGGCAGCCGTCAGCCACCCCGGCCACAATTGCTTCGACCTGCTCCGGCCGGAGTTTACCGGTGGCAATATAATCCAAAAAGAACAGGGGTTTCGCCCCTTGGCACAAAATATCATTCGCACACATTGCCACACAGTCAATCCCAATGCTGTCATGCTTATTCATATCAATCGCCAGCTTTAATTTAGTGCCGACTCCGTCCGTTCCGGCAACCAGCACCGGTTTTTCCATCGTTTTGGCCATTTCAATTGAAAACAACCCGCCAAAGCCGCCCAAATCTCCAATTACTTCCGGTGTCAAGGTTGACCGGACATGTTTTTTCATCCGCTTAACCGCTTCATAACCGGCGTGAATGTCGACGCCGGCCTCTTTATAATCCAGTTTTGCCATCTTTTCTCCTTCTACCGCTTGGTCTGATTTTTAAGTTCTTCCGGTATTTCTATGGGATATTCGCCGTTAAAGCAATCCAGATTCAGGCTTTCCTTAGGAATCCCGATTGCTTCCACCAAACCGTCAATACTTAAATACTTTAAGCTGTCCGCACCGATCATTTCACAAATTTCTTCCGTACTGTAATTCGCCCCCAACAGCTCACTGATGACCGGCGTATCAATCCCGAAATAAGTCGGATATTTAATCGGCGGAGAGCTGATCCGAAAATGAATCTCTCTGGCTCCGGCATCCCGTAAAATCTTAATAATCCGCCGGCTGGTCGTTCCCCGGACAATGGAATCGTCAATCAGCACGATTCGCTTATCTCTGACCGCCTCTTTTAAAACACTCAGCTTTAAAAAGACCGCCTGCTCCCGCATTTCCTGCGTCGGCTCAATAAAAGTCCGACCCATATATTTATTTTTAATCAGACCGGCATCATAGGGAATCCCGGACTGCTCCGCGTAGCCCAGCGCCGCCGCAATTCCTGAATCCGGTACAGCCACGACAATATCGGCTTTTACGTCATCGGATTTGGCCAGCAGCCGGCCGGCATTTTTTCGGGTTTCATAAACGCTCTTGCCGTCAATCACCGAGTCCGGCCGGGCAAAATAAACATATTCAAAGCTGCAATGCGCAAGTCTTTGGTTCTCGGCATAGCGAACAGACTCTATCCCCTGATCATTGATAATCACCATTTCCCCGGGCAAAATGTCCCGAACAAACTCCGCTCCGACAATATCCAAAGCGACCGTTTCCGAGGCCAGCATATAACCGTCCCAGAGCCTGCCCAAAACCAGCGGCCGAATCCCGTGCGGATCGCGGATACCGATGAGATTGCCCTCGCACAGCATGGTGAAAGCATACGCTCCCTGAATTCGGTCTAAGGTTTTTAAAATCGCTTCTTTATAACCGGCCTTGTAGTTTTTGGCAATCAGGCTCAATACCACTTCCGAATCGATCGTCGTTTGAAAAATCGCCCCATCTTCTTCCAGTTCCCGCCGGATCTGGTAGGCATTGACTAAATTGCCGTTATGAGCCAGCGCAATACTGCCGCCCCGGTAATTGATCACCAACGGCTGGGCATTCACAATCTGGCTGTCACCGCCGGCTGCATAGCGGACATGACCGATACCGGTATTCCCGCTTAAACTCTGTAACATCTGCCGGGAAAAAACCTCCCGAACCAGCCCCATATCCTTATAGCTTTGCATTTGGCCGTCCCGCAGCAACGCTATCCCGGCGCTTTCCTGCCCCCGGTGCTGCAGCGCCAGCAGCGCCAAAACAATCATATCCGCCACATTCTTGTGGGCATGAATCCCGACCACGCCGCAGGCCTCTTTCAGTTTGTCCTGCACATATTCTCTTTCACTAAAAACTTCTTCTTTTTTCATGGCTGCAATGCTCCGCATTTCTGAGCCGAATTTTCCTGACCGCGCCATGCATTCCGGCAGTCGAAAAGTCCCGCTCCAAACAAGTGTTAAATCCGATGCCGGCTCGCCGGCAGGAGATTTATCATCAGTTAGTAACTCAACTTTCCCATGTTCGTCAGAATAGTCTTTTTTCGTGAGACCGCCCGCCCGGGCAGAAGTGCGCAGCACTTCGATCAGGGGAAAGTTTAGTTAATAAAACTCTTTAAAGATAACTGTCCTTTAAAACTTTCTCGCGCATTTCCGCTTTAAACGCCAGTAGCCGCGGTTTCAATTCCGGATATTTTAAACTCAAAATCTCGGCCGCTAAGATGCCGGCATTTTCCGCACCGTTAATCGCCACCGTCGCTACCGGTACGCCGGACGGCATCTGCACCATAGAAAGCAAGGAATCCAGGCCGTCCATCGTAGAAGATTTAACCGGCAGCCCAATCACCGGCAAAATCGTAACCGCCGCCAGCACTCCCGGCAAATGCGCCGCTTTACCGGCGGCGGCAATCAGCAAATCAATTCCGTTTTCCTCCGCCGCCCGGGCATAAGCCAAGGCTTCATCCGGCGTCCGATGCGCCGACAGCACCCTCACTTCATACTCAATTCCAAACCGTTCCAGCATTTGCCAAACCTTTTCCACCACCGGCAAATCCGACCGGCTGCCCATAATAACCGCTGCTTTCATTGCTCCTCCTATCGTATATCATACTATTACACCGTCTATTGGCCGCTCTCCTTTTCCGACACTGAAAACATCGTATTGATCCGAATTCGCAGCCTGCAAACAAAAGCCTGCCTGCTAAACACATTTGATTTTCAGCCACGGCTGCGCTAAAAGACGGTTTATCTTGCTCCCAAAAGTTAAGCGCTATCTAAAATACTCCACACCAGCGGTAAAAAGATCCTGTCTCTTTTCGCCCCCGATATTTTTAAACAATCCCGCTTCATAGCGCTCGGTATGTCCCATTTTGCCTAAAATCAAACCATCCCGGCTGAGAATCCCTTCCACTGCAAACGCTGAACCATTGGGATTATACTCCCCTTCGCTGTAAGCAGTTCCGCCGGCATCAACGTAGCGGCTGAAAATCTGGTGCTGGGCTGACAAGCGCCGAATCCATTCCGCATCTGCATAAAATCTGCCTTCCCCATGCGACACCGCAATTTCGTGCCGCTCGCCCAGCCGCAGGCCATCCGCCCACGGGCTGCTGATGCTGCAAATTTCGGTGGTTACGATTCGAGAAATATGCCGGCCAATCCGGTTATAAGTCAAAGTGGGCGAATCGGCCTCCAGTTCCCTGATTTCCCCATACGGTAAAAGGCCGGTCTTAATCAGCGCCTGAAAGCCGTTGCAAATTCCTAAAATCAAGTTTTTCTTTTGCTTGACATGGCTGTTAATTACCTCTTTTAACTCCGGCTGGCTCAAAATCGCAGCAATAAACTTGCCCGCTCCGTCCGGTTCATCACCGGCACTGAAACCACCCGCCAAGGCCAAGATCTGCGCCTGCTCAATTTTCCGGCACAGGGCGGCAATGGAATCGGTCAATTCCTGCCGGCTGCGGTTGCGCAGCACCACCGTTTCCACTTCGGCACCGGCCTTGGTAAAAGCTTTCGCCATATCATATTCGCAGTTTGTCCCCGGAAAAACCGGAATGCAAACCAGCGGTTTCATCGTTTTGCTCCGGCTGTGTGCGGTCTGCCGACCGGCTTTCAGCGGCTTTTCCGCCTGCTCCGGCGCTATTGCCGCCAGCGGCTCGCCGCAGACATGGTCTTTAAAAATACCGGCCAGCGGCTTTTGCCAAGCTGCTTTTAACTCGGCTATGCTTACCTTTTGCCCCTGCCAGCTGATTTCCGGCTGCGGATGGATCTGCCCCAAAAGCCGAACCCCGGCTGCCGCTAGTTCTGCCTGCCGCGCTTGCCATTCAGCCGCCGGAACTTCCAGTAAAATACTGCCGTAATCCGGCGCAAATAACTCTGGAATCGCCTCTTTTAGCTGAACACCCAGCTCATTGCCAAAGGCCATCCCGGCAATGGCCGCCGCCAAGGAACTCTCGACCATTTTCGCTGCTAAAATCATGCCTTGCCGGTTCCATTTCTGAATATTGGCAAACATTTCCTTTAAATAATTAAAATCCGGTATTTTCTGCTCTGTCAGTTTAAGCGGATAATACAGCAAGCAAGTCTCGCCGCCCTTTAATTCCGGAGAAATAACCGCCTCGGACTTACCGGCACAAACGGCAAAGGTAATCAAAGTCGGCGGCACATCCAAATCCTCAAAGCTGCCGGACATACTGTCCTTGCCGCCGATGGAAGCCAGTCCCATTTGACTTTGAAAATAATAAGAACCCAACAGCGCCGCCACCGGTTTCCCCCAGCGTTTCGGCTCCCGGCGCAGGCGCTCAAAATACTCCTGACAGGATAGCCGTAGGCACCTGTAATCCGCCCCCAGACAAACTGCCTTCGCCGCCGCCATCACCCCGGCAAACAGGGCACCGTGGAACGGGCTCCAAACCGCCATTTCCGGGCAATAACCATGCGTCATATAGGCTGCATCATCCGTTTCGCCGGCTGTAACAGGAATTTTAAAGACCATGCCGTCTACCTTGCTGGTCTGCGTTTTTCCGCCATAGGGAAAAAGCACCGTCCCCCGTCCGACCGTGCTGTCAAACTTTTCCGCTAAAGAAGTTTGACTGCCGGTATTTAAACTGGATAATTCCGCTAAATATCTGGTTTTCAGTTCTCCGGCCTCGCCCGGCAGCAACTCGCCCTGCTGCGTTCTCCGCCGGAAAAACTCATTTTCGGTAATAGCCGGAACCAATGCGCCGATTTGACCCAAAACACCGTTACTGTCTAAAAACTCGCGGCTCAAATCCAAAATCCGGCTGCCCCGCCAATTCATGCGCAGCCGGCTGTCATCATTAATCACCGCCGCCTTAACCGCCGTGATATTTTCCTCCGCCGCCCAGGCTTCTACTTTAGCCTGATCCTGTGCTTCAATCACAATCGCCATCCGCTCCTGCGACTCGGACACCGCCAGTTCCGTACCGTCCAGACCATCATATTTTTTCGGCAATGCGTCCAAATCAATATCTAGGCCGTCCGCCAACTCGCCAATCGCTACCGCGATGCCGCCCGCGCCAAAATCGTTACAGCGTTTGATGCAGCGGGCAAACTCCGGCCGCCGGAACAAGCGCTGTAATTTTCGCTCTTCCGGGGCATTTCCCTTCTGCACCTCGGCTCCGGCCGTATCAATTGATTCGGTACTATGCGCCTTGGAAGAACCGGTTGCTCCGCCGACACCATCCCGGCCGGTCGCGCCGCCCAGCACCATGACGATATCCCCCGGCTGCGGCTGCAAGCGGCGGACATTTTTTGCCGGGACAGCGGCAATCACCGCTCCCAATTCCATCCGCTTGGCTTTAAAGCCCGGATGATAATACTCTCTGACCTCGCCGGTCGCCAGCCCGATTTGATTGCCATAGCTGCTGTACCCATCGGCCGCTTCCACCGTAATCTTTCTTTGCGGGAGCTTGCCCGCCAGCGTTTGCTCCATGCTCTCGGTGGGATCGGCCGCTCCCGTTATTCTCATCCCGCCAAACACATAGGCCCGCCCCGACAGCGGATCGCGGATTGCTCCGCCCAGGCAGGTAGCTGCTCCGCCAAACGGCTCAATTTCGGTCGGATGGTTATGCGTTTCATTTTTAAATTGCAGTAAATAATCTTCCGTTTCGGTTTGGCCGTCAGCTATTTGACAGCTGACCGGAATCTTAATCGAACAGGCGTTAATCTCCTCCGATTCGTCCAAATCCGGCAGCAGACCCTTTGCTTTCATTTCCTTCATGCCCAGTGTTGCCATGTCCATCAGCGTTTGCGGCTTGTCCGCCGCATATTTAGCCTTATTTTCCCGATAAAGACGGTAGGCCGCCTGCTTAACCGGCAGGTAATCGTCCGGTTCCCAGTCAATTTCCGTCAGCACCGTGGCAAAAGTAGTATGGCGACAGTGATCCGACCAATAGGTGTCAATCACCTTTAATTCCGTGACACTGGGATCACGGCCTTCCTTTTGAAAATATTGCTGGCAAAACAGCAAGTCTTCCTCCGTCATAGCAAACCCGGACTGAGCGTAAAAAGCTTTTATTTCTTCAGCGGAAAGCCGGGTAAAACCGTGATAATATTTAATGTCTTCCGGCCGCCCCAAATCATTTTGCAGGTTCTCCGGCTTAGCCAGCGGAACTTCATGCGAATCGACTTCGTTAATCAAGTAGGCCTTCATTTGCTCTATTTCCTGATCGGAAAAATCACCAGTCAAACCAATTATTTTTTTGCAGCGGAGCACACATTTTTTGCCGGTTACCGCCAATATACACTGGACGGCCGAATCCGCCCGCTGATCAAATTGACCGGGTAAATATTCATAAGCAAAATACCGGGTACCCGCCTGCATCGGCAGCTCTTCCCCGCCCAGCCGGTCGGTATTGACCTCTGACAAGACCTTTTTTAACACCTCTGCCCATTCTTCCTCGGAAAAATCGGCTTCCATATCATAGCAGTTCCATAAATCGACCGCTTTTAATTTAGCGGCAGCAAAAGAAAACATTCCTTTCAGTTCGTCTGAAATCGAATGTTTTTCCTCTGCAAAGGCTTCCTGCTTCTGCACCAAAAATCGCTTGACCAC

Protein sequences of DBSCAN-SWA_8

>CP027241|2707167:2716640|2712182_2712653_-|AVM69965.1|DBSCAN-SWA
MKAAVIMGSRSDLPVVEKVWQMLERFGIEYEVRVLSAHRTPDEALAYARAAEENGIDLLIAAAGKAAHLPGVLAAVTILPVIGLPVKSSTMDGLDSLLSMVQMPSGVPVATVAINGAENAGILAAEILSLKYPELKPRLLAFKAEMREKVLKDSYL
>CP027241|2707167:2716640|2707167_2708718_-|AVM70548.1|DBSCAN-SWA
MGKRALISVSDKTGITYLARELVSLGFEIISTGGTAKTLREGQIPVTDAAEITGFPECLDGRVKTLHPHIHAGLLACRNNPEHMRQLADLKIEPIDAVIVNLYPFKQTILRSEAELAEAIENIDIGGPSMLRAAAKNYQDVSVVVDPADYGALIEQLRQGKAAPEFNFYLAAKVFTHTANYDALIAGYLNEKTGRQYPETLTLTFEKKQNLRYGENPHQTAAYYQDITAEKGLLTGAEQLHGKELSYNNINDANGALELCKEFDQPTVVACKHSNPCGVGSGATISKAYQKAYLADPKSIFGGIIVANREIDAATAAEIHKIFIEIVLAPGFSPEALEILSAKKNIRLLVLPELAQKNKGGYDLRKVSGGLLIQERDDEDLWPEKLRCVTERQPSAQEMEDLRFAWKLVKYVKSNGIAIARGSQSLGLGTGQVNRIWAAEQAIEHCREALGGEILKGAVLASDAFFPFADCVEAAARVGITAIIQPGGSTRDQDSIDMCNRHQIAMIFTEIRHFRH
>CP027241|2707167:2716640|2710516_2711941_-|AVM70549.1|DBSCAN-SWA
MKKEEVFSEREYVQDKLKEACGVVGIHAHKNVADMIVLALLALQHRGQESAGIALLRDGQMQSYKDMGLVREVFSRQMLQSLSGNTGIGHVRYAAGGDSQIVNAQPLVINYRGGSIALAHNGNLVNAYQIRRELEEDGAIFQTTIDSEVVLSLIAKNYKAGYKEAILKTLDRIQGAYAFTMLCEGNLIGIRDPHGIRPLVLGRLWDGYMLASETVALDIVGAEFVRDILPGEMVIINDQGIESVRYAENQRLAHCSFEYVYFARPDSVIDGKSVYETRKNAGRLLAKSDDVKADIVVAVPDSGIAAALGYAEQSGIPYDAGLIKNKYMGRTFIEPTQEMREQAVFLKLSVLKEAVRDKRIVLIDDSIVRGTTSRRIIKILRDAGAREIHFRISSPPIKYPTYFGIDTPVISELLGANYSTEEICEMIGADSLKYLSIDGLVEAIGIPKESLNLDCFNGEYPIEIPEELKNQTKR
>CP027241|2707167:2716640|2709458_2710505_-|AVM69964.1|DBSCAN-SWA
MAKLDYKEAGVDIHAGYEAVKRMKKHVRSTLTPEVIGDLGGFGGLFSIEMAKTMEKPVLVAGTDGVGTKLKLAIDMNKHDSIGIDCVAMCANDILCQGAKPLFFLDYIATGKLRPEQVEAIVAGVADGCRQAEMALIGGETAEMPGFYAPGDYDVAGFCVGIVDRARAIDGSSIQAGDVLLGLASSGLHSNGFSLVRKILEQKGIALSQKLNDKQTVGEVLLEPTKIYYQAVAPFFGKNRLKGLAHITGGGFYENIPRMLPSGLTAEIQKASYPLPEVFNRLQEWGDLDWDAMYHTFNMGIGLVAAVAEADAEAIKNDLNQRGWATYAIGRVIAGEDGVRLCEPDLLF
>CP027241|2707167:2716640|2712836_2716640_-|AVM69966.1|DBSCAN-SWA
MVKRFLVQKQEAFAEEKHSISDELKGMFSFAAAKLKAVDLWNCYDMEADFSEEEWAEVLKKVLSEVNTDRLGGEELPMQAGTRYFAYEYLPGQFDQRADSAVQCILAVTGKKCVLRCKKIIGLTGDFSDQEIEQMKAYLINEVDSHEVPLAKPENLQNDLGRPEDIKYYHGFTRLSAEEIKAFYAQSGFAMTEEDLLFCQQYFQKEGRDPSVTELKVIDTYWSDHCRHTTFATVLTEIDWEPDDYLPVKQAAYRLYRENKAKYAADKPQTLMDMATLGMKEMKAKGLLPDLDESEEINACSIKIPVSCQIADGQTETEDYLLQFKNETHNHPTEIEPFGGAATCLGGAIRDPLSGRAYVFGGMRITGAADPTESMEQTLAGKLPQRKITVEAADGYSSYGNQIGLATGEVREYYHPGFKAKRMELGAVIAAVPAKNVRRLQPQPGDIVMVLGGATGRDGVGGATGSSKAHSTESIDTAGAEVQKGNAPEERKLQRLFRRPEFARCIKRCNDFGAGGIAVAIGELADGLDIDLDALPKKYDGLDGTELAVSESQERMAIVIEAQDQAKVEAWAAEENITAVKAAVINDDSRLRMNWRGSRILDLSREFLDSNGVLGQIGALVPAITENEFFRRRTQQGELLPGEAGELKTRYLAELSSLNTGSQTSLAEKFDSTVGRGTVLFPYGGKTQTSKVDGMVFKIPVTAGETDDAAYMTHGYCPEMAVWSPFHGALFAGVMAAAKAVCLGADYRCLRLSCQEYFERLRREPKRWGKPVAALLGSYYFQSQMGLASIGGKDSMSGSFEDLDVPPTLITFAVCAGKSEAVISPELKGGETCLLYYPLKLTEQKIPDFNYLKEMFANIQKWNRQGMILAAKMVESSLAAAIAGMAFGNELGVQLKEAIPELFAPDYGSILLEVPAAEWQARQAELAAAGVRLLGQIHPQPEISWQGQKVSIAELKAAWQKPLAGIFKDHVCGEPLAAIAPEQAEKPLKAGRQTAHSRSKTMKPLVCIPVFPGTNCEYDMAKAFTKAGAEVETVVLRNRSRQELTDSIAALCRKIEQAQILALAGGFSAGDEPDGAGKFIAAILSQPELKEVINSHVKQKKNLILGICNGFQALIKTGLLPYGEIRELEADSPTLTYNRIGRHISRIVTTEICSISSPWADGLRLGERHEIAVSHGEGRFYADAEWIRRLSAQHQIFSRYVDAGGTAYSEGEYNPNGSAFAVEGILSRDGLILGKMGHTERYEAGLFKNIGGEKRQDLFTAGVEYFR
>CP027241|2707167:2716640|2708832_2709483_-|AVM69963.1|DBSCAN-SWA
MRTRFAVLISGNGSNLQALIDEVHAKGIAEIVLVLSDRADAYGLIRAEKAGIPAFFVDPKEYPNRQEYHLALLRMVLEAKADFVVLAGYLRILTKPWIDIFPNRILNIHPSLLPRHCGKGYYGLKVHEAVLAAGDTESGATVHFVDEGTDTGPVLYQERVKVAADETPESLQQKVLAVEHRLLVKATAELAEKLRPAEEKEEDEIVAMSDILRNIH

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVM70548.1|2707167_2708718_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase	E3SNU8	Prochlorococcus_phage	5.4e-43	50.8
AVM69963.1|2708832_2709483_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.7e-20	34.0
AVM69964.1|2709458_2710505_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D8KMR0	Synechococcus_phage	4.0e-66	42.9
AVM70549.1|2710516_2711941_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.2e-58	34.8
AVM69965.1|2712182_2712653_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.2e-26	47.0
AVM69966.1|2712836_2716640_-	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.5e-22	25.7