CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP027562	Stenotrophomonas maltophilia strain SJTH1 chromosome, complete genome	6 crisprs	csa3,DEDDh,WYL,cas3,PD-DExK,Cas9_archaeal,DinG	0	4	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP027562_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027562_1

1025237-1025330

Orphan

Consensus_repeat	Method
GGTGGGTGCCGACCTTGGTCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027562_1

>merge|CP027562|1|1025237-1025330|CRISPRCasFinder
GGTGGGTGCCGACCTTGGTCGGCACGGATGCCTCCATGGCCGTTCATCCACGCATGGCGTGGATCTACTGGGTGGGTGCCGACCGTTGGTCGGC

>CP027562|1|1|1025237-1025330|CRISPRCasFinder
GGTGGGTGCCGACCTTGGTCGGCA	CGGATGCCTCCATGGCCGTTCATCCACGCATGGCGTGGATCTACTG
GGTGGGTGCCGACCGTTGGTCGGC

Protein	Signature genes	Signature genes Name	Protein_function
CP027562.1\|AVO29267.1\|1023837_1025202_+\|aminodeoxychorismate-synthase,-component-I	unknown	unknown	gnl\|CDD\|236371
CP027562.1\|AVO29266.1\|1022419_1023682_+\|beta-ketoacyl-[acyl-carrier-protein]-synthase-II	unknown	unknown	gnl\|CDD\|235987
CP027562.1\|AVO29260.1\|1017822_1018017_+\|50S-ribosomal-protein-L32	unknown	unknown	gnl\|CDD\|234901
CP027562.1\|AVO29272.1\|1028766_1029330_-\|hypothetical-protein	unknown	unknown	unknown
CP027562.1\|AVO29258.1\|1016522_1017092_-\|septum-formation-inhibitor-Maf	unknown	unknown	gnl\|CDD\|234855
CP027562.1\|AVO29268.1\|1025409_1026471_+\|endolytic-transglycosylase-MltG	unknown	unknown	gnl\|CDD\|224475
CP027562.1\|AVO29261.1\|1018108_1019086_+\|ketoacyl-ACP-synthase-III	unknown	unknown	gnl\|CDD\|236475
CP027562.1\|AVO29269.1\|1026467_1027133_+\|dTMP-kinase	unknown	unknown	gnl\|CDD\|234814
CP027562.1\|AVO29275.1\|1030784_1031207_+\|hypothetical-protein	unknown	unknown	unknown
CP027562.1\|AVO29270.1\|1027129_1028086_+\|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl\|CDD\|181551
CP027562.1\|AVO29263.1\|1020113_1021058_+\|[acyl-carrier-protein]-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
CP027562.1\|AVO29259.1\|1017205_1017715_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236878
CP027562.1\|AVO29264.1\|1021140_1021884_+\|3-oxoacyl-ACP-reductase-FabG	unknown	unknown	gnl\|CDD\|187594
CP027562.1\|AVO29262.1\|1019163_1019946_+\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|226168
CP027562.1\|AVO29273.1\|1029382_1029790_-\|hypothetical-protein	unknown	unknown	unknown
CP027562.1\|AVO29276.1\|1031274_1032348_-\|phage-tail-protein	unknown	unknown	gnl\|CDD\|222877
CP027562.1\|AVO29274.1\|1030356_1030737_+\|tautomerase-family-protein	unknown	unknown	gnl\|CDD\|379645
CP027562.1\|AVO29265.1\|1022036_1022276_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
CP027562.1\|AVO29271.1\|1028082_1028436_+\|pilus-assembly-protein-PilZ	unknown	unknown	gnl\|CDD\|225756
CP027562.1\|AVO29277.1\|1032338_1032554_-\|phage-tail-protein	unknown	unknown	gnl\|CDD\|227337

Protein	Function_ID	Function_description	E-value
CP027562.1\|AVO29267.1\|1023837_1025202_+\|aminodeoxychorismate-synthase,-component-I	gnl\|CDD\|236371	PRK09070, PRK09070, aminodeoxychorismate synthase component I.	0
CP027562.1\|AVO29266.1\|1022419_1023682_+\|beta-ketoacyl-[acyl-carrier-protein]-synthase-II	gnl\|CDD\|235987	PRK07314, PRK07314, beta-ketoacyl-ACP synthase II.	0
CP027562.1\|AVO29260.1\|1017822_1018017_+\|50S-ribosomal-protein-L32	gnl\|CDD\|234901	PRK01110, rpmF, 50S ribosomal protein L32; Validated.	2.5273e-21
CP027562.1\|AVO29258.1\|1016522_1017092_-\|septum-formation-inhibitor-Maf	gnl\|CDD\|234855	PRK00884, PRK00884, Maf-like protein; Reviewed.	4.38984e-99
CP027562.1\|AVO29268.1\|1025409_1026471_+\|endolytic-transglycosylase-MltG	gnl\|CDD\|224475	COG1559, COG1559, Aminodeoxychorismate lyase [Coenzyme transport and metabolism].	1.96407e-137
CP027562.1\|AVO29261.1\|1018108_1019086_+\|ketoacyl-ACP-synthase-III	gnl\|CDD\|236475	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3.	0
CP027562.1\|AVO29269.1\|1026467_1027133_+\|dTMP-kinase	gnl\|CDD\|234814	PRK00698, tmk, thymidylate kinase; Validated.	6.12998e-91
CP027562.1\|AVO29270.1\|1027129_1028086_+\|DNA-polymerase-III-subunit-delta'	gnl\|CDD\|181551	PRK08769, PRK08769, DNA polymerase III subunit delta'; Validated.	0
CP027562.1\|AVO29263.1\|1020113_1021058_+\|[acyl-carrier-protein]-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	8.37372e-124
CP027562.1\|AVO29259.1\|1017205_1017715_+\|hypothetical-protein	gnl\|CDD\|236878	PRK11193, PRK11193, 23S rRNA accumulation protein YceD.	6.35468e-29
CP027562.1\|AVO29264.1\|1021140_1021884_+\|3-oxoacyl-ACP-reductase-FabG	gnl\|CDD\|187594	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs. This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	1.64823e-124
CP027562.1\|AVO29262.1\|1019163_1019946_+\|serine/threonine-protein-phosphatase	gnl\|CDD\|226168	COG3642, COG3642, Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms].	0.00327296
CP027562.1\|AVO29276.1\|1031274_1032348_-\|phage-tail-protein	gnl\|CDD\|222877	PHA02561, D, tail protein; Provisional.	4.25894e-79
CP027562.1\|AVO29274.1\|1030356_1030737_+\|tautomerase-family-protein	gnl\|CDD\|379645	pfam14552, Tautomerase_2, Tautomerase enzyme.	7.21056e-41
CP027562.1\|AVO29265.1\|1022036_1022276_+\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	3.90537e-35
CP027562.1\|AVO29271.1\|1028082_1028436_+\|pilus-assembly-protein-PilZ	gnl\|CDD\|225756	COG3215, PilZ, Tfp pilus assembly protein PilZ [Cell motility and secretion / Intracellular trafficking and secretion].	9.07782e-60
CP027562.1\|AVO29277.1\|1032338_1032554_-\|phage-tail-protein	gnl\|CDD\|227337	COG5004, COG5004, P2-like prophage tail protein X [General function prediction only].	2.88817e-16

>CP027562.1|AVO29267.1|1023837_1025202_+|aminodeoxychorismate-synthase,-component-I
MTHAPLIHPLPHPIDLLALQQHDPARFPLLMESTASGTAQGRWSLLLAAQGDGLRLDADGQVRDQHDAVHAGSFLQVLDRAWQRERLPHDGSHSLPFRGGWALMLDYEVASQIEPVLPARAREDGRPTALALRCPAAVLHDHHNDASFVIAEAGEDALLDVLVELASAALPEAGQGWQPPQSVGEDAPKRFTDGVRRVIDYLRAGDVFQVNLSRRWSAQFAAPVSPQALYAQLRRANPAPFAGLFSAHGRHVVSSSPERLVSVHAGHAQTRPIAGTRPRFEGDDDAARIQELVGHPKERAEHVMLIDLERNDLGRICLPGTVVVDELMTVESYAHVHHIVSNVSGHLRPEVTPGEVIAATFPGGTITGCPKVRCMQIISELEQVPRGAYTGAFGWLNRDGDLDLNILIRTAEVDGHEVSFRTGAGIVVDSDPDKELDETRAKARGLLRALGQQG
>CP027562.1|AVO29266.1|1022419_1023682_+|beta-ketoacyl-[acyl-carrier-protein]-synthase-II
MKRRVVVTGLGIVSPLGNDLASSWEGITQGRSGIGPLTNVSDAYLDRFTTRIAGEVKGFDITADNELFGKFRVSGKDAKKMDPFIHYGLGASFMALHDSGLEITDANADRIGAIVGAGIGGLLGIEEQTIEFHEGKKISPFYVPKTIINMLPGQLSIITGLKGPSFSAVSACATSNHSIGTAMRMIQYGDADVMVVGGAERGSSPTAVGGFCAMKAMSTRNDAPEQASRPWDKDRDGFVLGDGAGILILEEYEHAKARGAKIYCELAGFGASSDAYHMTAPSENGEGAARCMVMAMKDAGVTPEQVGYLNAHGTSTPLGDLGETMAMKTAFGDHAYKMMVSSTKSMTGHLLGAAGGVEAIFSVMALQDNVIPPTINLQQPGEGCDLDYVPNEARQAKVDVVMSNGFGFGGTNGTLIFKRV
>CP027562.1|AVO29265.1|1022036_1022276_+|acyl-carrier-protein
MSTIEERVKKIVVEQLGVKEEEVTNSASFVDDLGADSLDTVELVMALEEEFECEIPDEEAEKISTVQAAIDYVKAHVKA
>CP027562.1|AVO29264.1|1021140_1021884_+|3-oxoacyl-ACP-reductase-FabG
MSKPLQGEIALVTGASRGIGAAIADLLAAQGATVIGTATTESGAAAIGERLAAHGGHGRALNVTDAAALDSVLDGIAKEFGPISILVNNAGITRDNLLMRMKDEDWASIIDTNLTSVFRTSKAVMRGMMKARKGRIINIASVVGVTGNAGQANYAAAKAGIIGFSKSLAKEIGSRGVTVNVVAPGFIDTDMTKALPEEARTALINDIALERLGSPEDIAHAVAFLASPAAGYITGETLHVNGGMYMP
>CP027562.1|AVO29263.1|1020113_1021058_+|[acyl-carrier-protein]-S-malonyltransferase
MTVSTLAFVFPGQGSQSVGMVAELAELHPQVRDAFTEASDGAGVDLWALSQGGPEEMLNRTEYTQPALLAASIGVWRAWNAVGGPRPSVLAGHSLGEYTALVAAGALSLHDGAHLVRLRGQLMQEAAPAGVGAMAAVLGAEDQLVLDVCAEAAGSQVVVPANFNSPGQIVIGGDADAVDRALALLAEKGVRKAVKLAVSVPSHTPLMREAANRLAEVMAGLSWQAPQLPVVQNVDAQVHDGIDAIRTALVQQLYQPVQWTGCVQALAARGVTRIAECGPGKVLTGLVKRIDKAIDGRSLATPGDFEGAREAWSA
>CP027562.1|AVO29262.1|1019163_1019946_+|serine/threonine-protein-phosphatase
MVEPIVIEGQRAWLKQYGKGSRALALGLLNFVARRFHLDALRPPPHRGGDAARETEARRLGELQAQGVNVPDVLGTGHAALVIGDNGNSFNTCLRQADEAGRDRLVMAAMRAIAEAHGRGAYFGQPLPRNLTWDGHQVGFIDFEEDPLEVMDLSEAQARDWLMFGYGVAKYYADRPEQLQAMMAEAMGDAQAPVREHVHAVSGRLRSLARVCMKLGRSARALAHSIFIAHGASTAGVLMLVGLCVDFLADGELDVLQLFC
>CP027562.1|AVO29261.1|1018108_1019086_+|ketoacyl-ACP-synthase-III
MSKRIYSRIAGTGSYLPEKVLTNADLEKMVETSDEWIQSRTGIRERHIAAEGETTSDLGYNAALRALEAAGIDASQLDMIVVGTTTPDLIFPSTACLIQAKLGVAGCPAFDVNAACSGFVFALGVADKFIRSGDCKHVLVIGTETLTRMVDWNDRTTCVLFGDGAGAVVLKADEDTGILSTHLHADGSKKELLWNPVGVSTGFKDGANGGGTINMKGNDVFKYAVKALDSVVDETLAANGLDKSDLDWLIPHQANLRIIEATAKRLEMSMDQVVVTVDKHGNTSSGSVPLALDAAVRSGKVERGQLLLLEAFGGGFTWGSALLRY
>CP027562.1|AVO29260.1|1017822_1018017_+|50S-ribosomal-protein-L32
MAVQKSRVTPSRRGMRRAHDALSAKQLSTDPTTGEVHLRHHITADGFYRGKKVIQTKTSAVEED
>CP027562.1|AVO29259.1|1017205_1017715_+|hypothetical-protein
MSANVPETLDAWRMVVARRRFDGQVSLAELTRLQGLVADTEGECSYSLEFGRDDVLRVSYVELTIDTALPLTCQRSMQRFLLPVKMTQRLGLIRDEDEESSLPEEYEALLVPEDGQLRPLDLVEDELVLAVPVVPLSPDGEAVDKDWAPSEEEAKKANPFAALAALKKQ
>CP027562.1|AVO29258.1|1016522_1017092_-|septum-formation-inhibitor-Maf
MSLVLASTSRYRRELLQRLGLPFDCARPDVDETPLNGEAPLALATRLAAAKAAEVAARHPGVWVIGSDQVADLNGQPLGKPGTVEAACAQLAAMSGQIVRFHTAVCLSRDGDSFTTLDLTEVRFRALEQDEIARYVAAEQPLDCAGSFKCEGLGISLFEAIDNRDPTALIGLPLIAVCGLLRRAGFAVP
>CP027562.1|AVO29268.1|1025409_1026471_+|endolytic-transglycosylase-MltG
MAGAKRGCLFVVTLVVVLAAVVAGAGAWFFYQQTRFADAPITPSAESMVIASGDGMNTVLRKLRDAGVDEGQDTQWQLLARQLDAAGKLKVGEYALSADLTPRELLLRMRAGKVLQHRVTIIEGWNIRQLRAALKRAEPLLHTTDNLDDAALMQRLGFGGQHPEGRFLPETYVYQRGDSDLDVLKRAHAAMEKALDEAWESRAPDLPINTPYELLTMASIIEKETALASERPQIAGVFMRRLKIGMRLQTDPTVIYGIGAAYDGNIRRRDLTTDTPYNTYTRAGLTPTPIAMPSRDALMAAAQPAAGDALYFVAVGDGSGAHVFSPSLDQHNAAVARYLQQLRQQRTQETPAQ
>CP027562.1|AVO29269.1|1026467_1027133_+|dTMP-kinase
MSPALLRHPRFVSLEGGEGAGKTTAINAIRDCLRGHGHEVVLTREPGGTPLAERIRGLVLKPDAEIAAEPLSAEAELLLVFAARAQHVRQVIQPALQRGAYVLSDRFTDSSYAYQGGGRGLDPQWIADLERRAVGLLPGLTLLLDVDVAVGRARANGRDLWPDRIESEQDDFFQRVREVFRSRAQQDPQRFALIDAGQVQARVAADVVAQVERWLQDGEGA
>CP027562.1|AVO29270.1|1027129_1028086_+|DNA-polymerase-III-subunit-delta'
MSTFSPWQQRAFDQTVAALDADRLGHGLLICGPAGLGKREVALALADHVLARGDAAHATRTRQLIAAGTHPDLQLVSFIPNKSGDKLRTEIVIEQVREITDKLALTPQYGVAQVVIVDPADAINRSAANALLKTLEEPQPGRYLWLISSDPARLPQTIRSRCQRLEFKLPPQHEALAWLQQQGHSEASAREALDAARGHPGQAHNWLREDGLSLRREVGRELEQLAAGKTGAVELAQKWCGDDNAALRLRFAADLALAQASTDALTTPERLHKLAAWFDAANRTRDLLRTTVRADLAVVELLLAWNKVNERPAARGNR
>CP027562.1|AVO29271.1|1028082_1028436_+|pilus-assembly-protein-PilZ
MSASNARQGILSLAVKDKAALYSAYMPFVKNGGIFVPTPKRYFLGDEVFLLLTLPDSSERLPVAGKVIWVTPAGAQGNRTAGIGVQLADGAEGEGVRHKIETLLAGLTSSDKPTHTM
>CP027562.1|AVO29272.1|1028766_1029330_-|hypothetical-protein
MDAEHLEYFKAALEGRASVGWNVWFAANQQALAQHLSRPALLRLKFSKLDEAERLLAEAGIVPRSTAGKRYEMYCAQFSADVVDANGRPLPAIWRAAHGGAIGLLADGEHEAGQAKLLSEFRRTRKRGLQQAHEWLADLCFEGEMELTSGNAEVGRSLLAVVVRAGSGHDLLDATAMIARELLEDLG
>CP027562.1|AVO29273.1|1029382_1029790_-|hypothetical-protein
MTNRIAIRPRLHALIGDIASDMPEDLAREIECALHEQNLPVQSPAFFACLNAISRADSDDGQPCSSLTLGASNHASLRRSMSGLTAVLDLLQAADRARNEGGPDEQSGAFHTDGLIVAARQLVREAHHCLSSGDA
>CP027562.1|AVO29274.1|1030356_1030737_+|tautomerase-family-protein
MPLARIDLRKGKSADYLQRVGETIYQAMRAVGVPENDRFQIFQQHAPGTLIYDSGYLGVDRTDDFICIQITWNEGRTLEQKKALYAGIADGLHAAVGIRREDVFINLVEVKKENWSFGNGQAQYVI
>CP027562.1|AVO29275.1|1030784_1031207_+|hypothetical-protein
MGSRIFRTLGIALVLWGVLVPGRGSAADPMRTALPIVTSQMKAEQMLDSIHRMPPLEGAQKQDISGFVKQRLPPRMGLLNVKAAFEDIPTVRISRPADGVLVVRDERRRWLWSRTHVVVMTYRFTYMPEQAKVHAVRYTE
>CP027562.1|AVO29276.1|1031274_1032348_-|phage-tail-protein
MGLNVEPAFRVVANSEDITDKIMSRFKSLRITDETGNTADTLELQLADHDPSDPIQLPPVGAELEAFIGYDGEVRRMGLYICDEVEISGYPGSMTLRARAAPFETSKGGKNDLQTQKTRTWKKGTTIGGMVQRMAGEHGLSAAVSESLASIVLPLTVQSQESDMNLLLRLGKQHDAIVKPGGGRLMFVTRGESTTASGERIPDVTLTPADGSAYKVTIASRDKAGTTIAYYRDVRGANRQEVKVGSGEPIVRLRMAYADRATAEAAARAKQREQARQTRKLSYTLPGRQTLMAEATVVMQGFRDGVDGRWLVKHAEHSIGNDGYVTSIECEQPNSADAVKAASSAPATEGEQVGSEV
>CP027562.1|AVO29277.1|1032338_1032554_-|phage-tail-protein
MARTYNTRDGDVVDRIAYAHYGEQSPAILRAVFDANPGLAARGAVLPAGLVITLPGVQRPANERSGVSLWD

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Crispr_ID: CP027562_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027562_2

1125205-1125353

Orphan

Consensus_repeat	Method
GGCCACCGACACCGCGTCACGGTGCGAACCAAGGTTCGCACCCACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027562_2

>merge|CP027562|2|1125205-1125353|CRISPRCasFinder
GGCCACCGACACCGCGTCACGGTGCGAACCAAGGTTCGCACCCACCAGAAGGCGGTTCGCATCCGCCGAAGTGGAACAGTAGATCCACGCCGTGCGTGGATGCGGCCACCGACACCGCGTCATGGTGCGAACCAAGGTTCGCACCCACC

>CP027562|2|2|1125205-1125353|CRISPRCasFinder
GGCCACCGACACCGCGTCACGGTGCGAACCAAGGTTCGCACCCACC	AGAAGGCGGTTCGCATCCGCCGAAGTGGAACAGTAGATCCACGCCGTGCGTGGATGC
GGCCACCGACACCGCGTCATGGTGCGAACCAAGGTTCGCACCCACC

Protein	Signature genes	Signature genes Name	Protein_function
CP027562.1\|AVO29379.1\|1133473_1134151_-\|Fe2+-dependent-dioxygenase	unknown	unknown	gnl\|CDD\|235483
CP027562.1\|AVO29367.1\|1119912_1120182_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
CP027562.1\|AVO29375.1\|1128942_1129461_-\|DUF2271-domain-containing-protein	unknown	unknown	gnl\|CDD\|226182
CP027562.1\|AVO29363.1\|1115707_1116877_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
CP027562.1\|AVO29368.1\|1120252_1121746_-\|peptidase-M20	unknown	unknown	gnl\|CDD\|349931
CP027562.1\|AVO29364.1\|1116876_1117584_+\|DnaA-regulatory-inactivator-Hda	unknown	unknown	gnl\|CDD\|181541
CP027562.1\|AVO29370.1\|1122624_1123710_+\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|235709
CP027562.1\|AVO29371.1\|1123726_1124452_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379310
CP027562.1\|AVO29374.1\|1128063_1128867_-\|DUF4198-domain-containing-protein	unknown	unknown	gnl\|CDD\|378467
CP027562.1\|AVO29373.1\|1125438_1127043_-\|sulfite-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|99797
CP027562.1\|AVO29376.1\|1129487_1130126_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374499
CP027562.1\|AVO29380.1\|1134950_1137239_-\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|227115
CP027562.1\|AVO29377.1\|1130331_1132752_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|227112
CP027562.1\|AVO29372.1\|1124486_1125095_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377578
CP027562.1\|AVO29369.1\|1121873_1122272_+\|DNA-transport-competence-protein	unknown	unknown	gnl\|CDD\|129520
CP027562.1\|AVO29378.1\|1132898_1133309_-\|hypothetical-protein	unknown	unknown	unknown
CP027562.1\|AVO29366.1\|1118822_1119848_-\|aminoglycoside-phosphotransferase	unknown	unknown	gnl\|CDD\|225719
CP027562.1\|AVO29381.1\|1137390_1137795_-\|hypothetical-protein	unknown	unknown	unknown
CP027562.1\|AVO32629.1\|1127039_1128011_-\|thiamine-biosynthesis-protein-ApbE	unknown	unknown	gnl\|CDD\|224394
CP027562.1\|AVO29365.1\|1118115_1118826_-\|mannose-1-phosphate-guanylyltransferase	unknown	unknown	gnl\|CDD\|133044

Protein	Function_ID	Function_description	E-value
CP027562.1\|AVO29379.1\|1133473_1134151_-\|Fe2+-dependent-dioxygenase	gnl\|CDD\|235483	PRK05467, PRK05467, Fe(II)-dependent oxygenase superfamily protein; Provisional.	1.35721e-143
CP027562.1\|AVO29367.1\|1119912_1120182_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	2.52504e-11
CP027562.1\|AVO29375.1\|1128942_1129461_-\|DUF2271-domain-containing-protein	gnl\|CDD\|226182	COG3656, COG3656, Predicted periplasmic protein [Function unknown].	2.45449e-69
CP027562.1\|AVO29363.1\|1115707_1116877_+\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	7.63714e-59
CP027562.1\|AVO29368.1\|1120252_1121746_-\|peptidase-M20	gnl\|CDD\|349931	cd05682, M20_dipept_dapE, uncharacterized M20 dipeptidase. Peptidase M20 family, unknown dipeptidase-like subfamily (inferred by homology to be dipeptidases). M20 dipeptidases include a large variety of bacterial enzymes including cytosolic nonspecific dipeptidase (CNDP), Xaa-methyl-His dipeptidase (anserinase),and canosinase. These dipeptidases have been shown to act on a wide range of dipeptides, but not larger peptides. For example, anserinase mainly catalyzes the hydrolysis of N-alpha-acetylhistidine while carnosinase degrades beta-alanyl-L-histidine. This family includes dapE (Lpg0809) from Legionella pneumophila.	0
CP027562.1\|AVO29364.1\|1116876_1117584_+\|DnaA-regulatory-inactivator-Hda	gnl\|CDD\|181541	PRK08727, PRK08727, DnaA regulatory inactivator Hda.	6.49367e-134
CP027562.1\|AVO29370.1\|1122624_1123710_+\|L,D-transpeptidase	gnl\|CDD\|235709	PRK06132, PRK06132, hypothetical protein; Provisional.	4.75256e-126
CP027562.1\|AVO29371.1\|1123726_1124452_+\|hypothetical-protein	gnl\|CDD\|379310	pfam13645, YkuD_2, L,D-transpeptidase catalytic domain. This family is related to pfam03734.	3.30947e-90
CP027562.1\|AVO29374.1\|1128063_1128867_-\|DUF4198-domain-containing-protein	gnl\|CDD\|378467	pfam10670, DUF4198, Domain of unknown function (DUF4198). This family was previously missannotated in Pfam as NikM.	3.19908e-62
CP027562.1\|AVO29373.1\|1125438_1127043_-\|sulfite-reductase-subunit-alpha	gnl\|CDD\|99797	cd06200, SiR_like1, Cytochrome p450- like alpha subunits of E. coli sulfite reductase (SiR) multimerize with beta subunits to catalyze the NADPH dependent reduction of sulfite to sulfide. Beta subunits have an Fe4S4 cluster and a siroheme, while the alpha subunits (cysJ gene) are of the cytochrome p450 (CyPor) family having FAD and FMN as prosthetic groups and utilizing NADPH. Cypor (including cyt -450 reductase, nitric oxide synthase, and methionine synthase reductase) are ferredoxin reductase (FNR)-like proteins with an additional N-terminal FMN domain and a connecting sub-domain inserted within the flavin binding portion of the FNR-like domain. The connecting domain orients the N-terminal FMN domain with the C-terminal FNR domain. NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues, and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule, which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	3.16678e-119
CP027562.1\|AVO29376.1\|1129487_1130126_-\|hypothetical-protein	gnl\|CDD\|374499	pfam16357, PepSY_TM_like_2, Putative PepSY_TM-like. This is a family of bacterial proteins with three PepSY-like TM regions.	1.01528e-100
CP027562.1\|AVO29380.1\|1134950_1137239_-\|TonB-dependent-siderophore-receptor	gnl\|CDD\|227115	COG4774, Fiu, Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism].	0
CP027562.1\|AVO29377.1\|1130331_1132752_-\|TonB-dependent-receptor	gnl\|CDD\|227112	COG4771, FepA, Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism].	0
CP027562.1\|AVO29372.1\|1124486_1125095_+\|hypothetical-protein	gnl\|CDD\|377578	pfam05962, HutD, HutD. HutD from Pseudomonas fluorescens SBW25 is a component of the histidine uptake and utilisation operon. HutD is operonic with the well characterized repressor protein HutC. Genetic analysis using transcriptional fusions (lacZ) and deletion mutants shows that hutD is necessary to maintain fitness in environments replete with histidine. Evidence outlined by Zhang & Rainey (2007) suggests that HutD functions as a governor that sets an upper bound on the level of hut operon transcription. The mechanistic basis is unknown, but in silico molecular docking studies based on the crystal structure of PA5104 (HutD from Pseudomonas aeruginosa) show that urocanate (the first breakdown product of histidine) docks with the active site of HutD.	2.87904e-55
CP027562.1\|AVO29369.1\|1121873_1122272_+\|DNA-transport-competence-protein	gnl\|CDD\|129520	TIGR00426, Hypothetical_protein_ybaV_precursor., competence protein ComEA helix-hairpin-helix repeat region. Members of the subfamily recognized by this model include competence protein ComEA and closely related proteins from a number of species that exhibit competence for transformation by exongenous DNA, including Streptococcus pneumoniae, Bacillus subtilis, Neisseria meningitidis, and Haemophilus influenzae. This model represents a region of two tandem copies of a helix-hairpin-helix domain (pfam00633), each about 30 residues in length. Limited sequence similarity can be found among some members of this family N-terminal to the region covered by this model. [Cellular processes, DNA transformation].	3.62856e-21
CP027562.1\|AVO29366.1\|1118822_1119848_-\|aminoglycoside-phosphotransferase	gnl\|CDD\|225719	COG3178, COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only].	3.97772e-96
CP027562.1\|AVO32629.1\|1127039_1128011_-\|thiamine-biosynthesis-protein-ApbE	gnl\|CDD\|224394	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism].	1.05019e-97
CP027562.1\|AVO29365.1\|1118115_1118826_-\|mannose-1-phosphate-guanylyltransferase	gnl\|CDD\|133044	cd06422, NTP_transferase_like_1, NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.	3.45541e-83

>CP027562.1|AVO29372.1|1124486_1125095_+|hypothetical-protein
MNIDSLLHTPSQVISSLDYRRERWRNGLGWTREILRLPAQGDDWALRLSVAEIEQDAAFSAFSGVERELVLLQGNGVRLRFDDGRVAEVLPPHGRVRFAGEETLHGELVDGTTHDFNLMWKRELLQAELLHRPLVGAMFFFCEPGVAWALHLLAGQAEFGADSGLPAMQAGDTAWLSAGVRQRHAVQGGGELLAIRISAAGG
>CP027562.1|AVO29371.1|1123726_1124452_+|hypothetical-protein
MTASRLYRLAAFGLLASSASAPALAQTPALAASADDLAALLSRSAPKADRHVLQLAAHAMRCALQRPELGINGDRLSVIDYSRPSTEPRLWVFDLAHQRLLFEEWVAHGRNSGENRTEHFSNRDGSFMSSLGAFTAQETYMGGNGYSLRLAGLEPGFNDRARDRAIVIHGAPYVNPATAQLQGRLGRSLGCPAVRLSVAKPLIDALRGGTMVFAYYPDQDWLKHSQLLAGGCGGQGTLATR
>CP027562.1|AVO29370.1|1122624_1123710_+|L,D-transpeptidase
MLPHRPTTLMLALALALPLLAHAAAPTSAAKPAAAAASAAEVRGPTDLKPGEYLWHPEISPTGPIVLVVSLDEQRAYVYRNGIAIGLTTISSGKAGHETPTGVFTILQKDKDHKSNLYNSAPMPYMQRLTWDGIALHGGSLPGHPASHGCVRLPQAFAQKLFSETQRGDTVVVADAKSSPMTLAYPSVLAPVNARGQALPEAEGGAPAQAWWDGSAAPAGQVGILVSLHDQRLYVLRDGVMIGESPLMADALPAFQGTTLFVMGQGYSDTPSPLDVSQRLHQWTAYPLLGQDRAQATPDLLATPSLPMALPADFARQLYQVLVPGTTLLVTSLPAVRPSPAESGMQPVLESEPPGSTLKGN
>CP027562.1|AVO29369.1|1121873_1122272_+|DNA-transport-competence-protein
MVTDTVPADGIAGRDGQNHKEIHVVPWSVVLRALVLVVWIAGAHAAEPIDINRADAQALQQGLTMVGAAKAEAIVEHRRRHGPFHRVEDLTQVKGIGKAIVERNRQRITVGNRLLPADPVPGSVPVRTVPRR
>CP027562.1|AVO29368.1|1120252_1121746_-|peptidase-M20
MDSAKLGQFVNDKWDSEIVPQLVDYIRIPNKSPMFDANWVQNGYMEQAVTLMENWAKAQQLPGLKVEVVRLEGRTPLIFLEIPATGAETGDDTILLYGHLDKQPEMTGWDDDLGPWTPVLRGDKLYGRGGADDGYAIFGSLAAVLALQAQGLPHARCVVLIEACEESGSYDLPAYVDHLADRIGKPSLVVCLDSGCANYDQLWCTTSLRGLTGGNFTVKVLNEGVHSGDASGVVPSSFRLLRQLLSRIEDQDTGRILIDGMNVEIPAERQEQAKRAAEVVDTEIFEKFPMVDGLRPMNEDLTELVLNRTWRPALSVTGVGGMPALESAGNVLRPQTSVKLSLRLPPTADGKTCGELLKEALLRDPPNGAQVTLDLEKASTGWNAPAMAPWLTQAIDDASQAFFGKPAMYMGEGGSIPFMGMLGEKFPGAQFMITGVLGPHSNAHGPNEFLHIPMGKKVTACVSKVISEHYAASLRGETSGSPVAADSGTRHGDHGCC
>CP027562.1|AVO29367.1|1119912_1120182_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MNGLFGSSSWLYIILVGFFVGLLGRFFMPGNNRMGCLLTIVLGIIGALLAGWFGQYMGWYAPGEPAGFLGAVLGAVAVLAVLRLFSGRR
>CP027562.1|AVO29366.1|1118822_1119848_-|aminoglycoside-phosphotransferase
MTEPASDPQRSAQRLQWARTQLDDSSAVVERASVDAGMRSYWRTTSTRGSHIMMDAPPGLEDPRPWLRMRGLLHDNGLRVPALLAQDLDAGFLLLEDLGGPTLAKILDERNADEWFGRSIEQLLRLQAIPVPADFGQFGEALLQRDAGLFDEWFLQRHLNLELDCGEIEGLQLVHRRLMDNALGQAQLMTHRDYMPRNLMPVENGPAVLDFQDLVRGPIAYDAMSLFKDAFLSWPLQRVDEWLAQYHERARDAGLPVPDRATFLRDADWMGIQRHVKILGLFCRLRYRDNKGHYLDDAPRFITYLDEVLPRYRELAPLQQLLKHRIKPALAELSAPMRVAR
>CP027562.1|AVO29365.1|1118115_1118826_-|mannose-1-phosphate-guanylyltransferase
MKALIFAAGLGERMRPLTLHTPKPLLEVAGKPLIVWHLERLAALGVREVVVNTAWLAEQFPATLGDGSQWGLRLHFLYEGQTPLETGGGILNALPVLGDAPFLVVNGDIWTDFDFATLPREPQGQAHLVLVDNPVQHPDGDYRLDAQGLLHHDRAGPCLTYAGIGVYRPSIVADWRTVIGDAPGSERLPPKFSVVPLQKHFMAQGLMTGQHHRGRWTDVGTVDRLRALDVELAANG
>CP027562.1|AVO29364.1|1116876_1117584_+|DnaA-regulatory-inactivator-Hda
MGVPQLPLALHYPRDQRLETFIGAPDGALAQLRAIAVGASHDWVYLEGAAGTGKTHQALAMCSSAEQAGRLPTYVPLASAAGRVRAALDGLEARELVALDGLDEVAGNREDEIALFDFHNRARAAGVTVLYTAQKAPEELGLVLPDLRSRLGQCVRVLLQPLDEEGRAAVLRERALRRGLAIDEAAIEWLLSHTGRELGGLITLLDWLDRESLAAKRRITVPFLRQVLEEGRPRY
>CP027562.1|AVO29363.1|1115707_1116877_+|AI-2E-family-transporter
MNLTPEAEIAQFLRRLKYILFAGLIGWVVWLLAPILTPFVLALALAWLGDPLVDRIEATGRSRMTGVVLVFAAMVLVIVALLLVLVPMIERQITTLIAVAPQAQAWLMEKGIPWFEQKTGLEVMQWLDPDRLIEWVRSHWQQAGGFATTFMGYVSRSGFAMVTWVVNILLLPILAFYFLRDWDKLVERVASVIPRNQIGTISALARESNEVLGAFIRGQFLVMLALGVIYAGGLSLVGLKLGLLIGLIAGLISFIPYLGATTGILMAIVAALVQAQGFDLKLLILVGVVFTVGQLLESYVLTPRIVGDKIGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVTNVLLRYAHQRYRQSELYVGEKPAIVLDGVVDQPHIIIPNDKGPDLK
>CP027562.1|AVO29373.1|1125438_1127043_-|sulfite-reductase-subunit-alpha
MSTRPSRAWLGNALVLIVLALIAWALLRLHLGEAWWQGAPPARQSQIAAFATVLYALACAALWWRGRPRDDDATGDTAPILLAWSSQTGFARELAERSAEALRGAGVPVRVRGLHEVDAALLAASQRALFIASTTGEGDPPDHALPFLRGVMATPPSLQHLQYGVLALGDRSYGHFCGFGHQLDTWLRQHGAHPLFDAIEVDNADPAALRHWQQLLGQLGGGASELPDWSPAEYQAWTLLQREHLNPGSPGGPVYWLRLQPPDDANAQWQAGDIAEIGPQHASHTVRAWLDAQRFDADTVLDDGQTLLARVARSHLPSLVPPGDLPALLATLQPLPHREYSIASVMADGAVELLLRRQLRADGAPGIGSGWLCDYAAIGEAVQLRLRRNDNFHGVPADVPLLLIGNGTGIAGLRAHLHERTRNGARRTWLLFGERTAAHDFHFGEELQAMLADGTLARLDAVFSRDGGAHRYVQDRLLAEAATLCQWVDEGATILVCGSLQGMAPAVDAVIEQVLGVAGKEALLLAGRYRRDVY
>CP027562.1|AVO32629.1|1127039_1128011_-|thiamine-biosynthesis-protein-ApbE
MTDLQLDIARLGGTTMGTTWSVSLVASRQRDLHPLHAGIQARLDEVVAQMTTWERGSDLSRYNRADAGQWCVLPAETRQVLACAQTIASASGGAFDPTIGPLVALWGFGAHAGVRRQPDDATLQATRERCGWQRLQWQDDALLQPGGLELDLSAIAKGFGVDHVAAWLRGQGIAAALIEVGGELAGYGRKPDGQPWRVLVESAPEEDAHTDTPPRVLALDGKAVATSGDRWHQYQADGEAYSHSLDPRSGRPVRQVAAAVTVVADDAMHADAWATALTVLGRETGMALAEREGLAARYLQRAADGPREFLSSAFQRLLDGQDA
>CP027562.1|AVO29374.1|1128063_1128867_-|DUF4198-domain-containing-protein
MKRTLVLAAALAAALPFSALAHKAWLLPSQTVIAGNAPWITVDGAVSNDLFYFNHVPLRLESVVITAPDGSTVQPQNASTGKYRSVFDVELKQPGTYRIASVNDGLFATYEQNGERKRWRGTAATFGELPKDAKKLEVSQSVGRVETFVTNGAPNDTALKPTNRGIELVAVGHPNDLFAGEETTFRVLVDGKPAAGLEFEIVRGATRYRNAQDELKLTSDAKGEIKVTWPEAGMYWLETGTEDNKTSVKQAAKRRLSYVATLEVLPQ
>CP027562.1|AVO29375.1|1128942_1129461_-|DUF2271-domain-containing-protein
MRVTLTIALSGLLATSPAYATTLDINVEVPKLNVAEYHRPYVAVWLEGADQKVAANLSVWYQQTSNSEGHGTKWLPDLRQWWRKSGRTLQVPVDGVTGPTRPAGKHALSFNDKQPALKQLAPGNYTLVVEAVREVGGRELLKIPFTWPATAAQNGKAQGATELGQVTLAVKP
>CP027562.1|AVO29376.1|1129487_1130126_-|hypothetical-protein
MSRPASSTVQQQQNRGFWLRTLHQWHWISSAVCLIGMLLFAVTGLTLNHAAKIEAKPEVQNQHLELPAALLGQLGTREDGNAPIPRPARQWLDTQLGIAIGGRPAEWSPEEIYLSLPRPGGDAWLSIDRETGAVEYESTSRGAVSYLNDLHKGRNAGPAWGWFLDLFAVACLVFCITGLFLLHLHARQRRMTWPLVGLGLMIPLLIALLLIH
>CP027562.1|AVO29377.1|1130331_1132752_-|TonB-dependent-receptor
MAQRHRVRSSLSRTLLTSAVLAAMAAPALAHGDASGAPQTLDKVVVTASGFEQKVVDAPASISVVSREELSKRPYTNLVDALRDVEGIDVGLEASDKNGRATISMRGLPSEYTLVLIDGRRQSNVGQLYPNNFGGGQFAYLPPLDAIERIEVVRGPMSTLYGSDAMGGVINIITRRNQDSWHGAVTQGFTVQQDDQFGDARTTDLYLSGPLLKDRLSLAVRGSYYDAKASNPEWDALTLPDGSLWERSIGFGGGGKSVANTNWNTGVRLDFRVNDDHELWLDYDVSRQKYDNSEGQTGTLDSLASLWRVGNAVIPNPNGSGTVTRRVVQPRVGYTAYQRYERDQLSLTHQGRYSFGTWQTSLTHSKSSNLGRSLPLTLDERANLQTLWNDVCRRTGGANNCAAGRGNALAALNPSEMARLQAFLPRPLRTMELEGYVLDTMLDLDFGTHKLTVGGQYNDTDMIDGVFGMDGAGYRSNTKQKHRMWALFAEDNWSLTDTLTATFGLRYDDHNVFGSHVSPRGYLVWNASDAWTFKGGVSTGYKTPRPDQLFPGITGFGGQGVLPLVGSPNLKPETSTNYELAAYYEGQRWGFNVTGFFNKFEDKIASGGTFPNCEVARPGSGYCVDIGPGWAALGYSTFTQSVNIDKAETRGAELAGHVDLLDTLQLRGNYTWTKSEQTSGPDKGRPISGTTPAKHMANASLNWQINEAVSLSLIGEGRYDRYRDTLIDSAGARHVRYYEDYTIFHLGGSWKATPWLTVNARVNNLLDKDFVSQSCLLLNPSEFSCVDDYATKDQRRSYWISLNAKF
>CP027562.1|AVO29378.1|1132898_1133309_-|hypothetical-protein
MGTAMRGQRPALASLLAWVAMLVLLLGTLPLLPQAHASAPVQALQVPLEERGGEAPLQEEAPAKLRRATSAPVKSAEKAHPPLLLASQWLRTELELVPATPATPGVRLDWPLAAPDTPWADAPGRRQQRGQAPPLA
>CP027562.1|AVO29379.1|1133473_1134151_-|Fe2+-dependent-dioxygenase
MLLHIPDILSADQVAEFRRRLDAADWTDGRETVGHLGAQAKHNQQLPEASSLRRELGEIILVALARHPLFFSAALPLKYLPPRFNRYSGGGTYGFHVDGAVMNLANGEQLRSDISCTLFLSAPEEYEGGELIISDTYGEHEVKLPAGDLIVYPSSSLHKVNPVTRGARVASFFWVQSMVRDDVERRLLWEMDGSIERLRQTGGDAEAVLQLTGVYHNLLRRWSEV
>CP027562.1|AVO29380.1|1134950_1137239_-|TonB-dependent-siderophore-receptor
MTHITSRKHAPRVSLLATATLAAGFAPLAAHAADSADAGSRKATDLDKVQVRGSWFNPSSPKFTAELLDTPKSVSIVSEKLIAETGATNLQDALRMVPGITFGAGEGGNPTGDRPFIRGFDSQSNIFVDGLRDVGSQTREIFDLEQVEVVKGPSSAYGGRDSGGGSLNLVSKTPKLKNETNASMGIGTDSYARGTVDANYVLGDGTAARLNLMKHESDIAGRDAANVSRWGIAPSIAFGLNGPAQLIASHYHMQSDDLPDAGGFPYGNPNGAPASKWVDGRPMVPDRNNYYGLVDRDFQRTRADISTLDASYDFGGHKLRNIARLGNTSNDYLWTQPDDSQGNPNNYGTLWRRTNSRAVDVKSFADQLGLTGAFQTGALKHSYSAGVEYSDEKMTRGSYLMTPGTSNPLTGNSKCPTTGAATGYNCTSFANPNPNDPWAATHSVYRSDKALDVEQRTKTKSAYLFDTIELNAQWSFNVGLRYDDYSTTLTTPVAGKAPTRVRNDNDFLNYQAGVVFKPLENGSIYLSWGTSSTPPGMDGGDGSDGLSAAVADLKPQDTKNLELGTKWDLFDKRLNLTAAIFHTVMNNARVTIDNGTSQNAGKKEINGFELGFNGQLTDAWSLYGGYTYLDSELKDNGFVCAVSGRTCPSNIYVPSPNNGNVFPNTAKHSANLWTTYRFPIGLTIGAGAFYSDKQYGDVANTKWIASYTRFDAMASYAIQDNISLQLNVQNLTDKTYFTKAYASHYASIAPGRSATLALNVKF
>CP027562.1|AVO29381.1|1137390_1137795_-|hypothetical-protein
MASPAPTATLRQLARQGWPLLVAALLTLLLGWSALHEGRDNGPAAHGWQAHAEDLQQVMPMPAPPADECPHHAAPAPEPPLDDEGTTPCTGLAPPRAALVAHVPLWHSDALRWQLYDPALRLNPGHAPPAPHAS

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Crispr_ID: CP027562_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027562_3

1959128-1959550

Orphan

Consensus_repeat	Method
GTGCCAACCNNGGTTGGCAC	CRT

6 spacers

The CRISPR arrays of CP027562_3

>merge|CP027562|3|1959128-1959550|CRT
GTGCCAACCTTGGTTGGCACGATACGTCCGGCATCTGGACCCCAGATGGGGTGAAGGCCTCTCCCTGTTTGTGCCAACCAAGGTTGGCATCTACCAGGAGCCGGTCGTCGGCCTGCCTGTGGTAGGTGCCAACCTTGGTTGGCACGATCCGTCCGGCGTCTGGACCCCAGATGGGATGACGGCCTCTTCCTGTTTGTGCCAACCAAGGTTGGCACCTACCAAAGGCGGTTCCGAGGCGGTTCCATGTCCGTGGCGGTTCCGTGGGTGTCAACCTTGGTTGGCACGATCCGTCCGGCGTCTGGACCCCAGATGGGATGACGGCCTCTTCCTGTTTGTGCCAACCAAGGTTGGCACCTACCAAAGGCGGTTCCGAGGCGGTTCCATGTCCATGGCGGTTCCGTGGGTGCCAACCAAGGTTGGCAC

>CP027562|3|1|1959128-1959550|CRT
GTGCCAACCTTGGTTGGCAC	GATACGTCCGGCATCTGGACCCCAGATGGGGTGAAGGCCTCTCCCTGTTT
GTGCCAACCAAGGTTGGCAT	CTACCAGGAGCCGGTCGTCGGCCTGCCTGTGGTAG
GTGCCAACCTTGGTTGGCAC	GATCCGTCCGGCGTCTGGACCCCAGATGGGATGACGGCCTCTTCCTGTTT
GTGCCAACCAAGGTTGGCAC	CTACCAAAGGCGGTTCCGAGGCGGTTCCATGTCCGTGGCGGTTCCGTGG
GTGTCAACCTTGGTTGGCAC	GATCCGTCCGGCGTCTGGACCCCAGATGGGATGACGGCCTCTTCCTGTTT
GTGCCAACCAAGGTTGGCAC	CTACCAAAGGCGGTTCCGAGGCGGTTCCATGTCCATGGCGGTTCCGTGG
GTGCCAACCAAGGTTGGCAC

Protein	Signature genes	Signature genes Name	Protein_function
CP027562.1\|AVO30093.1\|1956112_1957945_+\|potassium-transporter	unknown	unknown	gnl\|CDD\|235131
CP027562.1\|AVO30094.1\|1958225_1959104_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|236760
CP027562.1\|AVO30092.1\|1954758_1955895_+\|molybdopterin-biosynthesis-protein-MoeB	unknown	unknown	gnl\|CDD\|236337
CP027562.1\|AVO30100.1\|1966484_1968758_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|372641
CP027562.1\|AVO30088.1\|1950730_1952128_+\|ribosome-biogenesis-GTPase-Der	unknown	unknown	gnl\|CDD\|234628
CP027562.1\|AVO30086.1\|1948866_1949505_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225523
CP027562.1\|AVO30098.1\|1964815_1965118_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376540
CP027562.1\|AVO30096.1\|1961708_1963274_+\|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl\|CDD\|234614
CP027562.1\|AVO32664.1\|1959670_1961128_+\|IMP-dehydrogenase	unknown	unknown	gnl\|CDD\|235507
CP027562.1\|AVO30090.1\|1953143_1953779_-\|lysine-transporter-LysE	unknown	unknown	gnl\|CDD\|224199
CP027562.1\|AVO30095.1\|1961127_1961712_+\|hypothetical-protein	unknown	unknown	unknown
CP027562.1\|AVO30101.1\|1968808_1969189_-\|hypothetical-protein	unknown	unknown	unknown
CP027562.1\|AVO30103.1\|1970359_1970716_-\|hypothetical-protein	unknown	unknown	unknown
CP027562.1\|AVO30091.1\|1953853_1954669_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
CP027562.1\|AVO30085.1\|1947928_1948801_+\|DUF4115-domain-containing-protein	unknown	unknown	gnl\|CDD\|224343
CP027562.1\|AVO30097.1\|1963557_1964754_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|334588
CP027562.1\|AVO30089.1\|1952266_1953049_-\|lysine-transporter-LysE	unknown	unknown	unknown
CP027562.1\|AVO30099.1\|1965198_1966488_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|334588
CP027562.1\|AVO30102.1\|1969444_1970101_+\|hypothetical-protein	unknown	unknown	unknown
CP027562.1\|AVO30087.1\|1949504_1950713_+\|outer-membrane-protein-assembly-factor-BamB	unknown	unknown	gnl\|CDD\|274511

Protein	Function_ID	Function_description	E-value
CP027562.1\|AVO30093.1\|1956112_1957945_+\|potassium-transporter	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	0
CP027562.1\|AVO30094.1\|1958225_1959104_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
CP027562.1\|AVO30092.1\|1954758_1955895_+\|molybdopterin-biosynthesis-protein-MoeB	gnl\|CDD\|236337	PRK08762, PRK08762, molybdopterin-synthase adenylyltransferase MoeB.	0
CP027562.1\|AVO30088.1\|1950730_1952128_+\|ribosome-biogenesis-GTPase-Der	gnl\|CDD\|234628	PRK00093, PRK00093, GTP-binding protein Der; Reviewed.	0
CP027562.1\|AVO30086.1\|1948866_1949505_+\|hypothetical-protein	gnl\|CDD\|225523	COG2976, COG2976, Uncharacterized protein conserved in bacteria [Function unknown].	1.99925e-41
CP027562.1\|AVO30098.1\|1964815_1965118_-\|hypothetical-protein	gnl\|CDD\|376540	pfam01381, HTH_3, Helix-turn-helix. This large family of DNA binding helix-turn helix proteins includes Cro and CI. Within Neisseria gonorrhoeae NGO_0477, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteristic of the whole family.	2.88574e-07
CP027562.1\|AVO30090.1\|1953143_1953779_-\|lysine-transporter-LysE	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	1.24808e-16
CP027562.1\|AVO32664.1\|1959670_1961128_+\|IMP-dehydrogenase	gnl\|CDD\|235507	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed.	0
CP027562.1\|AVO30096.1\|1961708_1963274_+\|glutamine-hydrolyzing-GMP-synthase	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
CP027562.1\|AVO30091.1\|1953853_1954669_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	7.48498e-30
CP027562.1\|AVO30085.1\|1947928_1948801_+\|DUF4115-domain-containing-protein	gnl\|CDD\|224343	COG1426, COG1426, Predicted transcriptional regulator contains Xre-like HTH domain [Function unknown].	9.61198e-29
CP027562.1\|AVO30097.1\|1963557_1964754_-\|hypothetical-protein	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	5.85183e-07
CP027562.1\|AVO30100.1\|1966484_1968758_+\|ATP-binding-protein	gnl\|CDD\|372641	pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. This family represents, additionally, the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.	1.43888e-21
CP027562.1\|AVO30099.1\|1965198_1966488_+\|SAM-dependent-methyltransferase	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	0.00178058
CP027562.1\|AVO30087.1\|1949504_1950713_+\|outer-membrane-protein-assembly-factor-BamB	gnl\|CDD\|274511	TIGR03300, assembly_YfgL, outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. [Protein fate, Protein and peptide secretion and trafficking].	7.22164e-148

>CP027562.1|AVO30094.1|1958225_1959104_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MTDSAPQLPARILDGRRIAEDLLDSLKVRVDARVAAGGSRPGLAVVLVGGDPASTVYVRNKRRAAEKVGIEAHDYDLPAGTTEAELLDLIDQLNADPKINGILIQLPLPGIPDARRLIQRIDPRKDVDGFHPENVGHLALREFGLRPCTPRGITTLLGHTDQPVRGRNATIVGVSNHVGRPMGLELLIAGCTVTSCHKFTPKDVLEQAVRNADILVVAVGRPGIVPGEWVKPGAVVIDVGINRLDDGRLVGDVGFEAASQRASWITPVPGGVGPMTVATLMQNTLEAAEALS
>CP027562.1|AVO30093.1|1956112_1957945_+|potassium-transporter
MAVEAATSELVKVVALLGAAVVMVPLFRRAGLGSVLGYFAAGLAIGPFGLGWFSDPQAILHTAELGVVMFLFVIGLEMRPSHLWSLRKEIFGLGTLQIVTCALVLTSIAKLFGLPWQVAFIGATGFVLTSTAVVMQLLAERGDIALPSGQKIVSILLFEDLLIVPLLALVAWMGPSAGSADGEGSRWLSVAMGVGAIVGLVLVGRFLLNPLFRVLAESKAREVMTAAALLVVLGAALLMQLSGLSMAMGAFLAGVLLSESTFRHQIEADIEPFRGILLGLFFLSVGMALDLGVVAGNWQLILGLVLALMAAKALCIYVVARIMGSDHAQALDRGVLMAQGGEFAFVLFSAAASAGVINLEINANFTAVVVLSMALTPLVVLVYKRVAPKPTVNMDGVDEADGLSGSVLLIGFGRFGQVASQSLLARDVDVTIIDNDVEMIQSAARFGFKIYYGDGTRLDVLHASGAATARAIAVCVDKAEAADRIVELVAHEFPQAKLMVRSFDREHSLRLIHAGVDFQIRETFESAVLFGQAALVELGADEDDAVEIAEQIRRRDAERFELEIAGGGLNAGARMIYGNSPQGVPTPTPFTAPKRESKTLNPQDVPEEEE
>CP027562.1|AVO30092.1|1954758_1955895_+|molybdopterin-biosynthesis-protein-MoeB
MSIQELSPAQARERLAHGAVLIDVREAHERAGGMAEGARGVAKGELQADPAAHLPRQDQEILLICQSGKRSADAAQFLLEAGYTHVASVTGGTVAWREQSLPLVQPLASAADRDFFDRYSRHLLLPQVGEAGQRRLQQARVLVLGAGGLGAPAGFYLAAAGVGHLRFADHDRVERSNLHRQIVHTEASVGQLKVDSARERLLALNPSIEVEAVPERVTSENVDALLEGVDVVLDGSDNFPLRYLLNDACIKHAKPLVYAAIERFDGQVSVFDAGRQRGVAPCYRCLFPEPPPPEFAPNCSEAGVLGVLPGLAGVLQATEVLKLLLGIGEPLVGRLLRFDALGMRFRETSIRPDPHCPVCAPGVPFPGYIDYAAFCRGG
>CP027562.1|AVO30091.1|1953853_1954669_-|AraC-family-transcriptional-regulator
MRSATEFWRDPRMPFVESRRACDSRACHRPHSHDTFSIGAVDAGSSVFTGAAEGPRLLQPGSLVGVPAGRVHACNPLPGQVWSYQMLHLDARWMTEVRAEYDGLPGPDWQQEPIRISHHRPRYQQYCQLNETLFSDDPVSVKEAALIAFVGDLDEHDGVAIAGPPEDAALQRRVQPVMDVLRQRLEHTPSLQELASLAGMSRYQLIRAFRRATGLTPHAWQIDQRIQEARRRLCEGQSLAVVAHALGFADQSHFQRVFKAHAGATPGQYRR
>CP027562.1|AVO30090.1|1953143_1953779_-|lysine-transporter-LysE
MEQFLIIATVHFLALLSPGPDFFLVARTAITSGWRTASGACAGIAVGNGVFIVAAFTGIALLRAGSTGFIAVQLAGCGFLLYLGTLFLRHAGSTTLQASEAATGSRAGGAHGWWRAAGLGALSALLNPKNALFYATLAAMLNGPQASAATKFFYGAWMFGIVLLWDLLVAALVGHPWVLRRFARALPWLERAAGLLMIALALWIVVTLWAG
>CP027562.1|AVO30089.1|1952266_1953049_-|lysine-transporter-LysE
MQQFFIVAVLYGIAMLLPSSNHAKILRTAMGAGGHAAMAASFGIAIGTGVICATTFVATGMLGNRGLWTLAMQCAGCLLLLRLAGMCLRDAGLTPFSPLSLQMPWGLRARSRWPHAEAGCLLALASSSNWMLQFAIAALVTGLVADTGTQAAYVAGLSGVALSLGLLMAWLGSHPRWAQGCCRLLPWLEHAAGLLIGAVSVAYLAGALGMTLVWASITGQVQLPESIPATSQVQPASTSRRGRGMPCALPHCRARRSSPP
>CP027562.1|AVO30088.1|1950730_1952128_+|ribosome-biogenesis-GTPase-Der
MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEDNHFLVVDTGGIAEEEEGLAGATTRQARAAAAEADLILFVVDAREGTSAMDDEILAWLRKLSRPTLLLINKIDGTDEDTVRSEFARYGFGEMLTVSAAHRQGLDDLLDEVIQRLPEEGSGEELDNDPNRIRIAFVGRPNVGKSTLVNRILGEERMIASDVPGTTRDSIAVDLERDGREYRLIDTAGLRRRSRVDEVVEKFSVVKTMQSIEQCQVAVLMLDATEGVTDQDATVLGAVLDAGRALVIAINKWDGLTEYQREQAETMLSLKLGFVPWAESVRISAKHGSGLRELFRAVHRAHESANKTFTTSEVNKALEVAYETNPPPTIRGHVSKLRYVHPAGANPPTFIVHGTRLKELQESYKRYLENFFRKRFKLIGTPVSFIFREGTNPYEGKKNVLTERQVKAKRRLMKHVKGK
>CP027562.1|AVO30087.1|1949504_1950713_+|outer-membrane-protein-assembly-factor-BamB
MSQKVMITRVATVLLMGMALTGCSTMKGWFAGKDAAAKKAQEPAELVKFEPSVKVNKAWSVNLGKGERRIGVRQGPAVANGHVFAAAITGGVHAIDLQTGKKVWTWEPQKEKKKPKLRLSGGPGVGENLVVIGTLDGQVIALDINDGSEKWRARVPGEVIAAPAVAQGLVFVRSNDGRVTAFDAGNGTQKWFNPSELPALTVRGNAPVVTGPGVLFIGKDEGAVAALAMQDGRTLWEQNLGNGEGRTELERMADVDGAPVLEGNTLYVSSFKNQTMAIEGPTGRPLWARDHGGAGGVAVSSGNVFVTDNKGGVFGLDKATGAAMWSQTELARRSLTGPALHGDYVVVGDYKGYVHWLKTSDGAMAARAKSGGDALLAQPVVVDGVLLVQNVDGKLTAFRLAN
>CP027562.1|AVO30086.1|1948866_1949505_+|hypothetical-protein
MAIDDLLDEHEQSERVRSWLRKNGASILGGVAIAIGAIAGWQWYQKDQGGKLASANVEYQKALVGLQQNKLDDAAKAVKALEAGPSSIYGDLAALQLAKAQVDAGKNEEALATLRGVKVEGDLQRVVDQRVARLLVATGKSDEAIKLLGSATDSSSLEIHGDALLAQGKRDEARAHYEKALKSLDVAAPQRRLLETKVMDAGGTVAAPAESV
>CP027562.1|AVO30085.1|1947928_1948801_+|DUF4115-domain-containing-protein
MIDDQTVSALETAAGCGTRLRQAREAAGLTLEDVGSRLRMPVQVVRSLEEEQWQKLGAPVFVRGQLRSYARLLNVDVGQLLEQAQVGPVVPPTLVSHTHTPRARRIAENLGRRMLYVGITAVLAVPVWFATRGHFDGSATPSPNTASLDAIPAAVPVTPSAAGVEPAAPVDVASVPASKPAATPYVASLAPVPRSVPAPAAAGNTLEMQFSGDSWVDIGGPDGATVEKALIKSGESRSFTPGQVTRVTLGNASAVQVQQNGAIVDLTPYQRANVARFQVSSEGSVVPVSH
>CP027562.1|AVO32664.1|1959670_1961128_+|IMP-dehydrogenase
MLRIQAEALTYDDVSLVPAHSTILPKDVNLETRLTRDLKLKLPILSAAMDTVTEARLAIAMAQLGGMGIIHKNLSLEQQAAEVAKVKKFEAGVIRDPITVGPETTIRDVLALTQAHNISGVPVVGSDGLLAGIVTHRDMRFETELDDPVRHIMTKKDRLITVKEGAASDEVLQLLHRNRIEKVLVVNDSFELRGLITVKDIQKNTDFPNAAKDLSTRLLVGAAVGVGGDTDRRVEALVAAGVDVIVVDTAHGHSQGVLDRVSWVKKNFPNVQVIGGNICTGEAALALLDSGADAVKVGIGPGSICTTRVVAGVGVPQVTAIDLVAEALQDRIPLIADGGIRYSGDIGKALAAGASTIMVGGLLAGTEESPGETELYQGRSYKSYRGMGSLAAMEKGSKDRYFQDAATADKLVPEGIEGRVPYRGPVGGIIHQLMGGLRATMGYVGCATIEDMRSKPKFVKISGAGQRESHVHDVTITKEPPNYRA
>CP027562.1|AVO30095.1|1961127_1961712_+|hypothetical-protein
MRLRTALAITGSLLMAGCSLSEPPPRSGSPGAAVSQLQDVQACQNAFSLPKGWQVQAAGEQRWLLKGTGERPLQVTLQCITELLHGPDDPVLMPVLGALEPARMSVRWASWSAADSGASMAALQRRTVPGTEVQEIAELPRADRANPTAPHGLLMLRWDEEDPSHIQQREAFIATLTQSLEAPGAAKNTTGTAP
>CP027562.1|AVO30096.1|1961708_1963274_+|glutamine-hydrolyzing-GMP-synthase
MTNIHNDKILILDFGAQYTQLIARRIRELGVYCEIWAWDHNPAEIAAFGAKGIILSGGPESTTLPGAPAAPQEVFDSGLPIFGICYGMQTLAAQLGGATEAADQREFGHAEVNVINPDALFKGLSDHGGEPKLNVWMSHGDHVSVAPPGFTITATTDRIPVAAMANEEKRWYGVQFHPEVTHTLQGQALLRRFVVDVCGCQTLWTAANIIDDQIARVREQVGDDEVILGLSGGVDSSVVAALLHKAIGEKLTCVFVDTGLLRWQEGDQVMAMFAEHMGVKVVRVNAADRYFAALEGVSDPEAKRKIIGNLFVEIFDEESNKLSNAKWLAQGTIYPDVIESAGSKTGKAHVIKSHHNVGGLPEHMKLGLVEPLRELFKDEVRRLGVELGLPRTMVYRHPFPGPGLGVRILGEVKREYAELLAKADAIFIDELRKADLYDKTSQAFAVFLPVKSVGVVGDARAYEWVIALRAVETIDFMTAHWAHLPYEFLGTVSNRIINELRGVSRVVYDISGKPPATIEWE
>CP027562.1|AVO30097.1|1963557_1964754_-|hypothetical-protein
MHIRTVHPFPARMAPELALRSLRQLPSGSTVLDPMAGSGTVLRQAQALGHRGIGFDMDPLAVLMSRVWTTPVQTQLVQSEFESVQAEAIKVNLRTDRPSWHDAETRQFINYWFATTQRRDLARIAVVLERRRLARLGPSRRAAVDALQVALSRIIVTKEQCASLARDTSHSRPHRVTETTDYCVMRGFSRSVAQVIARLADQQTSSMSNHLETAVNLGDARAIALADGSVDAIMTSPPYLNAIDYMRGHRMSLVWLGYSVSTLRAIRSNTVGAERAGTQDTAVVTDIANAMCAMDTLAPKHQRMILRYANDLQLMMIQAARVLRPTGSATYVLGNSCLKESFIQNSEGVAKAAQHAGLLLVDTSTRELPTGSRYLPVTQSGALSKRMRTETILTFRHP
>CP027562.1|AVO30098.1|1964815_1965118_-|hypothetical-protein
MLTLPYPTLSTLVRRARLHCGDSQQKFALRLGKSQAVVSRYESGKVDPPGNVVMHCMHILGLAPAPTTERGDGKWEEVTEALAALTHAVKRLRPANSRRT
>CP027562.1|AVO30099.1|1965198_1966488_+|SAM-dependent-methyltransferase
MERRFLDVTHVDQLWSRGLSDAPADAAWDVPSTRESRMHRIHAYPAKFPAFLATLGLEYARASGLQPRRIADIFCGCGTVAHEAEREGLDFWGCDINPVATLIARTKSARLSPAHFHRYLEPICRSATSNSEQVALHPDAQERLLRWFAPVQFNALGCLLRAIREIVPVESPYRDAYECVFSSILKSCSQWRQRSIKPALDVSKVPAQVMDSFITRALQFITALDTPHQRPRKGRVQIQLANALTVPAPRKPVDMLITSPPYVTSYEYADLHQLSSLWLGYATDYRDLREGAIGSAQHELNLRRSVAELNHSGAQIVFSLYDRDRRAAQAVANYYIDMQCVARRAKQFLTEGGIAMFVIGNTQYRGIDIDNASHLAESLLAAGFSRVRAVKRSISNKIATPYRDASGRFSRTFIDKHIYGHEYVLMAHP
>CP027562.1|AVO30100.1|1966484_1968758_+|ATP-binding-protein
MTRPKKLKFRPYARLLTMLGDQLIKNERVALVELIKNAYDADASWVKVTFEGFDADFRPSAGSRIIIEDDGTGMTRETIEQHWVNPATPMKLIGKRTQARTKKGRAVQGEKGIGRFALLKIGRDITITTRPARSAAEFIVRLDLSSYNTDFLQDGEGLFLDDLSLTLSEVSPAQTIKRQRVELGPAHEQRRQQGTRIEIAHLSGAWSREKAEAVYDDLTRLQSIFGDVATAVQPEDDHIGTQGALTEQDPFEVFIYRGTQFEPFGRERREQLEALLTERPVFKIEGAYDEAGKAFDFSINGTHQRIELLDERLSGLPVYRQQFMPDKKTNVLNNRTTECGPFRFTFYVFDFSAFADARHKLDDSDKKLIKEHRIYLYRDGIRVYPYGDPTDDWLLIDVRRGTVRASEFLSNDQVVGVVEITQQDNPQLRDKTSREGLVDVGEATDEFRALLQSFLAWVRKDPYAKRQIVRKKQTEVEVFKGNEVDRSFEAASEAIASGNSSTAGEKIDQARKQYKAERRYLVQRAENTEHLAGVGLSVEAASHDLMLGMATALRQLDTLIAQTARGREIAPDVLNRELSSVRGLLSFVEAQMRDMQALFKSTKQRRQNIRVSDVLTKVQGFYGTLLKKREIDFSVSTVGSPLQAMSTDAVLLQLFLNLFDNAVYWLAGRPAPRKIEVLLDGDQQLMIFADNGPGFREEDLPYLFEPFFTGKGEEGRGLGLYIARQLLERQGYRIEVSERGDRILPGANLTISFIQGD
>CP027562.1|AVO30101.1|1968808_1969189_-|hypothetical-protein
MRFSIIIVQYPILHQRPLDNSHVLMGEDEYRRMSMFAQPCQEARVILCQAKCQLRGDDLPLRKVGEVPVHNKERHIGEILQVRVFIWKLIQDDGVTASVTDSFDDGIDAVFVLSNAVIDDYRHTLK
>CP027562.1|AVO30102.1|1969444_1970101_+|hypothetical-protein
MHPFNADLSRFEADVERHALANADSYATSVLQVLEGERIVRSERLESTSFAPGDLFEEIDNEGKSRYFLNVRAECDCVIRGKPKDALLYLLKGRIEKNLDVNHDMGNINEKDNEAIVFGMMDGQTFRFGFRDLVIRPWNELADKRKARLLSPFITRVVQRYAAYSQRPGLPRIPAAVLPIREDGPADEATGDHASPVCSSCTDQCAAEDATSQENSAA
>CP027562.1|AVO30103.1|1970359_1970716_-|hypothetical-protein
MNESDTFSSHTVVEPINDDTPLPDLNSLLGILKRMRGCEGADGHPWPETDVSPGRRVSLARTERALVGLLTVLEVLHSADRCRVAAEPERHLDEGVVEGLFLACRGLAEWACHEIRPE

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Crispr_ID: CP027562_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027562_4

2730249-2730400

Orphan

Consensus_repeat	Method
ACGGCCATCCAGACATTCAGTGGTAGAGCCACGCCATGCGTGGCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027562_4

>merge|CP027562|4|2730249-2730400|CRISPRCasFinder
ACGGCCATCCAGACATTCAGTGGTAGAGCCACGCCATGCGTGGCTGCGCCGGTTGGATACGCGGGAATGGCCCCATCCACGCATGGCGTGGATCTACTGAACCCCACGGCCATCCAGACATTCGGTGGTAGAGCCACGCCATGCGTGGCTGC

>CP027562|4|3|2730249-2730400|CRISPRCasFinder
ACGGCCATCCAGACATTCAGTGGTAGAGCCACGCCATGCGTGGCTGC	GCCGGTTGGATACGCGGGAATGGCCCCATCCACGCATGGCGTGGATCTACTGAACCCC
ACGGCCATCCAGACATTCGGTGGTAGAGCCACGCCATGCGTGGCTGC

Protein	Signature genes	Signature genes Name	Protein_function
CP027562.1\|AVO30716.1\|2721653_2722334_-\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	unknown	unknown	gnl\|CDD\|185014
CP027562.1\|AVO30712.1\|2717329_2718544_-\|coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236430
CP027562.1\|AVO30715.1\|2720949_2721657_-\|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl\|CDD\|376889
CP027562.1\|AVO30723.1\|2730911_2731172_-\|molybdopterin-converting-factor	unknown	unknown	gnl\|CDD\|224888
CP027562.1\|AVO30717.1\|2722333_2723878_-\|nitrate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|224063
CP027562.1\|AVO30713.1\|2718694_2720023_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225133
CP027562.1\|AVO30726.1\|2733428_2734409_-\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|234672
CP027562.1\|AVO30727.1\|2734603_2735008_+\|ribonucleotide-reductase-subunit-alpha	unknown	unknown	unknown
CP027562.1\|AVO30728.1\|2735001_2735331_-\|hypothetical-protein	unknown	unknown	unknown
CP027562.1\|AVO30730.1\|2736488_2736989_+\|hypothetical-protein	unknown	unknown	unknown
CP027562.1\|AVO30725.1\|2732421_2733420_-\|bifunctional-molybdenum-cofactor-biosynthesis-protein-MoaC/MoaB	unknown	unknown	gnl\|CDD\|235138
CP027562.1\|AVO30718.1\|2723877_2727621_-\|nitrate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|227346
CP027562.1\|AVO30729.1\|2735903_2736281_+\|hypothetical-protein	unknown	unknown	unknown
CP027562.1\|AVO30724.1\|2731171_2732425_-\|molybdopterin-molybdenumtransferase-MoeA	unknown	unknown	gnl\|CDD\|238452
CP027562.1\|AVO30719.1\|2727693_2729112_-\|nitrate/nitrite-transporter	unknown	unknown	gnl\|CDD\|184994
CP027562.1\|AVO30714.1\|2720046_2720946_-\|rotamase	unknown	unknown	gnl\|CDD\|131979
CP027562.1\|AVO30722.1\|2730407_2730908_-\|molybdopterin-converting-factor-subunit-2-protein	unknown	unknown	gnl\|CDD\|238385
CP027562.1\|AVO30731.1\|2736985_2737801_+\|hypothetical-protein	unknown	unknown	unknown
CP027562.1\|AVO30720.1\|2729256_2729622_-\|hypothetical-protein	unknown	unknown	unknown
CP027562.1\|AVO30721.1\|2729618_2730161_-\|molybdenum-cofactor-guanylyltransferase	unknown	unknown	gnl\|CDD\|133000

Protein	Function_ID	Function_description	E-value
CP027562.1\|AVO30716.1\|2721653_2722334_-\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	gnl\|CDD\|185014	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone.	3.43814e-56
CP027562.1\|AVO30712.1\|2717329_2718544_-\|coproporphyrinogen-III-oxidase	gnl\|CDD\|236430	PRK09249, PRK09249, coproporphyrinogen dehydrogenase.	3.64782e-32
CP027562.1\|AVO30715.1\|2720949_2721657_-\|respiratory-nitrate-reductase-subunit-gamma	gnl\|CDD\|376889	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit. This family is the gamma subunit of the nitrate reductase enzyme, the gamma subunit is a b-type cytochrome that receives electrons from the quinone pool. It then transfers these via the iron-sulfur clusters of the beta subunit to the molybdenum cofactor found in the alpha subunit. The nitrate reductase enzyme, EC:1.7.99.4 catalyzes the conversion of nitrite to nitrate via the reduction of an acceptor. The nitrate reductase enzyme is composed of three subunits. Nitrate is the most widely used alternative electron acceptor after oxygen.	1.10477e-97
CP027562.1\|AVO30723.1\|2730911_2731172_-\|molybdopterin-converting-factor	gnl\|CDD\|224888	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism].	2.54092e-08
CP027562.1\|AVO30717.1\|2722333_2723878_-\|nitrate-reductase-subunit-beta	gnl\|CDD\|224063	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion].	0
CP027562.1\|AVO30713.1\|2718694_2720023_-\|MFS-transporter	gnl\|CDD\|225133	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism].	3.87997e-126
CP027562.1\|AVO30726.1\|2733428_2734409_-\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	1.42935e-158
CP027562.1\|AVO30725.1\|2732421_2733420_-\|bifunctional-molybdenum-cofactor-biosynthesis-protein-MoaC/MoaB	gnl\|CDD\|235138	PRK03604, moaC, bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA; Provisional.	9.69887e-150
CP027562.1\|AVO30718.1\|2723877_2727621_-\|nitrate-reductase-subunit-alpha	gnl\|CDD\|227346	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion].	0
CP027562.1\|AVO30724.1\|2731171_2732425_-\|molybdopterin-molybdenumtransferase-MoeA	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	5.64824e-131
CP027562.1\|AVO30719.1\|2727693_2729112_-\|nitrate/nitrite-transporter	gnl\|CDD\|184994	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional.	8.03476e-170
CP027562.1\|AVO30714.1\|2720046_2720946_-\|rotamase	gnl\|CDD\|131979	TIGR02933, Putative_peptidyl-prolyl_cis-trans_isomerase_NifM, nitrogen fixation protein NifM. Members of this protein family, found in a subset of nitrogen-fixing bacteria, are the nitrogen fixation protein NifM. NifM, homologous to peptidyl-prolyl cis-trans isomerases, appears to be an accessory protein for NifH, the Fe protein, also called component II or dinitrogenase reductase, of nitrogenase. [Central intermediary metabolism, Nitrogen fixation].	2.6782e-25
CP027562.1\|AVO30722.1\|2730407_2730908_-\|molybdopterin-converting-factor-subunit-2-protein	gnl\|CDD\|238385	cd00756, MoaE, MoaE family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor for a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), which carries the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase in the second major step in Moco biosynthesis. MPT synthase is a heterotetramer consisting of two large (MoaE) and two small (MoaD) subunits.	7.42618e-41
CP027562.1\|AVO30721.1\|2729618_2730161_-\|molybdenum-cofactor-guanylyltransferase	gnl\|CDD\|133000	cd02503, MobA, MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.	4.64653e-41

>CP027562.1|AVO30721.1|2729618_2730161_-|molybdenum-cofactor-guanylyltransferase
MSINGIVLAGGLSSRMGRDKALLPWQGRTLLEHMRGLLMQAGAREVWVSGNYPAFGAVPDRVARCGPLGGLYSVAMRMPDGPAWVVPVDTPLLAPQLLQRLAAERQGACTIFDGHPFPMLLNVDNATRSVLAAMLDDADGPRSVQAFQRRLQMHALRLESVDEACLVNCNTPEQWEDVAS
>CP027562.1|AVO30720.1|2729256_2729622_-|hypothetical-protein
MKVQLQDQSVRLRLDETELARLLAGESVENMTRFGGIEGWGMAVSLHGGDQPVLLDGGTFCRLVLPRPAVEALVARLPCRDGLPFDIALEDGSQLQLQFDVDVRDSVRQRGVARRNTASSV
>CP027562.1|AVO30719.1|2727693_2729112_-|nitrate/nitrite-transporter
MTVGSDPVVRSTARPGRVISDWTPEDPGYWERTGKRVATRNLVISIPSLLLAFSVWVLFSAVSISLPKIGFNFSTDQLFWLVALPSLSGATLRIFYSFVIPIFGGRRWTALSTASLLAPTLWLGFAVQDPATPYGVFVAIAILCGFGGANFSSSMSNISFFYPKQKQGLALGLNAGLGNVGVSVAQAVIPLVITVGVFGALGGAPQPTVEGGAPLFLQNAGFIWVPAIALCAIAAWFGMNDLTSARSSFSEQAVIFRRKHNWLMCWLYIGTFGSYIGFSAGFPMLVKSQFPEVNPLAYAFIGPLLGALMRSVGGSMADRWGGARLTFWVFALMIAAVFGVLHFLPSDGQGGNFHGFLLSFMALFVLSGIGNGTTFRMIPVIFRTLHERWSANDSAEGKATAAHQASIESAAVVGFSGAIGAYGGFFIPKSYGSSITLTGSPDMALYGFVVFYVTCLAVTWWWYYRRGAETPC
>CP027562.1|AVO30718.1|2723877_2727621_-|nitrate-reductase-subunit-alpha
MSYFLDRLQFFKRDPQAFADGHGFAKSEGRDWENSYRARWQYDKIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPLIRGTLLRLWREARKSKGPVDAWASIVEDKEKARSYKTRRGMGGFVRLQWEEANEIIAASNLYTVKQYGPDRVVGFSPIPAMSMVSYAAGARYLSLLGGACLSFYDWYCDLPPASPQIWGEQTDVPESADWYNSRYIIAWGSNVPQTRTPDAHFFTEARYNGTKTVAICPDYSELAKLTDHWLHPKQGTDAALAFAFGHVILREFHVDSPSQYFQDYCRQYSDMPMLVRLERRDDGRLVPGRFLRASELGGLGEANNPDWKTLAYDETSGQIVVPNGSIGFRWGEKGKWNIEEKESKGAETRLRLSLADGHEGIEAVSFPYFGGIETDGWTAAPADDVLERSIPVRRLALADGGETLVATVYDLLLAQYGVDRGFGGGNVASSFDDMVPGTPAWQERITGVSRAEVIEIAREFARTADKTHGRSMIIVGAGMNHWFHNDMNYRGLINMLIMCGCVGQTGGGWAHYVGQEKLRPQTGWQPLAFGLDWSRPPRHMNGTSFFYFNTGQWRYEKLQVDELLSPLADASKYSGSLADLNLRAVRMGWLPCAPQLDRNPLQLVREAEAAGVAPADYALGKFKDGSLDFAFADPDAQQNHPRMMFIWRSNLLGSSGKGHEYMLRHLLGTRHGLQGKDLGEMGAIKPEEVTWRDEAPEGKLDLLVTLDFRMCTTALYSDIVLPTATWYEKDDLNTSDMHPFIHPLSKAVDPAWESRSDWEIFKEVARTVSEMAPGVLGVEKDLVLVPTLHDTPNELGMPFGVADWKKGECEAIPGQTMPSMTVVERDYPNLYRKFTSLGPLLDKLGNGGKGMSWDTKHEVEFLGKLNPTVHDAGVSQGRPAISTAIDAAEVILHLAPETNGHVAVKAWESLGTFTGREHTHLAVGKEHEAIRFRDIQAQPRKIISSPIWSGLEDDNVSYNAGYTNVHELIPWRTVTGRQQFYQDHEWMIDFGEAFMGYRPPVNTRTVEPLLNQRPNGNKEIVLNWITPHQKWGIHSTYSDNLIMQTLSRGGPIVWISEDDARSAGIVDNDWIELFNVNGAIAARAVVSQRVMPGMAMMYHAQERIINVPGSEISGTRGGIHNSVTRIVLKPTHMIGGYAQLAYGFNYYGTCGTNRDEFVIVRKMDKIDWLDGEAVQAAAKEVV
>CP027562.1|AVO30717.1|2722333_2723878_-|nitrate-reductase-subunit-beta
MKVRAQIAMVLNLDKCIGCHTCSITCKNVWTSREGVEYAWFNNVETKPGIGYPKEWENQDKWNGGWVRTRAGKLVPRAGGRWRMLAKIFANPDLPQIDDYYEPFDFDYQNLHTAKDSQHQPTARPRSLISGERMQKIEWGPNWEEILGSEFSKRSRDYNFDQVQKEIYGAFEKTFMMYLPRLCEHCLNPACVSACPSGAIYKREEDGIVLIDQDKCRGWRMCVSACPYKKIYYNWKSGKSEKCIFCYPRIEMGEPTVCSETCVGRIRYLGVMLYDADRIADAASVAAEKDLYQAHLDIFLDPNDPAVIAAARKEGIPDSWLESAKQSPVYKLAIDWKLALPLHPEYRTLPMVWYVPPLSPIQSAAERGRVGMSGELPDVASLRIPMRYLANLLTAGDEAPVVRALERLMAMRAWRRAKNVDGVEDTAVLEQTGLSIAQVEEMYRYLAIANYEDRFVIPTGHREYANDAFGERGGCGFTFGNGCNGDSPADLFGQRKSTAFVVDKGPNHRRKEVV
>CP027562.1|AVO30716.1|2721653_2722334_-|nitrate-reductase-molybdenum-cofactor-assembly-chaperone
MSVLKLVGVLLDYPREELWQHGEELLAACDDPALNAARRQQLRSFVQQLLATDALDAQAAWLASFDRGRSMSLLLFEHIHGESRDRGQAMVDLVETYRRNGFELDARELPDYLPLLLEFLAHRPGSEAREWLHHIGHIAGMLAARAAERELPHRVLFEILVEAGDGKADLQALRQRASEEVRDDTAEAMDRLWEEEAVRFGAEAPAEDCKPPVRSPARPSHREVQP
>CP027562.1|AVO30715.1|2720949_2721657_-|respiratory-nitrate-reductase-subunit-gamma
MSYSLHQFAFQYYPYIAVAVLLIGSWARYDKAMYTWRTGSSQMLSDKGMRIGSNCFHIGILAILGGHLVGLLTPHAVYEHFITSSQKQMLAMVVGGVFGALCFIGISILLVRRLFNARVRATGSFGDTLVLVLLFAQLCLGLYSIRISSGHLDGGVMVQLAEWAQHIVTFRAGAADYIEGVSWVYKMHIFLGLTLFLIAPFTRLVHVWSIPISYLWRPYQVVRRRQATLRYGPRE
>CP027562.1|AVO30714.1|2720046_2720946_-|rotamase
MGSLPKFLPITVIDSAAPVPAEAHSHHHDAAAQGPRSLGQPAPCRLFVDETAISEADIAREMQHHRAMRPEQSRAEAARALVVRELLRLEAQRLGLQAPDGNRVSDEEVLIQQLLEDAIEDRVPTDEDCRRYFEQNPERFRSPDRVRLRHILLAAPADDVAGRFAARTEGERLVGLLKKSPHLFADFALRHSRCPSSSEGGDLGWLQRGQTTPEFDRQVFRLREGLAGFPVESRWGYHVVCVDAREEGQPQPFEAVLPQLRDYLELQVRQREVQAYLLQLQERYPVRGLDEIEAEADIG
>CP027562.1|AVO30713.1|2718694_2720023_-|MFS-transporter
MNQALAPASAGQQRALWLSTFAFTVCFAVWMIFSIIGIQISEQLGLSDTQFGLLIATPVLTGSVSRVFLGIWSDQFGGRKVMVLVMLCGAVATWMLTYAQTYPQFLFAALCVGIAGGNFSVGVAYVSKFFPASKQGTALGIFGAGNIGSAVTKLLAPLVMVAAGWTMVAKVWAVALAVTAVLFFLFSKEDPSLEQRRREGVKPVPFAEQMAPLKNLQVWRFSLYYFFVFGGFVALALWLPHYLVGAYGMDVGHAGMLAACYSIPASLFRVVGGWMSDRMGARRVMYWTFGVSAICTFLLAYPDTEYVVKGIHGPIHFHLAIGVVMFTVLVFVLGFFMSLGKAAVYKHIPVYYPQHVGAVGGVVGMIGGLGGFILPIVFGALNDAVGIWSSCFMLLFVLVAAALAWMHFAIRRMERRHFPQIDRETDLPEAIDAAAAERVRGR
>CP027562.1|AVO30712.1|2717329_2718544_-|coproporphyrinogen-III-oxidase
MSFHVDESEDTALQAALLRQPRHVLFPPADQFSTGFGESGWRAAVRASNEHLIPRGLTLGFQAGRGGRDVPPQAYLDTLLLALRLQADALAEDREVVAMVLQLGLAETLPPPQLGQLLDAVPQHLRTVARPQVEVRLDAGSALAPAQLRAVGCTRLNVIDRADAPGPTLLAQARQVGFTARYYQLRVPSCEDAGFIERLHEVLAEAPERILLPAPCALPEHASAARWLQSWRLLRAAGYEAIGGDHYQRGDLPNPHGPGDGQRHCDLAGVPRRDRSDYIGLGLSACSQIGEVFYRLEDELGEWRARLQSGHVGVAAGLILSEDERMAAEVAQSIACDHALDAAAFEWRNDVPFDECFAELLPALSPLLARGWAHWDARVLRLAEEGRLLWRMMAACFRPAAAIA
>CP027562.1|AVO30722.1|2730407_2730908_-|molybdopterin-converting-factor-subunit-2-protein
MSEKIIAKVVDRAQSAIDPAEGIAAVSDAGFGGIDVFIGKVRDVNIGRPVTAITYDLFEPLVLNEFKRLAAEVEATFGPKLKLYVAHARGRLGIGDVAVVVAAGSPHRDEAFRACRQLIEAVKHQCPIWKQEHYEDGDSEWSEGCSLCHADNEPAHAHDHAHDHRH
>CP027562.1|AVO30723.1|2730911_2731172_-|molybdopterin-converting-factor
MKQVNLQLFGAFSDLDVSREIAVEVAGGTVADLRQALRELLPVRWPDFRAGLLDYSAFADQQRVLRDHEALPDDGRVAILPPVSGG
>CP027562.1|AVO30724.1|2731171_2732425_-|molybdopterin-molybdenumtransferase-MoeA
MIPYSEALQHLLDAATPLPAERLPLHEAGGRTLASDIVSGQSLPPFDNSAMDGFALLANGATFEAGAEFVVQGWQAAGDAGAEGGEGAWEIMTGARMPVGLDTVVPVENVDVLASEDGRPTHIALKSTVKPGQNVRLRGQDVSDGERVLQAGQVLDINARTLLHAIGVGELAVVARPKAAVIATGKELVTEAAQTLESGQIRDSNRPYLVGRLQAAGAEVVWQGTVGDDVAAFNAVLDEALAAGAQLLISTGAVSAGRYDFVPDALRGRGARIVFHKVAIRPGKPLLFAVLPNGALYFGLPGNPVSAAVGQRFFVEPVLRRLLGLAPEPVLQLPLQADVRTPPGLRFHARARVEVDGQGRLSARVLSGQESFRLMSMLQANAWVVLEAEGDLATAGTPVRVQGWGHHDPVQLASQES
>CP027562.1|AVO30725.1|2732421_2733420_-|bifunctional-molybdenum-cofactor-biosynthesis-protein-MoaC/MoaB
MSGELNAAFHMADVRDKRITRRRAVAVGELHAGPVAYPLIVERRLPKGDALVMAEIAGLQGAKMASMLMPLCHPLPLELVQVFCAPVPERQAIRVWCECASEARTGVEMEALAGVNAALLTLYDLSKPVEPALRIEGIRLLFKEGGKRGVWLHPDGMDDAERARFKPRAPKGLAGAACAVITLSDRASEGTYEDVSGPTLVSGVKKLGGEVVAAEVLPDGIEPLAGRLQALAADGVRLCLCTGGTGLGPRDLTPEALRSLNARPVHGLAQMVRALSAQHTPMAWLSRAEVVQLGNMLVFALPGSPKAAAQCLDILAPVLGHALAMVEGDGHA
>CP027562.1|AVO30726.1|2733428_2734409_-|GTP-3',8-cyclase-MoaA
MSQLTDGFGRSFPYLRLSLTEACNFRCSYCLPDGYQADGRPRFLQVDEIARLVRAFAALGMSKIRLTGGEPSLRKDLDEIIATVAAVPGIRKVAITTNGTLLPRRLPGWHRAGLTALNVSMDSLQRERFRTITGHDRLPEIEQGLALAQALGLPAIKLNAVLLRGLNDDELPQWMDYLRDRPFSVRFIELMRTGDNEAYFQRHHLRADVVIEQLLAAGWHERLRAADAGPAREFGHPDHRGSIGIIAPYSRDFCKGCNRLRVTAKGDLRLCLFGEFGVPLRPLLQRDDDHDALLARITTQLGLKAAGHGLHQGQTGLTPHLASIGG
>CP027562.1|AVO30727.1|2734603_2735008_+|ribonucleotide-reductase-subunit-alpha
MMMNDFQQLLHAAGQQAEPQRLLFVFVRAELPESPTSDQRDRHDRREGGTLSPVLCVDKLPAEVPSFQALATESTTTGIDWDLVFVAALDGRAGFAPNSDEAARPLQLMVNAIHDGQIGRFAAFDRGGEPVQFY
>CP027562.1|AVO30728.1|2735001_2735331_-|hypothetical-protein
MTATASLHPTPDTQGRSRLWSVFWLQGVIPSNILWAVALWALANQRTPLLLGVFAVLLLYTGWIIPAVWRAAPTAHNPNLGVAARGLTVAWGLNTVLVIFFLTLQLVAQ
>CP027562.1|AVO30729.1|2735903_2736281_+|hypothetical-protein
MNESDFPHLHAYRSTAHHDGSPQTAPAVDRNTFIANLNRIGSGAAADGQPWPERHQLPGRCLALADADCALSGLRVVLEMLLAAERTRQNGEPEQYVGDRVMEGLVMACQSLCAQAVGRLQVGEQ
>CP027562.1|AVO30730.1|2736488_2736989_+|hypothetical-protein
MQNFKNALALLVAAGCCAAPDMAHAFQLVREEADVRLVDGAPAICIPKKAKGSFPVANLLLLEYYTLESESWAISLKDDAKPTKLKPGNCISYGSTPDGYERDGPDDNRENFQLKLNTTYYFQATRYISNLWHLRTAIYEATFCLKTEADGALSIHKKSACPDFNR
>CP027562.1|AVO30731.1|2736985_2737801_+|hypothetical-protein
MKLPASATILALLLLSGCGHTPDRELPDRSLSPTTEAGVVDVTIKVPTELEAMEMQVVYRSKTCTFTDYTASGIPYDRDGYQQMDLKPIQREQSRLFEAKVPVNGGGTCNWQLSNITFGAEYKDTTAFGEGIKSGFPAGMIVIFDDNRSPNGSWDFKVDGDLKVVRDYYPWLSESFLGGHRRSISLTTNGHFYLIYQALHARNVYFEPILHSNFLTRSVHPKVKQPGNRTVFHYPDGSSSFETYTSPNHAKLQAIRMAAEAQRQAPADSEG

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Crispr_ID: CP027562_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027562_7

3996199-3996313

Unclear

Consensus_repeat	Method
AGCGTGCCAACCAAGGTTGGCACCTACC	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of CP027562_7

>merge|CP027562|7|3996199-3996313|CRISPRCasFinder
AGCGTGCCAACCAAGGTTGGCACCTACCAGAAAGCGGGAGCGCGGTAGATCCATGCCACGCGTGGATGATTTTTCCCGAGTGTCGAAAGCGTGCCAACCAAGGTTGGCAGCTACC

>CP027562|7|6|3996199-3996313|CRISPRCasFinder
AGCGTGCCAACCAAGGTTGGCACCTACC	AGAAAGCGGGAGCGCGGTAGATCCATGCCACGCGTGGATGATTTTTCCCGAGTGTCGAA
AGCGTGCCAACCAAGGTTGGCAGCTACC

Protein	Signature genes	Signature genes Name	Protein_function
CP027562.1\|AVO31801.1\|3981123_3981768_+\|hypothetical-protein	unknown	unknown	unknown
CP027562.1\|AVO31804.1\|3988861_3989569_-\|pilus-assembly-protein	unknown	unknown	gnl\|CDD\|237939
CP027562.1\|AVO31800.1\|3978591_3981015_+\|peptidase	unknown	unknown	gnl\|CDD\|227342
CP027562.1\|AVO31812.1\|3998283_3999222_-\|nucleoside-hydrolase	unknown	unknown	gnl\|CDD\|239115
CP027562.1\|AVO31819.1\|4006663_4009129_+\|formate-dehydrogenase-N-subunit-alpha	unknown	unknown	gnl\|CDD\|273689
CP027562.1\|AVO31818.1\|4006060_4006651_+\|sulfate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|273689
CP027562.1\|AVO31802.1\|3981923_3982667_-\|hypothetical-protein	unknown	unknown	unknown
CP027562.1\|AVO31805.1\|3989587_3990721_-\|pilin-protein	unknown	unknown	gnl\|CDD\|284778
CP027562.1\|AVO31815.1\|4002425_4004588_-\|guanosine-3',5'-bis(diphosphate)-3'-diphosphatase	unknown	unknown	gnl\|CDD\|223394
CP027562.1\|AVO31807.1\|3993502_3994012_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|367947
CP027562.1\|AVO31817.1\|4005104_4005770_-\|guanylate-kinase	unknown	unknown	gnl\|CDD\|234719
CP027562.1\|AVO31813.1\|3999686_4001798_-\|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236794
CP027562.1\|AVO31816.1\|4004694_4004994_-\|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	gnl\|CDD\|234744
CP027562.1\|AVO31803.1\|3982736_3988802_-\|autotransporter	unknown	unknown	gnl\|CDD\|240612
CP027562.1\|AVO31814.1\|4001805_4002192_-\|RidA-family-protein	unknown	unknown	gnl\|CDD\|129116
CP027562.1\|AVO31810.1\|3996378_3997656_-\|citrate-(Si)-synthase	unknown	unknown	gnl\|CDD\|180164
CP027562.1\|AVO31811.1\|3997952_3998195_-\|50S-ribosomal-protein-L31-type-B	unknown	unknown	gnl\|CDD\|234969
CP027562.1\|AVO31809.1\|3995013_3996087_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
CP027562.1\|AVO31806.1\|3990717_3993450_-\|usher-protein	unknown	unknown	gnl\|CDD\|185210
CP027562.1\|AVO31808.1\|3994350_3994713_-\|stress-induced-protein-YgiW	unknown	unknown	gnl\|CDD\|225653

Protein	Function_ID	Function_description	E-value
CP027562.1\|AVO31817.1\|4005104_4005770_-\|guanylate-kinase	gnl\|CDD\|234719	PRK00300, gmk, guanylate kinase; Provisional.	1.18318e-120
CP027562.1\|AVO31804.1\|3988861_3989569_-\|pilus-assembly-protein	gnl\|CDD\|237939	PRK15308, PRK15308, fimbrial protein TcfA.	1.77807e-45
CP027562.1\|AVO31800.1\|3978591_3981015_+\|peptidase	gnl\|CDD\|227342	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane].	0
CP027562.1\|AVO31812.1\|3998283_3999222_-\|nucleoside-hydrolase	gnl\|CDD\|239115	cd02649, nuc_hydro_CeIAG, nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains eukaryotic, bacterial and archeal proteins similar to the purine-preferring nucleoside hydrolase (IAG-NH) from C. elegans and the salivary purine nucleosidase from Aedes aegypti. C. elegans IAG-NH exhibits a high affinity for the substrate analogue p-nitrophenylriboside (p-NPR). .	4.28105e-119
CP027562.1\|AVO31819.1\|4006663_4009129_+\|formate-dehydrogenase-N-subunit-alpha	gnl\|CDD\|273689	TIGR01553, Formate_dehydrogenase_major_subunit, formate dehydrogenase-N alpha subunit. This model describes a subset of formate dehydrogenase alpha chains found mainly in proteobacteria but also in Aquifex. The alpha chain contains domains for molybdopterin dinucleotide binding and molybdopterin oxidoreductase (pfam01568 and pfam00384, respectively). The holo-enzyme also contains beta and gamma subunits of 32 and 20 kDa. The enzyme catalyzes the oxidation of formate (produced from pyruvate during anaerobic growth) to carbon dioxide with the concomitant release of two electrons and two protons. The electrons are utilized mainly in the nitrate respiration by nitrate reductase. In E. coli and Salmonella, there are two forms of the formate dehydrogenase, one induced by nitrate which is strictly anaerobic (fdn), and one incuced during the transition from aerobic to anaerobic growth (fdo). This subunit is one of only three proteins in E. coli which contain selenocysteine. This model is well-defined, with a large, unpopulated trusted/noise gap. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	0
CP027562.1\|AVO31818.1\|4006060_4006651_+\|sulfate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|273689	TIGR01553, Formate_dehydrogenase_major_subunit, formate dehydrogenase-N alpha subunit. This model describes a subset of formate dehydrogenase alpha chains found mainly in proteobacteria but also in Aquifex. The alpha chain contains domains for molybdopterin dinucleotide binding and molybdopterin oxidoreductase (pfam01568 and pfam00384, respectively). The holo-enzyme also contains beta and gamma subunits of 32 and 20 kDa. The enzyme catalyzes the oxidation of formate (produced from pyruvate during anaerobic growth) to carbon dioxide with the concomitant release of two electrons and two protons. The electrons are utilized mainly in the nitrate respiration by nitrate reductase. In E. coli and Salmonella, there are two forms of the formate dehydrogenase, one induced by nitrate which is strictly anaerobic (fdn), and one incuced during the transition from aerobic to anaerobic growth (fdo). This subunit is one of only three proteins in E. coli which contain selenocysteine. This model is well-defined, with a large, unpopulated trusted/noise gap. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	7.53098e-85
CP027562.1\|AVO31815.1\|4002425_4004588_-\|guanosine-3',5'-bis(diphosphate)-3'-diphosphatase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
CP027562.1\|AVO31805.1\|3989587_3990721_-\|pilin-protein	gnl\|CDD\|284778	pfam07434, CblD, CblD like pilus biogenesis initiator. This family consists of several minor pilin proteins including CblD from Burkholderia cepacia which is known to CblD be the initiator of pilus biogenesis. The family also contains a variety of Enterobacterial minor pilin proteins.	2.21568e-51
CP027562.1\|AVO31807.1\|3993502_3994012_-\|fimbrial-protein	gnl\|CDD\|367947	pfam04449, Fimbrial_CS1, CS1 type fimbrial major subunit. Fimbriae, also known as pili, form filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometres. They enable the cell to colonise host epithelia. This family constitutes the major subunits of CS1 like pili, including CS2 and CFA1 from Escherichia coli, and also the Cable type II pilin major subunit from Burkholderia cepacia. The major subunit of CS1 pili is called CooA. Periplasmic CooA is mostly complexed with the assembly protein CooB. In addition, a small pool of CooA multimers, and CooA-CooD complexes exists, but the functional significance is unknown. A member of this family has also been identified in Salmonella typhi and Salmonella enterica.	9.84765e-21
CP027562.1\|AVO31813.1\|3999686_4001798_-\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
CP027562.1\|AVO31816.1\|4004694_4004994_-\|DNA-directed-RNA-polymerase-subunit-omega	gnl\|CDD\|234744	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed.	1.39874e-21
CP027562.1\|AVO31803.1\|3982736_3988802_-\|autotransporter	gnl\|CDD\|240612	cd12820, LbR_YadA-like, YadA-like, left-handed beta-roll. This group contains the collagen-binding domain virulence factor YadA an adhesion proteins of several Yersinia species, and related cell surface proteins, including Moraxella catarrhalis UspA-like proteins. The collagen-binding portion is found in the hydrophobic N-terminal region. YadA forms a matrix on the bacterial outer membrane, which mediates binding to collagen and epithelial cells. YadA inhibits the complement-activating pathway with the coating of the cell surface with factor H, which impedes C3b molecules. These domains form a left handed beta roll made up of a series of short repeated elements. UspA1 and UspA2 are part of a class of pathogenicity factors that act as cell surface adhesion molecules, in which N-terminal head and neck domains extend from the bacterial outer membrane. The UspA1 head domain of Moraxella catarrhalis, is formed from trimeric left-handed parallel beta-helices of 14-16 amino acid repeats. The UspA1 head domain connects to a neck region of large extended, charged loops that maybe be ligand binding, which is in turn connected to an extended coiled coil domain that tethers the head and neck region to the cell surface via a transmembrane region.	2.55528e-20
CP027562.1\|AVO31814.1\|4001805_4002192_-\|RidA-family-protein	gnl\|CDD\|129116	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase. This protein was described initially as an inhibitor of protein synthesis intiation, then as an endoribonuclease active on single-stranded mRNA, endoribonuclease L-PSP. Members of this family, conserved in all domains of life and often with several members per bacterial genome, appear to catalyze a reaction that minimizes toxic by-products from reactions catalyzed by pyridoxal phosphate-dependent enzymes. [Cellular processes, Other].	3.09769e-58
CP027562.1\|AVO31810.1\|3996378_3997656_-\|citrate-(Si)-synthase	gnl\|CDD\|180164	PRK05614, gltA, citrate synthase.	0
CP027562.1\|AVO31811.1\|3997952_3998195_-\|50S-ribosomal-protein-L31-type-B	gnl\|CDD\|234969	PRK01678, rpmE2, type B 50S ribosomal protein L31.	5.64613e-50
CP027562.1\|AVO31809.1\|3995013_3996087_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	5.43959e-05
CP027562.1\|AVO31806.1\|3990717_3993450_-\|usher-protein	gnl\|CDD\|185210	PRK15310, PRK15310, fimbrial outer membrane usher protein TcfC; Provisional.	1.87143e-180
CP027562.1\|AVO31808.1\|3994350_3994713_-\|stress-induced-protein-YgiW	gnl\|CDD\|225653	COG3111, COG3111, Periplasmic protein with OB-fold [Function unknown].	1.98454e-25

>CP027562.1|AVO31809.1|3995013_3996087_-|hypothetical-protein
MSTRFDPPERGPLGPDLVTVAAAPIVAAPPGESAVSWGAIFAGAAAAAALSLILLILGVGLGLSSVSPWSFEGVSKETFGWSSIIWLTFTALAASGLGGYLAGRLRTKWTQIHGDETYFRDTAHGFVSWAVATLLTAGLLTSAIGGVLGTGAKVAGATAGAAASTAGVAAAGAGSAAAAAPEGDLNYWVDSLFRSATGAGPSDPAAPPPPGAPMDPNAAPPPPAASVGPRDARMAPPPRPMPGNGPMGDRREVRAEVNRIIVNSLQGDGLDPADTQYLSQLIARETGMSQAEAQTRVTDVQTRMRAALEKAKNTARQAADDARKAAAYAALWLFITLLIGAFFASLSATWGGRRRDL
>CP027562.1|AVO31808.1|3994350_3994713_-|stress-induced-protein-YgiW
MNRLLAIALIATPLALLSPQASAQYTGPGAGTAASTVADARAQRDDHPVVLRGALVAKLGHERYQFRDASGQIEVEIDDDDLPPQAIGADTVVELHGKVDTHRFKPTDIDVDRVTVVPAG
>CP027562.1|AVO31807.1|3993502_3994012_-|fimbrial-protein
MHAILKKAALAAALATASLSAHAVETKISVYADVDPTLALLRDDGSALPDAVTLTHDPLRGLVPSTQHVRIHSNDEAADIEAKIGSAFVLANGDGKVTVPMTVSLNNRALAVTPIEFKAADLFTGAGSTPGASISMPLVIAQTTPAPIATKGAYTGIVNIVLNQKATTP
>CP027562.1|AVO31806.1|3990717_3993450_-|usher-protein
MTSHAPAITRLAVALALALSTPLVAARGVPPGFEDLVEGQTEQLDIQLFGRSAGLSPVRVTLEHVQLEDPASVLQALDLPAEAQAALLPALSQPMPRNSHLACRFGGATAGCGYLDPPEDPAAVRALYDEGEGAVRLFVARRWIPGKPAAERFHTVSANAENAFLHQQVINVSGSRDYQTLSARGTGVLGLFDRGHVSAEWNFNQQRYRSRGSDTEFQFDNVYYRHDLGQAHYLQAGRMDRRNLSSPQGGTFSFSMLPLDRLQGLRVGTTQAYVDADAAVQATPLTVLLARDARVDAYDGTRLLQTSYLQAGINQIDTRNFPFGNYTITLRIYEDGVLVRSEDAPFDKGGDWTNSQWQWFVQGGKRNERRSDRFDGERVAVAGMRVPLGRDVAMVAGVADLGGFRYGELRVDLRRLYATQELRASFGGMRGSDGSTGQQHQLSYRRTASWNIYQQRMRGKACQFEADARDQLGCTNSLSASMALPLAGGSAYVGYTRRQTWRAGRILPGAEDDPLAGLDPLLPPPPPWQPHREPQLSRTWQASFSRSHRWQDFSVSTRVGVWQQRASDSLRGSDQRDRGIYFNLSLTRLLRGTAGSGQRRYSVDVRQPQHQRPDINYSIGHSLRQDVDAQYRELSAELRANNSDRYSATLSGQLQNSLGQSGATLAHYQQRGRSETAYSGMHSSGFALGKRGFYWSGSNGADAGLAVQVADTDDVDLRGVAAELQVGGLRRQRLQIGERRLLPLSSYQSHRAEVQDASTLDSIAAIRVTGVGGARPMFLSPGRLMRMPVPIEVTYTFIGNAKDLAGAPLGGARILNAPVPGTSANGGFVADFPRRETTLYLLQDDRLLHCPLQVRERRQVVLLVGAVHCEPLAVAQLPPQIRQQARVTRLLQERALIAATPQTAAAGGTP
>CP027562.1|AVO31805.1|3989587_3990721_-|pilin-protein
MSRRVLLVLMLVCALVVLAPRAWAQWPPETHPANQSRDIVMSWDRSAVPGDVELWAPRTVLGFSHDLAMKYGQIHVVCGSASDSEFGKCPVDGEPEASVGISDVALLFVEQRTGLHSELRAQGYLQRVMSDWACFSDYWDLSRRRLNASYWFKCDSSQPAGTGAALELPSAELSKLVAGHWKATMRLNIKADPAAAPVATATFNFDFTVTDYDAISIYFPGFDGVAPLVNMDLRYDPIRKVVAGRKEVDMCLYDGVGSQSEFLGVTVRDSGPRPPPGREFAVWHQDGGSDDTQRLDYQVGLNYGGNLLAMKHGEEQLLRGIDSAQLRMVLLPGISQPVYCVPTPLTLETPPTPIASKRPGLYEGELTVELRVPTAKP
>CP027562.1|AVO31804.1|3988861_3989569_-|pilus-assembly-protein
MKKLLFCLLPLSALLAPPAQANLSIHPMRAAVDAKHGTKIRVYSQSTQPQYVQARLLRISNPAQVGEEEIEVEAADAAIAITPGKFALSGGGNRLIRVIPLQTVEKEAAYRIYFEGVKGPDDTILEGDEQAAQANVGVSLVWGALVNVVPAKGSVNLKLQGNTLRNTGTLRVGITGAAECSAGGVCTPLELSRSLYPDAALTLPFQLQPGSTLQLQYRLSNDGYRDHVTTLAPSA
>CP027562.1|AVO31803.1|3982736_3988802_-|autotransporter
MNHIYRRIWSKAKRCWVVASEITPGEGRKSRCVTVGVGQARSGFVLLAAVAACTAHAGPMGPCSDGSIDDLQCEFDGNEMLASSSSLASRWVFPMSAGTRAVGQWSTVFGDAADAPGRYSGAFGYGAKVQGDNSAAFGYTTNVSGEKSAAFGPRARIEGILSAAMGYGATAKGGHASAFGAAALADGVGTVAVGHDSRAYALNSIAIGSGSRTLASGGGSSIAIGGNSSAGSVGSIGAIAVGAETRASSDAVAIGYGAKAYATSSVALGIGSQTVDANTVSVGSASVKRRIVNVQPGSLISGSTDAVTGDQLYNTNQHVISVRTIANTAKTNADTALGKANLLEGLLSQASGSGNIRVGGGNSGNLIDVRNSAIANRKITGVADATLSTTSTDAVTGKQLNATNTKLGVVEKTADAAKVDVAAVRVIAQAAANRIDASILALGKGATAENGSYGISTALGNNAKAYNGRSVALGDDARAGVDADGNKVANQNAGVSIGAGTRSANGAVATGFRANASGNFSIAVGGDAKAEAEHATAVGNLSKASASQATALGRGSEATAQYASALGNLAKATKTGSVALGDRAQASHENAVALGAGAVTASANSVSVGSASRKRKIQYIADGVVGAGSTDAITGNQLHVTNQAVTKAQTAADGATTTANAAKVESGNALAETVALGGLVNQAAVNGSVRLGEKNSGTQLDVRNSANANRRIMGVADGAISATSNEAVTGKQLHETNANVNSAQTTASAAKDRADTALADTGVLKGLVGQAAANGNVRVGEKNSGTMLDIRNSANANRKLTGVADGAVSASSDEAINGRQLNATNEKVATVEGIARSAGTEAGVAKGDAAKALAETAVLGGLVAQVSASGNVRLGEKNSGTTLDVRNSANAERKISGVADGLLSASSAEAVSGKQLYSSNSRISVLEDASQFMSIGVAPTSERAEAGLAGVAVGNSAKTGSDGGTAVGTLAKALGRNSVTIGRASVVHEGSDSGFALGAGAEVGIAGGGARGGVAIGAGAKVGKGANGSLAIGEGSQANEAGVASFGSATTFRRLVNVARGTADHNATTVSQLKDSLATLGGGAGMDANGNIIAPTYTVQGGTQSTVEDALTALDGAVVTAGRRADKVEGQLSSIFQDSPSARADGTSQIALNGVNGMVLTNLADGRVAPGSRDAVTGNQLYAAEQKISQNRSDLEAMRKEREMGQQAMRGLDASIIDYGGARLTGVAEGKLSADSSDVVRGSQLYETNSRISELEGDAQFISIGSAPFSERAAAGVAGVAVGNSAKTGLEGGTAVGTFAEAMGKNSTAIGRAATVSVDSANGFAMGVGAQVGGGAGGANEGIAIGAGARVGSGAHGSLALGNGSQADEEGVASFGGVGIQRRLVNIARGTADHNATTVSQLNDSLATLGGGAGMDPNGNITAPAYTVQGGTQNNVEDALMALDGAVITAGRRADKVEGQLNSIFQDSPSARADGMSQIALNGVNGMVLTNLADGRVAPGSRDAVTGNQLYAAEQKISQNRNDLEAMRKEREMGQQTMRGLDANGPIDFGGARLTGVADGSISADSRDVVTGRQLFGVDDRVSKIENQRRFFKVDVDQQSQDAVAGFLGVAIGDSARTREEGGTAVGAFSSALARNSVALGRGSTVEEPAMEGFAVGVGARVSARNGIAIGTNSSIGINAAGSISIGASSEATESSTVSFGNSVNKRRLVNIANGTADHNAATVGQLRGALSTLGGEVDANGNIVGPRFNVQGQTQSTLNGALEALDGAVVANTSRVDKVETQLRSVFQGTPSVRADGVNQLTLAGANGMVIANVANGLIAAGSRDAVNGGQLHSMQQQLNGRMDGLEQRIDDAPAPRALASSSVPKPQAEESPVVPEGKDSQQVASVGERDKPTPQPKANKDDSPKPQVDTAELEKMLARANEYTDGAISNFERRLDKMDKRFNRMAAMSSAQSAMAMNTAGLATYNRLGAGVGYSEGESAMAVGYQRVLNEKGSATFSLNGAFTNSGERSMGVGVGIGW
>CP027562.1|AVO31802.1|3981923_3982667_-|hypothetical-protein
MYGWVSRFISYRTFYLWRARYFYYTRNLDSWVLFTLLCLTGMVLVLWYHWRVVSIPPPRVHPDVAALRVENITGEAIHRIVLAQHGGTTPGEPFTTPEEVRAGTLRTMRVRELLDSAMVWQLKAHMLADMASYIDATGSCFPYPCWQLKHRLSLLRAAQAENTAINEALAPVLEVPLDRMPNLNGGERARIQTAWSDAFGDVYNQTWLLADLQDMHARMMVEYPRRAGAPWLARLLTGDAKEPHELR
>CP027562.1|AVO31801.1|3981123_3981768_+|hypothetical-protein
MHRARQHAASQTRERRHRLAHEAARLMAEGGIRDYHQAKLKAASRLGIHDDASLPRNTEIEDALREYQRLFSGPQHGNELQRRREAAMRALEFLHGFAPRLAGPVLDGTADANSPVQLHLHSDDPEAVHRFLDEHGIPAESRTRRLRMDRERCLDVPVWVFSAEELTFDLAVLPYDALRQAPLSPVDEKPMRRASVAQLRQVLAEAEITAYIGG
>CP027562.1|AVO31800.1|3978591_3981015_+|peptidase
MTRLRRWLRWIFLIVLVLALIGAAAVGGLYYAVSSKLPDVQTLRDVEMQEPMYVYAADGKLMAVFGETRRTPVTMKDVPERLKQAFLATEDARFYEHGGVDYMGIGRAVWLLATTNDKRVPGGSTITQQVARQFFLSSEYSYTRKLAEILLARKIESELSKDEIFELYLNKSFFGNRAYGVAAAAEFYYGKKLNELDLDEMASLAGIPKFPSSGNPISNPERARQRRDNYVLQRMADLKFVSQAEADAAKAVPMHASPHEPPVEVYAPYVAELVRQEMIARFGGDVVNKGYHVTTTIDATLQESANLAVRDGLLLYDHRHGWHGVEKQVQLGAGDDAAALAEHLRGMFGQAGLLPAIVASTGADGSATVVLANRSEIVLPAGAAKWTNKTPGKLVQRGDIVRVRAGAKEGEWLLDQIPRGQSALVSLDAHNGALKALVGGFSFSGNKFNRATQARRQPGSSFKPFVYAAAFDKGYNPASIVLDAPVVFRDRRGKTWAPQNDGGGFRGPMRLREALVQSRNLVSVRLLDGMGVDYARKYISEFGFAESELPPNLSMSLGTASLTPLSVARGYAVFANGGSRVDTWLIDQVNDRDGNLVFKENPALACRDCAGSSGQPVNQVVDGFNFGAPAPKVDPAAAATAEAKTETPAAPVNPDARTAPRAIDARTAYQLVSMMRDVVQRGTGAQAKVLGREDVGGKTGSTNDHRDAWFSGFGGPYVTTVWVGRDDFRSLGYREYGGKAALPIWIDYMRTALKDTPIAQNEPPSGMVQATLNGATEWVKVEDMDRLTDYDLNLNTPQADAAAFDIF
>CP027562.1|AVO31810.1|3996378_3997656_-|citrate-(Si)-synthase
MSDLDQVTLNAGDKSVVLPVIKPTLGNDCVDIAKLTKETGYFTYDSGFTATASCKSAITYIDGDKGVLLYRGYPIEQLSEKSSYVEVAYLLINGERPSAEQLKAFTDELAAEANVDDSINTLIGSFAKDAHPMAILTAAIAQLSGIYHASLDLSDAEQRRQAAVRLIAKVPTLSALIYRHGKGLPANKPDTSLDYVSRFLKQTFESADGQYDLNPDVVKALDLLFILHADHEQNASTSTVRLVGSTGANPYASVAAGVTALWGPAHGGANEAVLKMLEEIGSADNVESAVVKAKDKTSGFRLMGFGHRVYKNFDPRAKVIGEMTSKVLKQLGVQDPLLDVAVKLEQAALQDEYFVARKLYPNVDFYSGIIYKALQIPTEMFTVMFALGRTSGWVSHWLEQQVDPEMKIGRPRQVYTGSDVRDYQG
>CP027562.1|AVO31811.1|3997952_3998195_-|50S-ribosomal-protein-L31-type-B
MKADIHPNYRDVVFHDVTSDFKILTRSTMATKETIKWEDGNDYPLVKVEISSASHPFYTGKHKVIDTSGRIDKFQKRYAR
>CP027562.1|AVO31812.1|3998283_3999222_-|nucleoside-hydrolase
MTHKIPLLIDTDPGVDDALALLMAFADERHDVVALTIAAGNVGLQYTVRNALKLCDIVGRADVPVFAGSPDPLLHPSVDAAHVHGRDGYGDVDLPPPSRQAEAEHAALAILRLSHEHAGELMLVMLGPLTNLALALKLDPTLPERIKRIVVMGGAVTCHGNITPAAEFNIAFDPEAAHVVFTSFKHLLVSDWEATVAHGLPLQDAEKWLQADSDRARFYELISRKTRGLSEDSKGGRWYTADAVAMAWALNPEGQLQVESRPLNVELNGTFSRGATIVDWNRQTGQPDNCDLLMAYDQQRFEALVRQALGAD
>CP027562.1|AVO31813.1|3999686_4001798_-|ATP-dependent-DNA-helicase-RecG
MARKAAVTPVLSPSGEASLAMLAGVGPAVAAKLQARGLATLQDLWLHLPLRYEDRTRLTRIEDLRNGVPAQVEVRVVAVERGMRYRPMLKVAVEDEGQGTLVLRFFHFRQQQVGQFAVGNRLRCFGTPKPGHLGLEIVHPSYQVLGRNDDPELGDRLDPVYPTVEGVGPMTMRKLIGQALDRLPEESTLELLPSGWLDGLGLPSLRSALLTVHRPPPDADLAALAAGTHPAQRRLAMEELLAHHLSLRRQRIALQAHHAPPLAGPGKLAKALLKQLPFALTGAQARVFKQIREDLARPSPMLRLVQGDVGSGKTVVAALAAMLAVEQGKQVALAAPTELLAEQHLNNLRGWLEPLGVRIAWLAGKVTGKARAKVMEQVANGEAQVVVGTHALMQEAVVFQDLALAIVDEQHRFGVHQRLALRDKGAGGNSVPHQLVMTATPIPRTLAMSEYADLDVSAIDELPPGRTPVQTVALNNDRRPELIERIALACQEGRQVYWVCTLIEESEELDATPAQATYESLQALLPGVRVGLVHGRLKAAEKLATMVAFKTGEIDLLVATTVIEVGVDVPNASLMVIENAERLGLAQLHQLRGRVGRGSAVSRCVLLYQAPLSQMARERLQTMRETNDGFVIAEKDLELRGPGELLGTRQTGLAGFRIADLARDAGLLPGVHDLAERLLDQQPALADRVVQRWIGTAVRYASA
>CP027562.1|AVO31814.1|4001805_4002192_-|RidA-family-protein
MSRQIINTEKAPAAIGPYSQAVRAGNTVYFSGQIPLDPATGDIVGAGDVEAQARRAFDNLKAVAEAAGGSLDKVVRLGLYLTDLSEFAKVNAVMQDYFQAPYPARSTIEVSGLPKGANFEVDAVMVID
>CP027562.1|AVO31815.1|4002425_4004588_-|guanosine-3',5'-bis(diphosphate)-3'-diphosphatase
MNPGPTAKVAAAPAAAVPDYVLQLERAAHYLPPEQLPLLRRAWEVGAAAHAGQTRKSGEPYITHPVAVAQVLAELGLDVEALIAAILHDTIEDTPLTREALAAEFGEAVAELVDGVTKLDKLKFRDRQEAAAESFRKMLLAMSRDLRVIMIKLADRLHNMRTLGAQSREARGRIARETLEIYAPIAQRLGMSLVKSELQNLGFKALYPWRHAILEKHIRSQPVVRREALAQVEVQLSQRLAKEGIEHRLVSRIKTPWSIYNKMRDENKTFDQVMDVFGFRLVVRSVPSCYHALGSVHATFKPLDGRFRDFIAIPKANGYQSLHTVLFGPYGSPIEVQIRTEEMDLIAERGVAAHWTYKFGGDSPNSAQSRAHAWIVELIDSQRAAGSSLEFLDNVKVDLFPDEVYLFTPKGKILALPRNSTALDFAYAVHTDVGNMAVASRVDKKLVPLRTKLVSGQSVEIITARSATPKPQWLEFVVTSKARTAIRHQLKQLEHEDAVQLGHRMLDRALEAMDSSLERLPKGRLDAFLAEHRFPRLEALLAEVALGNWMPTQAAQALMAYAELRGGPHSRHHSQEKILINGSERGVVTFAGCCQPIPGDEIMGYHTAGKGIVVHRMDCPNLAELRKSPERWVPIGWDTTVSGDYDTSLVVEVENGTGVLAQLAAAIAQSHSNIERVDYLDRDFNAAVLAFNIQVRDRNHLAEVMRRLRRLSVVQSVRRQ
>CP027562.1|AVO31816.1|4004694_4004994_-|DNA-directed-RNA-polymerase-subunit-omega
MARITVEDCLEVVNNRFELVMMASKRARQLANGVQATLDNSETEDKPTVLALREIAARKIDNALIDEVEKAERERAEREALEWAAAEVVADEDMSKNDD
>CP027562.1|AVO31817.1|4005104_4005770_-|guanylate-kinase
MSAPSKPSDAVARGTLYIVAAPSGAGKSSIVNATLARDPQIALSISFTSRAMRPGEVNGQHYHFVSAEKFEEMIAAGDFFEHAWVHGDWKGTARQSVEPQLAAGQDVLLEIDWQGAQQVRQLVPGTVTVFILPPSKQALQDRMRKRGQDSEAVIAQRLGAARDEMLHFNEFDYVIVNEVFDTAVDELCAIFTASRLRREAQKVRHAGLIQALLTPDPGATD
>CP027562.1|AVO31818.1|4006060_4006651_+|sulfate-ABC-transporter-substrate-binding-protein
MPSMSRRQFLKVTGTTLVGSSLALMGFAPGIALAEVRQYKLTRATETRNTCTYCSVACGILMYSLGDGAKNAEPSIFHIEGDPDHPVNRGTLCPKGAGLADIIHSKSRLLYPEYRAPGSNEWKRLSWDDALDRIARLMKEDRDANFVQKNEAGQTVNRWLTTGMLAASATSNETAVLTHKVVRSLGMLAFDNQARV
>CP027562.1|AVO31819.1|4006663_4009129_+|formate-dehydrogenase-N-subunit-alpha
MAGLAPTLGRGAMTNHWVDIKNADLILIMGGNAAEAHPCGFKWVTEAKAHNKARLIVVDPRFNRSAAVADVYAPIRTGTDIVFLGGLINYLLTEDRIQHEYVLNYTDMSFLVKDEFAFKDGLYSGYNEEKRSYDRSSWDYAYGDDGFVRSDPTLKDPRCVYTLLKQHYARYTVEMVERICGTPADSIRQVWEMIASTAGKDKAMTILYALGWTQHSVGAQNVRAGTMVQLLLGNIGVAGGGMNALRGHSNIQGLTDIGLMSDLLPGYLTLPKQDEQDYDAYIAKRTQKPLRANQMSFWQNYPKFHVSLMKSWWGDAATADNNWCFDHLPKLDKPYDMLQAYELMNEGKIHGYICQGFNPLASAPNKGKLISAFSKLKFMISMDPLETETIAFWQNHGALNDVDPSTIQTEVFRLPTTSFAEENGAVVNSSRWLQWHWKGANPPGEARSDIEIMSELFHRIKALYEKDGGAWWEPVRDLAWKYSNPELPTPEELAMEYNGKALADVFDPKDPTKLVRKAGEQLAAFGDLRDDGSTSSGCWIYIGAWGPTGNMMARRDNSDPTGIGNTLGWAWAWPANRRVMYNRASCDVAGQPFDPRRTLLAWNGKNWGSVDVPDFKADEDPAGGMGPFIMNPEGIARFFAKAGMAEGPFPEHYEPFDTPLRSNPLSPGQALTLNNPAARVFASDRAQIGSPDEFPHVATTYRLTEHFHFWTKHGKLNAIIQPEQFVEIGAALADELGINNGSRVRVSSKRGHIEAVAMVTKRIKALQIDGRTVHQVGVPIHWGFLGAAKPGYIANTLTNAIGDGNSQTPESKCILVKVEKV

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Crispr_ID: CP027562_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027562_8

4089718-4089814

Orphan

Consensus_repeat	Method
GCAGTAGATCCACGCCATGCGTGGATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027562_8

>merge|CP027562|8|4089718-4089814|CRISPRCasFinder
GCAGTAGATCCACGCCATGCGTGGATGCATGCATCAGTGCCAACCAAGGTTGGCACCCACCAGGCCCACCGCAGTAGATCCACACCATGCGTGGATG

>CP027562|8|7|4089718-4089814|CRISPRCasFinder
GCAGTAGATCCACGCCATGCGTGGATG	CATGCATCAGTGCCAACCAAGGTTGGCACCCACCAGGCCCACC
GCAGTAGATCCACACCATGCGTGGATG

Protein	Signature genes	Signature genes Name	Protein_function
CP027562.1\|AVO31894.1\|4098645_4099944_-\|3-deoxy-D-manno-octulosonic-acid-transferase	unknown	unknown	gnl\|CDD\|235589
CP027562.1\|AVO31891.1\|4095121_4095769_+\|protein-L-isoaspartate-O-methyltransferase	unknown	unknown	gnl\|CDD\|225316
CP027562.1\|AVO31880.1\|4081070_4082162_+\|serine/threonine-dehydratase	unknown	unknown	gnl\|CDD\|236339
CP027562.1\|AVO31883.1\|4084595_4086014_+\|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl\|CDD\|235490
CP027562.1\|AVO31889.1\|4093053_4094181_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
CP027562.1\|AVO31879.1\|4080722_4080974_+\|acetolactate-synthase	unknown	unknown	gnl\|CDD\|226486
CP027562.1\|AVO31884.1\|4086013_4086592_+\|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl\|CDD\|179314
CP027562.1\|AVO31888.1\|4089888_4093050_-\|multidrug-transporter-AcrB	unknown	unknown	gnl\|CDD\|223911
CP027562.1\|AVO31885.1\|4086581_4087643_+\|3-isopropylmalate-dehydrogenase	unknown	unknown	gnl\|CDD\|234832
CP027562.1\|AVO31890.1\|4094304_4094985_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379522
CP027562.1\|AVO31895.1\|4100004_4100922_+\|lipid-A-biosynthesis-lauroyl-acyltransferase	unknown	unknown	gnl\|CDD\|181542
CP027562.1\|AVO31897.1\|4101617_4102949_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225844
CP027562.1\|AVO31893.1\|4097212_4098430_-\|amino-acid-transporter	unknown	unknown	gnl\|CDD\|129987
CP027562.1\|AVO31882.1\|4083755_4084535_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
CP027562.1\|AVO31892.1\|4095785_4097144_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273829
CP027562.1\|AVO31877.1\|4077989_4078964_+\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235491
CP027562.1\|AVO31896.1\|4100964_4101414_-\|transposase	unknown	unknown	gnl\|CDD\|376616
CP027562.1\|AVO31881.1\|4082158_4083745_+\|2-isopropylmalate-synthase	unknown	unknown	gnl\|CDD\|234864
CP027562.1\|AVO31886.1\|4087927_4088701_-\|short-chain-dehydrogenase	unknown	unknown	gnl\|CDD\|183716
CP027562.1\|AVO31878.1\|4079002_4080739_+\|acetolactate-synthase-2-catalytic-subunit	unknown	unknown	gnl\|CDD\|181601

Protein	Function_ID	Function_description	E-value
CP027562.1\|AVO31894.1\|4098645_4099944_-\|3-deoxy-D-manno-octulosonic-acid-transferase	gnl\|CDD\|235589	PRK05749, PRK05749, 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed.	0
CP027562.1\|AVO31891.1\|4095121_4095769_+\|protein-L-isoaspartate-O-methyltransferase	gnl\|CDD\|225316	COG2518, Pcm, Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones].	1.25391e-64
CP027562.1\|AVO31880.1\|4081070_4082162_+\|serine/threonine-dehydratase	gnl\|CDD\|236339	PRK08813, PRK08813, threonine dehydratase; Provisional.	0
CP027562.1\|AVO31883.1\|4084595_4086014_+\|3-isopropylmalate-dehydratase-large-subunit	gnl\|CDD\|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
CP027562.1\|AVO31889.1\|4093053_4094181_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.51377e-60
CP027562.1\|AVO31879.1\|4080722_4080974_+\|acetolactate-synthase	gnl\|CDD\|226486	COG3978, COG3978, Acetolactate synthase (isozyme II), small (regulatory) subunit [Function unknown].	2.29252e-22
CP027562.1\|AVO31884.1\|4086013_4086592_+\|3-isopropylmalate-dehydratase-small-subunit	gnl\|CDD\|179314	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit.	2.29255e-92
CP027562.1\|AVO31888.1\|4089888_4093050_-\|multidrug-transporter-AcrB	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
CP027562.1\|AVO31885.1\|4086581_4087643_+\|3-isopropylmalate-dehydrogenase	gnl\|CDD\|234832	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional.	0
CP027562.1\|AVO31890.1\|4094304_4094985_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|379522	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region. This family comprises the C-terminal domain of transcriptional regulators of the TetR family. It includes the AefR transcriptional regulator from P. syringae. It is found in association with pfam00440.	1.1593e-25
CP027562.1\|AVO31895.1\|4100004_4100922_+\|lipid-A-biosynthesis-lauroyl-acyltransferase	gnl\|CDD\|181542	PRK08733, PRK08733, LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase.	0
CP027562.1\|AVO31897.1\|4101617_4102949_-\|hypothetical-protein	gnl\|CDD\|225844	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane].	5.08331e-18
CP027562.1\|AVO31893.1\|4097212_4098430_-\|amino-acid-transporter	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	4.3365e-06
CP027562.1\|AVO31882.1\|4083755_4084535_+\|SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.03757e-22
CP027562.1\|AVO31892.1\|4095785_4097144_+\|hypothetical-protein	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	4.94128e-107
CP027562.1\|AVO31877.1\|4077989_4078964_+\|ketol-acid-reductoisomerase	gnl\|CDD\|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
CP027562.1\|AVO31896.1\|4100964_4101414_-\|transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	1.75602e-09
CP027562.1\|AVO31881.1\|4082158_4083745_+\|2-isopropylmalate-synthase	gnl\|CDD\|234864	PRK00915, PRK00915, 2-isopropylmalate synthase; Validated.	0
CP027562.1\|AVO31886.1\|4087927_4088701_-\|short-chain-dehydrogenase	gnl\|CDD\|183716	PRK12744, PRK12744, SDR family oxidoreductase.	4.6434e-175
CP027562.1\|AVO31878.1\|4079002_4080739_+\|acetolactate-synthase-2-catalytic-subunit	gnl\|CDD\|181601	PRK08978, PRK08978, acetolactate synthase 2 catalytic subunit; Reviewed.	0

>CP027562.1|AVO31886.1|4087927_4088701_-|short-chain-dehydrogenase
MTDHSLKGKTVLIAGGAKNLGGLLARDFASQGAKAIVIHYNSAATQADAEATVASVQAAGSKAVALQGDLTSAAAMERLFADAVAAVGRPDIAINTVGKVLKKPLLEISEAEYDEMSAVNAKTAFFFLKEAGRNINDGGRICTLVTSLLGAFTPFYSSYAGTKAPVEHFTRAASKEFGERGISVTAIGPGPMDTPFFYPAESADAQAYHKTAAALSAFTRTGLTDIADIVPWIRFLVTDGWWMTGQTILVNGGYTTK
>CP027562.1|AVO31885.1|4086581_4087643_+|3-isopropylmalate-dehydrogenase
MHAEIVVLPGDGIGPEVAAAAVAVLKAVAERFNHTFTFSEHDIGGVAIDRHGEPLPASTLEACKAANAVLLGAVGGPKWSDPNAKVRPEQGLLAIRKALGLYANLRPVRTHEAALHASPIKAELLQGVDFVVVRELTGGIYFGDKTRDADSASDLCRYTVAEIERVLRSAFRLAQQRRGKVTSVDKANVLETSRLWRDVAARIGREEFPDVALEHQLVDSMAMHLLAKPREYDVIVTENMFGDILTDEASMLAGSLGLLPSASLGEPGAVGIYEPIHGSAPDIAGKGIANPYATIFSAAMLLRHSLGLEAEAAAVEAAVHAVLDDGVFTADLAAKGQAVSTAAATDAVLAKLN
>CP027562.1|AVO31884.1|4086013_4086592_+|3-isopropylmalate-dehydratase-small-subunit
MAGFRTLTSASVVLRQTNIDTDQIIPARFLSTTERAGLGRNAFNDWRWQADGSPVADFAFNQPHNAGRSILLAGRNFGCGSSREHAPWALTDLGLRAIVSSEIADIFRGNALKNGLLPIVLDEADVQTLMQRSDDELTIDVAARELRTPDGRVYSFPLDGFSQTCLLEGVDQLGYLLGRVPEIERYESEHAR
>CP027562.1|AVO31883.1|4084595_4086014_+|3-isopropylmalate-dehydratase-large-subunit
MTSAPRTLYDKLWDAHVVVPESDSAPAVLYIDLHLIHEVTSPQAFTELRSRGLAPRRPDRTKATMDHSTPTLPAGADGKLPYASAASEAQVATLARNCAEYGVELFDMASDNRGIVHVIAPEQGFTQPGMTIVCGDSHTSTHGAFGSLAFGIGTSEVGHVLATQCLLQRKAKTFAITVDGPLAPGVGAKDVVLHIIGVIGVNGGTGHVIEFRGSTIEAMDMEQRMTLCNMSIEAGARAGMVAPDQVTFDFVAATPRGPKGADFDAAVARWQQLRSDEGARFDSEVHIDAAAIRPTLTWGTHPGTAIAVDAPIPAANDAAAQKGLDYMHFHAGKALAGTPVDVVFVGSCTNGRLSDMREVAQVLRGRRVAERVRMLVVPGSEIVKREAEAEGIHEIVRAAGAEWREPGCSMCIAMNGDLVAPGQLAVSTSNRNFEGRQGPGSRTLLASPMSAAWAAVNGHVADTRELFAQEVA
>CP027562.1|AVO31882.1|4083755_4084535_+|SAM-dependent-methyltransferase
MSAFDTPTPASAAGQQWNAQDYAIDAGFVPLLGGAVSRLLDPCAGERILDLGCGDGVLSTELALSGARIHGVDASPELVIAARARGVDAQVMDGHALSFDSEFDAVFSNAALHWMSNPDRVMEGVRRALRPGGRFVAEFGGHGNVATIIAAVQAARVAHGHGASAFQWYFPTADAYADRLRQHGFQVQLIECTPRPTALPTGVAGWLRVFAAPLLDDLPAAARGTVREAAAALLDDLPRNAAGQPLADYVRLRVLARRR
>CP027562.1|AVO31881.1|4082158_4083745_+|2-isopropylmalate-synthase
MTTIERITTPRIRIFDTTLRDGEQSPGCSMSPPQKLVMARALDELGVDIIETGFPASSQSDREAMALIGRELRRPSLTLAVLSRCLQADIETSARALAAAANPRLHVFLSTSPLHREHKLRMTREQVLESVHKHVSLARSYIDDVEFSAEDATRTELDYLIEVARVAIAAGATTINLPDTVGFTTPEEIRAMFQQVIAGVADVPNAANVIFSAHCHNDLGLAVANSLAAVEGGARQVECTINGIGERAGNCSLEEIAMVLKVRQAFYEQDSSINTPRIVGTSQLLQRLVGMPVQRNKAIVGANAFAHESGIHQHGMLRHRGTYEIMRPEDVGWEDSQMVLGRHSGRAAVEARLRALGFWLDEDELKLVFEQFKGLCEQQRVVTDADLQTLMQGGSNAQGYRLASMTISDVGSRANALVELSDPDGNRVAETAQGDGPVDALFGALSAATGVQLMLDSYHVHSVGIGADARGEANLSVRHEGVEYDGTGTSKDIIEASALAWLDVANRLLRQRQAAAHSSTDVATPATA
>CP027562.1|AVO31880.1|4081070_4082162_+|serine/threonine-dehydratase
MPAADTSQESDVGDVSVADVLAAQARLRRFLPPTPLHHAERFGTWLKLENLQRTGSYKVRGALNALLAGRERGDTRPVICASAGNHAQGVAWAAYRLDVPAITVMPHGAPATKIAGVAHWGATVRQHGNSYDEAYAFAVELAQRHGYRFLSAFDDADVIAGQGTVGIELAAHAPDVVIVPIGGGGLASGVALALKSQGVRVVGAQVEGVDSMARAIRGDAREIAPVASLADGVRVKIPGFLTRRLCTSLLDDVVIVREAELRETLVRLALEEHIIAEGAGALALAAGRRVAGRRKCAVVSGGNIDAGVLAGLLTDIRPRPPRKPRRRRSESPRSPSKASATASHTSSPSPLQAVTPAVEEISL
>CP027562.1|AVO31879.1|4080722_4080974_+|acetolactate-synthase
MQYRLDLVLHPAEGALLRVIGMAERRGFAPRAISGAPVAADDGRWHLQLVVDGQRPAETLCRQIEKIYDCVSVQVTAVEGASV
>CP027562.1|AVO31878.1|4079002_4080739_+|acetolactate-synthase-2-catalytic-subunit
MNSSTHRSAPPNGARWLTQALEAEGVRTLFGYPGGTIMPFYDALVDSSLKHILVRHEQGAALAANGFARASNQVGVCVATSGPGASNLVTGIADAMLDSVPMVCITGQVATPLLGTDAFQELDVFGLTMPIVKHSWLVRSVDELPRVVADAFRIAREGRPGPVLIDLPKDVQLADAGHLPAHVPSSVEPPPAPAEAAIAEAIAALAAAEKPVVYAGGGIALGDAVQDLRDFVEASAIPTVMTLRGLGALPASHPQSLGMLGMHGTRAANMAVQESDLLLVLGARFDDRATGKLAEFAPFARVVHIDADAYEISKLRSADVAVPGNVGHAIRALRAAFPSPKAHQEAWRRRCAQHRDRFAARYDAPGQHIYAPAMLKRLSELTPADAVIACDVGQHQMWVAQHCRFNHPRNHLTSGALGTMGFGLPAAMGAQFACPDRTVVLVSGDGSFMMNVQELATIARCRLPVKIVLLDNSSLGMVRQWQELFFAERYSEIDLSDNPDFVALAQVFGIAATRIDSRDDVEGGLAALLAEPGPALLHVAIDARANVWPLVPPNTANSTMLESNPAHARQETPNAIPA
>CP027562.1|AVO31877.1|4077989_4078964_+|ketol-acid-reductoisomerase
MSTNDLPQTKIAVIGYGSQGRAHALNLRESGFDVVVGLRPGGPTEVKAQADGFTVKAPADAVKDADLVAVLTPDMVQKKLYDDVLAANMKQGAVLLFAHGLNVHFDMITPREDLDVVLVAPKGPGALVRREYEIGRGVPCIWAVYQDKSGKAAEYALAYAAGLGGARANLIQTTFKEETETDLFGEQAVLCGGASALVQAGFETLVEAGYQPEIAYYEVLHELKLIVDLFYEGGISRMLEFISETAQYGDYVSGPRVIDAGTKARMKEVLKDIQDGTFTKNWVAEYEAGLPNYNKFKQADLEHPIEKVGKELRAKMVWLQGQAA
>CP027562.1|AVO31888.1|4089888_4093050_-|multidrug-transporter-AcrB
MRRFNLSEWALGNRPLVLFAMLAFAVIGAWSYKHLGQSEDPPFTFKAMVVRTMWPGATAEQVSRQVTEPIEKALMNTGEYEFIRSYSRPGESQVIFMARDSLRSKQIPDLWYQVRKRVGDIKATLPREIVGPFYNDEFGDTFGNIYALTGEGFDYAVMRDYADRIQLELQRVPDVGKIDLVGLQDEKVWIELSNTKLATLGVSLQQVQQALADQNAVTATSFFETPTDRVQLRVTGQFDSIEDIRRFPIQAGERTLHLGDIAEVKRGFADPASPKMRFMGQDAIGLAVAMKDGGDILKLGTTLDAEFERLQKTLPAGMQLRKVSDQPHAVEESVGEFVQVLTEAVVIVLLVSFFSLGLRTGLVVGVTIPLVLAMTFFVMHYFDIGLHKISLGALVLALGLLVDDAIIAVEMMATKMEQGYDRLRAASFAWESTAFPMLTGTLITAAGFLPIATAASSTGEYTRSLFQVVTIALVVSWIAAVLFIPYLGDKMLPDLFNPRLPKPDSLAGRWRAKRLQWADRHPALARWIAPKEHAHDHDPYQRPFYTRFRGFLDTCLRHRWWVIGATIALFIGSLMLFRFVPQQFFPDSTRPELMVDIELAEGASLAATQAQASKLEKLLKQREGISNYVAYVGTGSPRFYLPLDQQLPATNFAQFVVLTEDAKAREATRDWMLKDVIKQFPDVQMRVTRLENGPPVGYPVQMRVSGEHIAQVQAIARQVEAKVRENPHVMNVNLDWSEPSKVVRLVIDQDRARALGVSSAQVSQFLSSSLSGMSVSTYREGNRQIEMLLRGPDNERAQLDLIGSLAMPTSSGTAVTLSQVARLEYAFEDGIIWHRNRLPTVTVRADISDGMQALDVVQQIVPTLDGIRAELPSGYLLETGGSVEDSARGQNSIKAGMPLFLIVVATLLMLQLRSFSRAAMVLVTAPLGIIGATLFLLLFRAPFGFVALLGTIALAGMIMRNSVILIDQIQQDIDAGHDRWHSIIDATVRRFRPIVLTALAAVLAMIPLSRSAFYGSMAISIMGGLIVGTVLTLVFLPALYAAWFRVKPDESGT
>CP027562.1|AVO31889.1|4093053_4094181_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MKNMRWLGVGVLAVVAAACGRQAAEPVAAIPVLVVHPTTQDGQAPAAYPGEVRARQESPLSFRVGGNLIKRHVDAGQRVKKGQLLAELDVADYASQAAASQAQLAAAEADLVRARDDQKRYAKLAEDQLVSRSALDQQTAAFKAAQGQANAARANLAVARNQAEYAQLRAPADGVIASRQAEAGQVVSAGQTVFTLAADGGREVLIALPESSIRDYKVGQPVQVELWNRPGQLLPGTLREIAPAADAQARTYATRVSLAPEALSEVELGQSARVFAAAGRSGTLQLPLGSVLRGSDGKASVWVVNPSNGALKATPVTVGAYGAQVVPVLSGVAAGDWVVAAGGHLLREGQVVTPVDRQNRPVLAPAATPAAGKGH
>CP027562.1|AVO31890.1|4094304_4094985_+|TetR-family-transcriptional-regulator
MSSPTSRKPSAKPAAKAAGPGRPKDLGKRAAILEAAKALFIEQGYTGVSMDTIAAQAGVSKLTVYSHFGDKETLFSEAVQSKCIEMLPDALFVADADGPLRDQLIGIGLAFFELITSDAAISIQRMMMAPETDERLRELFWQAGPERTCEALADFLRARGERGELDIPDYYLAGQQFLTLVKGEVHMHMMCGMPLSPVECDPLTHVTASIDFFLRAYAPRGAGTAG
>CP027562.1|AVO31891.1|4095121_4095769_+|protein-L-isoaspartate-O-methyltransferase
MTIDYAHARELMVEQQIRPWDVLDIKVLDVLARLPREAFVADAHRALAYADVELPIGHGQKMMKPVIEGRTLQALDLQPGDEVLEIGTGSGFLSACIGALARDVLSLEIDPELAAAARARLDASGLGTNVRVEVADALAWQTERRFDVICVTGAVDVVPSQFASWLRPGGRLFVIHGRSPAMEALLVKADGSSESLFETDIDYLRGAAPAPQFHL
>CP027562.1|AVO31892.1|4095785_4097144_+|hypothetical-protein
MIRRSLAVALATALLPLSAHAADLLQVYEMARNGDPQLSAAESTRLYDKEGAVQARAALLPQIDGTATLNRSRSEADHDANSGTVTSKRRNYTINGSQTLFNWTQINNLRSQRELSKAADFTLDSANDSLIVRTSAAYFNVLVAIESLNAAQTNEAAAKKQFDFADKRLEVGLAPITDVHEARAQYDQARANTIVAQNTLADNYQALTELTGQPVVNLRGLPADFRPEVPANRGNIDELVHQATNQNPALKAQELKVSAAEAGVQAARGGHYPTLSLGGSWGKTATWGDSTGAGSLSPDARTNSIGLTLSVPIFAGGATQSGVRQALAQRDIAQDGYEQQKRALDRNTRNAYQTLVQGISEVEARRLAVVSAQSAYDASQVGLEVGTRTVLDVIQNQRILFSAQLDYAQARYTFLQNRLLLSQSLGALDVAELQDVNRLLTQDAGNPATTTH
>CP027562.1|AVO31893.1|4097212_4098430_-|amino-acid-transporter
MDSDNSCDRDACLGRDHVATVALTLLLGGSVIALVGQHTAAQAGPAIVLSLLLAALGTMPLLYCLHVLNQQLPVAGLQGLLRAGWGRASAGLLGGMLLLELVATSAGAAQSMASHLRVFLLRCGIDAGNAMPDQLAAVFGLLLLGVVGLLPPRRAVLVACALLTMKIGTGLLLLALAARYVHYALWIPWLPEATAPYRFGLGGVLAASVPLLGVFASVGLALGFPGIGRQENARQPLLLAGMLLLAMLLLIVLAALQAGLVEFPALDSTRPLSVALQQHPQLHWMMPLLPLAGAAGLAALLLVLMGVAARLGMQLWPAARHAAPGLRARLACGAVVLSAAMLALVLPAGALPVLPGPATLLVMAALCLAVLRVQASSSRVLPVLAPVAAALCVLAAVERMRVWPG
>CP027562.1|AVO31894.1|4098645_4099944_-|3-deoxy-D-manno-octulosonic-acid-transferase
MRKDPVEWILRGLYSVVLYILLPITVYHLVWRGFRVREYFRRWDERYASYPQPTGQPRVWLHAVSVGEVNAAAPLVNALREQRPDIRWVITTITPTGSERVRALWGDVLDHVYLPYDVPGSVNRFLGHFQPSLALILETELWPNMLFGCRDRGIPVYILNARLSARSLRGYRLLAALIRRALRTVTCVAAQSQDDADRFVQLGAAPEQVQALGNLKFDITTPDVQSFVEQFHARVPVGRPVWIAASTHDGEEQAVVDLHRRLRQQHPDLLLLWAPRHPERFPKVEALAREQGWNVATRRAKQWPEADTDVFVIDTLGELMPFYACAQVTFVGGSLQPIGGHNLLEPAAMGTAAVTGPHLHNFAEISRRMREAGALLIGEDVQAVGDLLQHLLDDVQARQDMARAGCTLVSNGRGALQRTLALVAPHLPPPRS
>CP027562.1|AVO31895.1|4100004_4100922_+|lipid-A-biosynthesis-lauroyl-acyltransferase
MSDATTAVRPSLRDPRNWPMFAAMFGAFAIARLPWMLQRALGRGVGWITWRLLGSRRRAAEVNLQLCFPEKDEAWRQRLVRDSFDALGVGVFECIRAWWGSIDRIRPQVQIEGLEHLRQMQAEGRGVLLVSGHFMTLEMCGRLLCDYVDLSGMYRKHKNPVYEWAVKFGRLRYAKAMFANEDIRATVRHLKKGGFLWYAPDQDMRGKDTVFVPFFGHTASTITATHQLARMTGCAVIPYFHRREGGRYFLKIGAPLENFPSEDVEADTTRVNQAIEEMVREAPDQYLWIHRRFKRQPGGRSDFYK
>CP027562.1|AVO31896.1|4100964_4101414_-|transposase
MASPRLRYGRYSCTGNVYSLTTAILGREALFADAANVAILIETLRFVERKGFSHSLAWVVMPDHLHWLMELRSETLAECMALLKSRSSRLLNRRLERRGSLWQHGYHDHAVRSDESLHEKAMYILANPVRAGLVSALGEYPHAWCRWPL
>CP027562.1|AVO31897.1|4101617_4102949_-|hypothetical-protein
MPTSPADPAVTVRDDRAGRWAPWWVLAYVALWPLPGIAETVLGLGAVYAAAHMVMRRLQRRAHLLSTAAWALTSILFLGYWLPQAFSAFDAIDPAASWTKAAAGLRYLPFMWLAAIAVATPERRRLTFSGLAVITAAWTLDALVQAVVGTSPWFWSLEQLKLAVSGHALCPADEAAVADRLSGALGPCNLKFGQVLASLSPFLLLPAARRFGNAGWLLAAAALGSVLLLAGSRASWITFALVLAYSGVRQIGWKRLAVLALVAVLGAGVLTASVPQLRERFARTAMAWDGGERGVDEALSGRARIWEAAVCMIEEHPVNGVGARGFRDAYPACVADEGPAVWGNAPALHAHQIVLEILAETGVLGLLLWLAAVAQAWRAWRYAPAAARERARPAMLALAVTLFPLNTHLAFYSAFWGGLTVLLAALFAGSLLARESDDTPTVV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP027562_6	6.2\|3572691\|29\|CP027562\|CRISPRCasFinder	3572691-3572719	29	NZ_CP041349	Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence	155587-155615	6	0.793
CP027562_6	6.2\|3572691\|29\|CP027562\|CRISPRCasFinder	3572691-3572719	29	NZ_CP004365	Komagataeibacter xylinus E25 plasmid pGX5, complete sequence	249524-249552	6	0.793
CP027562_6	6.2\|3572691\|29\|CP027562\|CRISPRCasFinder	3572691-3572719	29	NC_016037	Komagataeibacter medellinensis NBRC 3288 plasmid pGXY010, complete sequence	97175-97203	6	0.793
CP027562_6	6.1\|3572637\|29\|CP027562\|CRISPRCasFinder	3572637-3572665	29	NC_015057	Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence	144029-144057	7	0.759
CP027562_6	6.2\|3572691\|29\|CP027562\|CRISPRCasFinder	3572691-3572719	29	NC_010625	Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence	1721945-1721973	7	0.759
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1958519-1958550	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1972473-1972504	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	1242648-1242679	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	519807-519838	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1994820-1994851	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	677027-677058	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1961364-1961395	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	520323-520354	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	943496-943527	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	2068357-2068388	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	587342-587373	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	134099-134130	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	458503-458534	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	569449-569480	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	204020-204051	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1980281-1980312	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1975970-1976001	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1829842-1829873	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	1113745-1113776	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1911637-1911668	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1975793-1975824	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	202611-202642	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	1132005-1132036	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1949492-1949523	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	2027733-2027764	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	1389850-1389881	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1949805-1949836	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	2027733-2027764	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	1215566-1215597	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1949493-1949524	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1948696-1948727	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	2027733-2027764	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	2027733-2027764	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	2027733-2027764	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	720213-720244	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	2025048-2025079	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1949804-1949835	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1673099-1673130	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	2027738-2027769	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	2107870-2107901	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	2107870-2107901	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	508899-508930	7	0.781
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	519808-519839	7	0.781
CP027562_3	3.2\|1959218\|35\|CP027562\|CRT	1959218-1959252	35	NZ_CP044425	Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence	505365-505399	8	0.771
CP027562_6	6.2\|3572691\|29\|CP027562\|CRISPRCasFinder	3572691-3572719	29	MF140416	Mycobacterium phage LastHope, complete genome	58015-58043	8	0.724
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_CP035092	Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence	83571-83602	8	0.75
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NC_008688	Paracoccus denitrificans PD1222 plasmid 1, complete sequence	330918-330949	8	0.75
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1195074-1195105	10	0.688
CP027562_6	6.3\|3572745\|32\|CP027562\|CRISPRCasFinder	3572745-3572776	32	NZ_LN907828	Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence	77212-77243	10	0.688

1. spacer 6.2|3572691|29|CP027562|CRISPRCasFinder matches to NZ_CP041349 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence) position: , mismatch: 6, identity: 0.793

tgagcttgctgtcgccactgcggcccgcc	CRISPR spacer
agcgcttgctgccgccattgcggcccgga	Protospacer
 * ********.*****.*********

2. spacer 6.2|3572691|29|CP027562|CRISPRCasFinder matches to NZ_CP004365 (Komagataeibacter xylinus E25 plasmid pGX5, complete sequence) position: , mismatch: 6, identity: 0.793

tgagcttgctgtcgccactgcggcccgcc	CRISPR spacer
agcgcttgctgccgccattgcggcccgga	Protospacer
 * ********.*****.*********

3. spacer 6.2|3572691|29|CP027562|CRISPRCasFinder matches to NC_016037 (Komagataeibacter medellinensis NBRC 3288 plasmid pGXY010, complete sequence) position: , mismatch: 6, identity: 0.793

tgagcttgctgtcgccactgcggcccgcc	CRISPR spacer
agcgcttgctgccgccattgcggcccgga	Protospacer
 * ********.*****.*********

4. spacer 6.1|3572637|29|CP027562|CRISPRCasFinder matches to NC_015057 (Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence) position: , mismatch: 7, identity: 0.759

tcacatccaacttcggcgtctgcaggcgt	CRISPR spacer
ccacatccaccttcggcgtctgcgtctgc	Protospacer
.******** *************.  .*.

5. spacer 6.2|3572691|29|CP027562|CRISPRCasFinder matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 7, identity: 0.759

tgagcttgctgtcgccactgcggcccgcc	CRISPR spacer
cacccttgccgtcgccactgcggccggct	Protospacer
..  *****.*************** **.

6. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

7. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

8. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg-	CRISPR spacer
cggcctgccgccgccgcacgtcgccg-aattgt	Protospacer
******** ****.********* .*  *.**

9. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg-	CRISPR spacer
cggcctgccgccgccgcacgtcgccg-aattgt	Protospacer
******** ****.********* .*  *.**

10. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

11. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

12. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

13. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg-	CRISPR spacer
cggcctgccgccgccgcacgtcgccg-aattgt	Protospacer
******** ****.********* .*  *.**

14. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

15. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

16. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg-	CRISPR spacer
cggcctgccgccgccgcacgtcgccg-aattgt	Protospacer
******** ****.********* .*  *.**

17. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

18. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

19. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

20. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

21. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

22. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

23. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg-	CRISPR spacer
cggcctgccgccgccgcacgtcgccg-aattgt	Protospacer
******** ****.********* .*  *.**

24. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

25. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

26. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

27. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg-	CRISPR spacer
cggcctgccgccgccgcacgtcgccg-aattgt	Protospacer
******** ****.********* .*  *.**

28. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg-	CRISPR spacer
cggcctgccgccgccgcacgtcgccg-aattgt	Protospacer
******** ****.********* .*  *.**

29. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

30. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

31. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg-	CRISPR spacer
cggcctgccgccgccgcacgtcgccg-aattgt	Protospacer
******** ****.********* .*  *.**

32. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

33. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

34. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg-	CRISPR spacer
cggcctgccgccgccgcacgtcgccg-aattgt	Protospacer
******** ****.********* .*  *.**

35. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

36. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

37. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

38. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

39. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

40. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg-	CRISPR spacer
cggcctgccgccgccgcacgtcgccg-aattgt	Protospacer
******** ****.********* .*  *.**

41. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

42. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

43. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

44. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

45. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

46. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cggcctgcaggcgccgcacgtcgtcggcccgg	Protospacer
********** **.********* .* * * *

47. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg-	CRISPR spacer
cggcctgccgccgccgcacgtcgccg-aattgt	Protospacer
******** ****.********* .*  *.**

48. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

cggcctgcagccgtcgcacgtcgatgccactg-	CRISPR spacer
cggcctgccgccgccgcacgtcgccg-aattgt	Protospacer
******** ****.********* .*  *.**

49. spacer 3.2|1959218|35|CP027562|CRT matches to NZ_CP044425 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence) position: , mismatch: 8, identity: 0.771

ctaccaggagccggtcgtcggcctgcctgtggtag-	CRISPR spacer
gggccagcagccggtcgtcggcctgcttg-gccagc	Protospacer
  .**** ******************.** * .**

50. spacer 6.2|3572691|29|CP027562|CRISPRCasFinder matches to MF140416 (Mycobacterium phage LastHope, complete genome) position: , mismatch: 8, identity: 0.724

tgagcttgctgtcgccactgcggcccgcc	CRISPR spacer
cgagcttgccgtcgccactgcgcggtaca	Protospacer
.********.************   ..*

51. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_CP035092 (Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cgatccgcagccgccgcacgtcgacgccaagc	Protospacer
**..*.*******.**********.****

52. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NC_008688 (Paracoccus denitrificans PD1222 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
cgatccgcagccgccgcacgtcgacgccaagc	Protospacer
**..*.*******.**********.****

53. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 10, identity: 0.688

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
ttccctgaaaccgtcgcacgtcgatgaaaggt	Protospacer
.  **** *.****************  *

54. spacer 6.3|3572745|32|CP027562|CRISPRCasFinder matches to NZ_LN907828 (Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence) position: , mismatch: 10, identity: 0.688

cggcctgcagccgtcgcacgtcgatgccactg	CRISPR spacer
tcagccgcagacggcgcacgtcgatgccaaaa	Protospacer
. . *.**** ** ***************  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

613663 : 622791

Enterobacteria_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVO28933.1\|613663_614719_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.2e-79	46.2
AVO28934.1\|614733_615621_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	1.8e-96	58.9
AVO28935.1\|615617_616175_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.4e-46	50.6
AVO28936.1\|616171_617077_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	8.8e-30	38.6
AVO28937.1\|617314_620632_-	helicase	Q9YNZ9	Choristoneura_fumiferana_nuclear_polyhedrosis_virus	1.3e-46	30.1
AVO28938.1\|620792_621524_+	CoA transferase subunit A	NA	NA	NA	NA
AVO28939.1\|621525_622158_+	succinyl-CoA--3-ketoacid-CoA transferase	NA	NA	NA	NA
AVO28940.1\|622203_622791_+	alpha-ketoglutarate-dependent dioxygenase AlkB	A0A2K9L0M4	Tupanvirus	2.0e-22	33.1

DBSCAN-SWA_2

975360 : 1049358

Escherichia_phage(23.08%)

protease,tail,integrase,plate

attL 1035604:1035619|attR 1050279:1050294

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVO29229.1\|975360_975987_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	7.7e-57	57.4
AVO29230.1\|976113_977403_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.2e-135	58.0
AVO29231.1\|977545_979996_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	3.0e-221	52.1
AVO29232.1\|980213_980486_+	HU family DNA-binding protein	A7KV42	Bacillus_phage	7.7e-22	61.8
AVO29233.1\|981364_983320_+	peptidylprolyl isomerase	NA	NA	NA	NA
AVO29234.1\|983536_984736_-	lytic transglycosylase	NA	NA	NA	NA
AVO29235.1\|984732_985497_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AVO29236.1\|985508_986153_+	hypothetical protein	NA	NA	NA	NA
AVO29237.1\|986166_986619_+	ribonuclease HI	J9Q745	Salmonella_phage	7.7e-43	53.4
AVO29238.1\|986623_987355_+	DNA polymerase III subunit epsilon	A2I2Z6	Vibrio_virus	1.3e-07	28.9
AVO29239.1\|987424_988129_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
AVO29240.1\|988880_989285_+	hypothetical protein	A0A1C9C5K8	Heterosigma_akashiwo_virus	1.3e-17	35.3
AVO29241.1\|989303_990350_-	ADP-heptose--LPS heptosyltransferase	NA	NA	NA	NA
AVO29242.1\|990370_991120_+	3-deoxy-D-manno-octulosonic acid kinase	NA	NA	NA	NA
AVO29243.1\|991119_991887_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
AVO29244.1\|991883_992273_+	DUF4440 domain-containing protein	NA	NA	NA	NA
AVO29245.1\|992746_993064_+	quaternary ammonium compound-resistance protein SugE	NA	NA	NA	NA
AVO29246.1\|993421_1004314_+	transporter	NA	NA	NA	NA
AVO29247.1\|1004370_1004814_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AVO29248.1\|1004889_1005996_-	hypothetical protein	NA	NA	NA	NA
AVO29249.1\|1006549_1008613_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	4.3e-48	41.8
AVO29250.1\|1008619_1008940_+	nucleoid-associated protein, YbaB/EbfC family	NA	NA	NA	NA
AVO29251.1\|1009061_1009661_+	recombination protein RecR	NA	NA	NA	NA
AVO29252.1\|1009728_1010088_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA
AVO29253.1\|1010177_1010705_-	hypothetical protein	NA	NA	NA	NA
AVO29254.1\|1010701_1012651_-	DUF3488 domain-containing protein	NA	NA	NA	NA
AVO29255.1\|1012643_1013588_-	DUF58 domain-containing protein	NA	NA	NA	NA
AVO29256.1\|1013590_1014544_-	ATPase	NA	NA	NA	NA
AVO29257.1\|1014586_1016422_+	hypothetical protein	NA	NA	NA	NA
AVO29258.1\|1016522_1017092_-	septum formation inhibitor Maf	NA	NA	NA	NA
AVO29259.1\|1017205_1017715_+	hypothetical protein	NA	NA	NA	NA
AVO29260.1\|1017822_1018017_+	50S ribosomal protein L32	NA	NA	NA	NA
AVO29261.1\|1018108_1019086_+	ketoacyl-ACP synthase III	NA	NA	NA	NA
AVO29262.1\|1019163_1019946_+	serine/threonine protein phosphatase	NA	NA	NA	NA
AVO29263.1\|1020113_1021058_+	[acyl-carrier-protein] S-malonyltransferase	NA	NA	NA	NA
AVO29264.1\|1021140_1021884_+	3-oxoacyl-ACP reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	4.7e-13	32.3
AVO29265.1\|1022036_1022276_+	acyl carrier protein	B2ZXV3	Ralstonia_phage	4.6e-10	44.6
AVO29266.1\|1022419_1023682_+	beta-ketoacyl-[acyl-carrier-protein] synthase II	NA	NA	NA	NA
AVO29267.1\|1023837_1025202_+	aminodeoxychorismate synthase, component I	NA	NA	NA	NA
AVO29268.1\|1025409_1026471_+	endolytic transglycosylase MltG	NA	NA	NA	NA
AVO29269.1\|1026467_1027133_+	dTMP kinase	W8D0J5	Erwinia_phage	1.2e-20	34.9
AVO29270.1\|1027129_1028086_+	DNA polymerase III subunit delta'	NA	NA	NA	NA
AVO29271.1\|1028082_1028436_+	pilus assembly protein PilZ	NA	NA	NA	NA
AVO29272.1\|1028766_1029330_-	hypothetical protein	NA	NA	NA	NA
AVO29273.1\|1029382_1029790_-	hypothetical protein	NA	NA	NA	NA
AVO29274.1\|1030356_1030737_+	tautomerase family protein	NA	NA	NA	NA
AVO29275.1\|1030784_1031207_+	hypothetical protein	NA	NA	NA	NA
AVO29276.1\|1031274_1032348_-\|tail	phage tail protein	D5LGY1	Escherichia_phage	2.5e-95	51.6
AVO29277.1\|1032338_1032554_-\|tail	phage tail protein	A0A088FVH7	Escherichia_phage	8.8e-13	53.6
AVO29278.1\|1032537_1033005_-\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	1.6e-14	38.8
AVO29279.1\|1033007_1035458_-\|tail	phage tail tape measure protein	K4ICR4	Acidithiobacillus_phage	1.6e-09	24.3
AVO29280.1\|1035578_1035869_-\|tail	phage tail assembly protein	A0A1W6JT47	Escherichia_phage	6.5e-19	59.0
1035604:1035619	attL	NA	NA	NA	NA
AVO29281.1\|1035949_1036453_-\|tail	phage major tail tube protein	A0A193GYM4	Enterobacter_phage	5.2e-40	50.6
AVO29282.1\|1036455_1037655_-\|tail	phage tail protein	D5LGY7	Escherichia_phage	1.5e-125	53.6
AVO29283.1\|1037763_1038348_-	hypothetical protein	NA	NA	NA	NA
AVO29284.1\|1038352_1039852_-	hypothetical protein	V9IQX0	Stenotrophomonas_phage	6.9e-72	57.3
AVO29285.1\|1039859_1040639_-\|tail	phage tail protein I	V9IQK7	Stenotrophomonas_phage	3.2e-44	50.0
AVO29286.1\|1040631_1041528_-\|plate	baseplate assembly protein	V5YTH6	Pseudomonas_phage	5.8e-82	56.8
AVO29287.1\|1041530_1041869_-\|plate	phage baseplate protein	A0A193GYY8	Enterobacter_phage	7.8e-32	62.2
AVO29288.1\|1041921_1042512_-\|plate	phage baseplate assembly protein V	A0A193GYL5	Enterobacter_phage	7.3e-25	38.7
AVO29289.1\|1042508_1043063_-	hypothetical protein	NA	NA	NA	NA
AVO29290.1\|1043432_1043810_-	hypothetical protein	NA	NA	NA	NA
AVO29291.1\|1043806_1044292_-	glycoside hydrolase	D5LH07	Escherichia_phage	6.0e-41	54.4
AVO29292.1\|1044288_1044639_-	hypothetical protein	NA	NA	NA	NA
AVO29293.1\|1044635_1045085_-	hypothetical protein	NA	NA	NA	NA
AVO29294.1\|1045420_1045804_-	hypothetical protein	NA	NA	NA	NA
AVO29295.1\|1045958_1046597_-	hypothetical protein	A0A1V0DYI4	Shewanella_phage	3.4e-20	41.8
AVO29296.1\|1046637_1046865_-	hypothetical protein	NA	NA	NA	NA
AVO29297.1\|1047021_1049358_-\|integrase	integrase	A0A088FVF8	Escherichia_phage	5.6e-137	43.5
1050279:1050294	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2379278 : 2422132

Salmonella_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVO30427.1\|2379278_2380331_+\|transposase	transposase	NA	NA	NA	NA
AVO30428.1\|2380351_2381092_-	hypothetical protein	NA	NA	NA	NA
AVO30429.1\|2381235_2381586_+	XRE family transcriptional regulator	NA	NA	NA	NA
AVO30430.1\|2381760_2382180_+	transcriptional regulator	NA	NA	NA	NA
AVO30431.1\|2382293_2384162_+	copper resistance system multicopper oxidase	NA	NA	NA	NA
AVO30432.1\|2384158_2385427_+	copper resistance protein B	NA	NA	NA	NA
AVO30433.1\|2385457_2386210_+	cytochrome c	NA	NA	NA	NA
AVO30434.1\|2386184_2386739_+	DUF4440 domain-containing protein	NA	NA	NA	NA
AVO30435.1\|2386912_2387278_+	DUF411 domain-containing protein	NA	NA	NA	NA
AVO30436.1\|2387348_2387699_+	four-helix bundle copper-binding protein	NA	NA	NA	NA
AVO30437.1\|2387877_2388261_+	copper resistance protein	NA	NA	NA	NA
AVO30438.1\|2388271_2389201_+	transporter	NA	NA	NA	NA
AVO30439.1\|2389499_2391584_+	heavy metal translocating P-type ATPase	A0A218MNH6	uncultured_virus	3.7e-87	35.2
AVO30440.1\|2391612_2391888_+	hypothetical protein	NA	NA	NA	NA
AVO30441.1\|2391962_2392514_+	DUF305 domain-containing protein	NA	NA	NA	NA
AVO32685.1\|2392543_2392750_-	formimidoylglutamase	NA	NA	NA	NA
AVO30442.1\|2392718_2393108_+	TonB-dependent receptor	NA	NA	NA	NA
AVO30443.1\|2393134_2393965_+	DUF4198 domain-containing protein	NA	NA	NA	NA
AVO30444.1\|2394069_2397210_-	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA
AVO30445.1\|2397206_2398721_-	HlyD family secretion protein	NA	NA	NA	NA
AVO32686.1\|2398717_2399917_-	TolC family protein	NA	NA	NA	NA
AVO30446.1\|2400095_2400491_-	hypothetical protein	NA	NA	NA	NA
AVO30447.1\|2400628_2400892_-	copper chaperone	NA	NA	NA	NA
AVO32687.1\|2401207_2401480_+	hypothetical protein	NA	NA	NA	NA
AVO30448.1\|2401482_2402424_+	hypothetical protein	NA	NA	NA	NA
AVO30449.1\|2402596_2403229_+	hypothetical protein	NA	NA	NA	NA
AVO32688.1\|2403317_2403749_+	hypothetical protein	NA	NA	NA	NA
AVO30450.1\|2405018_2405477_+	protein tyrosine phosphatase	NA	NA	NA	NA
AVO30451.1\|2405791_2406466_-	XRE family transcriptional regulator	NA	NA	NA	NA
AVO30452.1\|2406708_2407341_-	hypothetical protein	NA	NA	NA	NA
AVO30453.1\|2407670_2407973_-	hypothetical protein	NA	NA	NA	NA
AVO30454.1\|2407992_2408193_+	hypothetical protein	NA	NA	NA	NA
AVO30455.1\|2408189_2411156_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	98.8
AVO30456.1\|2411159_2411720_-\|transposase	transposase	A0A1B0V7I5	Salmonella_phage	1.9e-59	99.2
AVO30457.1\|2411708_2411921_+	hypothetical protein	A0A1B0V7I9	Salmonella_phage	3.8e-16	84.3
AVO30458.1\|2411957_2412392_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
AVO30459.1\|2412463_2412814_+	mercuric transport protein	NA	NA	NA	NA
AVO30460.1\|2412829_2413105_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
AVO32689.1\|2413181_2413760_+	sel1 repeat family protein	NA	NA	NA	NA
AVO32690.1\|2413768_2414191_+	mercury transport protein MerC	NA	NA	NA	NA
AVO30461.1\|2414229_2415915_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	2.7e-40	28.7
AVO30462.1\|2415929_2416568_+	alkylmercury lyase	NA	NA	NA	NA
AVO30463.1\|2416679_2417045_+	transcriptional regulator	NA	NA	NA	NA
AVO30464.1\|2417041_2417278_+	mercury resistance protein	NA	NA	NA	NA
AVO30465.1\|2417293_2417614_+	DUF3330 domain-containing protein	NA	NA	NA	NA
AVO30466.1\|2417652_2418267_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	5.1e-37	51.0
AVO30467.1\|2418327_2419545_-\|transposase	transposase	NA	NA	NA	NA
AVO30468.1\|2419541_2420450_-\|transposase	transposase	NA	NA	NA	NA
AVO30469.1\|2420452_2422132_-\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP027562

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection