CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP027570	Megasphaera elsdenii DSM 20460 strain ATCC 25940 chromosome, complete genome	12 crisprs	cas14j,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas2,cas1,c2c10_CAS-V-U3,RT,cas14k,DEDDh,csa3,cas3,WYL,cas3HD,cas5,cas8c,cas7,cas8f,cas5f,cas7f,cas6f,cas3f,cas4	37	27	5	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP027570_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027570_1

151947-154473

TypeIII

Consensus_repeat	Method
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	CRISPRCasFinder
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	CRT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	PILER-CR

34 spacers

csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas2,cas1

The CRISPR arrays of CP027570_1

>merge|CP027570|1|151947-154473|CRISPRCasFinder,CRT,PILER-CR
TTATCCGTCTCCTTACGGGGATTATGGTTCTTATCCGCAAGGTCTTCACAGACCCGTAAGCTCTACACCGCCAGGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCTCCTCTGTCAACTTGATTGACCACGACAAGCCAGCAGATGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCAGGGAACGATGCAAGAACAGTTAAAGCTTGAACAAGAAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCATTGTAGAACAGCAGACTTTACGTAAAGTCAATCTTGACACGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCAACTTACTCCCATGGTGTTCATACATGGGTAAGCAGGCATGAAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCAATTTGAATGGCCGCATAATCTCATCTGGTCTGATGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCCTTTTCGTTGCGGCTTGTCTCATCAGTAGGCAGGTTGGTTTCCGTCCCTTACGGGGATTATGGTTCTTATCTGGCAAGAACTTTCCGATGAAGCAGAAAGTCTCGAAAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCAATTCATCATCTTCCCGTTTGAATCCTTGAACCTCTAAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCATGTTCTTTGACAACTGAATATAGATTTTAGGCAGGTAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCAAAACAGCCTACATCATAGACGAAATGGATGATTAGGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCTAAAAGAAGAAAAAAAGGTTCAAACGAACGCGTATTATGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCGACGGTCAATGAAGTTGACCAAAACAAAGTAGAAGAAAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCGTAATAAATCTGCTATTATGGATAGACTTCGTGAGATGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCGCAAAAAAGATGCAAGAGTCCTTAGGGATACCAAAATGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCTGTAGGTCAAGGTATTATGAACCACCTAGCAGAAACGTAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCGGTTAGAAGCGTCTCCAAACGGTCGGGTATGGTTGTTGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCAAGACAATGAAGATTTACGAACACAAAGCTATTAAGCTAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCAAACAGAGCAAGCCAGAATACCGTGACGATATTGAAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCAAATTGATAACTTCCCCGTTTTGAAAGAACGCGTAGAACGTGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCGAATTTCATGAATGTGAAGCTATGGGGCTTCTCAAGCTGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCTTCTATTATGATTGTTGCGGTTGCTTATGTTCTTGCGACGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCTCAAATCGCCGATGAATTAGCAGCGTTTTATGCTGAGGAAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCTTAGGCGTCGCGTTTGCAAGTTATGTGCTTTTAGTTTTAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCGGTAACATGTAGTCAACAAAAAGAAGTAGCTACAGAGAAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCAGGCTTTCCCTAACAGGCACTATGTCATTATCAAGGGAGGGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCATTATCGACCACCTTGTAACTTACTACAGCGGTGACAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCAGTGAGGGAACGCCGCATCATAGCACTAAGAGTAATTTTCAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCTGGCTGTATGGCTAACGCTTCGTAGGCGTCGATTTTGTCGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCTATTGTCGCTATGGAATTAATGTTTCCTATGCAAGTATGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCGTAAATTACCTCTCTTTCTTAGTTGGCTTGTCTCATGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCAAAATGCAAAAAGCAAACTAGATAAAGAAGGGGCCTGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCAAGCGCAAAGCCCGGAAGACGCCGTTAGAATCGCCGGTGAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCAGACATGTTAGTAGAACGTCAACGTGATTATGTCACAAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC

>CP027570|1|1|151947-154473|CRISPRCasFinder
TTATCCGTCTCCTTACGGGGATTATGGTTCTTATC	CGCAAGGTCTTCACAGACCCGTAAGCTCTACACCGCCAG
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	TCCTCTGTCAACTTGATTGACCACGACAAGCCAGCAGAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AGGGAACGATGCAAGAACAGTTAAAGCTTGAACAAGAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	ATTGTAGAACAGCAGACTTTACGTAAAGTCAATCTTGACAC
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AACTTACTCCCATGGTGTTCATACATGGGTAAGCAGGCATGAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AATTTGAATGGCCGCATAATCTCATCTGGTCTGAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	CTTTTCGTTGCGGCTTGTCTCATCAGTAGGCAGGTT
GGTTTCCGTCCCTTACGGGGATTATGGTTCTTATC	TGGCAAGAACTTTCCGATGAAGCAGAAAGTCTCGAAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AATTCATCATCTTCCCGTTTGAATCCTTGAACCTCTAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	ATGTTCTTTGACAACTGAATATAGATTTTAGGCAGGTA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AAAACAGCCTACATCATAGACGAAATGGATGATTAG
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	TAAAAGAAGAAAAAAAGGTTCAAACGAACGCGTATTAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	GACGGTCAATGAAGTTGACCAAAACAAAGTAGAAGAAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	GTAATAAATCTGCTATTATGGATAGACTTCGTGAGAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	GCAAAAAAGATGCAAGAGTCCTTAGGGATACCAAAAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	TGTAGGTCAAGGTATTATGAACCACCTAGCAGAAACGTA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	GGTTAGAAGCGTCTCCAAACGGTCGGGTATGGTTGTT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AAGACAATGAAGATTTACGAACACAAAGCTATTAAGCTA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AAACAGAGCAAGCCAGAATACCGTGACGATATTGAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AAATTGATAACTTCCCCGTTTTGAAAGAACGCGTAGAACGT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	GAATTTCATGAATGTGAAGCTATGGGGCTTCTCAAGCT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	TTCTATTATGATTGTTGCGGTTGCTTATGTTCTTGCGAC
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	TCAAATCGCCGATGAATTAGCAGCGTTTTATGCTGAGGAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	TTAGGCGTCGCGTTTGCAAGTTATGTGCTTTTAGTTTTA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	GGTAACATGTAGTCAACAAAAAGAAGTAGCTACAGAGAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AGGCTTTCCCTAACAGGCACTATGTCATTATCAAGGGAGG
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	ATTATCGACCACCTTGTAACTTACTACAGCGGTGACA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AGTGAGGGAACGCCGCATCATAGCACTAAGAGTAATTTTCA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	TGGCTGTATGGCTAACGCTTCGTAGGCGTCGATTTTGTC
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	TATTGTCGCTATGGAATTAATGTTTCCTATGCAAGTAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	GTAAATTACCTCTCTTTCTTAGTTGGCTTGTCTCAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AAAATGCAAAAAGCAAACTAGATAAAGAAGGGGCCT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AAGCGCAAAGCCCGGAAGACGCCGTTAGAATCGCCGGTGA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AGACATGTTAGTAGAACGTCAACGTGATTATGTCACAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC

>CP027570|1|1|151947-154473|CRT
TTATCCGTCTCCTTACGGGGATTATGGTTCTTATC	CGCAAGGTCTTCACAGACCCGTAAGCTCTACACCGCCAG
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	TCCTCTGTCAACTTGATTGACCACGACAAGCCAGCAGAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AGGGAACGATGCAAGAACAGTTAAAGCTTGAACAAGAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	ATTGTAGAACAGCAGACTTTACGTAAAGTCAATCTTGACAC
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AACTTACTCCCATGGTGTTCATACATGGGTAAGCAGGCATGAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AATTTGAATGGCCGCATAATCTCATCTGGTCTGAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	CTTTTCGTTGCGGCTTGTCTCATCAGTAGGCAGGTT
GGTTTCCGTCCCTTACGGGGATTATGGTTCTTATC	TGGCAAGAACTTTCCGATGAAGCAGAAAGTCTCGAAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AATTCATCATCTTCCCGTTTGAATCCTTGAACCTCTAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	ATGTTCTTTGACAACTGAATATAGATTTTAGGCAGGTA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AAAACAGCCTACATCATAGACGAAATGGATGATTAG
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	TAAAAGAAGAAAAAAAGGTTCAAACGAACGCGTATTAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	GACGGTCAATGAAGTTGACCAAAACAAAGTAGAAGAAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	GTAATAAATCTGCTATTATGGATAGACTTCGTGAGAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	GCAAAAAAGATGCAAGAGTCCTTAGGGATACCAAAAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	TGTAGGTCAAGGTATTATGAACCACCTAGCAGAAACGTA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	GGTTAGAAGCGTCTCCAAACGGTCGGGTATGGTTGTT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AAGACAATGAAGATTTACGAACACAAAGCTATTAAGCTA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AAACAGAGCAAGCCAGAATACCGTGACGATATTGAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AAATTGATAACTTCCCCGTTTTGAAAGAACGCGTAGAACGT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	GAATTTCATGAATGTGAAGCTATGGGGCTTCTCAAGCT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	TTCTATTATGATTGTTGCGGTTGCTTATGTTCTTGCGAC
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	TCAAATCGCCGATGAATTAGCAGCGTTTTATGCTGAGGAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	TTAGGCGTCGCGTTTGCAAGTTATGTGCTTTTAGTTTTA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	GGTAACATGTAGTCAACAAAAAGAAGTAGCTACAGAGAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AGGCTTTCCCTAACAGGCACTATGTCATTATCAAGGGAGG
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	ATTATCGACCACCTTGTAACTTACTACAGCGGTGACA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AGTGAGGGAACGCCGCATCATAGCACTAAGAGTAATTTTCA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	TGGCTGTATGGCTAACGCTTCGTAGGCGTCGATTTTGTC
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	TATTGTCGCTATGGAATTAATGTTTCCTATGCAAGTAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	GTAAATTACCTCTCTTTCTTAGTTGGCTTGTCTCAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AAAATGCAAAAAGCAAACTAGATAAAGAAGGGGCCT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AAGCGCAAAGCCCGGAAGACGCCGTTAGAATCGCCGGTGA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AGACATGTTAGTAGAACGTCAACGTGATTATGTCACAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC

>CP027570|1|1|152021-154473|PILER-CR
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	TCCTCTGTCAACTTGATTGACCACGACAAGCCAGCAGAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AGGGAACGATGCAAGAACAGTTAAAGCTTGAACAAGAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	ATTGTAGAACAGCAGACTTTACGTAAAGTCAATCTTGACAC
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AACTTACTCCCATGGTGTTCATACATGGGTAAGCAGGCATGAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AATTTGAATGGCCGCATAATCTCATCTGGTCTGAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	CTTTTCGTTGCGGCTTGTCTCATCAGTAGGCAGGTTGGTTTCCGT
CCCTTACGGGGATTATGGTTCTTATCTGGCAAGAA	CTTTCCGATGAAGCAGAAAGTCTCGAAAGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCAATTCATCA	TCTTCCCGTTTGAATCCTTGAACCTCTAAGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCATGTTCTTT	GACAACTGAATATAGATTTTAGGCAGGTAGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCAAAACAGCC	TACATCATAGACGAAATGGATGATTAGGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCTAAAAGAAG	AAAAAAAGGTTCAAACGAACGCGTATTATGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCGACGGTCAA	TGAAGTTGACCAAAACAAAGTAGAAGAAAGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCGTAATAAAT	CTGCTATTATGGATAGACTTCGTGAGATGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCGCAAAAAAG	ATGCAAGAGTCCTTAGGGATACCAAAATGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCTGTAGGTCA	AGGTATTATGAACCACCTAGCAGAAACGTAGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCGGTTAGAAG	CGTCTCCAAACGGTCGGGTATGGTTGTTGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCAAGACAATG	AAGATTTACGAACACAAAGCTATTAAGCTAGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCAAACAGAGC	AAGCCAGAATACCGTGACGATATTGAAGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCAAATTGATA	ACTTCCCCGTTTTGAAAGAACGCGTAGAACGTGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCGAATTTCAT	GAATGTGAAGCTATGGGGCTTCTCAAGCTGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCTTCTATTAT	GATTGTTGCGGTTGCTTATGTTCTTGCGACGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCTCAAATCGC	CGATGAATTAGCAGCGTTTTATGCTGAGGAAGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCTTAGGCGTC	GCGTTTGCAAGTTATGTGCTTTTAGTTTTAGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCGGTAACATG	TAGTCAACAAAAAGAAGTAGCTACAGAGAAGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCAGGCTTTCC	CTAACAGGCACTATGTCATTATCAAGGGAGGGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCATTATCGAC	CACCTTGTAACTTACTACAGCGGTGACAGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCAGTGAGGGA	ACGCCGCATCATAGCACTAAGAGTAATTTTCAGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCTGGCTGTAT	GGCTAACGCTTCGTAGGCGTCGATTTTGTCGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCTATTGTCGC	TATGGAATTAATGTTTCCTATGCAAGTATGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCGTAAATTAC	CTCTCTTTCTTAGTTGGCTTGTCTCATGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCAAAATGCAA	AAAGCAAACTAGATAAAGAAGGGGCCTGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCAAGCGCAAA	GCCCGGAAGACGCCGTTAGAATCGCCGGTGAGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATCAGACATGTT	AGTAGAACGTCAACGTGATTATGTCACAAGTTTCCGTC
CCCTTACGGGGATTATGGTTCTTATC

Protein	Signature genes	Signature genes Name	Protein_function
CP027570.1\|AVO73595.1\|149514_149913_-\|(deoxy)nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|239517
CP027570.1\|AVO73591.1\|142621_144076_-\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
CP027570.1\|AVO73588.1\|139571_140318_-\|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB	unknown	unknown	gnl\|CDD\|223640
CP027570.1\|AVO73605.1\|162845_163151_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP027570.1\|AVO73596.1\|149950_151156_-\|aspartate-aminotransferase	unknown	unknown	gnl\|CDD\|224090
CP027570.1\|AVO73589.1\|140314_140800_-\|RNAase	unknown	unknown	gnl\|CDD\|224850
CP027570.1\|AVO73590.1\|140796_142242_-\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
CP027570.1\|AVO73606.1\|163159_164155_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
CP027570.1\|AVO73604.1\|160267_162790_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
CP027570.1\|AVO73601.1\|158169_159180_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	gnl\|CDD\|380071
CP027570.1\|AVO73607.1\|164790_165174_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
CP027570.1\|AVO73600.1\|156991_158173_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|273863
CP027570.1\|AVO73599.1\|156248_156998_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
CP027570.1\|AVO73592.1\|144108_145269_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|236492
CP027570.1\|AVO73597.1\|151199_151400_-\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO73602.1\|159183_159867_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|274212
CP027570.1\|AVO73593.1\|145278_146460_-\|PIN/TRAM-domain-containing-protein	unknown	unknown	gnl\|CDD\|227292
CP027570.1\|AVO73603.1\|159869_160250_-\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl\|CDD\|367635
CP027570.1\|AVO73598.1\|154882_156235_-\|hypothetical-protein	csm6	pfam09659_csm6_CAS-III-A	gnl\|CDD\|312974
CP027570.1\|AVO73594.1\|146628_149505_-\|DUF3427-domain-containing-protein	unknown	unknown	gnl\|CDD\|378760

Protein	Function_ID	Function_description	E-value
CP027570.1\|AVO73595.1\|149514_149913_-\|(deoxy)nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|239517	cd03425, MutT_pyrophosphohydrolase, The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi). This enzyme requires two divalent cations for activity; one coordinates the phosphoryl groups of the NTP/dNTP substrate, and the other coordinates to the enzyme. It also contains the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as metal binding and catalytic site. MutT pyrophosphohydrolase is important in preventing errors in DNA replication by hydrolyzing mutagenic nucleotides such as 8-oxo-dGTP (a product of oxidative damage), which can mispair with template adenine during DNA replication, to guanine nucleotides.	4.42826e-45
CP027570.1\|AVO73591.1\|142621_144076_-\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
CP027570.1\|AVO73588.1\|139571_140318_-\|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB	gnl\|CDD\|223640	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis].	8.23456e-87
CP027570.1\|AVO73605.1\|162845_163151_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.09423e-22
CP027570.1\|AVO73596.1\|149950_151156_-\|aspartate-aminotransferase	gnl\|CDD\|224090	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].	4.9162e-114
CP027570.1\|AVO73589.1\|140314_140800_-\|RNAase	gnl\|CDD\|224850	COG1939, COG1939, Ribonuclease III family protein [Replication, recombination, and repair].	8.50583e-28
CP027570.1\|AVO73590.1\|140796_142242_-\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
CP027570.1\|AVO73606.1\|163159_164155_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	6.59652e-107
CP027570.1\|AVO73604.1\|160267_162790_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	0
CP027570.1\|AVO73601.1\|158169_159180_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|380071	pfam17953, Csm4_C, CRISPR Csm4 C-terminal domain. Clustered, regularly interspaced, short palindromic repeat (CRISPR) loci play a pivotal role in the prokaryotic host defense system against invading genetic materials. The CRISPR loci are transcribed to produce CRISPR RNAs (crRNAs), which form interference complexes with CRISPR-associated (Cas) proteins to target the invading nucleic acid for degradation. The interference complex of the type III-A CRISPR-Cas system is composed of five Cas proteins (Csm1-Csm5) and a crRNA, and targets invading DNA. This entry represents the C-terminal domain found in Csm4. Csm4 structurally resembles Cmr3, a component of the type III-B CRISPR-Cas interference complex. Studies indicate that Csm3-Csm4 complex binds single-stranded RNA in a non-sequence-specific manner. Structural analysis show, Csm3 and Csm4 have one and two ferredoxin-like folds (also known as an RRM-like fold), respectively. The long beta-hairpin inserted into the C-terminal ferredoxin-like fold of Csm4, is well-conserved in the Cmr3 structure. The corresponding beta-hairpin of Cmr3 binds the D1 domain of Cmr2, as observed in the Cmr2-Cmr3 complex structure. Furthermore, it is suggested that the hairpin of Csm4 is responsible for the interaction with Csm1 (ortholog of Cmr2).	1.27168e-34
CP027570.1\|AVO73607.1\|164790_165174_-\|transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	6.58072e-30
CP027570.1\|AVO73600.1\|156991_158173_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|273863	TIGR01899, cas_TM1807_csm5, CRISPR type III-A/MTUBE-associated RAMP protein Csm5. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm5, for CRISPR/cas Subtype Mtube, protein 5.	3.31925e-27
CP027570.1\|AVO73599.1\|156248_156998_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.22346e-15
CP027570.1\|AVO73592.1\|144108_145269_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|236492	PRK09382, ispDF, bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional.	4.78696e-132
CP027570.1\|AVO73602.1\|159183_159867_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|274212	TIGR02582, CRISPR_type_III-associated_RAMP_protein_Csm3, CRISPR type III-A/MTUBE-associated RAMP protein Csm3. Members of this CRISPR-associated (cas) gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm3, for CRISPR/cas Subtype Mtube, protein 3.	7.27573e-75
CP027570.1\|AVO73593.1\|145278_146460_-\|PIN/TRAM-domain-containing-protein	gnl\|CDD\|227292	COG4956, COG4956, Integral membrane protein (PIN domain superfamily) [General function prediction only].	4.77472e-124
CP027570.1\|AVO73603.1\|159869_160250_-\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	1.56167e-24
CP027570.1\|AVO73598.1\|154882_156235_-\|hypothetical-protein	gnl\|CDD\|312974	pfam09659, Cas_Csm6, CRISPR-associated protein (Cas_Csm6). Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	6.74579e-53
CP027570.1\|AVO73594.1\|146628_149505_-\|DUF3427-domain-containing-protein	gnl\|CDD\|378760	pfam11907, DUF3427, Domain of unknown function (DUF3427). This presumed domain is functionally uncharacterized. This domain is found in bacteria and archaea. This domain is typically between 243 to 275 amino acids in length. This domain is found associated with pfam04851, pfam00271.	8.19706e-93

>CP027570.1|AVO73597.1|151199_151400_-|hypothetical-protein
MSCDIIKKDKVVFAGLMMYNGERTMIKRNFSLKKIHGQWPLCRGFHVGNLLERIYHSLFWGFDGPL
>CP027570.1|AVO73596.1|149950_151156_-|aspartate-aminotransferase
MKYDFTTIIDRAGKDATAFDGIGKTVWGFEPDKAKPGFDEIPMWVADMSFATCPAVVQAMEQRLKHPLFGYFLPSDAYYQRIIDWQTTRHDWPELTRDMIGYENGVHGGITSTIQVLTEPGDAVLVHSPTYPGFIGDLSNTGRHVVFSPLRKEQGIWRMDFADMEEKIKKHHVHLAIFCSPQNPTGRVWERWEIEQAMALFKKYDVWVISDEIWSDIIFQGHCHIPTAAVSEDARQRTVAFYAPSKTFNLAGLIGSYHIIANPLLREKITQHGQRTCYNEMNVLSMHALIGAYSQDGHEWTDELNQVLESNCRYATQYIQDHFPGCQVSLPQGTYMLFVECGEYLKANQMTLPELLKKAWDVGVAWQDGRKFAWKDAMRLNLALPRTRLEEAMRRLSEYVF
>CP027570.1|AVO73595.1|149514_149913_-|(deoxy)nucleoside-triphosphate-pyrophosphohydrolase
MKHLEVVAAILEYDGKILCMERGQGKFDYVSFKYEFPGGKIEPGEAKHTAIERELREEMDVHVSVKESDLYMTVHHDYPDFSMTMYAFYCHLDKPDFVRKEHVDAKWMTPEDMPTLDWAPADVPIMKKLSGK
>CP027570.1|AVO73594.1|146628_149505_-|DUF3427-domain-containing-protein
MVEYGALEQCLREGFIDYTVEADQRYVPKILTNNKEKKRKVLDTILSQLYVCDSFLFSVAFLTKSGIACLKDALIQNRKATGKILASQYLNFTEPGALRELLKFPNVELRMVTEERAFHAKGYLFHRPQAGPENYTMVIGSSNMTANALTHNQEWNVFFTSAENGSLIRQTKEEFDALWDTAEVVDEAWIQAYESVYTHNKPKRQSVYVPFHKIQPNAMQKAALAGIQKLRDDGQDRGLLISATGTGKTYLSAFDVLKMQPRRFLFVVHRELIVKSARDSYVRIGINPADTGLLTGHDKELDKPYIFATIQTLSQDEILHTFAPDTFDYIVIDEVHHGGAATYQKVIRYFQPKFLLGMTATPERSDDFDIYALFHHHIAYEIRLHDALEENMLVPFHYHGISEITVNGKVLDDMSDFALLTCEERVKHILYYADLYGSDAERIKGLVFCRNVDEAQALAETFRQHGKRAVALTGASSERERSEAIGHLEAKAAEDLQYLDYIFTCDIFNEGVDIPQVNQVIMLRPTTSAIVFVQQLGRGLRKYPHKRYLEVLDFIGNYENNFLLPIALFGDRTYDKDFVRRLMQVNFLPGPTSVHFDDIAKERIYAAIDAKSALADLRDLKESYRNMAYRLGRQPMMMDFVRFGDKDPALFVAKKESFFEFVQYMEPFASTLTEAHRAVLKMLSLELANGKRIEELLVLRHLLMESSWSTAALAREMSETYHFLPSTETMESVARLLNLQFFTKTARKKYGSEPLISFENHAYVATSYWNDLKANEEFQRYVQDILDYGTYRFENLYVHDEPEIVRGFVRYGRYSRKDVSRILNYETNREGTLNGYQIVGATCPIFVTYEKREDISANTKYEDQFVSPQQFSWMTRARIHLTSSQIPAICDEHTRKLLFVKKSDAEGSDFYYIGDLTVLGKPVETTIANDKGQQLPIVNFQFLLDKPVEDKLYRYLCE
>CP027570.1|AVO73593.1|145278_146460_-|PIN/TRAM-domain-containing-protein
MEDKYGLDHEEPKSKKFNGRNVADNIMKGVIVLIMAVIFVMIADQVITTPFISAEIEGEFFHGSIFGTTIITIVAYIIGILVGALVGYGISPFVLRLIWAAIHRIESGLSDFESQDIIVGTLGLLFGLIIANLIGLAFARLPIIGAYGPIVFSIVFGYAGMSIATRKKSEIIALVSNLRLGKSGKEHSGKRKDMDFSGKLLDTSAIIDGRIAEICSTGFLEGPLLVPVFVLEELQLIADSSDLLKRNKGRRGLDILKQMQEDNYVEVRIINDDFDDVQGVDSKLVRLGRKINAKVVTNDYNLNKVAALQGVAVLNINDLANALKPARIPGEHMNVLIVKAGKEENQGVAYLDDGTMIVVEDGQKYIGSTVPVTVTSVLQTSAGRMIFVKIANE
>CP027570.1|AVO73592.1|144108_145269_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MKVSVIVVAAGTGSRFGYERNKLFYPLCGEPVLAHTLRHIFAARSVSEVVIVHSRVDEKEIRRLVDDLHPIQPVRYALGGAEREDSVYNGLMAVSRDMDVVIVHDGARPFAGPDWYDQGAAMMETARAAIYGIPLKDTVKVRGDDGRLHTLNRSRLVAAQTPQIFHRDLLVEAHEHARAEGIQATDDASLVEAMGVPVVILEGSEKNRKVTTRDDIPILSLYMKGREVQRIGTGYDVHRLKEGRRLVLGGVEIPFERGLDGHSDADVVIHAIMDALLGAAGLRDIGTYFPDMDQAFKDISSLVLLEKVRHLLREKCCRIVNLDVTLLAQRPKIKPYVPQMIANIAEALRIPKAAVSVKATTTEKLGFVGREEGMAAQAAAMVLSYQ
>CP027570.1|AVO73591.1|142621_144076_-|glutamate--tRNA-ligase
MSQEVRVRFAPSPTGPFHIGGARSALFNYLVAKHNHGKFVVRIEDTDRKRSTSESEENIKEALKWLGINWDEGIDVGGPNGPYRQTERLDIYKKYTEKLLAEGKAYYCFCTPEELEAEKQAQLAKGETPVYSGKCADLPKETVEQYLREGRPHVIRIKTPKNETIELDDLVRGHVSFDSNNVGDFVIVKSDGIPVYNYCVVLDDALMHITHVIRAEEHLSNTPRQLVIYKALGFEAPKFAHVSLILGADKKKMSKRHGATSVQQYRDMGYLPDALVNFLALLGWTPDGDQEIFSRDELIEQFTLDRVAKNPAVFDIEKLNWINFHYMKQLDEDQLYAVCLPHLQKAGYASETPDETEAAWLKSVCAAMREHVQYGAQIVDAAKVFFTDDYAPENEETAAVLKEETAPSVLKMFRDELAALDDVTPDTVQPLFKKIQKGLKVKGKFVYMPIRVAVTGVMHGPDLNVIVALMGRDKVLQRLDKICG
>CP027570.1|AVO73590.1|140796_142242_-|cysteine--tRNA-ligase
MRELKVYNTLTRKKETFVPVTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLGYEVTHIQNFTDVDDKIINAANGEGVTWDTISNRYIASYFEVMDKLHIRRADKYPRVSEHMDEIIHMVQTLIDKGYAYVIDHDVYYSVEKFNDYGELSGRSLDDMMAGARIEVDDRKHNPMDFALWKGAKPGEPSWDSPWGKGRPGWHIECSAMSNKYLGDTFDFHGGGSDLIFPHHENEIAQSEAFTGKKPMVKYWLHNGFITINSEKMSKSLNNFFLVKDVLEHYSPDALRFFLISNHYRSPLDFSDERLEEMTRSLERLGTAIDNVLELLAMPAGAKSPEAQQLLETAHKDEEAFENAMCDDFNTALASAAMFDLAKNVNIFKNAVVNNGVPVDSAALSEVKRVFKTFTDILGILEDRWTGKKEDASSKDYDDLMQAILDIRQECRAQKQYALADAIRDKLAALGITIEDSPQGARWKK
>CP027570.1|AVO73589.1|140314_140800_-|RNAase
MKFKQLQALKKRAYRAFADGKRLDVPDQDAAHLDSINLAFVGDAYYALTLRKRLVETGIPHVQVLHTLAAEFVSAKAQAYVYRRIHDGLTDEEKAVCQRARNAYTLAPKSATVAEYHDSTALEALVGYLVMAGRQERLDTVMGQVYEETKAYCNEKHGGME
>CP027570.1|AVO73588.1|139571_140318_-|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB
MSEANIIIGRNSVTEALKAGRSITKLYVAAGNESQPLQRIRDLADRKEILVEDVPLKVLNHLAPGNRHQGVIAFAKPVEYADLTDVLIAADEKGKVPFLVLLDGIEDVHNMGAIIRTAECAGVDAVLLPKRRTAPINETVGKTSAGAVEYMPLVQIGNIAQTLKQLKKRGFWVIGADMDGETDYFHSSLTDPVVLVIGSEGRGISHLVKETCDVLVQIPMFGHVNSLNASVAAALLMYEVVRQRQAGE
>CP027570.1|AVO73598.1|154882_156235_-|hypothetical-protein
MKILFSPIGTTDPVRNCRDGACLHILRYYHPDKVVLYFTAEMEKRERNTHMYTLGIEHVQPGCPVESLYSGIVDAHLYDAYLHDLPGHVLKLHQIYPEAEILLNLSSGTPQIKVVLAIMSTEYAWCRGIQVASPEHRSNTNNIPVQDEEDVEEMLACNEDDEPDAPNRCEEPHLEILRFYREKYEIMSLVNQYEYMGAWAFCKGSHTISAQTKKLIQFAMYRSDLQTKAAQQIMRKYHGQALFPFEREGESLTEYLLTMQIHKEKKQYASFMVQISPFLYELFVTYAKMNLKIPLLNYREKVAGRRILRRQTLLQKPQGPELIAYLDHVWPQPFYDSELSFILLYQVFCFAEQFDGAKDAEKHHEFMTDPLMNSANPYMDKLRKLRNNTAHEIINVTEETIQKRTGLTPDDIMTSFWNLLSIIYGSPVNRQRMAYKRLNQWIGESLLINL
>CP027570.1|AVO73599.1|156248_156998_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MLRLIEIPLKMPEHTRIHPAMGSIFHGALMDVIAPTSAELYHHMTLRPYSQVVYWDETKHCPLWRIGTLTDEAYERLVIPLEKVPALWLKQKQYEVSLGPMQLLRQTSFEDLAAQFVKADSAPAGAEWQCLSIMSFKQEGRYVILPDIRLIYQSLLQRWNTFSDTVKLEQDDLLEQLTSHCRLTKYQLRSQVFSVNGSQIYGCEGWQRFSFFGYDMLKRLQGLLASLAPFSGVGVKTALGMGAVDTTVL
>CP027570.1|AVO73600.1|156991_158173_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MINAEKWEHKTYELTCISPIHVGNGEVLKQYEYIFTKDRNQQRVYFLDKAKWMNFLIRHHLIDDYASQVFSGKMNLRGWLQAQRLGSLSTIIREICISSADVYLVRDVKQRLNDIHRQVKTPDGTPYIPGSTLKGAIRSAILFHDIRQHPDDYRLFWSRIKAAMKARERDRYDKQMGHLVQAIERKAFARLKQYKNQPDDALQSVMKGLSVSDAMLVGHERDTVILQKYDVSAVCREGLDGHSLALFRECIPAGRKFRFSMTLDRDIAKRIGITTLDDIWQWVRDYLAFGLAQEKAVFGHEYKGKFEESKLADIRLGGGTGFLTKTVYYALAPKEEGRTVLAEFFDKVLFTRRSCHHHMTKDDKLTPRTLKLAWVHDDCQILGLAAVKEVASC
>CP027570.1|AVO73601.1|158169_159180_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MKYALYPLQFDTPVHFGCAENGGKLEQSSLNYRADSLFSALCYELSLQGDEKGLTHLQEAIVKGKLVFSDLFPYIYDDTEELQLYVPKPILSIPAESRQETVDYDTFRRQATQQKRQKKLSYIRISQLADFIQAMKAGKSFCSDEPCFGCGQLLTRVNCTEAVPRPYYVHQIQFTEEAGLYGLVGYEDDEDWDWLQSLLELLGFSGIGGKRSSGYGKFHFRDDPIDMDELGVYEDDRILYKGLTMSNASMYMCLSVLLPTPAEVIDVQEGQYALCRRSGFLSPDGGRMQKKNDIYMIQAGSCFPKKLAGCMAEVGGQDAVHPVWRYGKGLYVGVML
>CP027570.1|AVO73602.1|159183_159867_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MAQEKLCGKLKMTAKLRLETGLHIGGSDEFAPIGAVDSAVIRDPYTKEPIIPGSSLKGKIRSLLRRNQGGLNLETESPVVKRLFGTADKQAATPARLQFLDIRMDENSVKAMEQMEMDTYLGEIKFENSINALTGEANPRQIERVPAGAVFNFQLIYNISNIEQVAEDLQALIDGIRLLTWDYLGGHGSRGYGRVAFSCWDVQGFSGLSDTDVQPFVDEALQLLKEV
>CP027570.1|AVO73603.1|159869_160250_-|type-III-A-CRISPR-associated-protein-Csm2
MQDIAKEAEQAILALKKQNNGKIYLKTNQIRKFLTAVNAITNKVNVYKAKHLDATELPDELAGEIQFLKVKAAYQAGRERSVKDFMKQSNMKQHIEAVGTSIAKYEAFAHYVEALVAYHKFYGGKD
>CP027570.1|AVO73604.1|160267_162790_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MSYGKELRWLPVTEIDLEKAALLHDIGKLYQRAGEIRKSHSVVGQEILAHFFDANHQAILRAVACHHQNELQTNHLPDDDISYIVYEADNLAAASDRRTLMLEGAQTGKGMHFVSDLPLGSIFNIFNRKGDTDQSAYRLEGIEESKGWPYSDNRNEIAAPSTSYEKLATALTDIFKKRSPQDMTLSELLQALEKTLSYVPSSTNTVEAADISLYDHQKLTAAFAVCLWHVFQERGITDYKSYCYGKKQKTLRTAPAYRLASGDISGIQKFIYTIPSKGALKSLRGRSLYLDILLEHIVDEILEACHVSRSCLLYTGGGHFYLLLPNTVHTQEVLQKADTAINGWFLRHYGTNLYIALASVSCSAADFSVHGGGAGKVFQKVSQALRQKKLCRYNQEQLTALFDAHSVYNENTDGSRECAICHTASSAADLRPYGDDTDEGAEEACKACNALFQLGKSSLTASVFAISASAGRQGVPLPGLSQDYYLQTIREENLSTMDRPKRIYVKNELTLGQAVSTHLWMGDYVTCNEQGHAVEFTELAQQSGGSREDTGIARIGVLRCDVDNLGAAFIAGFSPEYDTLSRKVTLSRNLSLFFKQYIKTLCQGHTASGVSEFTLFADEIKKERKIHVIYSGGDDMFLAGTWDDILEAAVDIRHAFRRFTNGKLTFSAGIGFFHPSCPIAQMARKTGDLEDYAKANPHHDKDSLALFGEVSQPAGKGSVVMTARYSWDDFEQGVCQEKLRFLERNLTLQKENPSKLFVGKTALYRLLDLLRQAEADSSHIQLARFAYTLARMEPKQRDSGKWRCYQALRTTLYDWYQSTADRQQLMTAIELLIYHVRDKE
>CP027570.1|AVO73605.1|162845_163151_-|CRISPR-associated-endonuclease-Cas2
MKNSQTESVDDKKYIVLIIYDITDNKTRNKMVACLEKYGVRVQKSAFEAYITKRKYHKLMQEAPFLIDTDTDSLRIYLLDSYMAVHSWGRGDTHTEDVIIL
>CP027570.1|AVO73606.1|163159_164155_-|CRISPR-associated-endonuclease-Cas1
MSFAYITEKGATISKKDGRFVVGRNHETLLEIPEETLEGLLVTDTVQLTSHAIVSLLHLGIPVTWLSSHGKYFGRLESTRHVSVFKQKQQFLLQDQPFSLEMSRRVLLAKVHNQLTLLRRYNRDRKIPSVMIDIHNMMTMADHLKIAEDCESLMGYEGMAAKIYFSALGKLVDPTFAFEKRSKRPPLDPFNSLLSFAYTLIMYELFTAITNEGLHPYVGFLHTLKEHHPALASDLLEEWRAVLADSFVMSLVQHHEIKEEHFCCDEANHGIYLTPEGRKIFFRAYEKKMRSINQYIDGKHSFRRSLNYQVAQYGQALMAREPKLYEPIWIR
>CP027570.1|AVO73607.1|164790_165174_-|transcriptional-regulator
MAKKPLPKEKNIYETDCPILYAMKMIGQKWKLPILWYIADAENQTLRYRELERKVVGITATMLTKCLRELEQDKFITRKQYSTIPPTVEYSLAERGKTLIPALESVYQWADDQMKKENKIQTSDSLS

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Crispr_ID: CP027570_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027570_2

164175-164504

TypeIII

Consensus_repeat	Method
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	CRISPRCasFinder
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	CRT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	PILER-CR

4 spacers

cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csm6

The CRISPR arrays of CP027570_2

>merge|CP027570|2|164175-164504|CRISPRCasFinder,CRT,PILER-CR
AGATACGTCCCCTTACGGGGATTATGGTTCTTATCCAGCAAGTGGCGCTTGTTGAGTGCTAACCGCGTACCATGGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCATAGAGACATTGTCATTACACAATGGCTCTCCGCCTAAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCGGAGTTTATCATGAAAAAGTTATATGTTTTAAAGATGATGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATCAGCAATACAAGCTGTCGTCATGATCAAACCTTCATTATAGTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC

>CP027570|2|2|164175-164504|CRISPRCasFinder
AGATACGTCCCCTTACGGGGATTATGGTTCTTATC	CAGCAAGTGGCGCTTGTTGAGTGCTAACCGCGTACCATG
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	ATAGAGACATTGTCATTACACAATGGCTCTCCGCCTAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	GGAGTTTATCATGAAAAAGTTATATGTTTTAAAGATGAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AGCAATACAAGCTGTCGTCATGATCAAACCTTCATTATA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC

>CP027570|2|2|164175-164504|CRT
AGATACGTCCCCTTACGGGGATTATGGTTCTTATC	CAGCAAGTGGCGCTTGTTGAGTGCTAACCGCGTACCATG
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	ATAGAGACATTGTCATTACACAATGGCTCTCCGCCTAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	GGAGTTTATCATGAAAAAGTTATATGTTTTAAAGATGAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AGCAATACAAGCTGTCGTCATGATCAAACCTTCATTATA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC

>CP027570|2|2|164249-164504|PILER-CR
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	ATAGAGACATTGTCATTACACAATGGCTCTCCGCCTAA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	GGAGTTTATCATGAAAAAGTTATATGTTTTAAAGATGAT
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC	AGCAATACAAGCTGTCGTCATGATCAAACCTTCATTATA
GTTTCCGTCCCCTTACGGGGATTATGGTTCTTATC

Protein	Signature genes	Signature genes Name	Protein_function
CP027570.1\|AVO73598.1\|154882_156235_-\|hypothetical-protein	csm6	pfam09659_csm6_CAS-III-A	gnl\|CDD\|312974
CP027570.1\|AVO73613.1\|169227_170607_-\|DNA-repair-protein-RadA	unknown	unknown	gnl\|CDD\|236994
CP027570.1\|AVO73610.1\|166724_167930_-\|aspartate-aminotransferase	unknown	unknown	gnl\|CDD\|224090
CP027570.1\|AVO73604.1\|160267_162790_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
CP027570.1\|AVO73612.1\|168352_168682_-\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO73606.1\|163159_164155_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
CP027570.1\|AVO73600.1\|156991_158173_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|273863
CP027570.1\|AVO73614.1\|170616_173049_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|223616
CP027570.1\|AVO73616.1\|174124_174640_-\|DNA-helicase-UvrB	unknown	unknown	gnl\|CDD\|226397
CP027570.1\|AVO73607.1\|164790_165174_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
CP027570.1\|AVO73601.1\|158169_159180_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	gnl\|CDD\|380071
CP027570.1\|AVO73599.1\|156248_156998_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
CP027570.1\|AVO73615.1\|173056_174121_-\|ATP--guanido-phosphotransferase	unknown	unknown	gnl\|CDD\|234894
CP027570.1\|AVO73597.1\|151199_151400_-\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO73608.1\|165306_166380_+\|NADH-dependent-flavin-oxidoreductase	unknown	unknown	gnl\|CDD\|239201
CP027570.1\|AVO73602.1\|159183_159867_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|274212
CP027570.1\|AVO73609.1\|166427_166664_+\|alpha/beta-hydrolase	unknown	unknown	unknown
CP027570.1\|AVO73603.1\|159869_160250_-\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl\|CDD\|367635
CP027570.1\|AVO73611.1\|168045_168342_-\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO73605.1\|162845_163151_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856

Protein	Function_ID	Function_description	E-value
CP027570.1\|AVO73598.1\|154882_156235_-\|hypothetical-protein	gnl\|CDD\|312974	pfam09659, Cas_Csm6, CRISPR-associated protein (Cas_Csm6). Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	6.74579e-53
CP027570.1\|AVO73613.1\|169227_170607_-\|DNA-repair-protein-RadA	gnl\|CDD\|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
CP027570.1\|AVO73604.1\|160267_162790_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	0
CP027570.1\|AVO73614.1\|170616_173049_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	0
CP027570.1\|AVO73606.1\|163159_164155_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	6.59652e-107
CP027570.1\|AVO73600.1\|156991_158173_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|273863	TIGR01899, cas_TM1807_csm5, CRISPR type III-A/MTUBE-associated RAMP protein Csm5. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm5, for CRISPR/cas Subtype Mtube, protein 5.	3.31925e-27
CP027570.1\|AVO73616.1\|174124_174640_-\|DNA-helicase-UvrB	gnl\|CDD\|226397	COG3880, COG3880, Modulator of heat shock repressor CtsR, McsA [Signal transduction mechanisms].	4.78568e-39
CP027570.1\|AVO73607.1\|164790_165174_-\|transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	6.58072e-30
CP027570.1\|AVO73601.1\|158169_159180_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|380071	pfam17953, Csm4_C, CRISPR Csm4 C-terminal domain. Clustered, regularly interspaced, short palindromic repeat (CRISPR) loci play a pivotal role in the prokaryotic host defense system against invading genetic materials. The CRISPR loci are transcribed to produce CRISPR RNAs (crRNAs), which form interference complexes with CRISPR-associated (Cas) proteins to target the invading nucleic acid for degradation. The interference complex of the type III-A CRISPR-Cas system is composed of five Cas proteins (Csm1-Csm5) and a crRNA, and targets invading DNA. This entry represents the C-terminal domain found in Csm4. Csm4 structurally resembles Cmr3, a component of the type III-B CRISPR-Cas interference complex. Studies indicate that Csm3-Csm4 complex binds single-stranded RNA in a non-sequence-specific manner. Structural analysis show, Csm3 and Csm4 have one and two ferredoxin-like folds (also known as an RRM-like fold), respectively. The long beta-hairpin inserted into the C-terminal ferredoxin-like fold of Csm4, is well-conserved in the Cmr3 structure. The corresponding beta-hairpin of Cmr3 binds the D1 domain of Cmr2, as observed in the Cmr2-Cmr3 complex structure. Furthermore, it is suggested that the hairpin of Csm4 is responsible for the interaction with Csm1 (ortholog of Cmr2).	1.27168e-34
CP027570.1\|AVO73599.1\|156248_156998_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.22346e-15
CP027570.1\|AVO73615.1\|173056_174121_-\|ATP--guanido-phosphotransferase	gnl\|CDD\|234894	PRK01059, PRK01059, ATP:guanido phosphotransferase; Provisional.	5.24381e-124
CP027570.1\|AVO73608.1\|165306_166380_+\|NADH-dependent-flavin-oxidoreductase	gnl\|CDD\|239201	cd02803, OYE_like_FMN_family, Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.	1.05286e-117
CP027570.1\|AVO73602.1\|159183_159867_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|274212	TIGR02582, CRISPR_type_III-associated_RAMP_protein_Csm3, CRISPR type III-A/MTUBE-associated RAMP protein Csm3. Members of this CRISPR-associated (cas) gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm3, for CRISPR/cas Subtype Mtube, protein 3.	7.27573e-75
CP027570.1\|AVO73610.1\|166724_167930_-\|aspartate-aminotransferase	gnl\|CDD\|224090	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].	4.43256e-115
CP027570.1\|AVO73603.1\|159869_160250_-\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	1.56167e-24
CP027570.1\|AVO73605.1\|162845_163151_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.09423e-22

>CP027570.1|AVO73606.1|163159_164155_-|CRISPR-associated-endonuclease-Cas1
MSFAYITEKGATISKKDGRFVVGRNHETLLEIPEETLEGLLVTDTVQLTSHAIVSLLHLGIPVTWLSSHGKYFGRLESTRHVSVFKQKQQFLLQDQPFSLEMSRRVLLAKVHNQLTLLRRYNRDRKIPSVMIDIHNMMTMADHLKIAEDCESLMGYEGMAAKIYFSALGKLVDPTFAFEKRSKRPPLDPFNSLLSFAYTLIMYELFTAITNEGLHPYVGFLHTLKEHHPALASDLLEEWRAVLADSFVMSLVQHHEIKEEHFCCDEANHGIYLTPEGRKIFFRAYEKKMRSINQYIDGKHSFRRSLNYQVAQYGQALMAREPKLYEPIWIR
>CP027570.1|AVO73605.1|162845_163151_-|CRISPR-associated-endonuclease-Cas2
MKNSQTESVDDKKYIVLIIYDITDNKTRNKMVACLEKYGVRVQKSAFEAYITKRKYHKLMQEAPFLIDTDTDSLRIYLLDSYMAVHSWGRGDTHTEDVIIL
>CP027570.1|AVO73604.1|160267_162790_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MSYGKELRWLPVTEIDLEKAALLHDIGKLYQRAGEIRKSHSVVGQEILAHFFDANHQAILRAVACHHQNELQTNHLPDDDISYIVYEADNLAAASDRRTLMLEGAQTGKGMHFVSDLPLGSIFNIFNRKGDTDQSAYRLEGIEESKGWPYSDNRNEIAAPSTSYEKLATALTDIFKKRSPQDMTLSELLQALEKTLSYVPSSTNTVEAADISLYDHQKLTAAFAVCLWHVFQERGITDYKSYCYGKKQKTLRTAPAYRLASGDISGIQKFIYTIPSKGALKSLRGRSLYLDILLEHIVDEILEACHVSRSCLLYTGGGHFYLLLPNTVHTQEVLQKADTAINGWFLRHYGTNLYIALASVSCSAADFSVHGGGAGKVFQKVSQALRQKKLCRYNQEQLTALFDAHSVYNENTDGSRECAICHTASSAADLRPYGDDTDEGAEEACKACNALFQLGKSSLTASVFAISASAGRQGVPLPGLSQDYYLQTIREENLSTMDRPKRIYVKNELTLGQAVSTHLWMGDYVTCNEQGHAVEFTELAQQSGGSREDTGIARIGVLRCDVDNLGAAFIAGFSPEYDTLSRKVTLSRNLSLFFKQYIKTLCQGHTASGVSEFTLFADEIKKERKIHVIYSGGDDMFLAGTWDDILEAAVDIRHAFRRFTNGKLTFSAGIGFFHPSCPIAQMARKTGDLEDYAKANPHHDKDSLALFGEVSQPAGKGSVVMTARYSWDDFEQGVCQEKLRFLERNLTLQKENPSKLFVGKTALYRLLDLLRQAEADSSHIQLARFAYTLARMEPKQRDSGKWRCYQALRTTLYDWYQSTADRQQLMTAIELLIYHVRDKE
>CP027570.1|AVO73603.1|159869_160250_-|type-III-A-CRISPR-associated-protein-Csm2
MQDIAKEAEQAILALKKQNNGKIYLKTNQIRKFLTAVNAITNKVNVYKAKHLDATELPDELAGEIQFLKVKAAYQAGRERSVKDFMKQSNMKQHIEAVGTSIAKYEAFAHYVEALVAYHKFYGGKD
>CP027570.1|AVO73602.1|159183_159867_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MAQEKLCGKLKMTAKLRLETGLHIGGSDEFAPIGAVDSAVIRDPYTKEPIIPGSSLKGKIRSLLRRNQGGLNLETESPVVKRLFGTADKQAATPARLQFLDIRMDENSVKAMEQMEMDTYLGEIKFENSINALTGEANPRQIERVPAGAVFNFQLIYNISNIEQVAEDLQALIDGIRLLTWDYLGGHGSRGYGRVAFSCWDVQGFSGLSDTDVQPFVDEALQLLKEV
>CP027570.1|AVO73601.1|158169_159180_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MKYALYPLQFDTPVHFGCAENGGKLEQSSLNYRADSLFSALCYELSLQGDEKGLTHLQEAIVKGKLVFSDLFPYIYDDTEELQLYVPKPILSIPAESRQETVDYDTFRRQATQQKRQKKLSYIRISQLADFIQAMKAGKSFCSDEPCFGCGQLLTRVNCTEAVPRPYYVHQIQFTEEAGLYGLVGYEDDEDWDWLQSLLELLGFSGIGGKRSSGYGKFHFRDDPIDMDELGVYEDDRILYKGLTMSNASMYMCLSVLLPTPAEVIDVQEGQYALCRRSGFLSPDGGRMQKKNDIYMIQAGSCFPKKLAGCMAEVGGQDAVHPVWRYGKGLYVGVML
>CP027570.1|AVO73600.1|156991_158173_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MINAEKWEHKTYELTCISPIHVGNGEVLKQYEYIFTKDRNQQRVYFLDKAKWMNFLIRHHLIDDYASQVFSGKMNLRGWLQAQRLGSLSTIIREICISSADVYLVRDVKQRLNDIHRQVKTPDGTPYIPGSTLKGAIRSAILFHDIRQHPDDYRLFWSRIKAAMKARERDRYDKQMGHLVQAIERKAFARLKQYKNQPDDALQSVMKGLSVSDAMLVGHERDTVILQKYDVSAVCREGLDGHSLALFRECIPAGRKFRFSMTLDRDIAKRIGITTLDDIWQWVRDYLAFGLAQEKAVFGHEYKGKFEESKLADIRLGGGTGFLTKTVYYALAPKEEGRTVLAEFFDKVLFTRRSCHHHMTKDDKLTPRTLKLAWVHDDCQILGLAAVKEVASC
>CP027570.1|AVO73599.1|156248_156998_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MLRLIEIPLKMPEHTRIHPAMGSIFHGALMDVIAPTSAELYHHMTLRPYSQVVYWDETKHCPLWRIGTLTDEAYERLVIPLEKVPALWLKQKQYEVSLGPMQLLRQTSFEDLAAQFVKADSAPAGAEWQCLSIMSFKQEGRYVILPDIRLIYQSLLQRWNTFSDTVKLEQDDLLEQLTSHCRLTKYQLRSQVFSVNGSQIYGCEGWQRFSFFGYDMLKRLQGLLASLAPFSGVGVKTALGMGAVDTTVL
>CP027570.1|AVO73598.1|154882_156235_-|hypothetical-protein
MKILFSPIGTTDPVRNCRDGACLHILRYYHPDKVVLYFTAEMEKRERNTHMYTLGIEHVQPGCPVESLYSGIVDAHLYDAYLHDLPGHVLKLHQIYPEAEILLNLSSGTPQIKVVLAIMSTEYAWCRGIQVASPEHRSNTNNIPVQDEEDVEEMLACNEDDEPDAPNRCEEPHLEILRFYREKYEIMSLVNQYEYMGAWAFCKGSHTISAQTKKLIQFAMYRSDLQTKAAQQIMRKYHGQALFPFEREGESLTEYLLTMQIHKEKKQYASFMVQISPFLYELFVTYAKMNLKIPLLNYREKVAGRRILRRQTLLQKPQGPELIAYLDHVWPQPFYDSELSFILLYQVFCFAEQFDGAKDAEKHHEFMTDPLMNSANPYMDKLRKLRNNTAHEIINVTEETIQKRTGLTPDDIMTSFWNLLSIIYGSPVNRQRMAYKRLNQWIGESLLINL
>CP027570.1|AVO73597.1|151199_151400_-|hypothetical-protein
MSCDIIKKDKVVFAGLMMYNGERTMIKRNFSLKKIHGQWPLCRGFHVGNLLERIYHSLFWGFDGPL
>CP027570.1|AVO73607.1|164790_165174_-|transcriptional-regulator
MAKKPLPKEKNIYETDCPILYAMKMIGQKWKLPILWYIADAENQTLRYRELERKVVGITATMLTKCLRELEQDKFITRKQYSTIPPTVEYSLAERGKTLIPALESVYQWADDQMKKENKIQTSDSLS
>CP027570.1|AVO73608.1|165306_166380_+|NADH-dependent-flavin-oxidoreductase
MKKIFGSAALKNIPLKNRLIRSATWEGIANPDGSVTETAYEIYKELAKGGVGAIITGFTSVALHDYYFGGMMRLCDDSLIPQYKKLTDIIHAEGIPVITQLALGAYYREVKGRFMQVEPDDMTSDEIQYVIRQFIDAAIRAEKAGFDGVQIHAAHFFFLSRFISPAVNHRTDEYGGSTKNRSHILLDIMNGIRKAAPKLHITIKINSSDFTHGGIEELECLAICQLLDQAGIDSIEVSGNGTSVSGIKAHVNEGYFVPVAAKIAKRVSCPVIVVGGFRSLDGMESVLNQTDIAFISLSRPLLREPDLPNKMKADSTIVSQCVSCNACYSSQAHKCVFRKRNTLWCFDSMSRQKEVPS
>CP027570.1|AVO73609.1|166427_166664_+|alpha/beta-hydrolase
MIAITGIHGNFYSNPFYYNIGDTLNSDNIDFIYAQTNDAFGQMETVNVNSGKKEIIGSWNERFSYADEDIDAYLSFAE
>CP027570.1|AVO73610.1|166724_167930_-|aspartate-aminotransferase
MKYDFTTIIDRAGKDATAFDGIGKTVWGFEPDKAKPGFDEIPMWVADMSFATCPAVVQAMEQRLKHPLFGYFLPSDAYYQRIIDWQTTRHDWPELTRDMIGYENGVHGGITSTIQVLTEPGDAVLVHSPTYPGFIGDLSNTGRHVVFSPLRKEQGIWRMDFADMEEKIKKHHVHLAIFCSPQNPTGRVWERWEIEQAMALFKKYDVLVISDEIWSDIIFQGHCHIPTAAVSEDARQRTVAFYAPSKTFNLAGLIGSYHIIANPLLREKITQHGQRTCYNEMNVLSMHALIGAYSQDGHEWTDELNQVLESNCRYAVQYIQDHFPGCQVSLPQGTYMLFVECGEYLKANQMTLPELLKKAWDVGVAWQDGRKFAWKDAMRLNLALPRTRLEEAMRRLSEYVF
>CP027570.1|AVO73611.1|168045_168342_-|hypothetical-protein
MVPAHTEWKSRQVEENYVDKDGKLHSFYRTENYPEYVPDHDVPYVTVGVQFQWFDTKTGKLVASSEDVRRRNSESNPSSVYNRIIDRFYKNMKDTLEK
>CP027570.1|AVO73612.1|168352_168682_-|hypothetical-protein
MRKWIYVALVTLCFFCLSGAVLAASAVTPDGYFNGIRLAGKVRVVHSFPDIRVQVVSAFPDLRVQTVNYFPDDIGQWQFVDYGEDFTVQFVDSFPDIRIQFVNSFPGVP
>CP027570.1|AVO73613.1|169227_170607_-|DNA-repair-protein-RadA
MAKRKTRYVCTNCGSVSSRWLGRCPQCGEWNTMTEETVEPEAPKAAQSMARSGPASQAASLADIAMEDMARMETGIGELDRVLGGGIVPGALILLSGDPGIGKSTLVLQLAAAVCEKNGSVLYGSGEESAGQIKMRAQRLGISTPQLIIQADTSLDNILDEAKRRRPALLVVDSIQTMYSRDIEGTPGSLAQIREGTSRLMTFAKSEGIPVVVIGHVTKDGAIAGPRMMEHMVDVVLYFEGERNYQFRILRGIKNRFGSTNESGLFTMTSGGLSELENPSQLLLAERAADQAGSAVAAVLDGMRPMLGEIQALTAHSVFAVPRRTASGMDYNRLIILLAVLEKRLGVPLGSQDVYINVVGGLRLTETAADLPVALAVYSSLRDISMDSRTVVMGEVGLTGDIRRVPQALRRVKEAAKMGFNTFILPKGNLEDIEKDKFPDCHFLGVATLREAIEKAFRR
>CP027570.1|AVO73614.1|170616_173049_-|ATP-dependent-Clp-protease-ATP-binding-subunit
MMNNRLTNDAKAVLQYAQEAAQKFHHDYVGTEHILLGLVLNTDGIAGLLLNQLGLTPENVTRAIEQHVGWGQDTPSKLRLTPRTKRAMELAVREANRLEQNYVGTEHMLAGILEEGSGMAVQILEDMDIDPDLVSQRLSELMNDPAVEGGDAVAAKNGSDLSQFGRDLNEWAKKGKIDPVIGREKEISRVIQILSRRTKNNPVLIGAPGVGKTAIAEGLAQRIINGNVPDSLLDKRIFSLDLASIVAGTKYRGEFEERIKRILDVIEQDDTIILFIDEIHQLIGAGAVEGAMDAANILKPALARGDLQCIGATTIDEYKKHFEKDAALARRFQPVLVGEPTEDDAMAILFGLRDRYEAFHKARITDDAVRAAVKLSARYISDRYLPDKAIDVMDEAAARVRMKVYAPSHELQDLEQKLADINKEKEAALAGEDFEKCASLRDAGKKVSSEISALQKEKKQHDDEKLVVTENDIADVVSMWTGVPVQQITETESQRLLHLEEELHKRVISQDDAVTAVAKAVRRARAGLKDANRPIGSFLFLGPSGVGKTELARTLAAQLFGSADNMIRIDMSEFMEKYSVSRLVGAPPGYVGYEEGGELTDAVREKPYSVILFDEVEKASSDFFNLLLQVLDEGRLTDSKGRTVDFRNTVIIMTSNLGASHLKPSGPVMGFSTGGDSAKDREASFEVAKKEIMADVKRFFRPEFLNRIDEIIVFKPLEQKDLRQIVDILLQDLTKRLGEKGVAMDWTTAADDILVKEGTDFAYGARPLKRAIQKLVEDPISEMLLSGDVKDGNTIHVDSLDKKKLVFTTE
>CP027570.1|AVO73615.1|173056_174121_-|ATP--guanido-phosphotransferase
MAHDMLQQPLCPWQDGTGKFNDIVIDSRVRLDRNLKKYVFPDKASDTELAAVLEEGKRQIGPLDTLGHGRYTFIGLEELSPMEREMMAVKHFSSAGHIEHPKHRGVLLRDDGAVSIMLNEEDHLVIQTAAPGFDLQRVWDQAAQVDDALESHLDFAFRDDFGYLTASPSLTGTGLTAGVTIHVPALVMMKRFNRIVQGITKFGFTVSGMYGERNECIGNIFQITNQITLGVTETDILDQLSKIVTQIVQEEQNCRSLVWDHNENTLKDKWLRTYGTLSQAWLLSDQESLALASDLRFGIDMGVIPEQPLAYEAIMTVVEPAYLQLKAGAELNDEELQHQRAQAVQSVLAAYRRK
>CP027570.1|AVO73616.1|174124_174640_-|DNA-helicase-UvrB
MLCDACKKREAVVHIVKIENGRRTDLHLCAACAKKQTNFSNFRDLNIIDNDFFRKMAYPDYQGRSGDEPRCASCGMTYSEFNRLGKFGCPDCYEAFKEEIPPLLRRIHGHSKHVGKVPNRGTGVFRTATHVKRLRQHLQKLVQEERYEEAAKVRDEIRALQRQLPDGGKGE

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Crispr_ID: CP027570_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027570_3

477847-477970

TypeV-U3

Consensus_repeat	Method
TCCGTAGGGGCCGTCCTGTAAAGGCGGCCCGC	CRISPRCasFinder

1 spacers

c2c10_CAS-V-U3

The CRISPR arrays of CP027570_3

>merge|CP027570|3|477847-477970|CRISPRCasFinder
TCCGTAGGGGCCGTCCTGTAAAGGCGGCCCGCTACGCGCCGAGGGCATCCCGAAGCGTCGTTGTCAGTGTAAGGTGCCGTTGTGCAACGGCATCCGTAGGGGCCGTCCTGTGAAGGCGGCCCGC

>CP027570|3|3|477847-477970|CRISPRCasFinder
TCCGTAGGGGCCGTCCTGTAAAGGCGGCCCGC	TACGCGCCGAGGGCATCCCGAAGCGTCGTTGTCAGTGTAAGGTGCCGTTGTGCAACGGCA
TCCGTAGGGGCCGTCCTGTGAAGGCGGCCCGC

Protein	Signature genes	Signature genes Name	Protein_function
CP027570.1\|AVO73861.1\|467839_469657_-\|adenylate-cyclase	unknown	unknown	gnl\|CDD\|223083
CP027570.1\|AVO73858.1\|463815_464796_-\|sensor-domain-containing-diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
CP027570.1\|AVO73874.1\|487028_487619_-\|DivIVA-domain-containing-protein	unknown	unknown	gnl\|CDD\|377456
CP027570.1\|AVO73870.1\|483465_484812_-\|YvcK-family-protein	unknown	unknown	gnl\|CDD\|211689
CP027570.1\|AVO73864.1\|471151_471985_-\|hydroxyethylthiazole-kinase	unknown	unknown	gnl\|CDD\|238575
CP027570.1\|AVO73857.1\|462840_463623_-\|carbon-monoxide-dehydrogenase	unknown	unknown	gnl\|CDD\|224238
CP027570.1\|AVO73859.1\|465046_466114_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|119353
CP027570.1\|AVO73856.1\|462373_462841_-\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|224991
CP027570.1\|AVO73863.1\|470847_471147_-\|thiamine-binding-protein	unknown	unknown	gnl\|CDD\|376658
CP027570.1\|AVO73862.1\|469814_470591_-\|TatD-family-deoxyribonuclease	unknown	unknown	gnl\|CDD\|223162
CP027570.1\|AVO73872.1\|485752_486553_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|319818
CP027570.1\|AVO73866.1\|479629_480274_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223620
CP027570.1\|AVO73873.1\|486539_486941_-\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO73869.1\|482516_483452_-\|DNA-binding-protein-WhiA	unknown	unknown	gnl\|CDD\|224398
CP027570.1\|AVO73860.1\|466260_467487_+\|transposase	c2c10_CAS-V-U3	-	gnl\|CDD\|223747
CP027570.1\|AVO73868.1\|481219_482527_-\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO73871.1\|484823_485729_-\|RNase-adapter-RapZ	unknown	unknown	gnl\|CDD\|235450
CP027570.1\|AVO73865.1\|478843_479626_+\|basic-amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270342
CP027570.1\|AVO73867.1\|480288_481077_+\|basic-amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270342
CP027570.1\|AVO73855.1\|460088_462374_-\|aldehyde-oxidase	unknown	unknown	gnl\|CDD\|236637

Protein	Function_ID	Function_description	E-value
CP027570.1\|AVO73861.1\|467839_469657_-\|adenylate-cyclase	gnl\|CDD\|223083	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism].	1.854e-152
CP027570.1\|AVO73858.1\|463815_464796_-\|sensor-domain-containing-diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	3.10364e-26
CP027570.1\|AVO73874.1\|487028_487619_-\|DivIVA-domain-containing-protein	gnl\|CDD\|377456	pfam05103, DivIVA, DivIVA protein. The Bacillus subtilis divIVA1 mutation causes misplacement of the septum during cell division, resulting in the formation of small, circular, anucleate mini-cells. Inactivation of divIVA produces a mini-cell phenotype, whereas overproduction of DivIVA results in a filamentation phenotype. These proteins appear to contain coiled-coils.	1.18471e-36
CP027570.1\|AVO73870.1\|483465_484812_-\|YvcK-family-protein	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	3.92616e-147
CP027570.1\|AVO73864.1\|471151_471985_-\|hydroxyethylthiazole-kinase	gnl\|CDD\|238575	cd01170, THZ_kinase, 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz. A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate.	2.65474e-82
CP027570.1\|AVO73857.1\|462840_463623_-\|carbon-monoxide-dehydrogenase	gnl\|CDD\|224238	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion].	5.60666e-32
CP027570.1\|AVO73859.1\|465046_466114_-\|hypothetical-protein	gnl\|CDD\|119353	cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.	1.6037e-19
CP027570.1\|AVO73856.1\|462373_462841_-\|(2Fe-2S)-binding-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	1.53592e-41
CP027570.1\|AVO73863.1\|470847_471147_-\|thiamine-binding-protein	gnl\|CDD\|376658	pfam01910, Thiamine_BP, Thiamine-binding protein. The crystal structure of two of these members shows that this domain has a ferredoxin like fold and is likely to exists as at least homodimers. Sulphate ions are are located at the dimer interfaces, which are thought to confer additional stability. Although the function of this domain remains to be identified, its structure suggests a role in protein-protein interactions possibly regulated by the binding of small-molecule ligands. Solution of the structure of the hyperthermophilic anaerobic Thermotoga maritima sequence, UniProtKB:Q9WYV6, shows that this has a beta-alpha-beta-beta-alpha-beta ferredoxin-like fold and assembles as a homotetramer. It was possible to identify a pocket in each monmer that bound an unidentified ligand. It was also found that it bound charged thiamine though not hydroxymethyl pyrimidine. It is proposed that it is transporting charged thiamine around the cytoplasm. Under oxidative conditions this bacterium is under stress, and the transcriiptional unit within which this protein is expressed is up-regulated in these conditions, suggesting that the chelation of cytoplasmic thaimine is part of the response mechanism to such oxidatvie stress, which is mediated by this family.	6.28163e-30
CP027570.1\|AVO73862.1\|469814_470591_-\|TatD-family-deoxyribonuclease	gnl\|CDD\|223162	COG0084, TatD, Mg-dependent DNase [DNA replication, recombination, and repair].	1.00868e-71
CP027570.1\|AVO73872.1\|485752_486553_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.37917e-77
CP027570.1\|AVO73866.1\|479629_480274_+\|HAD-family-hydrolase	gnl\|CDD\|223620	COG0546, Gph, Predicted phosphatases [General function prediction only].	4.26167e-47
CP027570.1\|AVO73860.1\|466260_467487_+\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	8.47479e-21
CP027570.1\|AVO73869.1\|482516_483452_-\|DNA-binding-protein-WhiA	gnl\|CDD\|224398	COG1481, COG1481, Uncharacterized protein conserved in bacteria [Function unknown].	2.47085e-80
CP027570.1\|AVO73871.1\|484823_485729_-\|RNase-adapter-RapZ	gnl\|CDD\|235450	PRK05416, PRK05416, RNase adapter RapZ.	1.4083e-154
CP027570.1\|AVO73865.1\|478843_479626_+\|basic-amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270342	cd13624, PBP2_Arg_Lys_His, Substrate binding domain of the arginine-, lysine-, histidine-binding protein ArtJ; the type 2 periplasmic binding protein fold. This group includes the periplasmic substrate-binding protein ArtJ of the ATP-binding cassette (ABC) transport system from the thermophilic bacterium Geobacillus stearothermophilus, which is specific for arginine, lysine, and histidine. ArtJ belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	8.17446e-102
CP027570.1\|AVO73867.1\|480288_481077_+\|basic-amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270342	cd13624, PBP2_Arg_Lys_His, Substrate binding domain of the arginine-, lysine-, histidine-binding protein ArtJ; the type 2 periplasmic binding protein fold. This group includes the periplasmic substrate-binding protein ArtJ of the ATP-binding cassette (ABC) transport system from the thermophilic bacterium Geobacillus stearothermophilus, which is specific for arginine, lysine, and histidine. ArtJ belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	6.88095e-96
CP027570.1\|AVO73855.1\|460088_462374_-\|aldehyde-oxidase	gnl\|CDD\|236637	PRK09970, PRK09970, xanthine dehydrogenase subunit XdhA; Provisional.	3.02767e-178

>CP027570.1|AVO73864.1|471151_471985_-|hydroxyethylthiazole-kinase
MTESEIRDAVREAAKLAKASNPLTPSITNTVTINFVANAQLAVGGSAAMVYLPDEGVSMAKAGAAMYINVGTLFPIYAETLPKTAAVLHEEGKPWVLDPVAIGMGQMRTDLLMTFKDYKPSIIRGNASEIIALAGLWGLEGGTDTSDVRGVDSTDSVRSAAHAAAALAQWTGGAVAVSGEEDLITDGRQIVLSQGGSEMMPCITGTGCSLGGVMAVYAAVADPFIAAITGAAVYNLAGTKAAAHASGTGSFQTAFIDELYIATPDAIAQNPLAVEEV
>CP027570.1|AVO73863.1|470847_471147_-|thiamine-binding-protein
MNTLIAVAIAPCGTGDEFAPYVAEIVRIIRESGLPNRTNSMFTEIEGEWDDVMAVVKKATQYLTDQGLRAEVVLKADIRPGYTNMMNNKTKAVEDILKK
>CP027570.1|AVO73862.1|469814_470591_-|TatD-family-deoxyribonuclease
MDIKYYDIGLNLFTRSFPKPEKIIADAAADGICCILTGSEARENRLVDQFVRNHTAFGTAGIHPHVADEATDADLEEIRRIVMTNPKVVAVGETGLDYDRMYSKKENQLHFFKALIAMAEELDKPLFLHERDAADDFLACFKGHEAICPKSVVHCYTGDKKTLAKMLDLGFYIGITGWICDERRAAPLRDAVSILPLDRVLIETDAPYLTPRGFHLPRTNVPNNITYVARTLAGYMDVSVEELIAHAKENTEKLFKLP
>CP027570.1|AVO73861.1|467839_469657_-|adenylate-cyclase
MGKFRRILRRGSLAAVLTCSPLAALAAEAEPGRYSSVDTIWILLGAALVFFMQPGFAMLETGLTRAKNAGNIVMKNFMDFALGTVFFWFLGFGLMFGTDFHGIIGIPDPFVQNFHVADDAGFPDMAFLIFQTVFCATSATIVSGAMAERTKFSVYCIYSVLISLLIYPISGHWIWGGGWLQELGFHDFAGSTCVHMVGGVCALVGAWILGPRIGKYNKDGSVNAIPGHSLPLACLGMFILWFGWFGFNGCSTVSMTGDETLVSASMIFVTTNMAAAAGACTAMIVTWIHYGKPDVSMTLNGGLAGLVAITAGCDAVSVTGAFIIGVISGAVIIFLIEFIDQKLKIDDPVGAVAAHGGCGALGTILTGLFSVKDGLLYTGETHFFLIQVLGVCVVALYVFVAINIVFRILNATMGLRVTAEEEINGLDLEEHGIASAYAGFMITPDTVTQAIDAGKAPADAVEVPLDKPEAAPSAVTVTSMPADGHHLYNVTIITDEKRFEPLKAAMEAIGITGMTITRALGFGIEKGRPEMYRGAKVSAKLLPKVRVEMVVSKISPRKIIDVAKKVLYTGKYGDGKVFVSTIDNAVKIRTGEEGYEALQDYPINK
>CP027570.1|AVO73860.1|466260_467487_+|transposase
MSNLTKTIKLRIHATSEQEFLFRQMTEQYRQACNFVSQYIFNNRFNMAYQSLNRELYSDLRSQFGLKSQLAQSSIKTTIARYKTVKQQLFQNPYRYKDRNGNWQRITKTLEWLWKPVFFSRPQADLVRNRDYSFVNDGQILSINTLGKRTKCTFEGEHFAEYLDGAYDLGTAKLVELKGLWYLHIPVTQAVEDFQKENVRHVVGIDRGLRFLTVSYDEQGKSEFVSGKKMATKRHKFQEVRRQLQSKGTKSAKRRLKAISGRENRWMSDVNHQISKTLVEKYGKDTLFVLEDLTGVSFEESHLSKTAKQNYDLRSWAFYQLEQFLTYKAHENRSEVLTVSAKYTSQRCPKCGTIHKENRDHHRHLYSCQCGYKSNDDRIGAMNIQLLGTMWISGNNNPRYERITTASE
>CP027570.1|AVO73859.1|465046_466114_-|hypothetical-protein
MMKILSGAVAAGIILVVAGAVSLMVPSTSAAKQRPQPTFDNNAWIAYWDYDKGLKEAKDISSQLNSVSYFGGALDRQGQVIVLGPAKAFAAEKLPRYKVTVKKYLTVVNDVYDNPQDPKGQTKVKDTSILETILATQASRQAHIDDLFRTMKAYGYDGLEIDYEQVWKNPLVAFRYVKFIQEIAAAADEQQVPLRIIFEPSVPANKLIFPEGPEYVIMCYNLYGTHTKDAGPKADPDFINTVLGRVDRLPRPHSIAFATGGCIWESGQSPRMVTEGEARELAKSLHAKVQREPSSQALQFEGHRADGTAVTGWYGDSETLRAWKQQALEHGVDGISLWRLGGNDHIRTYYVGLMP
>CP027570.1|AVO73858.1|463815_464796_-|sensor-domain-containing-diguanylate-cyclase
MYCNQKKMMTLIAILQDAVCQAMTNDDPDDILFSFVARIGSFLGAGKAFLFDDTPIHFYCWTPDGMTYDTDRVIPNEDRQKLRGWFKDLASRGHPVFIANTADWPDLDSSIKEHMHRAHIHNVAAMAFFMPGNRIGAIVLENIHPDAREQADELLRLAGSFLLVLLKGRDHIYQMRNHSFIDQMTGVSNRNAFDAYQQHVNCQVSMGVLFADINNLKKTNDEEGHASGDRLICHTASILQQYRHGGEVFRIGGDEFVIIWQHVEERDFHQACCQIRRQIASQNLNIALGYHWVAEAIQGLPPVLQAADKHMYEEKRRYHRRQVIRP
>CP027570.1|AVO73857.1|462840_463623_-|carbon-monoxide-dehydrogenase
MNIAQYTKAASLEEAWKLKQKRSAVVLGGCCWLRLSPQRRIAQAIDLSGLGLDQIEEGDDVFRIGAMVTLGQLEGHEGLAAFTQGAMKEAVRHIVGTQFRNMATVGGSISGRFGFSDIWTLFLALDAQVELYKGGAVSLADFGQTGPGTDIVTQVVIPKKACQTAYDSLRLNETDFPVIAVAVSADAEDVRCAIGARPARAQVLCQSVSDVRRQGLEGAAEKMAGSLNYESNMRGSADYRHDMAVVLCRRLLTKVLGGDQ
>CP027570.1|AVO73856.1|462373_462841_-|(2Fe-2S)-binding-protein
MTITYWLNGKKATADVAPGLMLYDFLRSQGCYSVKCGCETTNCGLCTVWVDDVPVLSCAMLAVRIDGCHVTTLEGLQDEAKEFALYMGREGADQCGFCNPGFVMNVLAMVRKLDAPTEDEIKEFLSGNLCRCTGYISHMRAIKAYFKAKGKEVRA
>CP027570.1|AVO73855.1|460088_462374_-|aldehyde-oxidase
MEYKVINHGVAKKDSQALVTGQPVYTDDLRPKDCLIVKALRSPHARAIVKNVNKSAAEKVPGIVCIVTADDVPQSRFTIAGQTYPELSPYDRLILDKQIRFVGDPVALVAGTSEEAVDRALRVLRVEYDVQEPLLDFTKALDNDIVVHPEDNWNPLVDVGGDNKRNLVAQACDEHGDIDAVLASSDVVIDRTYHTRQNQQGAMETFRAYAYKDAFGRLTIVSSTQVPFHVRRIVANALEIPKSKIRVIKPRIGGGFGSKQTAVMEVYPAYIAWLTGKPAYMIYSREESMTVSTPRHESQIRVVLGASKDGHIRGIFVDSLWNAGAYGEHTPTTVTLSGHKSIPLYNAAEAFRFSYTCVYTNTIAAGAYRGYGATQGLFALETAVNELAAALHMSPVALRLKNLVRQGQVMPAYFNETALSCTLDKCLERVVQMSGWHDDCPRQVLPNGHIRAIGIAAAMQGSSITNVDVASVTIKVNDDGFYSLNIGATDMGTGCDTILAQIAAECLLCPVDNIVTYGVDTDTSPYDSGSYASSTTYLTGNAVVKTCQSLIQRMKERAAVKLGSAGIDNLEFDGQAITDLATGKKITIKDLGNDAMFMNDIALEATESCYSPTSPPPYMAGAATVDVDPETGHISLVQYDAVVDCGTVINPALAKVQTEGGIVQAIGMALTENIQITPSGRIQNNSFMQYRMPTRMDLGQINVEFEPSYEPNGPFGAKSIGELVIDSPAPAIAHAIYNATGIWLRDLPMTAEKLYKAMRKK
>CP027570.1|AVO73865.1|478843_479626_+|basic-amino-acid-ABC-transporter-substrate-binding-protein
MNKKCLALAAAAMAAVTLVAGCGSSADKKDGASGEQKTLVVGTEPTFPPFEFTENDKYIGFDIDLANAIGEKMGSKVEVKSLGFDALIPALRSGQIDMIASGMDATPERQKQVSFTDPYFHDGYSVVVRKDNTTINGFDDLKGRTVGSQVGTKGVDLATEAGATVKQYDANSQGWMELQSGTCDAVVINTSVALYYMKEGGDKDLKIVGDAKKADAGIAMAVSKDKPELLEKVNKALADLKADGTYAKLYKKWFGIDPKE
>CP027570.1|AVO73866.1|479629_480274_+|HAD-family-hydrolase
MYKAYVFDFDYTLANSEKGIVMCFQLLFEAEGYDGIHEEAIRRTIGMTMYDAMASLTGETDPARIQALTTEYKVRFSDKYMTANTHLYPQTLPTLRALKESGALCCIVSTKTRSRIGETLRKYQMESLIDLVVGMEDVAQAKPAPDGINAVCRHFGLDKKDVLYIGDNTIDAKAAQNAGVAFAAVTTGTTTSQEFAPLPHVAIMKDLSEILTIP
>CP027570.1|AVO73867.1|480288_481077_+|basic-amino-acid-ABC-transporter-substrate-binding-protein
MMKKKVTTLVAASLAALTLLSGCGSNGTADKKDGAAKGDKTLIVGTEPTFPPFEFTENEKDVGFDIDLAQAVCDKLGYKMEVKNLGFDALIPALKSGQIDLIAAGMDATDERKKQIDFTDVYYQGGYTIVVPTGNTDITGYDSIAGKTVGAQVGSKAADYAREHGANVKEFDTNTQGWMELEAGTCDAVSIDKAVAQYYLQQGGKDKLKIVGEAITSRGVAMGISKDKPELSKQVNEALKELKADGTYAKIYKKWFGEEPKQ
>CP027570.1|AVO73868.1|481219_482527_-|hypothetical-protein
MKFKKLCTYIAGLLTACLPLASALAADLPAVDDPEVMDRVVAQRMLPISMTAPVDTGTLLLSDSPEYADGDGILYGDMVSGDVRLYFYHVNQHPYNRKIVAMLYNPHPYPLEAVLQGYQYTRPSTDYYQVGKELSTMYYEGNMTVNKITVPAHNYAVVGQRLNETVVRPDQLFSGIVNVSLPEPMILSSMILPPQEDPVAFIRKQQYLASDSVQLRGTFHGKDRYLSTLIPYSTDSGIGYILLADGVWDRFLQGRDVMDNRASEDTGNYGVDYTIHLRTTGNGDVHLYFNPQGGEYAGVTELIYSDPKRGEDKKIVELPRHRHSMGLNDPYAMEYVDTFPAGTDMTIRIMPPGAANLPVRFLVVPDNKLQPIREAVQAERTAKEKRTAAAAEAAKRKAAYKDTTIQPEAELQSDNQGEFTSLKDRLAKLQQKDKK
>CP027570.1|AVO73869.1|482516_483452_-|DNA-binding-protein-WhiA
MSFAEEVKNEIAHCKPENAACRFAELAALLCMGGSLILGSRGTIGIEFSTSNNAVARKALKMWMESFTVRPEVRVRQGLRLRKKNYYILRVTPSPESTAILRDLSLFPTDAEFSAIDLRKADCQRAFLRGAFMGGGSVNQPKGDYHLELVTGNAAFAEKLLKIMRRFHLPAKTTDRKGDYLVYIKEGNGVSQFLQYIGAAQAYLKFESVRVVKGMRNNVNRVVNCETANLQKTVDAAVRQRRAITCIQESGLYPRMSPKLREAAELRMANPEASMSELAAQSGLTKSGLSHRFKKIADIAKQIEGQKKDEI
>CP027570.1|AVO73870.1|483465_484812_-|YvcK-family-protein
MRFMKWLHPGLHIKRWLFLFGLGMMCSSFGIILTFNYQWLGELEEWAFRLLYEMTGHYNYTILASLGILVILLGLVVMAWATRRLIRTMIGVVMPGESENLSDLIFSNLQLSKGPKVVVIGGGTGLSVMLRGLKAKTYNLTAVVTVADDGGSTGRIRQDLDIIAPGDLRNCLVALADKEGLMEKLFAHRFGGSGNLTGHSFGNLFIAALIEVLGDVEEAMDATSKVLRVRGKVIPSSAEKIRLNAEMTDGRIVEGESQIPHAHGKIKRVFTTPEHPKAIQSAVRAIQEADAIVLGPGSLYTSIMPNLCVPDIVQAVRTSKAPKIYICNVMTQPGETDDYTVSDHVKAINRQAGGRVIDFVIANNGDVDPAVLQRYVATGSHPVIIDKKEVSQAGATLILSDLINKENSATHDTKKLANVLFDLINALRTDLSPELLHYYLKRYTFTHR
>CP027570.1|AVO73871.1|484823_485729_-|RNase-adapter-RapZ
MDHFHLIIVTGMSGAGKSHAVQVLEDIGYFCIDNIPPVLIPKFAELCIKGGERVRHVALIADIRGGEFFDAMSQCLKDLKAEGISYEIVFIEASDQALVRRYKETRRVHPLAPHGRISQGIAEERKRLASLRQKADFIIDTSNLKPKQLKEILVKRYAITDSKKNMTVTVVSFGFKHGMPIDADIVEDVRFLPNPYYIDEYRHKSGRVPCVRDYVESFPITQTYKEKWFDMIDFLLPNYEREGKSQLVIAVGCTGGMHRSVCMAEAMYKHLRDNGVDVSIEHRDIQKNDVEEDAPGYEGEA
>CP027570.1|AVO73872.1|485752_486553_-|Cof-type-HAD-IIB-family-hydrolase
MPAIKMITIDLDGTLLRSDGSVSDRTVRTLQAARDKGVVVAIATGRMYQTARPYGERLGLGDSPLLLFAGGLIETLESKKILFQQVIPREWAQELADLARRRGWQLQTYIDDVLRAARDDEWIRDYERITHSKACICGDDFYHVQGDCNKLLSRGGHDDLVARKALIEKTFPGRFNVLFSAPTFLEIMPQGVDKGEGIRRLGELYGIGTDEIMALGDSQNDLDMLKAAGFPVAMANAAEEVKAAAAYVTASNDDDGVAAAVEKFVL
>CP027570.1|AVO73873.1|486539_486941_-|hypothetical-protein
MKRLFLLLAAWCCLGLGTVLAYNPYAPNQFDAVDRHTWEYKAVYDLSKAGLTGAPMERFAPSYNLTRYEVTEMIATAMKNRSRATADQQQEIDKLAQSYADDLRYVTDAAQEANQTPKGVVFDWKEGTLGAGH
>CP027570.1|AVO73874.1|487028_487619_-|DivIVA-domain-containing-protein
MDIHNKEFKRGFRGYSEEDVDAFMNNIAGDYEKVYREYCELKERCDSLQDKLTQYEKMEATMNSTLMLAQQTAENVKVSARKEADLILQEAESKKKQMLDETMMNLQKSQQEWEKLKAQTGAYRAKCRAILTSQLKLLDDMALDGEAAAPVASDKAVAVKPAAAAVAVSAEAAQKAVPDHGSHDGKDAEKDANKAK

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Crispr_ID: CP027570_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027570_4

800111-800253

Orphan

Consensus_repeat	Method
TCCGTAGGGGCCGTCCTGTAAAGGCGGCCCGTTACGCGCTGAGGGCATCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027570_4

>merge|CP027570|4|800111-800253|CRISPRCasFinder
TCCGTAGGGGCCGTCCTGTAAAGGCGGCCCGTTACGCGCTGAGGGCATCCCGAAGCGTCATTGTCAGTTTGAGGTGCCGTTGTGCAACGGCATCCGTAGGGGCCGTCCTGTAAAGGCGGCCCGTTACGCGCTGAGGGCTCCCC

>CP027570|4|4|800111-800253|CRISPRCasFinder
TCCGTAGGGGCCGTCCTGTAAAGGCGGCCCGTTACGCGCTGAGGGCATCCC	GAAGCGTCATTGTCAGTTTGAGGTGCCGTTGTGCAACGGCA
TCCGTAGGGGCCGTCCTGTAAAGGCGGCCCGTTACGCGCTGAGGGCTCCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP027570.1\|AVO74120.1\|791063_791819_-\|nitrogen-fixation-protein-NifH	unknown	unknown	gnl\|CDD\|349759
CP027570.1\|AVO74118.1\|788725_789760_-\|nitrogenase-molybdenum-iron-protein	unknown	unknown	gnl\|CDD\|365905
CP027570.1\|AVO74127.1\|803068_803851_-\|crotonase	unknown	unknown	gnl\|CDD\|180270
CP027570.1\|AVO74134.1\|811873_813919_-\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|372305
CP027570.1\|AVO74129.1\|805936_807520_-\|3-oxoacid-CoA-transferase	unknown	unknown	gnl\|CDD\|227016
CP027570.1\|AVO74128.1\|804168_805629_+\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO74124.1\|794060_794309_-\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO74122.1\|792420_793677_-\|glutamate:protein-symporter	unknown	unknown	gnl\|CDD\|234968
CP027570.1\|AVO74116.1\|786000_786210_-\|HypC/HybG/HupF-family-hydrogenase-formation-chaperone	unknown	unknown	gnl\|CDD\|376549
CP027570.1\|AVO74133.1\|810540_811884_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379224
CP027570.1\|AVO74131.1\|808983_809496_-\|ferritin	unknown	unknown	gnl\|CDD\|153113
CP027570.1\|AVO74121.1\|791828_792080_-\|iron-only-hydrogenase-system-regulator	unknown	unknown	gnl\|CDD\|274882
CP027570.1\|AVO74130.1\|807648_808650_-\|cobalt-chelatase	unknown	unknown	gnl\|CDD\|368778
CP027570.1\|AVO74115.1\|784942_786001_-\|hydrogenase-formation-protein-HypD	unknown	unknown	gnl\|CDD\|376666
CP027570.1\|AVO74132.1\|809598_810513_-\|polyphosphate-kinase-2-family-protein	unknown	unknown	gnl\|CDD\|274737
CP027570.1\|AVO74119.1\|789756_791067_-\|oxidoreductase	unknown	unknown	gnl\|CDD\|365905
CP027570.1\|AVO74125.1\|801142_801493_-\|desulfoferrodoxin	unknown	unknown	gnl\|CDD\|239421
CP027570.1\|AVO74126.1\|801796_802945_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173847
CP027570.1\|AVO74123.1\|793851_794058_+\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|224559
CP027570.1\|AVO74117.1\|786441_788724_-\|carbamoyltransferase-HypF	unknown	unknown	gnl\|CDD\|223146

Protein	Function_ID	Function_description	E-value
CP027570.1\|AVO74120.1\|791063_791819_-\|nitrogen-fixation-protein-NifH	gnl\|CDD\|349759	cd02040, NifH, nitrogenase component II NifH. NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.	1.90343e-136
CP027570.1\|AVO74118.1\|788725_789760_-\|nitrogenase-molybdenum-iron-protein	gnl\|CDD\|365905	pfam00148, Oxidored_nitro, Nitrogenase component 1 type Oxidoreductase.	3.71443e-25
CP027570.1\|AVO74127.1\|803068_803851_-\|crotonase	gnl\|CDD\|180270	PRK05809, PRK05809, short-chain-enoyl-CoA hydratase.	1.60312e-132
CP027570.1\|AVO74129.1\|805936_807520_-\|3-oxoacid-CoA-transferase	gnl\|CDD\|227016	COG4670, COG4670, Acyl CoA:acetate/3-ketoacid CoA transferase [Lipid metabolism].	0
CP027570.1\|AVO74134.1\|811873_813919_-\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|372305	pfam12773, DZR, Double zinc ribbon. This family consists of a pair of zinc ribbon domains.	4.23289e-19
CP027570.1\|AVO74132.1\|809598_810513_-\|polyphosphate-kinase-2-family-protein	gnl\|CDD\|274737	TIGR03709, PPK2_rel_1, polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which. [Central intermediary metabolism, Phosphorus compounds].	1.76218e-141
CP027570.1\|AVO74122.1\|792420_793677_-\|glutamate:protein-symporter	gnl\|CDD\|234968	PRK01663, PRK01663, C4-dicarboxylate transporter DctA; Reviewed.	8.88775e-140
CP027570.1\|AVO74116.1\|786000_786210_-\|HypC/HybG/HupF-family-hydrogenase-formation-chaperone	gnl\|CDD\|376549	pfam01455, HupF_HypC, HupF/HypC family.	1.92893e-23
CP027570.1\|AVO74131.1\|808983_809496_-\|ferritin	gnl\|CDD\|153113	cd01055, Nonheme_Ferritin, nonheme-containing ferritins. Nonheme Ferritin domain, found in archaea and bacteria, is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The ferritin protein shell is composed of 24 protein subunits arranged in 432 symmetry. Each protein subunit, a four-helix bundle with a fifth short terminal helix, contains a dinuclear ferroxidase center (H type). Unique to this group of proteins is a third metal site in the ferroxidase center. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite.	4.51257e-69
CP027570.1\|AVO74121.1\|791828_792080_-\|iron-only-hydrogenase-system-regulator	gnl\|CDD\|274882	TIGR03959, putative_iron-only_hydrogenase_system_regulator, putative iron-only hydrogenase system regulator. Members of this protein family occur as part of a system for producing iron-only hydrogenases, dependent on radical SAM proteins HydE and HydG and GTPase HydF. One member of this family, TM_1266 from Thermotoga maritima, has a known crystal structure. The small size, about 80 residues, and a distant relationship to the nickel regulator NikR of the CopG transcriptional regulator family suggest a role as a transcription factor. [Regulatory functions, DNA interactions].	8.62334e-39
CP027570.1\|AVO74130.1\|807648_808650_-\|cobalt-chelatase	gnl\|CDD\|368778	pfam06180, CbiK, Cobalt chelatase (CbiK). This family consists of several bacterial cobalt chelatase (CbiK) proteins (EC:4.99.1.-).	1.03044e-91
CP027570.1\|AVO74115.1\|784942_786001_-\|hydrogenase-formation-protein-HypD	gnl\|CDD\|376666	pfam01924, HypD, Hydrogenase formation hypA family. HypD is involved in hydrogenase formation. It contains many possible metal binding residues, which may bind to nickel. Transposon Tn5 insertions into hypD resulted in R. leguminosarum mutants that lacked any hydrogenase activity in symbiosis with peas.	0
CP027570.1\|AVO74133.1\|810540_811884_-\|hypothetical-protein	gnl\|CDD\|379224	pfam13502, AsmA_2, AsmA-like C-terminal region. This family is similar to the C-terminal of the AsmA protein of E. coli.	0.00896058
CP027570.1\|AVO74119.1\|789756_791067_-\|oxidoreductase	gnl\|CDD\|365905	pfam00148, Oxidored_nitro, Nitrogenase component 1 type Oxidoreductase.	1.4426e-26
CP027570.1\|AVO74125.1\|801142_801493_-\|desulfoferrodoxin	gnl\|CDD\|239421	cd03171, SORL_Dfx_classI, Superoxide reductase-like (SORL) domain, class I; SORL-domains are present in a family of mononuclear non-heme iron proteins that includes superoxide reductase and desulfoferrodoxin. Superoxide reductase-like proteins scavenge superoxide anion radicals as a defense mechanism against reactive oxygen species and are found in anaerobic bacteria and archeae, and microaerophilic Treponema pallidum. Desulfoferrodoxin (class I) is a homodimeric protein, with each protomer comprised of two domains, the N-terminal desulforedoxin (DSRD) domain and C-terminal SORL domain. Each domain has a distinct iron center: the DSRD iron center I, Fe(S-Cys)4; and the SORL iron center II, Fe[His4Cys(Glu)].	3.13623e-31
CP027570.1\|AVO74126.1\|801796_802945_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	0
CP027570.1\|AVO74123.1\|793851_794058_+\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|224559	COG1645, COG1645, Uncharacterized Zn-finger containing protein [General function prediction only].	0.000205554
CP027570.1\|AVO74117.1\|786441_788724_-\|carbamoyltransferase-HypF	gnl\|CDD\|223146	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones].	0

>CP027570.1|AVO74124.1|794060_794309_-|hypothetical-protein
MLSRTLLGMRWGDLSEDTRQMLLNRADIDGFNGADGDRYSRGTLHFRDTLMGIQASVETDRFSGDMGNNGIFIDDDAVISRI
>CP027570.1|AVO74123.1|793851_794058_+|zinc-ribbon-domain-containing-protein
MICPKCGTELRDGVLMCPICGTKQEVPPPVPPKNIQNNPKIFTKTRVISVIIVAAFIIIGLCKVFVFK
>CP027570.1|AVO74122.1|792420_793677_-|glutamate:protein-symporter
MKRKIGLSSQILIGLVLGALVGYLFPDFGDKLKPFGDAFLRMIKMIVVPLIFSTLVMGIAGTGDFKKLGRLGGKAIIWFEFATTIALAIGLLFMNIAEPGVGVTLSASAANASNAAAASQHSVDLVDYAVHIIPTNIVDAMARQDMLQIIFFACFFGVAVAHIGGKGETIVDICQSVAEAMFKVTGYVMHFAPIGVFAMIAYTVGSYGIAMLIPLGKLILSVACATALFICVVALIASVFTGINFFHVIRALKDILFLAFSTASSEAALPGAMKRLEELGVPKTIVTFVMPTGYSFNLDGSTLYSSAGILFIAQLYGIQMPIEQQLLVMVTLMLSTKGIAGVPGAGIIVVAATAAAFNLPTEGVAILLGIDRLLDMIRTICNVCGNCMATVVVACWEKELNKATFNEKYRAFLGGKNS
>CP027570.1|AVO74121.1|791828_792080_-|iron-only-hydrogenase-system-regulator
METRVALIGIIVGNRQESAKLNEILHEYGQYVVGRMGVPYKDKDINVISLIVDAPQDVISALSGKLGMLPDVSTKTIYPPMPQ
>CP027570.1|AVO74120.1|791063_791819_-|nitrogen-fixation-protein-NifH
MLKIAIYGKGGIGKSTMTSNLAASFAYLGKKVIQIGCDPKADSTFNLLGGHPVQPVMNYLREHDEDPESIEDISRIGYGGVLCIETGGPTPGLGCAGRGIIATFSLLEDLGLFEKYEPDVVLYDVLGDVVCGGFAAPIREGYAEQVLIVTSGEKMALYAANNINTAVANFADRSYAKVRGIILNRRNVPDEEAKVRAFADRAHLSIVGDIPRSDDINRYEDLGQTVIEGDPDLPISRTFLDLAQKLLQDKE
>CP027570.1|AVO74119.1|789756_791067_-|oxidoreductase
MIMTERKPYAITVQDLVERGRDDIPAELITSTHLIYNSPAALAFNSPGAQGFGVKRAGLSIPGSVMLLVGPGCCGRNTTILSELGGYSDRFFFYIMDETDIVTGRHLKKIPQAVCEVVDSLAEKPSVVMICMTCVDALLGTDMERVCRKAEKEAGLPVVPCYMYALTREGRKPPMVDVRRAIYSLLEKQPRRRRTVNLLGYFAPLQDDCEIYDILRGVGFTQINEISRCPDFAAYKAMSQANVNFILNPESRLAAQDMEKRLGIPSVELTRLYQVAQIHKQYQALAQVLGTEIDDSSWHERAQAVVGKMREKYSGTTVAIGEMQNGNAFEMALALTRYGFVIKEIYANLGPDDFVYLRHLAALSPDTEVYSNLSPSMLYYQGQDHPVDVTIGKDAAYYHEQAAHLHWDEDIQPFGYAGVISLLQGLDRVLSERKHP
>CP027570.1|AVO74118.1|788725_789760_-|nitrogenase-molybdenum-iron-protein
MKGLWKYISPFAPDDSGAAAVLYGLNGIVVICDAGGCAGNICGFDEPRWFSGKKSAVFSAGLRDMDAILGRDDRLVDKLCDAAKTIDASFAAIVGTPVPSVIGTDYKALKRMAEKRLSLPVVTVDTTGMDYYDKGIEKAYEALFPALIDPSQQAEADTVGVLGAVPLELMHPGDIEWISQSLVEDGWQQILLFDEIDDYRKAGKASLNLVVSPAGLKAAQYLKETFGTPYELHYFGLDAVVDFDDNLFAGKNVLIIHQQVAASAMAAMAEEAGAAYVTTASWFMELPGPQSTDYVQLREEDDLRQLADNDHFDVILGDAYFRRALPNFHGQYIDFPHFAVSGRG
>CP027570.1|AVO74117.1|786441_788724_-|carbamoyltransferase-HypF
MYTERICVFGIVQGVGFRPFVSRIATAHSICGTVCNKGSYVEILAQGSQSDLAAFREDLEARAPERSAILKVLRESEDRPPYEAFSIVESAREEGDIFVSPDIAICDACKKELFDKTNRRYLHPFINCTACGPRLTILDAMPYDRERTSMGEFPMCPQCEYEYTHAETRRYDAQPVCCNDCGPEVYLLDRPERRRQAIVAARQAIVDGKIIAIKGIGGFHLCCDARNEQAVRTLRQRKRRPVKPFAVMMKDLEAVRRQCVIPDGAEKVLDGHQKPIVLLPKKSGQTLAPSIAPGNPSVGVMLPYTPLHLLLFTYDDDLSVPDALVMTSANESGAPICHNDEEARQELSGLCDLVLSHNRRIRLRADDSVMDWYDGRPYMIRRSRGYAPLPFFYGRGSGKDVLAMGGELKNCFCIGRNNLFYPSPYIGDMADIRTVEALRQSIRRMTTLLEAKPAVVACDLHPRYNTTAVAHELGLPVVAVQHHYAHILSCMAENGCEQPVIGVAFDGTGYGTDGTIWGGEILVSQVQGFRRAGSIQPFWQRGGDASAREGWRIAVSLIDGLQEDREKASAIIDELQLCSAVEKQAQFFLADQQINSVLSTSAGRLFDGVSAILGICRASTFEGQASMALQFAAETWEKEHPQPAVQPMAPLHGKERLLLPTGALVQRLLEERLAGGNTDQLAYVFHRDLAAMIAGACLSVREETGLTTAALSGGVFQNRLLLRLCDQTLQQLGFTVLKHSTVPPNDGGIALGQAVYAAYM
>CP027570.1|AVO74116.1|786000_786210_-|HypC/HybG/HupF-family-hydrogenase-formation-chaperone
MCVGLPARVMKIQNGMALVDASGAKREVSAALIDELDPGDYVMVHAGMAIAKITNNDADETDDILEELD
>CP027570.1|AVO74115.1|784942_786001_-|hydrogenase-formation-protein-HypD
MAEAKKRTALDIIRSYDGPKIRIMEVCGTHTHEIFRQGIRQILPPQVDVISGPGCPVCVTPVGYIDQAIWLALEKGVTICTFGDLVRVPGSTMSLADARSEGAHVEIVYSPLDAYDYAKAHPDEDVVFLSVGFETTTPPSCLAVKQAVADGMTNFSLLTANKTMPMAYEAMKDSADAFLYPGHVDAVMGTGDGEAMLKEGVSGVVAGFTAKELLTAFAVILAKFPQGKPFFKNCYPRVVKAEGSPAAQALMKEVMEPCDSEWRGLGVIPQSGQQLRPAFAVCDARKKYGVPDMDGRANPACRCGDILKGQCKPPQCPLFGKVCTPEHPVGACMVSHEGACSAYYLYGGNLHE
>CP027570.1|AVO74125.1|801142_801493_-|desulfoferrodoxin
MKDVKFYQLEGKNVLALLSGSVEGAEPIAVGSVDAAKEKHIPVVKRVGDTLEVTVGSVTHPMLEEHHIEWIALATDDKLEIKFLKPGEEPKAVFAAVDSGVVYESCNLHGIWKAEF
>CP027570.1|AVO74126.1|801796_802945_-|acyl-CoA-dehydrogenase
MDFKLSEMQQDIAKLAKDFAEKELAPTVKERDEKEVFDRAILDKMGTLGLLGIPWEEENGGVGADFLSLAVACEEVAKVDPSIALSFEVHTMLCSWPIWKFGTAEQKAKYLKPLAEGTKLGAFGLTEPNAGTDALNGSTVATKNEDGSYTLNGSKVFNTNGGEADVTVVFASTDKSKGAKGMSAFILEKGMEGFTYGKEEVKMGIRASVQRELVFQNVKVPAENLLGKEGEGFKIAMMTLDGGRVGVGAQALGIAEGAYNAAVQYAKERTQFGKPIAKFQAISFMLADMKLKIETARLAVYQAAWKMAQPDVKSYSVDAAIAKKYASDVAMQVTTDAVQVFGGYGFTREYPVERYMRDAKITQIYEGTNQVQQMVISGAILR
>CP027570.1|AVO74127.1|803068_803851_-|crotonase
MAYNNIKFVNEDGIGILTISRPKALNALNTETVTELNDCVGKIEADESVKVVIITGEGAKSFVAGADIVEMSTKNPVEGRKFGKISQDTFTRIENLPQPVIAAVNGYALGGGCELACACDFRYAAENAKFGQPEVGLGITPGFGGTQRLPRVVGRGYGKEMIFRANMIDAQEAHRIGLVNKVVPQEELMDTCKKVAKEIMGNAPIAVQLAKTAINRGINCDVVTGIAYEDEVFALCFSTEDQKEGMDAFVNKRAKHFQGK
>CP027570.1|AVO74128.1|804168_805629_+|hypothetical-protein
MISDGYASTLKRLITFTQAKFISLADVVGYDVSYVNKWSNGTKLPSSRYVERINEEMGQYFAELIAKQKKEAKFFKAFPISENTEDLGFEIGQYLCAAYRTTLNQSRSPKGKENRPSIQVITGHHDTSAFLSDLLQKSIQSLESDGELLVLGEFCTLYKTGFWKYFDGLKLQHKLTIRVGLDLDKIEENFDDLLTVYRILDSFLDIDFVFYDIQDTSNANLIILKDSFVVQYALDTQPRFKMCTYIFDESLIGDIYEKFSFNGAEKKPLMSTVSSLGMDELGYRTAFYATTKFFFYLTIGFEFLLPHEVFDHISERVSPEQAFSIQRLCVTWEEILNASEITFIMPTTSLLRYVESGYIYLTDIEYSLTAEERKDHIKSIFEGLEKNPHLTTGVLLPTVSDDMYTGKDLSFYSNYKTGFLKKNKRNIHNDADSFYVISSNRLHSILLNAFQSMKNQPSYRQYDLEALKKKYETYKPLIERTLSLSK
>CP027570.1|AVO74129.1|805936_807520_-|3-oxoacid-CoA-transferase
MKQVKIITAQEAAQLVKDGDVVTTNGFVGSGQPEALTSALEERFLNTGSPKDLTLIYAASQGNTDGRGGDHFAHEGMLKKAILGHWNAVTSLQKLVNENKIQAYNLPQGTLSQYFRDVAAHRLGTITHVGLDTFADPRISGGRLNDVTKEDFVKVINIEGHDQLFYPRMDMNIGFIRGTYADEWGNVVMSKEVSPFDATPLAQAVHNSGGIVVVQVEKIVKGGTLDPKLVKVPGIYVDYIVQVDDETKRQQSFDCEYDPSLTGETTIPVKALDPAPLNAKKVIARRAALLLLNMSNEAVINLGIGIPELVSSVANEEGIGDSLTMTVEAGAIGGVPLGGVRFGASVNAEAYMDQATQFDFYDGGGLDLTCLGLAECDKDGNINVSKFGTRIAGCGGFVNITQNTKNVVFCGTFTTGKLREEIKDGELHITQEGKVKKFVPEVGHITFSGNYARKHKQHVLYITERAVFEMKEDGVHLTEIAPGVDLQKDVLDQMGFKPIIDDVKLMPAFLFEDKPMGLKKMKEEMNK
>CP027570.1|AVO74130.1|807648_808650_-|cobalt-chelatase
MFHKKMKTALLLSLALTSFGAFSAPSFAAGYTLNPEVKDATPALKQAAEIGVRTYNNPAMQNEANKDAILVLSFGTTYKDSRQKTIDRTVDAIKAAHPDQKVVVAFTSHIIVDRIKAKEGLTVPTPEQAMAQLKKEGYTRVAITSLDVIPGMEYAYDSAIFDLYKKDFKKMTLGTPLMYWMGQEDQRDDIAEFVKAFSTQFPKIGKKDAILVMAHGTPHPANAYYSVVQNRLDAADLGNVFIYSVEGWPHLDTVIPQLKAKGIENVILMPMMMVAGDHANNDMAGADDDSHKSILEKEGFKVTTYIHGLGENEAVRQMFVERADEAWQALEAQ
>CP027570.1|AVO74131.1|808983_809496_-|ferritin
MLDAKVKELINKQINQEFYSEYLYLAFANYFYDNGLDGFANWYDVQAQEERDHAMLMRTYLHNNGERVTFSAIAEPQNDFDSIKAVLKAGLAHEQYVTSLINKIYQAADKVHDYRTMQCFDWFVKEQGEEEKNADDLIKKYKMFGSDAKGLYSLNQELLARTYVAPTLVL
>CP027570.1|AVO74132.1|809598_810513_-|polyphosphate-kinase-2-family-protein
MDISRYLAKSGEKVDLAQWPTACDVDIDKKKVKEELLDQTITEMQDLQEKLFADNHYGLVIVLQAMDAAGKDGTVKHVFARLNPAGVKVQSFKKPSSEELDHDYMWRINKALPGRGEIGIFNRSHYEEVVVARIHNLIKSDGMPEELVRKDIWESRYRQIRDWERYLSENGFPMVKIFLHLSKNEQKKRLIDRIVTKQKNWKFDMSDIEERKYWNRYQKVYGEVLTATSTKYAPWYIVPADDKWYTRYVVAQIVLKALKAIDPKFPKLSPEVEKQLTQFRQLLKEVDIKDLKTIKNVIDEQKVK
>CP027570.1|AVO74133.1|810540_811884_-|hypothetical-protein
MWNNWYSRHKGKFKKIAVLVLCIAAALYGLCFYMSYKAADIFNQVVAERQLFPGTVTVERLTATPGGTVSFENLVWNDEDGDTLVQIPKGQFTVKLSDVLTGHIGTQTVEDVTLDNAYIHLIFNDKMELQHVKKISGHQSGDPRGFIKVTGPKGNHPFNCHVALHQSVIEAEAPGRHFTIGDVEFSSHIHTKGKTTLDLRAGHFSGTLEAKSLRIRGSLDFKPDTPQYNLSLLLNDCNPRSLGAGLDIDDAATVSADIRGPLYAPVIDGTLKMDRLDITALVFTDVVGQVHYEQGLLDVTEVTAGVFGGSMKGQGQVNLDDRSYTADMTGSRLKGGIAAHDLFLRCDVDLNLHMEENKSAGTKAIYGDFRSGPGRYHNVPFRGISGSFAQDGKTLNFRDVVISMFFGDVSTDAFSIVNGKVKIGAINIDYKNGKRSRWGKGGPQTIR
>CP027570.1|AVO74134.1|811873_813919_-|zinc-ribbon-domain-containing-protein
MDSLGYFGKWFPTEHKKYTAIIAMMYLGVVTTVLGVLFELALRGLEMIGLFGGPVGIRRTIDVLTFFSGLNTLASLALFVIMIYLLYKTRALVYLLKMALGYFVVDLLLILIADLFSGTVAAILCILGIIATIYVNRRRWHYISKYRRYIYYVVLSWLISALCTAAVVGHIVYSMTQLMFGMTRGGYGTFIGYAVLLVLVWMIPVFCQHYIYRREERLGTSFYQAFRLMNTVPWTAVFFIFGISSLASIGTISGENMFTSFDFDDTGDNQANLEDRKNGMSTRKVNEVNKKTCPYCGHPVEGDAIFCSHCGKPVYTCPQCHHVVDPTAKFCPSCGTRLQTPDASAGPLPDPFSKETEPAAAPLSEVPRHDIQQNMPPQRPLKEQLREHGKVLIALGVVLVLAVAGGIWYAHSQPKSLPAGTGTHSQQVVKTADSELSLNGVYLGQSWDEANDGLGRELSTSDSKDGAVHHKFTDMDVVVKDNKVIMLTSSSPAAQSKRGIHQGSSFDDVVNAYGDDYQASEYGAQIHYEYTFKTDDGKTGILRFAVSKNSQAVEYISVRLADEQTDGAKQAFLAYHKDISGHHLQEAFQLLTPDFQTSVGGYDGYAPGYANTLSSDVSNIRQIASGGNKTTFSFALKARDRIPGSAKVKVQYFNGQVTMVKDGGTWKISDMSAKKSGEHVE

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Crispr_ID: CP027570_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027570_5

1141566-1141657

Orphan

Consensus_repeat	Method
CGTGGGGCGTCCGCCAAATTTCCAAAATGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027570_5

>merge|CP027570|5|1141566-1141657|CRISPRCasFinder
CGTGGGGCGTCCGCCAAATTTCCAAAATGTCCCGAAACGTTCCCGAAACGTAGGGGCGCCCGCGTGGGGCGCCCGCCAAATTTCCAAAATGT

>CP027570|5|5|1141566-1141657|CRISPRCasFinder
CGTGGGGCGTCCGCCAAATTTCCAAAATGT	CCCGAAACGTTCCCGAAACGTAGGGGCGCCCG
CGTGGGGCGCCCGCCAAATTTCCAAAATGT

Protein	Signature genes	Signature genes Name	Protein_function
CP027570.1\|AVO74405.1\|1146818_1147613_+\|carbon-nitrogen-family-hydrolase	unknown	unknown	gnl\|CDD\|143607
CP027570.1\|AVO74396.1\|1135933_1136827_-\|2-dehydropantoate-2-reductase	unknown	unknown	gnl\|CDD\|235821
CP027570.1\|AVO74394.1\|1133324_1134443_+\|2-hydroxyacyl-CoA-dehydratase	unknown	unknown	gnl\|CDD\|377594
CP027570.1\|AVO74408.1\|1149852_1151202_-\|NADP-specific-glutamate-dehydrogenase	unknown	unknown	gnl\|CDD\|181834
CP027570.1\|AVO74407.1\|1148580_1149759_+\|M20-family-peptidase	unknown	unknown	gnl\|CDD\|349921
CP027570.1\|AVO74401.1\|1142560_1143208_+\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380358
CP027570.1\|AVO74397.1\|1137006_1138968_+\|heavy-metal-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319847
CP027570.1\|AVO74409.1\|1151655_1153569_+\|fructose-bisphosphatase-class-III	unknown	unknown	gnl\|CDD\|377726
CP027570.1\|AVO74399.1\|1141109_1141550_+\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|107228
CP027570.1\|AVO74395.1\|1134648_1135797_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173847
CP027570.1\|AVO74403.1\|1144685_1145915_+\|iron-hydrogenase	unknown	unknown	gnl\|CDD\|274983
CP027570.1\|AVO74400.1\|1141688_1142117_+\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|107228
CP027570.1\|AVO74402.1\|1143243_1144575_+\|MBL-fold-hydrolase	unknown	unknown	gnl\|CDD\|237023
CP027570.1\|AVO74390.1\|1128720_1130274_+\|3-oxoacid-CoA-transferase	unknown	unknown	gnl\|CDD\|227016
CP027570.1\|AVO74406.1\|1147614_1148562_+\|transporter	unknown	unknown	gnl\|CDD\|273356
CP027570.1\|AVO74404.1\|1146046_1146709_-\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|381680
CP027570.1\|AVO74392.1\|1131240_1132017_+\|2-hydroxyglutaryl-CoA-dehydratase	unknown	unknown	gnl\|CDD\|224835
CP027570.1\|AVO74398.1\|1139460_1140783_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
CP027570.1\|AVO74393.1\|1132038_1133325_+\|2-hydroxyacyl-CoA-dehydratase	unknown	unknown	gnl\|CDD\|377594
CP027570.1\|AVO74391.1\|1130300_1131215_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|372667

Protein	Function_ID	Function_description	E-value
CP027570.1\|AVO74405.1\|1146818_1147613_+\|carbon-nitrogen-family-hydrolase	gnl\|CDD\|143607	cd07583, nitrilase_5, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.	4.08115e-130
CP027570.1\|AVO74396.1\|1135933_1136827_-\|2-dehydropantoate-2-reductase	gnl\|CDD\|235821	PRK06522, PRK06522, 2-dehydropantoate 2-reductase; Reviewed.	2.06196e-64
CP027570.1\|AVO74394.1\|1133324_1134443_+\|2-hydroxyacyl-CoA-dehydratase	gnl\|CDD\|377594	pfam06050, HGD-D, 2-hydroxyglutaryl-CoA dehydratase, D-component. Degradation of glutamate via the hydroxyglutarate pathway involves the syn-elimination of water from 2-hydroxyglutaryl-CoA. This anaerobic process is catalyzed by 2-hydroxyglutaryl-CoA dehydratase, an enzyme with two components (A and D) that reversibly associate during reaction cycles. This component contains one non-reducible [4Fe-4S]2+ cluster and a reduced riboflavin 5'-monophosphate.	7.16298e-100
CP027570.1\|AVO74408.1\|1149852_1151202_-\|NADP-specific-glutamate-dehydrogenase	gnl\|CDD\|181834	PRK09414, PRK09414, NADP-specific glutamate dehydrogenase.	0
CP027570.1\|AVO74407.1\|1148580_1149759_+\|M20-family-peptidase	gnl\|CDD\|349921	cd05672, M20_ACY1L2-like, M20 Peptidase aminoacylase 1-like protein 2-like, amidohydrolase subfamily. Peptidase M20 family, aminoacylase 1-like protein 2 (ACY1L2; amidohydrolase)-like subfamily. This group contains many uncharacterized proteins predicted as amidohydrolases, including gene products of abgA and abgB that catalyze the cleavage of p-aminobenzoyl-glutamate, a folate catabolite in Escherichia coli, to p-aminobenzoate and glutamate. p-Aminobenzoyl-glutamate utilization is catalyzed by the abg region gene product, AbgT. This subfamily includes Staphylococcus aureus antibiotic resistance factor HmrA that has been shown to participate in methicillin resistance mechanisms in vivo in the presence of beta-lactams. Aminoacylase 1 (ACY1) proteins are a class of zinc binding homodimeric enzymes involved in hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. ACY1 breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	1.67707e-109
CP027570.1\|AVO74401.1\|1142560_1143208_+\|cupin-domain-containing-protein	gnl\|CDD\|380358	cd02230, cupin_HP0902-like, Helicobacter pylori HP0902 and related proteins, cupin domain. This family includes prokaryotic and archaeal proteins homologous to HP0902, a functionally uncharacterized protein from Helicobacter pylori and Spy1581, a protein of unknown function from Streptococcus pyogenes. These proteins demonstrate all-beta cupin folds that cannot bind metal ions due to the absence of a metal-binding histidine that is conserved in many metallo-cupins. HP0902 is able to bind bacterial endotoxin lipopolysaccharides (LPS) through its surface-exposed loops, where metal-binding sites are usually found in other metallo-cupins, and thus may have a putative role in H. pylori pathogenicity.	1.09076e-20
CP027570.1\|AVO74397.1\|1137006_1138968_+\|heavy-metal-translocating-P-type-ATPase	gnl\|CDD\|319847	cd07548, P-type_ATPase-Cd_Zn_Co_like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis CadA which appears to transport cadmium, zinc and cobalt but not copper out of the cell. Bacillus subtilis CadA/YvgW appears to transport cadmium, zinc and cobalt but not copper, out of the cell. Functions in metal ion resistance and cellular metal ion homeostasis. CadA/YvgW is also important for sporulation in B. subtilis, the significant specific expression of the cadA/yvgW gene during the late stage of sporulation, is controlled by forespore-specific sigma factor, sigma G, and mother cell-specific sigma factor, sigma E. This subfamily also includes Helicobacter pylori CadA an essential resistance pump with ion specificity towards Cd(2+), Zn(2+) and Co(2+), and Zn-transporting ATPase, ZiaA(N) in Synechocystis PCC 6803. Transcription of ziaA is induced by Zn under the control of the Zn responsive repressor ZiaR. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
CP027570.1\|AVO74409.1\|1151655_1153569_+\|fructose-bisphosphatase-class-III	gnl\|CDD\|377726	pfam06874, FBPase_2, Firmicute fructose-1,6-bisphosphatase. This family consists of several bacterial fructose-1,6-bisphosphatase proteins (EC:3.1.3.11) which seem to be specific to phylum Firmicutes. Fructose-1,6-bisphosphatase (FBPase) is a well known enzyme involved in gluconeogenesis. This family does not seem to be structurally related to pfam00316.	0
CP027570.1\|AVO74399.1\|1141109_1141550_+\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|107228	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18.5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic membrane.	5.54518e-39
CP027570.1\|AVO74395.1\|1134648_1135797_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	0
CP027570.1\|AVO74403.1\|1144685_1145915_+\|iron-hydrogenase	gnl\|CDD\|274983	TIGR04105, hypothetical_protein, [FeFe] hydrogenase, group B1/B3. See for descriptions of different groups.	1.51877e-109
CP027570.1\|AVO74400.1\|1141688_1142117_+\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|107228	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18.5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic membrane.	1.23995e-40
CP027570.1\|AVO74402.1\|1143243_1144575_+\|MBL-fold-hydrolase	gnl\|CDD\|237023	PRK11921, PRK11921, anaerobic nitric oxide reductase flavorubredoxin.	0
CP027570.1\|AVO74390.1\|1128720_1130274_+\|3-oxoacid-CoA-transferase	gnl\|CDD\|227016	COG4670, COG4670, Acyl CoA:acetate/3-ketoacid CoA transferase [Lipid metabolism].	0
CP027570.1\|AVO74406.1\|1147614_1148562_+\|transporter	gnl\|CDD\|273356	TIGR00946, Uncharacterized_transporter_MTH_1382, he Auxin Efflux Carrier (AEC) Family. [Transport and binding proteins, Other].	9.00179e-32
CP027570.1\|AVO74404.1\|1146046_1146709_-\|uracil-DNA-glycosylase	gnl\|CDD\|381680	cd10030, UDG-F4_TTUDGA_SPO1dp_like, Uracil DNA glycosylase family 4, includes Thermotoga maritima TTUDGA, Bacillus phage SPO1 DNA polymerase, and similar proteins. Uracil DNA glycosylase family 4 includes Thermotoga maritima TTUDGA, a robust uracil DNA glycosylase that shares narrow substrate specificity and high catalytic efficiency with family 1, acting on double-stranded and single-stranded uracil-containing DNA. Members of this family possess four conserved cysteine residues required to coordinate the [4Fe-4S] iron-sulfur cluster. This family also includes the N-terminal domain of Bacillus phage SPO1 DNA polymerase. Bacteriophage SPO1 is one of a group of large, lytic, tailed bacteriophages of Bacillus subtilis, and contains hydroxymethyluracil (hmUra) in place of thymine in their DNA. It has been speculated that this UDG domain may help discriminate between hmUra containing SPO1 DNA and thymine-containing host DNA. Uracil-DNA glycosylases (UDGs) initiate repair of uracils in DNA. Uracil in DNA can arise as a result of mis-incorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations. Thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other.	7.78047e-73
CP027570.1\|AVO74392.1\|1131240_1132017_+\|2-hydroxyglutaryl-CoA-dehydratase	gnl\|CDD\|224835	COG1924, COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism].	1.08364e-85
CP027570.1\|AVO74398.1\|1139460_1140783_+\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.34478e-77
CP027570.1\|AVO74393.1\|1132038_1133325_+\|2-hydroxyacyl-CoA-dehydratase	gnl\|CDD\|377594	pfam06050, HGD-D, 2-hydroxyglutaryl-CoA dehydratase, D-component. Degradation of glutamate via the hydroxyglutarate pathway involves the syn-elimination of water from 2-hydroxyglutaryl-CoA. This anaerobic process is catalyzed by 2-hydroxyglutaryl-CoA dehydratase, an enzyme with two components (A and D) that reversibly associate during reaction cycles. This component contains one non-reducible [4Fe-4S]2+ cluster and a reduced riboflavin 5'-monophosphate.	5.51107e-73
CP027570.1\|AVO74391.1\|1130300_1131215_+\|VOC-family-protein	gnl\|CDD\|372667	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.	1.6347e-14

>CP027570.1|AVO74399.1|1141109_1141550_+|Hsp20/alpha-crystallin-family-protein
MMKGLFPVVTNSDFVFPDTIFDNFFNGFENPTEANYRVPQVDIEDTDKAYILTTDLPGVAKEDINVSYKDDVLTLTAKHEEKKDEKDDKKKYIRKERSSHTFCRQFTVRNIQKDGIQAAFKDGVLTITLPKEDPKKVAEAHRIEVK
>CP027570.1|AVO74398.1|1139460_1140783_+|MFS-transporter
MEKAMGKIMTAAAETRAAAGTMTNFRWKIAFLIFLISFVAYMDRVNLSVATPVIMQEFGFTKIDMGFIQTCFFASYALMQVPGGILAEKFGMRKTGALAILWWSVFTALTALAKGKISFAAVRLAFGLGEGPVFPSLGAATFTWFNKHEKGKASSSILLGTFFGPVVGPVATVALMGLFGWHAVFIIFGLVGIALAWVWHRFACDNPADSPYVNAEEAAYINEGRSADSLKKAVAPWSKFLRSTQFWAVGIQFMVVDYIMYVFLAWLPMYLTEVHNMSLKSMGFWASCPWIALMAMVFLAGFVSDKIANGSHSEMQYKMRTVTAMAGVAVTSLGLYIASHTADPAMNIFWMSVSLGALGFAMSASWSSVISLGGKYTGSVSGWINLWGNIGGVLAPIVTAFFVTNYGWNNAFTATSLFGIIAIVAWIFVKPGKQLVPQDK
>CP027570.1|AVO74397.1|1137006_1138968_+|heavy-metal-translocating-P-type-ATPase
MAEEFLKDHGCSCCNGHHDEDEGIKLNEVGTCSCGYGDDEDDEEESPLWTLIAGTVLFLITYLTNIIPEAVSLPAYIIAYLLLGYGVLREAGENIMKRRPFDENFLMAVATIGAFAIGDYPEAVAVMLFSRIGEAMEDRAVHRSRKQVAAAIDMRPEVVHRLGADGSTVTIPAKEAIAGDVVVVRVGDRIPLDGIVTAGESLIDTSALTGEPVPVICREGAEVLSGSINTTGVLQVKVTKPLDESMVTKILESVERAAARKPKIDRFITRFSRIYTPAVVAIAAATAIVPSLVTGQWHYWIYTALTFLVISCPCALVLSVPLSFFAGIGAASKQGILFKGGIAMEQMKHIKAVVFDKTGTITKGNFVVHQVLPADNRSADDVLCLCASAEQASNHPIARSVVAQACEQGLRLTEPSAMEEIAGQGLKARVGSHDVLCGNRQLLDGQHITLPAMDKVEYGSELYVAVDGAYAGRVVISDTIKDDAVDAIQAISRMGITTAMLTGDSQQAADYIASKTGIDDVRAKLLPQDKVNQMDVLRQQYGPVLFVGDGINDAPVLAGADVGAAMGSGADAAVEAADVVFMQSRVSAVPAALHLSRETMKIAMENVVFALGIKAVVMIAGFAGYASMWAAVFADSGVAALCVLNSVRMLYKK
>CP027570.1|AVO74396.1|1135933_1136827_-|2-dehydropantoate-2-reductase
MKIMVTGIGGVGGYIASVLCANYDDVTLVARKKRKESLQTKGLVVHSDFFGHHVAHPAVTDDPSSAGIQDVIFVCVKNYSLEAALTAVLPCIGDDTIVVPVLNGFTYHDTATSIMKNGKIVDSAIYITSSYQEDYSIRQEGRFARIYIGSDDAEATKKVYDVLNHPGLTCCIAENITVEIWRKFILNCAYNVLTAYYRTSIGGALSQPQGKEEFRALLQEAYDVGKAAGVPLPDDVVDDQYRRILGSDDMDATSSLKRDIAAGHQSELDTFSGALIRLAHQYGVPVPISEKCYQALV
>CP027570.1|AVO74395.1|1134648_1135797_+|acyl-CoA-dehydrogenase
MEFKLSELQQDIANLAKDFAEKKLAPTVKERDEKEVFDRAILDEMGTLGLLGIPWEEENGGVGADFLSLAVACEEVAKVDPSIALSFEVHTMLCSWPIWKFGTAEQKAKFLKPLAEGTKLGAFGLTEPNAGTDALNGSTVATKNEDGSYTLNGSKVFNTNGGEADVTVVFASTDKSKGAKGMSAFILEKGMEGFTYGKEEVKMGIRASVQRELVFQNVKVPAENLLGKEGEGFKIAMMTLDGGRVGVGAQALGIAEGAYNAAVQYAKERTQFGKPIAKFQAISFMLADMKLKIETARLAVYKAAWKMAQPDVKSYSVDAAIAKKYASDVAMQVTTDAVQVFGGYGFTREYPVERYMRDAKITQIYEGTNQVQQMVISGAILR
>CP027570.1|AVO74394.1|1133324_1134443_+|2-hydroxyacyl-CoA-dehydratase
MSQIDELISKLQEVSNHPQKTVLNYKKQGKGLVGMMPYYAPEEIVYAAGYLPVGMFGSQNPQISAARTYLPPFACSLMQADMELQLNGTYDCLDAVIFSVPCDTLRCMSQKWHGKAPVIVFTQPQNRKIRPAVDFLKAEYEHVRTELERILNVKISDLAIQEAIKVYNENRQVMREFCDVAAQYPQIFTPVKRHDVIKARWFMDKAEHTALVRELIDAVKKEPVQPWNGKKVILSGIMAEPDEFLDIFSEFNIAVVADDLAQESRQFRTDVPSGIDPLEQLAQQWQDFDGCPLALNEDKPRGQMLIDMTKKYNADAVVICMMRFCDPEEFDYPIYKPEFEAAGVRYTVLDLDIESPSLEQLRTRIQAFSEIL
>CP027570.1|AVO74393.1|1132038_1133325_+|2-hydroxyacyl-CoA-dehydratase
MSEEKTVDIESMSSKEALGYFLPKVDEDARKAKKEGRLVCWSASVAPPEFCTAMDIAIVYPETHAAGIGARHGAPAMLEVAENKGYNQDICSYCRVNMGYMELLKQQALTGETPEVLKNSPASPIPLPDVVLTCNNICNTLLKWYENLAKELNVPLINIDVPFNHEFPVTKHAKQYIVGEFKHAIKQLEDLCGRPFDYDKFFEVQKQTQRSIAAWNKIATYFQYKPSPLNGFDLFNYMGLAVAARSLNYSEITFNKFLKELDEKVANKKWAFGENEKSRVTWEGIAVWIALGHTFKELKGQGALMTGSAYPGMWDVSYEPGDLESMAEAYSRTYINCCLEQRGAVLEKVVRDGKCDGLIMHQNRSCKNMSLLNNEGGQRIQKNLGVPYVIFDGDQTDARNFSEAQFDTRVEALAEMMADKKANEGGNH
>CP027570.1|AVO74392.1|1131240_1132017_+|2-hydroxyglutaryl-CoA-dehydratase
MYTLGIDVGSSSSKAVILEDGKKIVAHAVVEIGTGSTGPERVLDEVFKDTNLKIEDMANIIATGYGRFNVDCAKGEVSEITCHAKGALFECPGTTTILDIGGQDVKSIKLNGQGLVMQFAMNDKCAAGTGRFLDVMSKVLEIPMSEMGDWYFKSKHPAAVSSTCTVFAESEVISLLSKNVPKEDIVAGVHQSIAAKACALVRRVGVGEDLTMTGGGSRDPGVVDAVSKELGIPVRVALHPQAVGALGAALIAYDKIKK
>CP027570.1|AVO74391.1|1130300_1131215_+|VOC-family-protein
MKPMRLHHVGIVLPTLEKAHEFMQNNGLEIDYAGYVDAYQADLIFTKFGEFASPIEMIIPHSGVLTQFNGGRGGIAHIAFEVDDVEAVRQEMEADCPGCMLEKKAVQGTDDIIVNFRRPTTNQGILVEYVQTTAPITGRGENPFVKNLGPEKGKLNETWHPMRLHHIGIVLPTLEKAHEFIKTNGLEVDYSGFVDAYHADLIFTKKGENSTPIEFIIPREGVLKDFNHGRGGIAHIAFEVDDVEKVRQIMESQKPGCMLEKKAVRGTDDIIVNFRRPSTDAGILVEYVQTVAPINRSNPNPFND
>CP027570.1|AVO74390.1|1128720_1130274_+|3-oxoacid-CoA-transferase
MRKVEIITAEQAAQLVKDNDTITSIGFVSSAHPEALTKALEKRFLDTNTPQNLTYIYAGSQGKRDGRAAEHLAHTGLLKRAIIGHWQTVPAIGKLAVENKIEAYNFSQGTLVHWFRALAGHKLGVFTDIGLETFLDPRQLGGKLNDVTKEDLVKLIEVDGHEQLFYPTFPVNVAFLRGTYADESGNITMDEEIGPFESTSVAQAVHNCGGKVVVQVKDVVAHGSLDPRMVKIPGIYVDYVVVAAPEDHQQTYDCEYDPSLSGEHRAPEGATDAALPMSAKKIIGRRGALELTENAVVNLGVGAPEYVASVAGEEGIADTITLTVEGGAIGGVPQGGARFGSSRNADAIIDHTYQFDFYDGGGLDIAYLGLAQCDGSGNINVSKFGTNVAGCGGFPNISQQTPNVYFCGTFTAGGLKIAVEDGKVKILQEGKAKKFIKAVDQITFNGSYAARNGKHVLYITERCVFELTKEGLKLIEVAPGIDIEKDILAHMDFKPIIDNPKLMDARLFQDGPMGLKK
>CP027570.1|AVO74400.1|1141688_1142117_+|Hsp20/alpha-crystallin-family-protein
MNSLFPIVDNEFSVPDVFDNFFNRFMWPSEFTSTMPKVDIEDKGSEYVMTADLPGVQKEDIHLSYDNNVLTLAASHNEQKDSQDDQHNYICKERSSSSFCRQFPVTGIQKEGIQAAFKDGVLTITLPKDAQQAQPTNTIEIQ
>CP027570.1|AVO74401.1|1142560_1143208_+|cupin-domain-containing-protein
MKERKGCVFSISQDNEPVAGCTISKDVVHQADCQVLYFSLAAQTDISPETYDQVKILYVTAGMLCLYGPEGEREVPQGQVYIARPGIPVGMKSLHGAVYVEITVKEETLMNIDTGKLFSLAGLVPCQDGKIINRDIIQSPKVKFVVMSFGAGTGLSEHAAPGEALIFALEGKAVIRYEGEDHEIKAGENFAFAKNGRHAITADGPFKMALLLTLE
>CP027570.1|AVO74402.1|1143243_1144575_+|MBL-fold-hydrolase
MGKKITNKVTWVGKIDWELNEFHGHEYSTEKGSSYNSYLIRDEKTVLMDTVWKPFDDEFVANLKKEIDLKDIDYIVMNHNENDHSGALPALMREIPDTPIYCTKKGEAILRGLYHQDWNFVNVKTGDTLDLGGSQLVFIEAAMLHWPDTMFTYMTGENILFSNDGFGQHYASERMYNDCVDQAELYQEAMKYYANILNLYSPMVTRKIDEILKMDVPVSMICPSHGVIWRKDPLKIVAKYQEWAKAYQENQITIIYDTMWNSTRRMAECIAEGLRETDPTLTVKLFNSAVDDKNDIVTEVFKSKAILVGSPTINYGFLFSIGGIMEMIRGLKFKNKKAAAFGSYGWSGEAVKQITALLQGAGFDVVNDGLRCQWNPDQATQDTCRQYGRDFAAAVSASEAKEDEVPTELGDYNNDEQIGQAAKEHFKDWEKDAREGVKGGFAG
>CP027570.1|AVO74403.1|1144685_1145915_+|iron-hydrogenase
MKTLDELYQQMLKRAAEGKPVGVDGDPKLIDCLAHPDDHPLIWRVKPCLCPPDEPHHCQEACDWGAITSGPDGIAIDDSQCVGCQACVDACKLDTLKTRKDIIPVVQELHDYDGPIYAMVAPAVSGQFGPDITMGKLRTAFKRLGFTGMLEVAVFADILTLKEALEFDKNINSEDQFQLTSCCCPMWIAMIKKLYHQLLPNVPGSVSPMIAGGRTVKALHPKAKTVFIGPCLAKKAERKEPDLVGAVDYVLTYQELRDLFSVTNIDLASLPEDNLPHASEAGISYAYAGGVSEAVTETVHQLNPDRQVDIKTRKADGVPACKAMINDILAGNRDGNFFEGMGCMGGCVGGPRAIIKKEEGKANVQAYGKQAAYKTPMENPYVIELLKKLGFPTVEEFLERSHLYDRKFD
>CP027570.1|AVO74404.1|1146046_1146709_-|uracil-DNA-glycosylase
MEENEKMKDWLAGLMSCTSCHLRDEGNRGPTRYSGDCASPLMFVGEGPGGVEDEYGVPLVGPSGQLLDKALWSVGLTRDHVYVTNIVKCRPKNNRTPTLEEGRHCADIHLVKEIELVQPKVIVCLGKVAFQYFYGRAASIMRNRGKWFTWRGYDIMPTYHPAFLLRQTGHELVESKWQVYYDFKAAVEKAKAAIPDYIYQSPEKPDLLTEYAALKETRHL
>CP027570.1|AVO74405.1|1146818_1147613_+|carbon-nitrogen-family-hydrolase
MKISLIQFPIVTGDRPANFAQVRSHVHTAAAAGSDLAVLPELWDLSFYPPDVFDLADEGGRQGREFLQDLAASCHIQLVGGSLVRRQQGKLYNTTYIIDEEGNLVSSYDKCHLFTPGGEEKVFTPGDHLNTFFLGDVPMASITCYDLRFGEWVRMAALAGAKILFVPAAWPHPRLAHWQILNRARAIENQLFVVAVNSCGTCGDYHFCGHSMIIDPWGEVLAEGGDGEVVVTGEIDLSVIDDIRSRINVFRDRRPELYQLEGKR
>CP027570.1|AVO74406.1|1147614_1148562_+|transporter
MEGVLHGLQGIFEVLFIISIGFILAKKGWFGPDMSAVFTKLVMKISLPLYMLCQLEKDFTHDSLIRIAPDLLLPFASILLAYAVGRVAAKVLHIRQERQGVFITCFFIANTIFIGLPVNLALFGTQSVPSVMLYYMANTTMFWTLGVYHIVNDSLGGKGSMPLFSLQTLKKVFSPPLLGFLAGLALIMANIKLPDFLLTSFQYVGNMATPLSLMVIGIEMTGISLASVRWDRDIIGALVGRFLVCPACVLVLLPFIPVTPMSAQVFTMQASMPAMTQMTVVAKSVGADVRYSTEVSFITVVMGIIVIPLYMFIIG
>CP027570.1|AVO74407.1|1148580_1149759_+|M20-family-peptidase
MNTLEDLKKALKAHEAQAFQLNYTIADDPELSGEEYHACQHYVDLCRSLGMEVEDQFTGQPTAFRAVAHRADKPVFKMALLAEYDALPGVGHGCGHSANGAMSFLAAAALKDLADLPVDVDLIGTPDEELRGGKVIMCDQGVFKDYDFAVMVHISPTKTNANSHFLALDDYRIAFHGQTAHAAGEPWNGRNALNGAMLALHAIDMLRQHVRPETRIGSYIVNGGMASNVVPDYAEIECCIRHSEREYLDTVVAKVMNCFKGAAIATETTYDVSQMGCKFDNMVWNEAATKASEQVLQAMDIPYEYPTDCGSSDVGNVSHQCPAVHVHLALGDVPMPEHSTDIANAVKARTIEPTIVKGAEIMGRLALLFAQDAALRQQMKDEFMSNGLSCNH
>CP027570.1|AVO74408.1|1149852_1151202_-|NADP-specific-glutamate-dehydrogenase
MNKYLESVIENVRTKHANEPEFVQTVEEVLSSLDPVVERHPEYEKFDLLNRLVEPERQFTFRVVWQDDKGEYHTNTGYRFQFNGAIGPYKGGLRFQKNVYSGIIKFLGFEQIFKNALTGLPIGGAKGGADFDPTGKSDAEIMRFCQSYMQALYRYIGPDIDVPAGDMGVGGREIGYLFGEYRRLKGCFENGVLTGKGFSFGGSRIRPEATGYGAVYYLENVLKDDGQDIKGKTIAAAGFGNVTWGICKKATELGAKVVTLSGPDGYIYDPDGVATQEKIDYLLEMRNSGRNRVQDYADKFGVEFFPGEKPWGRKVDIIMPSAMQNDVHLEQAKQIAANKIRYYIEVANMPTTNDALKFLLDQKDIIVAPSKAVNAGGVATSALEMSQNSERLVWTAKEVDDRLHEIMNTIYQNCKDAAARNGLGYNLVAGANIAGFERVADAMLAQGVF
>CP027570.1|AVO74409.1|1151655_1153569_+|fructose-bisphosphatase-class-III
METYDTYSPEYLRYLELLSKEYPTQAATFTEIINLQAIVNLPKGTEHFMSDLHGEYEAFYHILNNCSGVIREKVEMIFSDKMSKAEQDDLLTLIYYPKEKLNMLYREGKVNDDWARTTLERMIDLAKLLSSKYTRSKVRKAMPEVFRFVIDELLHAQPDEDQNQLVYHMKILDTILETGSTRQFIYALANLIKRLAVDHLHIIGDIYDRGAHADKIMDTLMHHHSLDIQWGNHDVLWMGAAAGNAACIANVLRNNIRYHNMEILESGYGISLRPFALFALDTYKQDDGMEPMVKAINVIVAKLEGQTIYRHPDYNMDDRLLFHKIDWEKGVITLGGKTYELKTKDFPTVNPQDPYTLSPEEHQLMNDIQVEFTESERLQRHIRFLYSHGSLYRCMNNNLLFHGGLPLNEDGSFKEIYLDGKPYKGKAFMDKAEHLIRRAYDQRDTDSLDYMWYLWCGADSPVSGRIVKTFERSYIIDESTWKEPQNAYYRLNRDKDECIKILHEFGIDSPQGHIINGHTPVKVKKGESPIRAEGKEICIDGGFCKAYQGSTGIAGYTLIFNSHGIRIKSHYPFEDVYQALMNNVDIDSESTQVELEPKRVMIGDTDNGKKLLQMIRDLKALLEAYRQGVILERRPNP

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Crispr_ID: CP027570_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027570_6

1294155-1294291

Orphan

Consensus_repeat	Method
CCCTCAGCGCGTGGCGGGCCGCCTTTACAGGACGGCCCCTACGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027570_6

>merge|CP027570|6|1294155-1294291|CRISPRCasFinder
CCCTCAGCGCGTGGCGGGCCGCCTTTACAGGACGGCCCCTACGGATGCCGTTGCACAACGGCACCTCAAACTGACAACGACGCTTCGGGGAGCCCTCAGCGCGTAGCGGGCCGCCTTTACAGGACGGCCCCTACGGA

>CP027570|6|6|1294155-1294291|CRISPRCasFinder
CCCTCAGCGCGTGGCGGGCCGCCTTTACAGGACGGCCCCTACGGA	TGCCGTTGCACAACGGCACCTCAAACTGACAACGACGCTTCGGGGAG
CCCTCAGCGCGTAGCGGGCCGCCTTTACAGGACGGCCCCTACGGA

Protein	Signature genes	Signature genes Name	Protein_function
CP027570.1\|AVO74532.1\|1303790_1304471_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|223816
CP027570.1\|AVO74524.1\|1283901_1284807_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227193
CP027570.1\|AVO74528.1\|1289906_1290131_+\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO74523.1\|1283085_1283898_+\|TIGR00159-family-protein	unknown	unknown	gnl\|CDD\|224539
CP027570.1\|AVO74538.1\|1308425_1309046_+\|dihydroxyacetone-kinase-subunit-L	unknown	unknown	gnl\|CDD\|274099
CP027570.1\|AVO74536.1\|1306656_1307190_+\|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR	unknown	unknown	gnl\|CDD\|235365
CP027570.1\|AVO74537.1\|1307420_1308410_+\|dihydroxyacetone-kinase-subunit-DhaK	unknown	unknown	gnl\|CDD\|237724
CP027570.1\|AVO74535.1\|1305723_1306641_+\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
CP027570.1\|AVO74521.1\|1281297_1282287_+\|inorganic-phosphate-transporter	unknown	unknown	gnl\|CDD\|376541
CP027570.1\|AVO74522.1\|1282494_1282971_+\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
CP027570.1\|AVO74531.1\|1302376_1303807_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|274368
CP027570.1\|AVO74525.1\|1284833_1286426_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225307
CP027570.1\|AVO75605.1\|1291150_1292593_+\|hydrogenase	unknown	unknown	gnl\|CDD\|274171
CP027570.1\|AVO74530.1\|1300457_1301372_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
CP027570.1\|AVO74526.1\|1286426_1287782_+\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|100095
CP027570.1\|AVO74529.1\|1300179_1300461_+\|transposase	unknown	unknown	gnl\|CDD\|366690
CP027570.1\|AVO74533.1\|1304984_1305149_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274983
CP027570.1\|AVO74534.1\|1305275_1305713_+\|signal-peptidase-II	unknown	unknown	gnl\|CDD\|184823
CP027570.1\|AVO75606.1\|1292776_1293775_+\|phosphotransacetylase	unknown	unknown	gnl\|CDD\|236609
CP027570.1\|AVO74527.1\|1288054_1289884_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729

Protein	Function_ID	Function_description	E-value
CP027570.1\|AVO74532.1\|1303790_1304471_-\|DNA-binding-response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	7.63208e-84
CP027570.1\|AVO74524.1\|1283901_1284807_+\|hypothetical-protein	gnl\|CDD\|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	1.0341e-24
CP027570.1\|AVO74523.1\|1283085_1283898_+\|TIGR00159-family-protein	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	5.02693e-78
CP027570.1\|AVO74538.1\|1308425_1309046_+\|dihydroxyacetone-kinase-subunit-L	gnl\|CDD\|274099	TIGR02365, dha_L_ycgS, dihydroxyacetone kinase, phosphoprotein-dependent, L subunit. Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated EC 2.7.1.29. By contract, E. coli and many other bacterial species have a multisubunit form (EC 2.7.1.-) with a phosphoprotein donor related to PTS transport proteins. This family represents the subunit homologous to the E. coli YcgS subunit.	3.09116e-81
CP027570.1\|AVO74536.1\|1306656_1307190_+\|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR	gnl\|CDD\|235365	PRK05205, PRK05205, bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR.	1.9109e-88
CP027570.1\|AVO74537.1\|1307420_1308410_+\|dihydroxyacetone-kinase-subunit-DhaK	gnl\|CDD\|237724	PRK14481, PRK14481, dihydroxyacetone kinase subunit DhaK; Provisional.	0
CP027570.1\|AVO74535.1\|1305723_1306641_+\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	1.13229e-125
CP027570.1\|AVO74521.1\|1281297_1282287_+\|inorganic-phosphate-transporter	gnl\|CDD\|376541	pfam01384, PHO4, Phosphate transporter family. This family includes PHO-4 from Neurospora crassa which is a is a Na(+)-phosphate symporter. This family also contains the leukaemia virus receptor.	6.20206e-102
CP027570.1\|AVO74522.1\|1282494_1282971_+\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	8.34437e-36
CP027570.1\|AVO74531.1\|1302376_1303807_-\|sensor-histidine-kinase	gnl\|CDD\|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	1.46492e-59
CP027570.1\|AVO74525.1\|1284833_1286426_+\|hypothetical-protein	gnl\|CDD\|225307	COG2509, COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only].	2.67378e-136
CP027570.1\|AVO75605.1\|1291150_1292593_+\|hydrogenase	gnl\|CDD\|274171	TIGR02512, Periplasmic_hydrogenase_large_subunit, [FeFe] hydrogenase, group A. This model describes iron-only hydrogenases of anaerobic and microaerophilic bacteria and protozoa. This model is narrower, and covers a longer stretch of sequence, than pfam02906. This family represents a division among families that belong to pfam02906, which also includes proteins such as nuclear prelamin A recognition factor in animals. Note that this family shows some heterogeneity in terms of periplasmic, cytosolic, or hydrogenosome location, NAD or NADP dependence, and overal protein protein length.	0
CP027570.1\|AVO74530.1\|1300457_1301372_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.1151e-63
CP027570.1\|AVO74526.1\|1286426_1287782_+\|phosphoglucosamine-mutase	gnl\|CDD\|100095	cd05802, GlmM, GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily. It is required for the interconversion of glucosamine-6-phosphate and glucosamine-1-phosphate in the biosynthetic pathway of UDP-N-acetylglucosamine, an essential precursor to components of the cell envelope. In order to be active, GlmM must be phosphorylated, which can occur via autophosphorylation or by the Ser/Thr kinase StkP. GlmM functions in a classical ping-pong bi-bi mechanism with glucosamine-1,6-diphosphate as an intermediate. Other members of the alpha-D-phosphohexomutase superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
CP027570.1\|AVO74529.1\|1300179_1300461_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	5.87148e-05
CP027570.1\|AVO74533.1\|1304984_1305149_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274983	TIGR04105, hypothetical_protein, [FeFe] hydrogenase, group B1/B3. See for descriptions of different groups.	9.72289e-09
CP027570.1\|AVO74534.1\|1305275_1305713_+\|signal-peptidase-II	gnl\|CDD\|184823	PRK14793, PRK14793, lipoprotein signal peptidase; Provisional.	1.38833e-42
CP027570.1\|AVO75606.1\|1292776_1293775_+\|phosphotransacetylase	gnl\|CDD\|236609	PRK09653, eutD, phosphotransacetylase.	3.73874e-106
CP027570.1\|AVO74527.1\|1288054_1289884_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0

>CP027570.1|AVO75606.1|1292776_1293775_+|phosphotransacetylase
MSRYITSLKQQAARKPQKIVLPESDDVRILQAADRVLAEHLAVPVLLGKERDIQELASRYQLDLDGAEVIYPKKYRMLEDLAQTYADKRKAAGMTLEESRRFLLNHPLYFGAALVAAGEAAGMVAGMETPASEVLRAALQLIGTRDGIDTVSSSFIVVTDMMQFGNDGVFVVGDGDVIPDPDEYQLADIACNCVDRARRTLHIASPKVALLSYSTMGSERGAGADKVRRAVQILSDRNVDFLYDGEMEADVALVPAYAADWAPRSPVAGQADVLVFPDLNTGNICCKMLEHVAGAKVLGPLLQGLAKPVMDLSRASTVDTIVDTIVICCCDA
>CP027570.1|AVO75605.1|1291150_1292593_+|hydrogenase
MQAEKKRDIAFTSRFEKLDRRVAVENRNISIQFDPEKCKNCTLCRRRCADVMSMTGYYSLESTGDVPICVHCGQCSLTCMFGATTTVSQRDAIQKAIDDPKKIVIFQTAPAVRVALGDEFGLPFGSVVQGKMIAALRALGGDYVFDTNFGADLTIMEEASELLYRMHNKKELLPQFTSCCPSWVEFTEIFFPELIPHLSTAKSPISMLSPMIKTYFAKRMKIDPADIVTVCVTPCTSKKAEIARPERNAAGRYWKKPEIRDTDYCITTRELAKWIKDAQIDFNSLKDSDYDPIFGQSSGGGTIFGNSGGVMEAALRTLVYLQTGKPADEEFLHFEEVRGLEGVKEAALTLDNDIIRVVAISGLANARRFINLMEEKHSWKKYAFIEVMACPGGCIGGGGQPRTKLPQEIPAKRARIESLYGLDALKQIRASWENPEIQTLYTKFLGEPLSDLSESLLHTQYINKHYMLGKEDKVQPGVSH
>CP027570.1|AVO74528.1|1289906_1290131_+|hypothetical-protein
MMFEVMAFKFCPIHIKHQTFNFKLKKRCLHATALFFVPFILRSAGESSLSSGKRRGLLLFAVYYTQRNDSDDCR
>CP027570.1|AVO74527.1|1288054_1289884_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGYIGDREAADFLMDGLAKLEYRGYDSAGIAVYHDGAIAVRKKAGRLVNLAEAVKAHPVVGTVGIGHTRWATHGGPSDVNAHPHTDEKGDFAIVHNGIIENYMELKEELLKKGYHFKSETDTEVVAHLCADMYDGDFTSTVRKVLSRLRGSYSLVFMCKFEPDKIICSKKDNPLIVGLGQGENYIASDIPAILSYTRKTYIMNDGEIAIVMKDNVWVTDLEGKPISKKVFEVNWDAEAAEKGGFEHFMLKEIYEQPKAIKDTMSCRITKDGKHVHFEELNWTPEDVNSIGKILITACGTAYHAGLLAKYFIEKLARIPVEVDIASEYRYRDPLTDSKTLCIVVSQSGETIDTLAALKEAKRRGARSLAITNVVGSSISREADQVAYTWAGPEIAVASTKAYTTQLVTLLLLSLYMGRLNGNLSVEREEKILADLTKLPDQCQGVFDQVDTIKGLCDAFKNKEDVFFIGRSMDYGLAMEGALKLKEISYIHAESYAGGELKHGTLSLIEAGVPVIALATQVEVEEKMISNIKEVKARDAYVVGVVQEGDTEVGKTVDALIKVPASDDFVIPILAIIPLQLLAYYIAVSRGNDVDKPRNLAKSVTVE
>CP027570.1|AVO74526.1|1286426_1287782_+|phosphoglucosamine-mutase
MARLFGTDGVRGIANDSLTPELAYHLGRAAAYIFGQNKEHPTFLIGRDTRRSGTMLADILAAGIASAGGDCYMVGVIPTPAIAYLTRTHHMDAGVMISASHNPFEYNGIKFFDGFGYKLPDETEDKIEECMLKDERAALQSRPTGAAIGTISTWTDLQQEYADFICKSTDIDLSGLKVVHDGANGSASVLGPEILKRLGAEVIAIHHEPNGVNINEKCGSTHLESLKETVLKYGADVGIANDGDADRCLAVDEKGQEMDGDQIMLLCAMKLKAEGRLKQDTVVGTVMSNIGFHKALKEMGCKTEITAVGDRYVLEKMRKDGYSLGGEQSGHIIFLDYNTTGDGLLTAVQLLSIMKQQNKPLSELAGLMTRYPQILKNVRVQTKSGWEDNNLIMAAISAGEEELGDEGRILVRPSGTEPLIRVMAEGPDLDQLERIVDDIAVVVEHEMGPSK
>CP027570.1|AVO74525.1|1284833_1286426_+|hypothetical-protein
MNIRTAVPMQKPLAALVAKKLRCSRSDISGLTIVRRSIDARRKPRIYFVFTVDVSFADEDRVWKRCRDNKDVRRLTETPAPEIHPGTQPMAHRPIVIGTGPSGLAAALALAEHGYAPIVFERGCDVDTRTKDVETFWRGGPFKASSNVQFGEGGAGTFSDGKLTTRVNHPLLRRILQTFVDAGAPEDILYAYNPHVGTDVLRRVVKNMRHTIEARGGEVHFSSCVTAIHRDDEGRITSVTVNDSDEYPAELVVMGIGHSARDTYYMLHDQGVTLEKKPFAVGVRIEHSQDVIDRAQYGCPAADLGLEPADYALVYHSPEGRSCYSFCMCPGGVVVGAASEEGRVVTNGMSLYRRDSGIANSAVVVNVTADDMGGDSPLAGIEFQRRYEELAYKAGGSCYYAPAQTVGSFLKRPGAPQEGPVHSYRPGVTWTDLHDVLPGFVTTTLEQALPYFGRRIHGFDDDAVVMTGVETRTSAPVRIVRGEDRMALGAAGLYPIGEGAGYAGGIMSAFLDGLETAIEIIRKYQPLEVK
>CP027570.1|AVO74524.1|1283901_1284807_+|hypothetical-protein
MNKLDKKWQLKIVCLLLAIVLWFVIINEQNPLSEGSYTVPITVENLDSQYITSNVPKTVYVRLSGPRNTIINVGPSDIKAYIDLSNVQEGEVEVPVHVEIPGGTELKKQSMTSTKITVDVYTVKEFKLTPHVVGKLDDKDFISDLKIVPEKVVVSGARRLIQQVNQAVVDIPVNQRNGDFAIMAPIHLYQADGTPVEGLEMTPWQSNVKVTIAHNAITKTVPLNLNVQGETAWKTVSVQPTAVVVKGEADTLKNIDTIDLPDIDIENMTEEKTWKVLIPPIDGVVMDPDEVDATLSIKKEK
>CP027570.1|AVO74523.1|1283085_1283898_+|TIGR00159-family-protein
MYLPFQGFISSFRLLDILDILLVAFVLYKLFILIRNTRAVALIKGLLVLGVVTVVSKILDLHVINWMLQQGMTVILVALPVVFQPELRRALEQIGRGRFFRSGQVISMEELERLIDEIVAISESLSKTHTGALIVFEREVGLNDYIDTGIAIDGLVSRELLGNIFIPNTPLHDGAVIIRENRIMAAGCLLPLTSDRSLSTELGTRHRAAIGISELADAVVVVVSEETGSISYTYGGHIYRHLDGNALRNVLKTFLNRTPQGLANIFKWRP
>CP027570.1|AVO74522.1|1282494_1282971_+|Rrf2-family-transcriptional-regulator
MRLNQATDYAFRMVLYLASLPEGTKITGAALAEKQNIPERFLLKIMRSLTKAGIMKSYRGVEGGFALQRAPKDITLFDIIDAVEGQTELQRCLHDIGSCSRGCSGMCSIYAAFADIQRDLAARLKSIDFETLAKQEANLRMVHEAEAQLTAKKEAAEK
>CP027570.1|AVO74521.1|1281297_1282287_+|inorganic-phosphate-transporter
MPEHWLIWAIVLLAVLFDYINGFHDTANAIATSVSTRAITPRHAIMMAACLNFAGAMISTGVAKTIGGDLVLNPAEISLEVIVAALIGSIIWNVLTWYYRIPSSSSHSLIGGVIGAVCISVGPAALDMGGIGKIILSLILSPVVALATGYFVMIGILWIVRKYSPLALNRQFRKMQLLSASLMAFSHGSNDAQKAMGIIALALLSGGYIETMEIPIWVKMACATSMALGTSAGGWRIISTMGTKIFKMESINGFAADLNSSIVIFTATFLHLPVSTTHVVSGSIMGIGSAERVRAVHWGVARSMLVAWVVTIPISAVMSAIIFKIIDFL
>CP027570.1|AVO74529.1|1300179_1300461_+|transposase
MAKFNKEFKINAVKYYHEHRELGLVGCATNLGIAPQTLSRWQKQLKDNGEMPYRGSGNYASDEAKEIARLQRELRDAKDALNVLKKAISILDK
>CP027570.1|AVO74530.1|1300457_1301372_+|IS3-family-transposase
MTIAIYRSVQEEAENAHQAERRFSVSGVLSELDVSSSGYYDWAARKPSKQAQHRKEMKKKIQTIYDDSKQIYGAPKIAQVMQQNGDSISERTVGVYMRQMGIQACWVKHYTVTTRNSDFDVALVNILQECFNPEEPDQVWCSDITYIWTAEGFVYLESIMDLFSRKIIAWNLARNLDVAGIVKMLQEAKQCRKPGQLLVIHSDRGCQYVSQAYIRETSQMRRSYSKKGYPWDNACIESFHSLIKREWLNRFKIQNYQQAYLLVFEYINTFYNTVRIHSHCNYMSPDDYEKLYADFQKHNMRLGI
>CP027570.1|AVO74531.1|1302376_1303807_-|sensor-histidine-kinase
MWQKINHWLTQHLLIAPLPIFAKMVLLYSSIVFFILLTVSVVTITSVHYIMNDSLRDELKSRAAAAVHYLDDYGKVDTTIFVRANVPPSMNLQIYDGAGHLIVDNGPTHAVRKMSDRYIDDAISNPQKNPLPAAVQGNESSEFSYYRIWTSKDGKNYYLRFSQRPDKETGFVSLLSKQLLASVLISLILTIFTGMYLMKKSLAPLQVINDTVKTIEVNRLDNRIALSDDKNELHELAVSINQALDRIEYGYKQQQQFISDASHELRTPITVIAGYADLLCRWGKEDPAVLNESLAAIKSETDYMKQLIERLLFFARSNNGTLIKHFTDINTADLLQEVYSEISLIDKEHHIRLSQNDQALITAEPGSVKQMLRIFIDNALKYTPAGGTVTLSCQADDQTVRYIISDTGIGIPKKDLERVFERFYRVDSSRTKDTGGSGLGLSIAKYIAKANNAKLGLDSTLHKGTTVTAIFQRTVS
>CP027570.1|AVO74532.1|1303790_1304471_-|DNA-binding-response-regulator
MNENTHILIVEDEKQIARFLQMELEHEGYICSIEYNGAAALDRIGQEHFDLILLDIMLPDVDGLTICKRTRELSNIPIMMLSAKDDIETKVVSLDIGANDYLTKPFNSKELFARIRVLLRERHQLADRGNFLQLNDLTLFLDRHEVMKGTKKIKLTKKEFELLAYLVRNKNIVLSRSRIVEEVWGYDYIGDTNIVDVYIRYLRSKLGPNGRTYIRTVRGVGYVAED
>CP027570.1|AVO74533.1|1304984_1305149_+|4Fe-4S-dicluster-domain-containing-protein
MHVISDECVKCGACASTCPTGAIEEGETKYVVTDSCIDCGACESACPTGAISAE
>CP027570.1|AVO74534.1|1305275_1305713_+|signal-peptidase-II
MYVLGIALAVTVVDQLTKLAVQQDMVLHESIPVIPGFFHITYILNRGAAFGILENQQWFFLVIALVLFLLYGLFRKQLPANPWVYGGSGLLLGGALGNALDRTFRGAVTDFFDFRIWPVFNVADIGIVVGVVLLLWYSWTHISDK
>CP027570.1|AVO74535.1|1305723_1306641_+|RluA-family-pseudouridine-synthase
MEEKNLIVTEQEQGKRLDVYLTSALDISRSYAQQLIQRQGVTVNGKDAKANRRLNEGDRVKAVIEVQEEYKVVPQDIPLDIVYEDKDIIVINKARGMVVHPAAGNPDGTLVNALLYHCQGELSGINGVIRPGIVHRLDKDTSGVMVAAKTDEAHKGLAEQIKAHSAHRTYWALVHGNISEERGIVDAPIGRHPKDRIKMAVTFKGGREAVTHFKVLKRYGDYTWVECKLETGRTHQIRVHMAYIHHPVVNDPLYGYKKDDFPIEGQALHSHCLDLVHPITGKAMHFEAPAPADFLACLKRAEEKD
>CP027570.1|AVO74536.1|1306656_1307190_+|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR
MWKEKTLLMDEKAIGRAIRRIAHEIIERNKGLDKTVLVGIHTRGVPLAQRLGRELAAIEGRHVPVYDLDISAYRDDDRKSPIAVSDAGKFDADGKTVVLVDDVLFTGRTVRSALNAIMELGRPQFIELAVLVDRGHRELPIRADYVGKNVPTSRKEDVSVQLKETDSCDRVVLREEN
>CP027570.1|AVO74537.1|1307420_1308410_+|dihydroxyacetone-kinase-subunit-DhaK
MKKIVNDVNNVEEEMIQGLVKSAPKKLRKLDYGTIVVRADKKEGKVALVSGGGSGHEPAHAGYVGTGMLDCAVAGTVFTSPTPDQVLEGIKAVATDKGVLCVVKNYTGDVMNFEMAIEMAADEDIKADYVVVNDDVAVRDSLYTTGRRGVAGTIFVHKIAGAKAEQGAELPEVKAVAEKVIANVRSMGMAIEPCTVPAAGKPGFELADDEMEIGIGIHGEPGTHREKLRPANEIAKMLVDQILADLDYKGHEVVVLINGMGGTPLMELYIVNNFVQDYLKEQGIAVYDTMVGNYMTSIEMAGFSITLLRLDDELKGLYDEPADTLAWKK
>CP027570.1|AVO74538.1|1308425_1309046_+|dihydroxyacetone-kinase-subunit-L
MDTKQMAAIIEGMAKKIEAEKDYLTQLDNEIGDGDHGINLARGFEAVEKKLPSLAGGDIGALLKGVGMQLVSTVGGASGPLYGTAFMKAGMACKGLTELDGPAFVKAMEAAVDGIKMRGKATEGEKTMLDALCPALKVMQDEVAAGKSLKEALQDAAAAAEKGVEYTKTIIATKGRASYLGERSLGHQDPGATSSLYLLQVLAEMA

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Crispr_ID: CP027570_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027570_8

1848485-1848568

Orphan

Consensus_repeat	Method
GTAGGGGCTCGCACGTGGCGAGCCCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027570_8

>merge|CP027570|8|1848485-1848568|CRISPRCasFinder
GTAGGGGCTCGCACGTGGCGAGCCCGCCTGAGTCCGGCGGTAACGCACCAGGCCTCCGTAGGGGCTCGCATGTGGCGAGCCCGC

>CP027570|8|8|1848485-1848568|CRISPRCasFinder
GTAGGGGCTCGCACGTGGCGAGCCCGC	CTGAGTCCGGCGGTAACGCACCAGGCCTCC
GTAGGGGCTCGCATGTGGCGAGCCCGC

Protein	Signature genes	Signature genes Name	Protein_function
CP027570.1\|AVO75032.1\|1855338_1855893_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227064
CP027570.1\|AVO75022.1\|1845881_1847039_+\|S41-family-peptidase	unknown	unknown	gnl\|CDD\|223864
CP027570.1\|AVO75023.1\|1847174_1848446_+\|GTPase-ObgE	unknown	unknown	gnl\|CDD\|237046
CP027570.1\|AVO75015.1\|1835551_1838017_+\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
CP027570.1\|AVO75028.1\|1852115_1852712_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224627
CP027570.1\|AVO75031.1\|1854098_1854953_+\|RNA-binding-protein	unknown	unknown	gnl\|CDD\|225543
CP027570.1\|AVO75026.1\|1850124_1851369_+\|glutamate-5-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|234685
CP027570.1\|AVO75027.1\|1851516_1852158_+\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
CP027570.1\|AVO75014.1\|1833869_1835375_-\|sodium/proline-symporter-PutP	unknown	unknown	gnl\|CDD\|273981
CP027570.1\|AVO75020.1\|1843790_1844678_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|225088
CP027570.1\|AVO75016.1\|1839233_1839920_+\|DUF2993-domain-containing-protein	unknown	unknown	gnl\|CDD\|378597
CP027570.1\|AVO75018.1\|1841984_1843118_+\|polysaccharide-pyruvyl-transferase-CsaB	unknown	unknown	gnl\|CDD\|132648
CP027570.1\|AVO75033.1\|1855906_1856728_+\|pyridoxamine-kinase	unknown	unknown	gnl\|CDD\|180840
CP027570.1\|AVO75025.1\|1848978_1850109_+\|glutamate-5-kinase	unknown	unknown	gnl\|CDD\|235460
CP027570.1\|AVO75029.1\|1852714_1853683_+\|LytR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224235
CP027570.1\|AVO75024.1\|1848671_1848965_+\|ribosome-assembly-RNA-binding-protein-YhbY	unknown	unknown	gnl\|CDD\|376702
CP027570.1\|AVO75017.1\|1839943_1841992_+\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO75019.1\|1843114_1843801_+\|cell-division-ATP-binding-protein-FtsE	unknown	unknown	gnl\|CDD\|225438
CP027570.1\|AVO75021.1\|1844679_1845843_+\|peptidase-M23	unknown	unknown	gnl\|CDD\|366703
CP027570.1\|AVO75030.1\|1853713_1854097_+\|ribosome-silencing-factor	unknown	unknown	gnl\|CDD\|376779

Protein	Function_ID	Function_description	E-value
CP027570.1\|AVO75032.1\|1855338_1855893_+\|hypothetical-protein	gnl\|CDD\|227064	COG4720, COG4720, Predicted membrane protein [Function unknown].	3.86039e-16
CP027570.1\|AVO75022.1\|1845881_1847039_+\|S41-family-peptidase	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	4.60105e-105
CP027570.1\|AVO75024.1\|1848671_1848965_+\|ribosome-assembly-RNA-binding-protein-YhbY	gnl\|CDD\|376702	pfam01985, CRS1_YhbY, CRS1 / YhbY (CRM) domain. Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly. GFP fused to a single-domain CRM protein from maize localizes to the nucleolus, suggesting that an analogous activity may have been retained in plants. A CRM domain containing protein in plant chloroplasts has been shown to function in group I and II intron splicing. In vitro experiments with an isolated maize CRM domain have shown it to have RNA binding activity. These and other results suggest that the CRM domain evolved in the context of ribosome function prior to the divergence of Archaea and Bacteria, that this function has been maintained in extant prokaryotes, and that the domain was recruited to serve as an RNA binding module during the evolution of plant genomes. YhbY has a fold similar to that of the C-terminal domain of translation initiation factor 3 (IF3C), which binds to 16S rRNA in the 30S ribosome.	9.13144e-27
CP027570.1\|AVO75015.1\|1835551_1838017_+\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
CP027570.1\|AVO75033.1\|1855906_1856728_+\|pyridoxamine-kinase	gnl\|CDD\|180840	PRK07105, PRK07105, pyridoxamine kinase; Validated.	5.55622e-101
CP027570.1\|AVO75031.1\|1854098_1854953_+\|RNA-binding-protein	gnl\|CDD\|225543	COG2996, COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only].	7.07292e-76
CP027570.1\|AVO75026.1\|1850124_1851369_+\|glutamate-5-semialdehyde-dehydrogenase	gnl\|CDD\|234685	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional.	0
CP027570.1\|AVO75027.1\|1851516_1852158_+\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	4.43091e-78
CP027570.1\|AVO75019.1\|1843114_1843801_+\|cell-division-ATP-binding-protein-FtsE	gnl\|CDD\|225438	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning].	8.18387e-121
CP027570.1\|AVO75020.1\|1843790_1844678_+\|ABC-transporter-permease	gnl\|CDD\|225088	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning].	1.84938e-77
CP027570.1\|AVO75016.1\|1839233_1839920_+\|DUF2993-domain-containing-protein	gnl\|CDD\|378597	pfam11209, DUF2993, Protein of unknown function (DUF2993). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	9.68276e-06
CP027570.1\|AVO75014.1\|1833869_1835375_-\|sodium/proline-symporter-PutP	gnl\|CDD\|273981	TIGR02121, Osmoregulated_proline_transporter, sodium/proline symporter. This family consists of the sodium/proline symporter (proline permease) from a number of Gram-negative and Gram-positive bacteria and from the archaeal genus Methanosarcina. Using the related pantothenate permease as an outgroup, candidate sequences from Bifidobacterium longum and several from archaea are found to be outside the clade defined by known proline permeases. These sequences, scoring between 570 and -40, define the range between trusted and noise cutoff scores. [Transport and binding proteins, Amino acids, peptides and amines].	0
CP027570.1\|AVO75018.1\|1841984_1843118_+\|polysaccharide-pyruvyl-transferase-CsaB	gnl\|CDD\|132648	TIGR03609, S_layer_CsaB, polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). [Cell envelope, Surface structures, Protein fate, Protein and peptide secretion and trafficking].	2.01232e-92
CP027570.1\|AVO75028.1\|1852115_1852712_+\|HD-domain-containing-protein	gnl\|CDD\|224627	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism].	1.08142e-54
CP027570.1\|AVO75029.1\|1852714_1853683_+\|LytR-family-transcriptional-regulator	gnl\|CDD\|224235	COG1316, LytR, Transcriptional regulator [Transcription].	6.14769e-28
CP027570.1\|AVO75023.1\|1847174_1848446_+\|GTPase-ObgE	gnl\|CDD\|237046	PRK12297, obgE, GTPase CgtA; Reviewed.	0
CP027570.1\|AVO75025.1\|1848978_1850109_+\|glutamate-5-kinase	gnl\|CDD\|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	0
CP027570.1\|AVO75021.1\|1844679_1845843_+\|peptidase-M23	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	9.33159e-50
CP027570.1\|AVO75030.1\|1853713_1854097_+\|ribosome-silencing-factor	gnl\|CDD\|376779	pfam02410, RsfS, Ribosomal silencing factor during starvation. This family is expressed by almost all bacterial and eukaryotic genomes but not by archaea. Its function is to down-regulate protein synthesis under conditions of nutrient shortage, and it does this by binding to protein L14 of the large ribosomal subunit, thus acting as a ribosomal silencing factor (RsfS) by blocking the joining of the ribosomal subunits. This family is structurally homologous to nucleotidyltransferases.	3.39368e-48

>CP027570.1|AVO75023.1|1847174_1848446_+|GTPase-ObgE
MFIDRARIFVQSGKGGDGMSSFRHEKFVPKGGPNGGDGGQGGNVVLVADRNVNTLVDFRFRRLFKAKPGGKGEGSNKYGRNAEDLVITVPLGTIVKDEETGQVMADLSRDGQRAIVAKGGRGGRGNWHFRTSANRTPTFAERGEPGEERWLRLELKVLADVGLLGYPSVGKSSILRKVSAAQPEVAAYHFTTLNPILGVVNLPDHRSFVMADIPGLIDGASEGVGLGHDFLRHIERTKILIHVIDVSGIEGRDPIEDYEKINAELAKYSEKLSRKQQIVAANKIDLLGDSDNLERLMDYMAAHGVEVYPICAMTGEGMDKLLERVWTMLEEYVEEPDETTEEVVYKAQNKPDFEVKRDDDGAFVITGARIENLVAMTNFDDDQSLRRFQRIWRYMELDKLLQEHGIQDGNTVRIYSMEFEYHK
>CP027570.1|AVO75022.1|1845881_1847039_+|S41-family-peptidase
MGKRSLRQTWENVRRPLGYVCSGMIIMIVAMVGLFWYYTGRPSSMFEFFRTLEIIESHYAEDVDKNAIFDGALKGMVSTLGDKHSTYLGGDLYKDFSAQMSGTYAGIGVYIASTDDGILIAGVMEGSPAEEAGLQRGDILVSIDGTSVADYKLEDVSQRIRGPVDTSVDLVVRRDGEEQSFTVQRRQIHVPTVAGKMVDGTDVGYIRVAVFSEGTADDFTKEFTKLREQGMNKLILDLRDNPGGIVEQAVGVASNFVPPDSTIVSYTEQDGKVDQYTAQGTEDPIPLVVLVNENSASASEIIAGAVQDMKLGPIVGVKTYGKGTVQGVFPVDSSSAVKVTVAKYRTTNGREIDGVGIEPDVVVPLTPSDPEDSQFEKALEIIREK
>CP027570.1|AVO75021.1|1844679_1845843_+|peptidase-M23
MVRKYIILAVTAALLSPCLLSFADDDLQDQLDDVQTRMAEQSEKKAQAQMVIDNVSDKLYEIQKSLEAAQGEYRTVTADLAATEEKIAATQAELDENRARLEKREKVFTRRIRDVYMHGQLSYLDVVLGAKDFSDFSNRLELLRRVVDADISLISDIRRERAAIEAAQKELEVQRDRQTKLRDEAKAKRDEIASHKEEQQAVLYQAQTDKATAEKAYAEYQQASQSIAEMLRQRAPAAPDSSDQGESSDAGSSQPSGGGGTGAMIWPVNGVITSPYGYRTHPIFGTTIYHSGIDIGVDYGTPVQAADGGTVVEAGWVSGYGYAVVIDHGNGLSTLYGHNQELAVSAGQSVSQGQVIAYAGSTGNSTGPHVHFEVRANGDPVDPQGYV
>CP027570.1|AVO75020.1|1843790_1844678_+|ABC-transporter-permease
MKLRTMRYYMAEALQSFWRNRFMSIASIATVALSLFILGLFLTLVANLDYFAENLESQVEITVYLKDDVSQKDIDSVGRRLSALPDVKSVAFTDKDQAMDILKERMKDQPGILDALDGKNPLPSSYEVTFTEPEAVRRTADIVSDYPEVEGTHYGQEIVEQLFQITRIIRWGGIALIIFLTLAMLFIISNTIRLTVFARRKEIAIMKYVGATNWFIRWPFLLEGLLLGFIGGVLADLALWQFYGFAVTAIHQSLAFLPMVSVYPFMYRTAAILLVISMIIGALGSTISLKRYMKV
>CP027570.1|AVO75019.1|1843114_1843801_+|cell-division-ATP-binding-protein-FtsE
MIELKNVSKVYDNGSIALDHVSLHIGKGEFVFVVGASGAGKSTLIKLLSHEELPSRGSVFVNGIEVNKLAKSRVPYLRRKMGIVFQDFRLLPNKTAQENVAFAMEVIEAPRRLIRRRVRDVLDLVGLVGKADALPRNLSGGEQQRVAIARAIVNRPLLLIADEPTGNLDPETSQDIMEVFKKINHMGTTVLMVTHDKTLVDMMNKRVIEIDGGKVVRDEQKGGYDDET
>CP027570.1|AVO75018.1|1841984_1843118_+|polysaccharide-pyruvyl-transferase-CsaB
MTRVVISGYYGFANAGDEAMLAAIVGSLKDIIPDVSITVITGNCRMTRENHNVQAVHRLNFFAIAAAIRRCDILISGGGSLLQDVTSARSLYYYLWIMKIALFFKKPVMLYAQGIGPVRGAKARRAVRKVLQRVAVIGVRDADSKAELAAMGVTKPPVHVTADAVLSMHPVDKNIGLYILKKHGITGIRRRLGIAVRNWQDHDAYKEAIAAAADELQEKQDVHVIFIPMQYPADVEAGRDIASRMKTKAVVLDGHYTTVEFMSLMGCMDAVIANRLHALIFSAIMQVPATAVSYDPKIDSFINLIGDKVCGTTEDVEAADIVADVTKKLSLGHLAPEIKARLNHLRRQSLRNAYLALRILEGRKGVRKRLQQHRRSL
>CP027570.1|AVO75017.1|1839943_1841992_+|hypothetical-protein
MNKRSMLAMILAVFIGLVCALVMCVQRNAIEDKSMTIEQAMDYDAIVVMARNDGYDLDTALQMCRDAGVTSFTIYDATLNKLTQRGELSLVTKLGADLYYPQFGLTDKSYDYYLIGKPQSQKDLYFDEVVSDLKARLGDDKVKIMSNGQYRMAGIKGVMPGLGDVNLGILSADARTITDHGFHVILRPTNYSNPTKEQVAHFFDRADKIQNVSGIMFVGKEVLGYTPVNAERKTMLDYTADNLNDRDIPFYMIESVNQLQYNQQDGMYDLAGLVHYRTARVYAMAKEELEKITPEEAAMRYYISDLERNARVNLYPLYKKPLHGMNLTQTNLSYVKMVSQKLTDRGYTLGKASIMPPYYPNRLLLAITAAAAACGFVFVLNLLIPLSDRKNYILMAIGIVCAVIGAVVAKGALFLQVWAIGCATAAPTAAILLALDHWKKKKITRKLGYGRVVRDGTIGLFFAVAVAMIGGLYIAAMLGNIRFFMEFDFYRGVKLTFVLPLLLVAIGYLRRFPLMGQTIASPEDLKVFVKDFLNIPIKMGTILILAVLALAGVIFVGRSGHTAGVPVPGVEVAMRRFLENVLYARPREKEFLIGHPAFYLMVAALYRKWPQLLHFFLVIAAAIGVGSMVETFAHIRTPFLMSFIRGINGWVTGMVVGIGLIIAIAIVSYVTTWLGKQVAHRD
>CP027570.1|AVO75016.1|1839233_1839920_+|DUF2993-domain-containing-protein
MKKWMIFFVIVAAFLVGANSYAPQLAEVGLCQALSATLNLHSDDVRVQASPGAKIFLGDIDAITVHATNFQAGDLTFAHFDCNLYGVHFKPLLALADQEVRVTRAESGEMTASIRSEELEKFLVKKVEGLKDPQVSFEDDAVRVQGRVKLGGLVSAQADVRGHFGMKGSKLMFIPSSVTVEGMGMQISTTQMASADIYDFAGFPLGIQPDSVTMRDGLLTIHGQVSNS
>CP027570.1|AVO75015.1|1835551_1838017_+|preprotein-translocase-subunit-SecA
MFNKLIQRLLGNNTEHELKKMWPIVRRINDLEPKLAGLSDASLQEKTFEFKNRLANGETLDDILPEAFAVVREASRRVTGMRHFDVQLLGGIVLHRGDIAEMRTGEGKTLVATLPVYLNALTGKGVHVVTVNDYLATRDSEDMGRIYKFLGLSVGLIVHDLTYDQRRRAYNADVTYGTNNEFGFDYLRDNMVISEDQMVQRPLNYCIVDEVDSILIDEARTPLIISGPGEKSTDLYYTLAGIVKTFTKDDYTMDEKQKTIAPTDSGVAKVEKMLGISNMFDNEHLDLNHLVIQALRARFMMHRDKDYVVKNGEIVIVDEFTGRLMFGRRYSDGLHQSIEAKENVKVQGESKTLATITFQNYFRMYEKLAGMTGTAKTEEDEFNKIYKLDVYVIPTNKPAIRKDLPDVIYKTKNAKYRAVVREVKKRHATGQPILVGTTSINQSEILSQLLDKENIVHNVLNAKYHEKEAEIIKNAGQKGMVTIATNMAGRGTDIKLGPGVAELGGLMIIGTERHESRRIDNQLRGRAGRQGDPGTTQFFLSLEDDLMRIFGSDNISKFMDKLGMDEDEPITAKMITRSIEKAQKKVESHNFEIRKYVLEYDDVMNQQREVLYGQRRQVLTADSLRDTIMGMVDDIIHDGLDKYADEKLYPEEWDFAGLLAQMQQYFVPKNATTVEELENLSRVEVQDKLKQIAVDLYDERLKEIGETTMKELEKAIMLRVVDSKWMDHLDAMDALKEGINLRAYGQKNPLVEYKFEAYEMFEEMIDSIKRTVVTFLYHIQVTYSKPVPQAEDHLQGAHEVHEESKPVSAEDIKRDEEREKQ
>CP027570.1|AVO75014.1|1833869_1835375_-|sodium/proline-symporter-PutP
MMQYDVSILTAFALYLLVMLAIGVYYSRSQQRLSDYILGGRSLGPWITSMSAEASDMSGWMLMGVPGFAYSTGISAAWIAIGIAIGTYLNWQFVSQRLRNYTEVANNSLTMPDYLKNRFHDDKNIIRIISAIFILIFFLIYTSSGFVSGGKLFESVFGMDYFSALLLSAGVVVIYTFLGGFMAVCWTDFIQGCMMFLAIVLVPVVGMIAFGGCDAVMTRLAATAPNLLEMAPDTTTTGIIGIISALAWGVGYFGQPHILVRFMAIGDPTELKKSKHIAMTWVVISLAAAVLVGLVGKVVVPTPLAGADSEKVFLVMSRQLFPPFASGLILSAVLAAIMSTASSQLLVTASAISKDFYHTFIRKNASEKELIYVSRLTVLVVAACAIVLALNPNSYILTMVSYAWAGFGAAFGPTILLSLYWKRMTKNGALAGIIVGGLTVLIWKQFAWFGLYEIVPGFLFSLIAIYIVSKLDGEPSQEIQDEFEQAIHHTPKISVLHNEDT
>CP027570.1|AVO75024.1|1848671_1848965_+|ribosome-assembly-RNA-binding-protein-YhbY
MNNKDKKQLKGMASLMPAVVQIGKDGLSDAVIDSARAAITARELIKAHVLNNANLPTKETMEDLADMLGAELIQVIGHYGVLFKKKDKKSHFEFIKD
>CP027570.1|AVO75025.1|1848978_1850109_+|glutamate-5-kinase
MNSTSRDFGQKKRIVVKVGSSTISHATGKLNYQRMEHLVRELADLQNQGKQMILVSSGATNAGLAPLHMDHRPRSIREKQALAAVGQGVLMHTYERFFREYGQVVGQVLLTRMDSQDRSKFMNSRNALLTLLDMGVIPIINENDVVAVDEYKIGDNDTLSAMVSGLVDADLLILLSDIDGLYTDNPRTHADAKIIPVVDNIDKHIYEIAGDAGSSMGTGGMYTKIQAASIATAADVDMVIASGSEDGIISRICAGEEVGTLFKAKETPLHSKKRWLVSGSKAQGRLIVDEGCRNAIIDRGSSLLPVGITAVEGIFDEGDIVSVVYDGLTIAKGISNYSSVNINAIKGLQSADIPKVLGHNGIYEEVIHRDNLVAMY
>CP027570.1|AVO75026.1|1850124_1851369_+|glutamate-5-semialdehyde-dehydrogenase
MISEVFRKGRDAKEASYALAATSTAAKNQALAAIADGLVAHEDDILAANAVDLKRAREKGMAEAMVDRLTLTKDRIAAMAEGVRQVIDLPDPAGVVLDEWDRPNGLHIRKVSVPLGVIAIIYESRPNVTVDAAVLCVKAGNACVLRGGSEAIASNTALANVIREGLAKAGLPADAVNLIENTDRALVKELLTLRRYIDLAIPRGGAGLIRMVVDTATVPCIETGSGVCHVYVDKDADLDMAVHIVENAKVSRPSTCNAMETLLVHRDVADAFLKKLAPVMEADRVELRGDDEACQSSAMKAASEEDWATEYNALIMSVKVVGSLQEALDHIRRFSTHHSEAIITENKATAAAFQAAVDSAAVYVNASTRFTDGFEFGFGAEIGISTQKLHVRGPMGLEALVSYKYLVDGNGQIR
>CP027570.1|AVO75027.1|1851516_1852158_+|nicotinate-nucleotide-adenylyltransferase
MEITRLGIMGGTFNPIHLGHLMIAEEARQTFHLDKVLFVPSYITPNKNVNGATAEQRLTMTRLATADNPRFTVSDMEMRRKGNSYTVDTLRFLKKLYGPSYILYFISGTDTIHDLHNWKEPEEILKLCQFVGATRPDGSEQIDSIIASFGELGKHILKLPVPTMEISSTELRRRIRLGLSVRYMIPPAVAEYIRKNGVYQCTTKNSKIESKRI
>CP027570.1|AVO75028.1|1852115_1852712_+|HD-domain-containing-protein
MYNEEFKDRIKADLKESLSSHRYTHVLGVAAAARELADRYGCDADTAEVAGLLHDAAKQLPLPDMQALAEKSFPVLPAPILANGGLLHGYAAVTIARERYGITDQALLGAIAHHTTGAEQMSTLEKIIFLADYIEVNRDFDGVDDLRKAARRNLDEAVLLGYDSTIRHLLDQGKPIFVGTVVNRNAQIDVVRAADRKA
>CP027570.1|AVO75029.1|1852714_1853683_+|LytR-family-transcriptional-regulator
MTQEKRRKILYRILTVVAAVAVFLAGRSLYLHYQSIKEAPIQQDAPDTSQTQSDSSVFAQTSPDKPLYVLLLGTDGGHPQQANFVGVAAINKAKKHIDIIMLPDDTKIEGRKEKGIQELQDVYSEGGMSLVRAVVEDIFHIPIPYYATFTADSFSKMVDMSGGVPIYVEKNMYHGDEETGKTDINLFQGYQTLTGKEAAGYMRYVDGDGYLSRTQRQERFIKNFYEDRQDCFGVTNAFFLYRAWHDVDSNISAKDMAQLAFDFRGVTADNIDFYILPGEMAMSGKNGDTKYYWTYDPVEVQKVIGRTNNAISTAPEPDDTKK
>CP027570.1|AVO75030.1|1853713_1854097_+|ribosome-silencing-factor
MPITMKAAKAEQPKELKSYEIACKAADDKKAWDIVTLDMSDSSLMADYFVICSARNNRQSQSIADNIEEQMEKNGYDVRHVEGYREGKWILIDAGEVIAHVFVEQDRQYYDLENLWCDAPRIAYEGE
>CP027570.1|AVO75031.1|1854098_1854953_+|RNA-binding-protein
MTTLQENSIATLEVLRQSDMGVFLNGGTGNTNDDILLHKNQQTGDVNVGDKVTVFLYHDPSGRLTASMRLPKIKVGQIGYAPVINTTRFGAFVDVGTERGIFMPFAEMKGRPKEGEYVWVKLYEDKSHRLAVSMEVEDEMRRASRAATDAKIGDWVEGAVYNMTDQGAYLMTRERWIAFLHRSEFNGPILIGQMIKGRITYLREDGRINISLRQTKENAINPDAERILDFLKQRKGKMPYGDKTAPAVIKAKFGLSKAAFKRALGHLMKEKKIHQDQGWTYLDM
>CP027570.1|AVO75032.1|1855338_1855893_+|hypothetical-protein
MSSYSMENKQQAVSAGSLCYAAVLTALVFVLTFVPKIPIPLGYAHLGDAIIFASVLFSTRRQAALAASVGSALSDFIGGFPLWIIPTLIIKYVMVEAVFYTVRPDKREWKLTSPRVFFGFFLSAAWMVLSYTVSGSLLYGSWAVGIPMVPGLIGEGVVNMIAAYALAACLIKARFRGYGYSLKR
>CP027570.1|AVO75033.1|1855906_1856728_+|pyridoxamine-kinase
MHQKKLALVNDVTGYGRCSIAVALPIVSALKVQGCILPTAILSVHTGFHDYYLDDYTDHMTPYIESWKKNGLTFDGISTGFLGSARQIDIVLDFLHDFKGPQTLAFIDPVMGDDGQLYPSYTQEMCDEMRRLLAYADVVTPNVTEACELLSLPYRSDRDLGEADLLAMAQALAEKGPQGVILTGIHDGPYIGNFIYDHGRTSWVKAKKIGSDRSGTGDVFAAIVSASVVRGESLEQAVQKASDFICRVMAYTETLDLPHNAGLAFEEYLTTLR

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Crispr_ID: CP027570_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027570_9

1937904-1941599

TypeI

I-C

Consensus_repeat	Method
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	PILER-CR
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CRT

54 spacers

cas7,cas8c,cas5,cas3

The CRISPR arrays of CP027570_9

>merge|CP027570|9|1937904-1941599|PILER-CR,CRISPRCasFinder,CRT
GTCGCACCCTTCACGGGTGCGTGGATTGAAATTAAAGTTGTCTTGATTCTTAGTTTATCATGGATAGGGTCGCACCCTTCACGGGTGCGTGGATTGAAATTATACATCAGGAGGCTCTAAATTAAATGAAACGAGCGTCGCACCCTTCACGGGTGCGTGGATTGAAATCTGAATGGGACCTGGAAAAATGCGTCCAGTGTACGTCGCACCCTTCACGGGTGCGTGGATTGAAATAATGAAACCGATGAAACGGTCAACAAGAAGACCAAGTCGCACCCTTCACGGGTGCGTGGATTGAAATGGCATGGACACGCTGACGGCGGACGGACCGGCCAAGCGTCGCACCCTTCACGGGTGCGTGGATTGAAATAATGAAACCGATGAAACGGTCAACAAGAAGACCAAGTCGCACCCTTCACGGGTGCGTGGATTGAAATCCGGCAGAACATCTCCTGACCAACGACGATATGGAGTCGCACCCTTCACGGGTGCGTGGATTGAAATACCTTCCTCAGCAAGGAAGAAATCGACGCCCTGGCGTCGCACCCTTCACGGGTGCGTGGATTGAAATATCGGCTGGATCACGGGCATCGAAGGGGTCTACTTCCGTCGCACCCTTCACGGGTGCGTGGATTGAAATTTATAATTACAACGCAGAGGAGTAAGGTGACCACGTCGCACCCTTCACGGGTGCGTGGATTGAAATCTCATGGCTTGCGACAAGGCCCTCGTTGAACCGTCGTCGCACCCTTCACGGGTGCGTGGATTGAAATTTTGAGCCAGAAAGATTATGCGTCGGGACAAATGGGGTCGCACCCTTCACGGGTGCGTGGATTGAAATGGCTTATGCCTGTGCCCGCGGTGCTGACCGCATGAGCGTCGCACCCTTCACGGGTGCGTGGATTGAAATTGATCAAGGCCGCCGCGATTTGCAGGCCTGGTGGACGTCGCACCCTTCACGGGTGCGTGGATTGAAATATATAGAACATCCTGAAAGAGATACTTTGGTCATCGTCGCACCCTTCACGGGTGCGTGGATTGAAATGTGTATTAGTTAACGGTGCCGATGGCCGCATGGGCAGCGTCGCACCCTTCACGGGTGCGTGGATTGAAATCAGCAGCAGCTGGGCGTCTTGCAGGACCGGCCGGACGTCGCACCCTTCACGGGTGCGTGGATTGAAATCCGGAAGTCGTCTACTGTGCCGGCAAGACCGTCCGTCGCACCCTTCACGGGTGCGTGGATTGAAATATCATCATGGCGACAATCGGCGTCCTCGTCGTCCTCGTCGCACCCTTCACGGGTGCGTGGATTGAAATTCGCCTGCAGACTGAAGGACGGGGCCATCTGCGCCGGTCGCACCCTTCACGGGTGCGTGGATTGAAATTGCATGTGTCCCGGTGGCGTCGTCGTCGGGGCGGCTTGTCGCACCCTTCACGGGTGCGTGGATTGAAATTCGATTTCAATCATACGGGGATGAGCATCGTCGAAAGTCGCACCCTTCACGGGTGCGTGGATTGAAATGCATGATACGCTGGAAACGTATACGGCTGTCAGTGGTCGCACCCTTCACGGGTGCGTGGATTGAAATCAAGACAGGCGTCATCTTCAAGGCCGCTATCGATACGTCGCACCCTTCACGGGTGCGTGGATTGAAATATTTTCCTTGTGGACGGCTTCGGCTGTTTCCTGCGTCGCACCCTTCACGGGTGCGTGGATTGAAATAGTAAAAAAGAAATCCGGTCAAATTTTGTTTACGGGTCGCACCCTTCACGGGTGCGTGGATTGAAATCCGATGCCATCTGCTTCGTCTCGGAAAAGGGGCGGGGTCGCACCCTTCACGGGTGCGTGGATTGAAATTATATACGCGTAAAACGTATAACCAAAGCTATATCAGTCGCACCCTTCACGGGTGCGTGGATTGAAATCCAGAAGGCAGCCGCCGAAGGGAGGTCAGTCCAGTCGCACCCTTCACGGGTGCGTGGATTGAAATCTGTCGATGAATTGATCAAAACGTTGGAAAAGCTGTGTCGCACCCTTCACGGGTGCGTGGATTGAAATGACACGGCGCACGGATACGCCGGCCAGGTACATCTCGTCGCACCCTTCACGGGTGCGTGGATTGAAATTGGCCATCGCTCTGAGCCTGCTGTGCACCGGCCTGGGCGTCGCACCCTTCACGGGTGCGTGGATTGAAATATGCGACACCACAAGACGCCGGCAGTGGCACGGGAAGTCGCACCCTTCACGGGTGCGTGGATTGAAATGGTAATGTCGCAGCGCTGGTCAAGTACGCGCTTGAGTCGCACCCTTCACGGGTGCGTGGATTGAAATTTACAAAGAAGCGCTGAAAGACGCTCGTAAGCAAGTCGCACCCTTCACGGGTGCGTGGATTGAAATGTGGAATAGCTATTACGGTTTCCCCCAGCAGTCGTGGTCGCACCCTTCACGGGTGCGTGGATTGAAATTTGCGTGGCTTGACTACATGGACGAGGACGAAAAACGTCGCACCCTTCACGGGTGCGTGGATTGAAATGGACATACGGAGCCAATATTCGTCCTGGTGATTACTGCGTCGCACCCTTCACGGGTGCGTGGATTGAAATGAACGTCTCCGCAGGCTGAATGACCCGAAACTTACTGTCGCACCCTTCACGGGTGCGTGGATTGAAATCAGCTTAGCATAATGCCAATCGTCCAGCACGTGCTTGTCGCACCCTTCACGGGTGCGTGGATTGAAATAGAACGAAGTGCAAAACCCTGGCCGATTACATTAACGTCGCACCCTTCACGGGTGCGTGGATTGAAATGCTGTATCAACGAAGAACTGGATATCTTCCGCTGTCGTCGCACCCTTCACGGGTGCGTGGATTGAAATAACGCAAACTTCGAAATTAATTGCTTGAAGAAATACGTCGCACCCTTCACGGGTGCGTGGATTGAAATGTTTTTGCAATATACGTCGCTATCCCTCCTCGTCAGTCGCACCCTTCACGGGTGCGTGGATTGAAATGTGAGGTGGCTAGTCAATCCGCTGATTTTCCCGGCGCGTCGCACCCTTCACGGGTGCGTGGATTGAAATGTGGATTCAAAAAGCAACTAATATCGACACTAAGCGTCGCACCCTTCACGGGTGCGTGGATTGAAATACTTACATGGATATGATAAATACATTGATGAAGAAGCGTCGCACCCTTCACGGGTGCGTGGATTGAAATTTTGTAGCTTAAAATTATAGTCAACTAGAATAGAGGCGTCGCACCCTTCACGGGTGCGTGGATTGAAATTTCTATTATTATCTCTTTTATCTCTTTACTCTTATGCGTCGCACCCTTCACGGGTGCGTGGATTGAAATAAGTAGGATGCGGAACCGTTCGTCTGAGATTGTGGAGCGTCGCACCCTTCACGGGTGCGTGGATTGAAATCGCAGCAGGTTATCCGGCTGATTGTATCGCCGTCAGGTCGCACCCTTCACGGGTGCGTGGATTGAAATTTGTATCAAGATGAAAAGAAGGTGGACTAATTATGCGTCGCACCCTTCACGGGTGCGTGGATTGAAATATCGCCCCCATTTTGGATTGTCAGCTCATAAGTCAAAGTCGCACCCTTCACGGGTGCGTGGATTGAAATAATGAAGCTGTCTAAGAGCTGCTGGCCGGCCTTCTGTCGCACCCTTCACGGGTGCGTGGATTGAAAT

>CP027570|9|3|1937904-1941599|PILER-CR
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TAAAGTTGTCTTGATTCTTAGTTTATCATGGATAGG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TATACATCAGGAGGCTCTAAATTAAATGAAACGAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CTGAATGGGACCTGGAAAAATGCGTCCAGTGTAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AATGAAACCGATGAAACGGTCAACAAGAAGACCAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GGCATGGACACGCTGACGGCGGACGGACCGGCCAAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AATGAAACCGATGAAACGGTCAACAAGAAGACCAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CCGGCAGAACATCTCCTGACCAACGACGATATGGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ACCTTCCTCAGCAAGGAAGAAATCGACGCCCTGGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATCGGCTGGATCACGGGCATCGAAGGGGTCTACTTCC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTATAATTACAACGCAGAGGAGTAAGGTGACCAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CTCATGGCTTGCGACAAGGCCCTCGTTGAACCGTC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTTGAGCCAGAAAGATTATGCGTCGGGACAAATGGG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GGCTTATGCCTGTGCCCGCGGTGCTGACCGCATGAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TGATCAAGGCCGCCGCGATTTGCAGGCCTGGTGGAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATATAGAACATCCTGAAAGAGATACTTTGGTCATC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTGTATTAGTTAACGGTGCCGATGGCCGCATGGGCAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CAGCAGCAGCTGGGCGTCTTGCAGGACCGGCCGGAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CCGGAAGTCGTCTACTGTGCCGGCAAGACCGTCC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATCATCATGGCGACAATCGGCGTCCTCGTCGTCCTC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TCGCCTGCAGACTGAAGGACGGGGCCATCTGCGCCG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TGCATGTGTCCCGGTGGCGTCGTCGTCGGGGCGGCTT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TCGATTTCAATCATACGGGGATGAGCATCGTCGAAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GCATGATACGCTGGAAACGTATACGGCTGTCAGTG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CAAGACAGGCGTCATCTTCAAGGCCGCTATCGATAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATTTTCCTTGTGGACGGCTTCGGCTGTTTCCTGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AGTAAAAAAGAAATCCGGTCAAATTTTGTTTACGG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CCGATGCCATCTGCTTCGTCTCGGAAAAGGGGCGGG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TATATACGCGTAAAACGTATAACCAAAGCTATATCA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CCAGAAGGCAGCCGCCGAAGGGAGGTCAGTCCA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CTGTCGATGAATTGATCAAAACGTTGGAAAAGCTGT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GACACGGCGCACGGATACGCCGGCCAGGTACATCTC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TGGCCATCGCTCTGAGCCTGCTGTGCACCGGCCTGGGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATGCGACACCACAAGACGCCGGCAGTGGCACGGGAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GGTAATGTCGCAGCGCTGGTCAAGTACGCGCTTGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTACAAAGAAGCGCTGAAAGACGCTCGTAAGCAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTGGAATAGCTATTACGGTTTCCCCCAGCAGTCGTG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTGCGTGGCTTGACTACATGGACGAGGACGAAAAAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GGACATACGGAGCCAATATTCGTCCTGGTGATTACTGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GAACGTCTCCGCAGGCTGAATGACCCGAAACTTACT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CAGCTTAGCATAATGCCAATCGTCCAGCACGTGCTT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AGAACGAAGTGCAAAACCCTGGCCGATTACATTAAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GCTGTATCAACGAAGAACTGGATATCTTCCGCTGTC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AACGCAAACTTCGAAATTAATTGCTTGAAGAAATAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTTTTTGCAATATACGTCGCTATCCCTCCTCGTCA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTGAGGTGGCTAGTCAATCCGCTGATTTTCCCGGCGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTGGATTCAAAAAGCAACTAATATCGACACTAAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ACTTACATGGATATGATAAATACATTGATGAAGAAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTTGTAGCTTAAAATTATAGTCAACTAGAATAGAGGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTCTATTATTATCTCTTTTATCTCTTTACTCTTATGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AAGTAGGATGCGGAACCGTTCGTCTGAGATTGTGGAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CGCAGCAGGTTATCCGGCTGATTGTATCGCCGTCAG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTGTATCAAGATGAAAAGAAGGTGGACTAATTATGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATCGCCCCCATTTTGGATTGTCAGCTCATAAGTCAAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AATGAAGCTGTCTAAGAGCTGCTGGCCGGCCTTCT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT

>CP027570|9|9|1937904-1941599|CRISPRCasFinder
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TAAAGTTGTCTTGATTCTTAGTTTATCATGGATAGG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TATACATCAGGAGGCTCTAAATTAAATGAAACGAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CTGAATGGGACCTGGAAAAATGCGTCCAGTGTAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AATGAAACCGATGAAACGGTCAACAAGAAGACCAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GGCATGGACACGCTGACGGCGGACGGACCGGCCAAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AATGAAACCGATGAAACGGTCAACAAGAAGACCAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CCGGCAGAACATCTCCTGACCAACGACGATATGGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ACCTTCCTCAGCAAGGAAGAAATCGACGCCCTGGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATCGGCTGGATCACGGGCATCGAAGGGGTCTACTTCC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTATAATTACAACGCAGAGGAGTAAGGTGACCAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CTCATGGCTTGCGACAAGGCCCTCGTTGAACCGTC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTTGAGCCAGAAAGATTATGCGTCGGGACAAATGGG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GGCTTATGCCTGTGCCCGCGGTGCTGACCGCATGAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TGATCAAGGCCGCCGCGATTTGCAGGCCTGGTGGAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATATAGAACATCCTGAAAGAGATACTTTGGTCATC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTGTATTAGTTAACGGTGCCGATGGCCGCATGGGCAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CAGCAGCAGCTGGGCGTCTTGCAGGACCGGCCGGAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CCGGAAGTCGTCTACTGTGCCGGCAAGACCGTCC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATCATCATGGCGACAATCGGCGTCCTCGTCGTCCTC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TCGCCTGCAGACTGAAGGACGGGGCCATCTGCGCCG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TGCATGTGTCCCGGTGGCGTCGTCGTCGGGGCGGCTT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TCGATTTCAATCATACGGGGATGAGCATCGTCGAAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GCATGATACGCTGGAAACGTATACGGCTGTCAGTG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CAAGACAGGCGTCATCTTCAAGGCCGCTATCGATAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATTTTCCTTGTGGACGGCTTCGGCTGTTTCCTGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AGTAAAAAAGAAATCCGGTCAAATTTTGTTTACGG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CCGATGCCATCTGCTTCGTCTCGGAAAAGGGGCGGG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TATATACGCGTAAAACGTATAACCAAAGCTATATCA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CCAGAAGGCAGCCGCCGAAGGGAGGTCAGTCCA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CTGTCGATGAATTGATCAAAACGTTGGAAAAGCTGT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GACACGGCGCACGGATACGCCGGCCAGGTACATCTC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TGGCCATCGCTCTGAGCCTGCTGTGCACCGGCCTGGGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATGCGACACCACAAGACGCCGGCAGTGGCACGGGAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GGTAATGTCGCAGCGCTGGTCAAGTACGCGCTTGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTACAAAGAAGCGCTGAAAGACGCTCGTAAGCAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTGGAATAGCTATTACGGTTTCCCCCAGCAGTCGTG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTGCGTGGCTTGACTACATGGACGAGGACGAAAAAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GGACATACGGAGCCAATATTCGTCCTGGTGATTACTGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GAACGTCTCCGCAGGCTGAATGACCCGAAACTTACT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CAGCTTAGCATAATGCCAATCGTCCAGCACGTGCTT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AGAACGAAGTGCAAAACCCTGGCCGATTACATTAAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GCTGTATCAACGAAGAACTGGATATCTTCCGCTGTC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AACGCAAACTTCGAAATTAATTGCTTGAAGAAATAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTTTTTGCAATATACGTCGCTATCCCTCCTCGTCA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTGAGGTGGCTAGTCAATCCGCTGATTTTCCCGGCGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTGGATTCAAAAAGCAACTAATATCGACACTAAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ACTTACATGGATATGATAAATACATTGATGAAGAAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTTGTAGCTTAAAATTATAGTCAACTAGAATAGAGGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTCTATTATTATCTCTTTTATCTCTTTACTCTTATGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AAGTAGGATGCGGAACCGTTCGTCTGAGATTGTGGAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CGCAGCAGGTTATCCGGCTGATTGTATCGCCGTCAG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTGTATCAAGATGAAAAGAAGGTGGACTAATTATGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATCGCCCCCATTTTGGATTGTCAGCTCATAAGTCAAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AATGAAGCTGTCTAAGAGCTGCTGGCCGGCCTTCT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT

>CP027570|9|3|1937904-1941599|CRT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TAAAGTTGTCTTGATTCTTAGTTTATCATGGATAGG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TATACATCAGGAGGCTCTAAATTAAATGAAACGAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CTGAATGGGACCTGGAAAAATGCGTCCAGTGTAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AATGAAACCGATGAAACGGTCAACAAGAAGACCAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GGCATGGACACGCTGACGGCGGACGGACCGGCCAAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AATGAAACCGATGAAACGGTCAACAAGAAGACCAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CCGGCAGAACATCTCCTGACCAACGACGATATGGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ACCTTCCTCAGCAAGGAAGAAATCGACGCCCTGGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATCGGCTGGATCACGGGCATCGAAGGGGTCTACTTCC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTATAATTACAACGCAGAGGAGTAAGGTGACCAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CTCATGGCTTGCGACAAGGCCCTCGTTGAACCGTC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTTGAGCCAGAAAGATTATGCGTCGGGACAAATGGG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GGCTTATGCCTGTGCCCGCGGTGCTGACCGCATGAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TGATCAAGGCCGCCGCGATTTGCAGGCCTGGTGGAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATATAGAACATCCTGAAAGAGATACTTTGGTCATC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTGTATTAGTTAACGGTGCCGATGGCCGCATGGGCAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CAGCAGCAGCTGGGCGTCTTGCAGGACCGGCCGGAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CCGGAAGTCGTCTACTGTGCCGGCAAGACCGTCC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATCATCATGGCGACAATCGGCGTCCTCGTCGTCCTC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TCGCCTGCAGACTGAAGGACGGGGCCATCTGCGCCG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TGCATGTGTCCCGGTGGCGTCGTCGTCGGGGCGGCTT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TCGATTTCAATCATACGGGGATGAGCATCGTCGAAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GCATGATACGCTGGAAACGTATACGGCTGTCAGTG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CAAGACAGGCGTCATCTTCAAGGCCGCTATCGATAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATTTTCCTTGTGGACGGCTTCGGCTGTTTCCTGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AGTAAAAAAGAAATCCGGTCAAATTTTGTTTACGG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CCGATGCCATCTGCTTCGTCTCGGAAAAGGGGCGGG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TATATACGCGTAAAACGTATAACCAAAGCTATATCA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CCAGAAGGCAGCCGCCGAAGGGAGGTCAGTCCA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CTGTCGATGAATTGATCAAAACGTTGGAAAAGCTGT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GACACGGCGCACGGATACGCCGGCCAGGTACATCTC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TGGCCATCGCTCTGAGCCTGCTGTGCACCGGCCTGGGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATGCGACACCACAAGACGCCGGCAGTGGCACGGGAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GGTAATGTCGCAGCGCTGGTCAAGTACGCGCTTGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTACAAAGAAGCGCTGAAAGACGCTCGTAAGCAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTGGAATAGCTATTACGGTTTCCCCCAGCAGTCGTG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTGCGTGGCTTGACTACATGGACGAGGACGAAAAAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GGACATACGGAGCCAATATTCGTCCTGGTGATTACTGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GAACGTCTCCGCAGGCTGAATGACCCGAAACTTACT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CAGCTTAGCATAATGCCAATCGTCCAGCACGTGCTT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AGAACGAAGTGCAAAACCCTGGCCGATTACATTAAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GCTGTATCAACGAAGAACTGGATATCTTCCGCTGTC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AACGCAAACTTCGAAATTAATTGCTTGAAGAAATAC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTTTTTGCAATATACGTCGCTATCCCTCCTCGTCA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTGAGGTGGCTAGTCAATCCGCTGATTTTCCCGGCGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTGGATTCAAAAAGCAACTAATATCGACACTAAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ACTTACATGGATATGATAAATACATTGATGAAGAAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTTGTAGCTTAAAATTATAGTCAACTAGAATAGAGGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTCTATTATTATCTCTTTTATCTCTTTACTCTTATGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AAGTAGGATGCGGAACCGTTCGTCTGAGATTGTGGAGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CGCAGCAGGTTATCCGGCTGATTGTATCGCCGTCAG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTGTATCAAGATGAAAAGAAGGTGGACTAATTATGC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ATCGCCCCCATTTTGGATTGTCAGCTCATAAGTCAAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AATGAAGCTGTCTAAGAGCTGCTGGCCGGCCTTCT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP027570.1\|AVO75104.1\|1946302_1947589_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|379646
CP027570.1\|AVO75096.1\|1932074_1934267_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
CP027570.1\|AVO75103.1\|1945135_1946137_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
CP027570.1\|AVO75097.1\|1934284_1934938_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
CP027570.1\|AVO75109.1\|1951597_1952053_-\|nucleoside-deaminase	unknown	unknown	gnl\|CDD\|223663
CP027570.1\|AVO75098.1\|1934934_1936824_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
CP027570.1\|AVO75102.1\|1944339_1945122_+\|electron-transfer-flavoprotein-beta-subunit/FixA-family-protein	unknown	unknown	gnl\|CDD\|238847
CP027570.1\|AVO75106.1\|1948158_1949142_+\|peptidase-S58-family-protein	unknown	unknown	gnl\|CDD\|239070
CP027570.1\|AVO75105.1\|1947616_1948144_+\|dCTP-deaminase	unknown	unknown	gnl\|CDD\|234753
CP027570.1\|AVO75092.1\|1927108_1927711_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|225116
CP027570.1\|AVO75108.1\|1950375_1951248_+\|UTP--glucose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|224131
CP027570.1\|AVO75090.1\|1925684_1926758_+\|5-methylcytosine-specific-restriction-system-specificity-protein-McrC	unknown	unknown	gnl\|CDD\|236618
CP027570.1\|AVO75091.1\|1926825_1927011_+\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO75101.1\|1942796_1944179_+\|ATP--cob(I)alamin-adenosyltransferase	unknown	unknown	gnl\|CDD\|224586
CP027570.1\|AVO75100.1\|1941872_1942646_-\|PhzF-family-phenazine-biosynthesis-protein	unknown	unknown	gnl\|CDD\|223461
CP027570.1\|AVO75095.1\|1931151_1931955_+\|sel1-repeat-family-protein	unknown	unknown	gnl\|CDD\|276807
CP027570.1\|AVO75099.1\|1936825_1937719_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
CP027570.1\|AVO75093.1\|1927741_1928245_-\|S-adenosylmethionine-decarboxylase-proenzyme	unknown	unknown	gnl\|CDD\|376892
CP027570.1\|AVO75107.1\|1949279_1950395_+\|UDP-galactopyranose-mutase	unknown	unknown	gnl\|CDD\|223636
CP027570.1\|AVO75094.1\|1928380_1930969_-\|ATP-dependent-chaperone-ClpB	unknown	unknown	gnl\|CDD\|274529

Protein	Function_ID	Function_description	E-value
CP027570.1\|AVO75104.1\|1946302_1947589_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|379646	pfam14559, TPR_19, Tetratricopeptide repeat.	0.00528061
CP027570.1\|AVO75096.1\|1932074_1934267_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	4.24422e-56
CP027570.1\|AVO75103.1\|1945135_1946137_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	8.47344e-103
CP027570.1\|AVO75101.1\|1942796_1944179_+\|ATP--cob(I)alamin-adenosyltransferase	gnl\|CDD\|224586	COG1672, COG1672, Predicted ATPase (AAA+ superfamily) [General function prediction only].	1.14974e-17
CP027570.1\|AVO75109.1\|1951597_1952053_-\|nucleoside-deaminase	gnl\|CDD\|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	1.17079e-60
CP027570.1\|AVO75098.1\|1934934_1936824_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
CP027570.1\|AVO75102.1\|1944339_1945122_+\|electron-transfer-flavoprotein-beta-subunit/FixA-family-protein	gnl\|CDD\|238847	cd01714, ETF_beta, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.	4.37077e-70
CP027570.1\|AVO75106.1\|1948158_1949142_+\|peptidase-S58-family-protein	gnl\|CDD\|239070	cd02252, nylC_like, nylC-like family; composed of proteins with similarity to Flavobacterium endo-type 6-aminohexanoate-oligomer hydrolase (EIII), the product of the nylon oligomer degradation gene, nylC. EIII is an amide hydrolase that catalyzes the degradation of highly-polymerized 6-aminohexanoate oligomers. Together with other nylon degradation enzymes, such as 6-aminohexanoate cyclic dimer hydrolase (EI) and 6-aminohexanoate dimer hydrolase (EII), EIII plays a role in the detoxification and biological removal of the synthetic by-products of nylon manufacture. EIII shows sequence similarity to L-aminopeptidase D-amidase/D-esterase (DmpA), an aminopeptidase that releases N-terminal D and L amino acids from peptide substrates. Like DmpA, EIII undergoes autocatalytic cleavage in front of a nucleophile to form a heterodimer. DmpA shows similarity in catalytic mechanism to N-terminal nucleophile (Ntn) hydrolases, which are enzymes that catalyze the cleavage of amide bonds through the nucleophilic attack of the side chain of an N-terminal serine, threonine, or cysteine.	5.00781e-88
CP027570.1\|AVO75105.1\|1947616_1948144_+\|dCTP-deaminase	gnl\|CDD\|234753	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed.	3.1033e-65
CP027570.1\|AVO75092.1\|1927108_1927711_-\|HD-domain-containing-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	2.43279e-42
CP027570.1\|AVO75108.1\|1950375_1951248_+\|UTP--glucose-1-phosphate-uridylyltransferase	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	2.67789e-165
CP027570.1\|AVO75090.1\|1925684_1926758_+\|5-methylcytosine-specific-restriction-system-specificity-protein-McrC	gnl\|CDD\|236618	PRK09736, PRK09736, 5-methylcytosine-specific restriction enzyme subunit McrC; Provisional.	1.43113e-130
CP027570.1\|AVO75097.1\|1934284_1934938_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	7.23913e-97
CP027570.1\|AVO75100.1\|1941872_1942646_-\|PhzF-family-phenazine-biosynthesis-protein	gnl\|CDD\|223461	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only].	1.15461e-64
CP027570.1\|AVO75095.1\|1931151_1931955_+\|sel1-repeat-family-protein	gnl\|CDD\|276807	sd00010, SLR, Sel1-like repeat. Sel1-like repeats (SLRs) share similar alpha-helical conformations with Tetratricopeptide repeats (TPRs), but with different consensus sequence lengths and superhelical topologies. SLRs contain 36 to 44 amino acids and are present in bacteria and eukaryotes but not in archaea. SLR proteins are involved in a variety of functions, and many serve as adaptor proteins for the assembly of macromolecular complexes. The SLR family was named after the Caenorhabditis elegans Sel1 protein which is predicted to fold into 11 SLRs, a transmembrane domain, and an N-terminal signal sequence. The human Sel1L protein contains an additional fibronectin type-II domain and an N-terminal PEST sequence. Its downregulation is associated with the development of breast and pancreatic carcinomas.	1.03872e-36
CP027570.1\|AVO75099.1\|1936825_1937719_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	4.48194e-145
CP027570.1\|AVO75093.1\|1927741_1928245_-\|S-adenosylmethionine-decarboxylase-proenzyme	gnl\|CDD\|376892	pfam02675, AdoMet_dc, S-adenosylmethionine decarboxylase. This family contains several S-adenosylmethionine decarboxylase proteins from bacterial and archaebacterial species. S-adenosylmethionine decarboxylase (AdoMetDC), a key enzyme in the biosynthesis of spermidine and spermine, is first synthesized as a proenzyme, which is cleaved post translationally to form alpha and beta subunits. The alpha subunit contains a covalently bound pyruvoyl group derived from serine that is essential for activity.	6.13109e-19
CP027570.1\|AVO75107.1\|1949279_1950395_+\|UDP-galactopyranose-mutase	gnl\|CDD\|223636	COG0562, Glf, UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane].	5.17128e-167
CP027570.1\|AVO75094.1\|1928380_1930969_-\|ATP-dependent-chaperone-ClpB	gnl\|CDD\|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0

>CP027570.1|AVO75099.1|1936825_1937719_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSEPIKNRYEFTILFDVENGNPNGDPDAGNMPRVDPETGYGLVTDVCLKRKIRNCIETICEDQPGYRIYVKEGVPLQRSDKEALTYVGIDEKTDIKKMKKDDPELDRKICDFMCQNFFDIRTFGAVMTTFVKSALNCGQVRGPVQLGFARSIDPIVPQEVTITRVAITTEKDAENKNTEIGRKYIIPYALYRVDGYVSANLARKVTGFSEDDLQYLWKAIINMFEYDHSAARGNMAVRELIVFKHDSELGNAPAYKLFDTVHVQKKEGVVAPRNYTDYDVTVDESKIPEHVTCTRMI
>CP027570.1|AVO75098.1|1934934_1936824_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILQSLVAYYETLARQGAIAKPGWGDYKISYAVNLNQQGEVIGILSLEKEVMRGKKTVSVPTVHMLPEGVKKSSGIRPQFLWANAAYCLGLPKDMKTADMAEDAAAKWEKEKKRSIACFEAMKKYHLDILEAVHTPSAEALKRFFTTWKPETAENHPVLKPYLATNLLTANVMYAVEGVFVKDDETIRAAWDAHYNQPSADAVEGQCLVTGKIAPIARIHPNIKGVRGAQSSGASLVSFNADAFESYGHSGGQCYNAPVSEHAAFAYTTALNQLIADEKHCKVIGNTTVVYWAADGEEAYQDLLHSAVFEDDDTIDDETLDALFSHIQKGMPFDFQGVPIHPDTPFYILGLSPNAARLSVRFFLQDTFGHFIDHVRKHYERLEIVMPQQYRAYLPLGRLLGVTVNPKRKDTKGKPDKKYEKASPLLAGAVMRSILSDTPYPQALYNSVMLRVKADQDDKDNYIYKISAEKAAIIKACLLKNFPKGEEVTVALNEESTNTAYVLGRLFSVLEQIQEKAHEKDNGRGKVPDSEKNRKGINSTIKDRFFNSAAATPGWVFPILLKMANHHLRKLNDRKGLKIELEKMVTELEGKIEMNGQPIPARMNLNDQGLFILGYYHQTQKRYMKKEEK
>CP027570.1|AVO75097.1|1934284_1934938_+|type-I-C-CRISPR-associated-protein-Cas5
MAIRVEVWGDYALFSRPEMKTERVSYDVMTPSAARGIIEAIYWHPGLKWIIDKIYVLSPIRFTNIRRNEVKAKASARAAKQAMTKKNVDLYLSTKEEIQQRASMVLCKVHYVIEAHFELTDKANASDNAGKFQDIIRRRLKRGQCYHTPYFGCREFPVNFREYEFDSVPTAYAGEDKELGYMLYDMDYSDLQHIRPMFFKATLHNGVLDLRDCEVHS
>CP027570.1|AVO75096.1|1932074_1934267_+|CRISPR-associated-helicase/endonuclease-Cas3
MKMGNYIGHTSEDGRQQLLIDHLKGTSLLAERFASVFDAPEWGRMAGLYHDIGKYSAAFQRRILEDGPLVDHSTAGALLMKKVKNVPLAFCIASHHSGLLNTGTKLSKVDDGTLMGRLKKELKGKLDYSAYRQELPEPVPIRKAPAFLYGKDQFYYSFFIRMLFSCLVDADFLDTERFVNDGKVQRGGFATMEELHDLFFAYYATFGKPTTPINQKRQEIYQQCLDAAEKEPGMFSLTVPTGGGKTLSSLAFALKHAIKYKKQRIIYIIPYTSIIEQTADIFRNILGDGNVIEHHMNVDYDKDYDKNYDDDKKEDDGLNRKKLATENWDAPVIVTTNVQFFESLFAAKTSRCRKVHNIANSVLIFDEAQMLPEPYLRPCIRSMGELVANYRCTAVLCTATQPSLETYFSRIGEDLKVREICPDTQDLYGFFRRVTYRFMDVDSLESLAAQLKEHEQVLCVTNSKKDARDLYQMMAGDGCYHLSTFMYPAHRRRVLAIIRQRLQEGLPCRVISTSLIQAGVDVDFPVVYREIAGLDSIIQTGGRCNREGKQRTEDSIVSIYDLPKPMNRIPAFVRRPIEITQMVAKDHADIASAESIKAYFDQLHYTLGEDQLDSKDVLKRLEVNKPAFTEIAKDFKLIEEDSRTVFIPIDDDLDNQKILAQLRSGVCNRSILRKANQYMVGVYENQFRKLEETNKLEALEFGLYVLTDPAAYDPDTGLVVNMEDGIGIFL
>CP027570.1|AVO75095.1|1931151_1931955_+|sel1-repeat-family-protein
MDEKERKAFEGDAFAQCAMGDDYFFEAFDADIEYKDVLYKKALYWYHRAAQKGHAASQYNLAYQYEHGLGTDTDMEQAVYWYRRAANQGYGTAENNLGHLYETGNGLPQDYGLALHWYGRAARHDDADGQCNTAIMYQFGYAGPRDYDKAAYWYAQAAKKGNAIAQNNLGYLYETGRGVPQDWELAARWYYEAAMAGDGPAQNNLGVLYRDGHGVRHDLCQAVYWFAQSAASGYKEGMKNYAHALEKGEGVEKDTVEAAYWRQKGKK
>CP027570.1|AVO75094.1|1928380_1930969_-|ATP-dependent-chaperone-ClpB
MGNEKYTQKVIEAFQSAQQIAALHYNQELSSVHMLMGLTKEPEGLLNTIFSECHTDVPMLQARLEQLLKKIPSVKGSSQLSMSTEMVRVIGKAQQLADSMHDEYISTEHILMGIVSESDDEVQQLCREFGLTQDKIMSTIKANRKANVNSDNPEENYKALEKYGRDLTAAARQNKLDPVIGRDDEIRRTIEILSRRRKNNPVLIGEPGVGKTAIVEGLARRIVSGDVPESLKNKTLYSLDMGSLIAGAKYRGEFEERLKSVLNEIAKSDGQILLFIDEIHTVVGAGASEGSMDAGNILKPMLARGDLRCIGATTLNEYQKYIEKDAALERRFQPVMVDQPSVEDTITILRGLKERYEVHHGVRIRDKALVAAAVLSDRYISDRFLPDKAIDLVDEAAAKLRTEIESMPTPIDELRHKIMQLEIEEQSLNKETDDASKERLAKITETKNELKEKESKLKAQWDKEKQSILRTQGLKKEIDAVKSDMAQAERNYDLAKASELKYGKLPELQKQLKEQEAYLAEHQDSQLLKEEVGEEDIAQVVSRWTGIPVTKMMTGEREKLLHLDETLHKRVVGQDDAVRVVSDAIIRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAEALFDDERNIIRIDMSEYMEKHTVSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILLDEIEKAHPDIFNVLLQILDDGRLTDGKGRVVNFKNTIIIMTSNLGSHEILESKDYDEANAKVRELLKQYFRPEFLNRVDDIVVFKALQKDQVRNIAAILLERLGKRLEKQVKIHLTWTDEALQELADKGFDPQFGARPLRRLITHTVETALSRDIIAGTIREGDTVTIGYDGNNFTFTPMRVHAA
>CP027570.1|AVO75093.1|1927741_1928245_-|S-adenosylmethionine-decarboxylase-proenzyme
MNNTLGKHVLIDFYNCKATFTEAEDLQPLVERAFDLVDTPVEGITFFHIDDELTCIAVSGNAHICIHAYPTLSYVAVDIYSFNIDLKTSQIMSALKVNLRSDRIKATSIRRGDFGSIRDMRPKRKSKITTARRMKNTGARIKKTSVKMFNILRHPQKVRRSHRTTNK
>CP027570.1|AVO75092.1|1927108_1927711_-|HD-domain-containing-protein
MYMVSLKQAAGIAREEMTSLDAITAELLNFIQLKSQRLYMHSLQVANYSVSVAAKLTLPKSEIEQVKYAALLHDVGLLFVSNTLLAKMPYLNRSEKAQYKRHAAGGGNMLENIPCCQDIVPYIRYHHEHWDGSGFPKHLRGANIPLGARIIAVADYYDMIINPSAEFWAKTKKQAVRELFSASGLLFDPEVVKAFIETLG
>CP027570.1|AVO75091.1|1926825_1927011_+|hypothetical-protein
MNKSKILFVVWIIGVILLLLGMKYDMRNIFSLITGMIIGGGAVTFLYFKACHEKTTVWIKV
>CP027570.1|AVO75090.1|1925684_1926758_+|5-methylcytosine-specific-restriction-system-specificity-protein-McrC
MSKYKRIFIKNIYYMLSYAFTTLKQSVYENIEKEPFDNIYNLFAAILAKGIGLHLKQGLYREYINCVEDLTVVRGKIDMPGTIRNRLQARLAVTCDYDELSENNLLNQILKSTVLLILRQKDVDEKYKAELKKEMLYFSEVDEIELSQIRWSEIRLQRNNRTYQLLLAICQLLVESSLMTTENGDYHLASFIDEQRMSRLYEKFILEYYAQEFGQRIKGFSSKARQIPWQLDDGNDALLPIMQTDITLTYGIQTLIIDAKYYQRTLQTNFNVRTIHSGNLYQIFTYVKNKEAELKGTEHRVSGMLLYAKTDENLVPDNVYQMSGNQISVKTLDLNQDFSEISRQLNQIVADHFGVNI
>CP027570.1|AVO75100.1|1941872_1942646_-|PhzF-family-phenazine-biosynthesis-protein
MKCYIVDAFTKEIFKGNPAAVCVLDHWLPDELMQHIAMENSLSETAFTVKEGNHWHLRWFTPGGEIDLCGHATLGTAYVLSHFFEPDASRYVFQTLSGELIVTRDGDRFSMDFPAYDMKPVPVTDAMEEALGVRPVEAYLARDLVCVLADEGEVIHCQPDMAKIKQLDGLLCNITAKGSKYDTVSRSFAPKLAVPEDPVCGSGHCHIIPVMAAKLDKTDLVAYQASKRGGELYCHIEKGRIALAGYAALYAESDLKI
>CP027570.1|AVO75101.1|1942796_1944179_+|ATP--cob(I)alamin-adenosyltransferase
MFIGRKMELTRLQQMYDSPRQEVILIYGRRRIGKSELIKQFLQAPEVTGLYYQCKQTTEMNNVQSLSALISDVYQYPPLAFSGIEKLLEFLFQRACQEKQVLVLDEYPYLRQTVAGLDSILQSLIDTYRERSQLKLILCGSFVDTMKSLMLEENPLYGRITLGLHVHPMDYFESAQFYPDFSLEDKVRLYSVFGGVPYYNSLIDPARSVRENVLALLVEPGARLENEVQMYLLGELSKFINANEAFEALARGVHRYKDILSQSHISSSPALSEILKRLILMELVEKEVPINDVHNKKRASYHICDNLASFYYRYIFPYSSQRQIMAPDVFFDRYIADDFARVFVPKRFESLCRQFLIRQNRQGRLPEIFDAIGTYSYDLPKEHKNGEFDVVTHDDKGYIFYEAKFRQTPITDAMIETEIRQVRQIGMDCYRYGFFSRAGYEVTPRPDVILYTLDDLFESC
>CP027570.1|AVO75102.1|1944339_1945122_+|electron-transfer-flavoprotein-beta-subunit/FixA-family-protein
MNIVVLVKQVPAISDIEIAKDNNLVRVGAPSMLNPVDKHAIEAAVAVKEAVGGTVTLLTMGNALAGEMMRDGIAVGADKGVLVSDERMAGSDTLATGLVLAKAIEKLGGADLVFTGKRSTDGDTGQIPPAIAQRLGMALISYANSVSVEGTTITATRLNHDGIETVQAQVPAVVSVTEKSNTPRSPKIRGKMAAKKAVFDVWKVEDLGLDAASVGTSGSATKVTELFAPEPNPVGVMIEGATPADAAANLVKDLTAKNLL
>CP027570.1|AVO75103.1|1945135_1946137_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MELKQNICVYIEIAGGALSPLSIELLGKARQLADAKGKKVVAFVAGADTAKASQEAISYGADAVAAVEDGALAAYDSVLYTKAIAALAEKYEPSVILIGGSPDGRDLGGRLSAQLGVGLVADCTDVRFEGDDDTLTWIRPAYTGKLFVKIQTTTRPQLATISDKIFHGTPADPSRTGEIVKESVDFTGVAPSVTVTGFEPVEKEAEELTITTADIVVGAGRGVQTEDGMKAVQAFAQRIGAAFGVSKPLVDKEWAPYEWQIGITGKKIAPKIYIALGISGAIQHKLGIQDAGLIIAVNKDPDAPIFKFAHYGIVGDLFEVMPELEKQIKKIRG
>CP027570.1|AVO75104.1|1946302_1947589_+|tetratricopeptide-repeat-protein
MDSFAARRACRDGRYDEVLAMYGKAAPDGSWTCWDYYYYAYALRKTKQYRKGREIARAGMIAFPDFTNLHGIYCWCLYYLYIQKFDERTHSPADFRRAVDAILKYSRQEAYSPYALAVWRMVDVLKNKPGQANLMGAYLRRLDPDQLPDQEKTVTLKGRERVIASDRERWYSLMSRILVKEEKYDDCITLCQQALNYFPQLHHDNDIWFSYRIALCQLRQGQVAEGRQRLENLLKYKQHWILYRGLFFASQAEGDSAAMRRYGASAFLAGGEFKGKVNFLVQFAQALENMGGYEKMAYYHYLLARDVRQDQHWKVKAELIAKVDSYAFPEPNRRDLMDGLHQFWMAGKHAGQTCHKGRIERILPGGKAGFLKDREGSQYYFRTSSLYRVRPQEGERVTFYVEDFFETGKEKPAHRAVDIEPVLLYHKS
>CP027570.1|AVO75105.1|1947616_1948144_+|dCTP-deaminase
MILSGKEIVKHLGKEIIIEPFHPERVNPNSYNLSLHNELMVYDHNELDMAKPNPASTIYIPKSGYVLQPNKLYLGRTNEYTRTDGYIPMLEGRSSVGRLGVFIHVTAGFGDVGFAGYWTLEIFCVQPIRIYPNVEICQIYYHDIDGEYDTYKHGKYQNNTGIQPSMLWKDFEKMK
>CP027570.1|AVO75106.1|1948158_1949142_+|peptidase-S58-family-protein
MKEIDMLAMARTNGFRLGNAQDRQGGTGCTVLVFPDSAPCAVDVRGGGPASRESELLSPMAAASGIHAILLSGGSAFGLNASTGVMQYLEEQHIGFDTRICKVPLVVESCIYDLGCGDNVRPDAAMGYAACQAAETGDFREGCYGAGTGATVGKLCGPDYMMKSGLGAYAVQVGDLQVGAVVSVNAVGDVLDEQGQILAGMRSRDGQGFADTRRVMLEEAGQTPTLFSQRAVGTTTNTTIGAVVTNGRFDKAQLKKIAALGSNGIVRAIRPVNTTADGDSLYAASVGSISAELSLTGTIAAYVVEKAIRRAVCQAESLYGIEACQDV
>CP027570.1|AVO75107.1|1949279_1950395_+|UDP-galactopyranose-mutase
MYDYVIVGSGLFGCVFAHEMHKAGRQCLVLERRDQVGGNVYCEEKDGIHIHRYGAHIFHTSDLRVWEYVNQFAKFNHFINTPVANYKGELYNLPFNMNTFAKMWGIITPEQAAAKIEGQRRAAGITEPENLEEQAISLIGTDVYAKLIKGYTEKQWGRSCKELPAFIIKRLPVRYTFDNNYFDDEYQGIPKGGYNVLIDALLDGVEVRTGVDYNRERASYLDVARKVVYTGPIDEYFGYRLGHLAYRGLHFETERYNEVNHQGVAVMNYTDRETPYTRTIEHKHFEFGRQPVTYVTKEYPAEWQAGQEAYYPVNDEANQELYRKYAALARHEYNVIFGGRLAEYKYYDMDDVIASALAAVEREGYHAETNS
>CP027570.1|AVO75108.1|1950375_1951248_+|UTP--glucose-1-phosphate-uridylyltransferase
MQKQIRKAVIPAAGYGTRFLPVTKAIPKEMIPIVDKPVIQYIVEEALQSGIEEILIITGHGKRAIEDHFDTNIDLELQLRQQGKDQLLHLVQDISSINVHYIRQKHMRGLGDAIRCAESFIDNEPFAVLLGDDVIYNPEKPALKQMMEAFSRLGATMLGCQEVPQELVSRYGIVQGQPTDDDRVVKLIDMIEKPAVDEAPSRLAALGRYILTPDIFEILRRVQPGKGGEIQLTDALRLMADREAVYAYTFSGRSYDTGNKLGFLKATVEYALRREDLGDAFREYLRTSLP
>CP027570.1|AVO75109.1|1951597_1952053_-|nucleoside-deaminase
MTKDEFYMGKALAEAKTAYAVGEIPIGAVIVYEKKVVARAYNLRESLPCATAHAELLAIEKACRALNRWRLTGCTLYVTVEPCPMCAGAIVNSRLDRVVYGCDDPKAGAVRSLFHLVDNDCLNHRTEVTAGVRAEECAALMKDFFRQRRKK

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Crispr_ID: CP027570_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027570_10

1999026-1999113

Orphan

Consensus_repeat	Method
CGGCATCTTCTGCTAGCACATCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027570_10

>merge|CP027570|10|1999026-1999113|CRISPRCasFinder
CGGCATCTTCTGCTAGCACATCGGCCACAAATGCTAAAGCGGCCATGAACACTGCTAATACAGCGGCATCTTCTGCAAGCACATCGGC

>CP027570|10|10|1999026-1999113|CRISPRCasFinder
CGGCATCTTCTGCTAGCACATCGGC	CACAAATGCTAAAGCGGCCATGAACACTGCTAATACAG
CGGCATCTTCTGCAAGCACATCGGC

Protein	Signature genes	Signature genes Name	Protein_function
CP027570.1\|AVO75166.1\|2004069_2005053_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366654
CP027570.1\|AVO75162.1\|2000798_2002244_+\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO75151.1\|1990792_1991332_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274317
CP027570.1\|AVO75152.1\|1991192_1991576_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|365862
CP027570.1\|AVO75165.1\|2003295_2004060_+\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO75163.1\|2002236_2002608_+\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO75150.1\|1990334_1990787_+\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO75169.1\|2014547_2014919_+\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO75167.1\|2005049_2006423_+\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO75154.1\|1992466_1994200_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|181342
CP027570.1\|AVO75171.1\|2015767_2016211_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275056
CP027570.1\|AVO75168.1\|2006441_2014538_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380158
CP027570.1\|AVO75158.1\|1997913_1998303_+\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO75170.1\|2015201_2015768_+\|glycosyl-hydrolase-family-25	unknown	unknown	gnl\|CDD\|119376
CP027570.1\|AVO75156.1\|1995526_1995808_-\|transposase	unknown	unknown	gnl\|CDD\|366690
CP027570.1\|AVO75155.1\|1994615_1995530_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
CP027570.1\|AVO75157.1\|1995876_1997745_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369586
CP027570.1\|AVO75159.1\|1998534_1998813_-\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO75164.1\|2002594_2003284_+\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO75153.1\|1991575_1992193_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|181342

Protein	Function_ID	Function_description	E-value
CP027570.1\|AVO75166.1\|2004069_2005053_+\|hypothetical-protein	gnl\|CDD\|366654	pfam01464, SLT, Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.	1.68694e-12
CP027570.1\|AVO75168.1\|2006441_2014538_+\|hypothetical-protein	gnl\|CDD\|380158	NF032893, tail-700, PLxRFG domain-containing protein. This domain, nearly 700 residues long, begins with a nearly invariant motif YxPLxRFGx[YF]. It occurs as the extreme C-terminal domain of large size, some over 5000 amino acids long with an average of nearly 3000. The function is unknown.	1.43141e-08
CP027570.1\|AVO75170.1\|2015201_2015768_+\|glycosyl-hydrolase-family-25	gnl\|CDD\|119376	cd06414, GH25_LytC-like, The LytC lysozyme of Streptococcus pneumoniae is a bacterial cell wall hydrolase that cleaves the beta1-4-glycosydic bond located between the N-acetylmuramoyl-N-glucosaminyl residues of the cell wall polysaccharide chains. LytC is composed of a C-terminal glycosyl hydrolase family 25 (GH25) domain and an N-terminal choline-binding module (CBM) consisting of eleven homologous repeats that specifically recognizes the choline residues of pneumococcal lipoteichoic and teichoic acids. This domain arrangement is the reverse of the major pneumococcal autolysin, LytA, and the CPL-1-like lytic enzymes of the pneumococcal bacteriophages, in which the CBM (consisting of six repeats) is at the C-terminus. This model represents the C-terminal catalytic domain of the LytC-like enzymes.	2.84876e-52
CP027570.1\|AVO75154.1\|1992466_1994200_+\|hypothetical-protein	gnl\|CDD\|181342	PRK08271, PRK08271, anaerobic ribonucleoside triphosphate reductase; Provisional.	1.37495e-51
CP027570.1\|AVO75151.1\|1990792_1991332_+\|hypothetical-protein	gnl\|CDD\|274317	TIGR02826, hypothetical_protein, anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of radical SAM enzymes related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	3.6432e-21
CP027570.1\|AVO75152.1\|1991192_1991576_+\|hypothetical-protein	gnl\|CDD\|365862	pfam00085, Thioredoxin, Thioredoxin. Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise.	2.84782e-10
CP027570.1\|AVO75156.1\|1995526_1995808_-\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	5.87148e-05
CP027570.1\|AVO75155.1\|1994615_1995530_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.1151e-63
CP027570.1\|AVO75157.1\|1995876_1997745_+\|hypothetical-protein	gnl\|CDD\|369586	pfam07902, Gp58, gp58-like protein. Sequences found in this family are derived from a number of bacteriophage and prophage proteins. They are similar to gp58, a minor structural protein of Lactococcus delbrueckii bacteriophage LL-H.	0.000340416
CP027570.1\|AVO75171.1\|2015767_2016211_+\|hypothetical-protein	gnl\|CDD\|275056	TIGR04211, hypothetical_protein, SH3 domain protein. Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.	4.4367e-05
CP027570.1\|AVO75153.1\|1991575_1992193_+\|hypothetical-protein	gnl\|CDD\|181342	PRK08271, PRK08271, anaerobic ribonucleoside triphosphate reductase; Provisional.	1.09879e-77

>CP027570.1|AVO75159.1|1998534_1998813_-|hypothetical-protein
MEAVSALAFALDAETEAAFSEAFELASLTEALDAEVLALEACPVAVAADDAALSSLFRALVSLNLEACSEDLVLISLTDAFRSESCAATIDV
>CP027570.1|AVO75158.1|1997913_1998303_+|hypothetical-protein
MAKIKQTTPTHDFVVPQGEDFIFQLKLYTGDNTGKQPLNITGYQFRCEVREEAGDDSPAMTADCHIVNNVSGIVEIHFKADDSDTLELDGTYYGELSQYTYDVFEVDSDGLEKRILCGYLYVSPSVSNR
>CP027570.1|AVO75157.1|1995876_1997745_+|hypothetical-protein
MLTPWSKPIPKAPQALTVNTEFQGLLISYSPIPEDCIGICISINGEKHFTSDDSFHYYCVMGDFTVKAAYYDCFGEGTWTKEQTVSLVTLVDPAWLKRESITLEKVDKSIQTAVKDAQDSVTGIAELKTTTDSISSTVSSNKAAQDAQNKKFVSQISQTSSQVSSVVTDLSNAKTDLSNTKAQVNSNYTAILQNQNDIALRVKTGELIQQINLSKEGVAINGSKVHITGETVFDNGVIVSSYLGDKQIVGTKIADGAITTGKLSANSVTAGKLASNSVTTDKIAAGAIKSDKLDTGAVTADKIKAGAITADKLTSGAVTADKLAANTINLAGALKIVGGNVTLDEDGMTVKETNGSSVLFGENGMSFVDSNGHTFSGIGRFCTGIVNDGQTVKFANPWDITPTVFLFPIRLQTSAVGYTNINMYQDVEAINVSANGFTAVCKSVLKAGSGSNIPVSWECRGSNENPGGNGKNESYKYNINVPTSATHIWISIEISAFYQSYVRVGKNDYHAFVAWDEGSVSVSTNTGVSEARNNCVNGYDGQSAGEDTYSHYKRDTKSFTFDMDLSHVSTVTVTFSFSGACDSRSYGKILSYRTNLNSDVTVCRGTAGFIAIDPNTVPYTIS
>CP027570.1|AVO75156.1|1995526_1995808_-|transposase
MAKFNKEFKINAVKYYHEHRELGLVGCATNLGIAPQTLSRWQKQLKDNGEMPYRGSGNYASDEAKEIARLQRELRDAKDALNVLKKAISILDK
>CP027570.1|AVO75155.1|1994615_1995530_-|IS3-family-transposase
MTIAIYRSVQEEAENAHQAERRFSVSGVLSELDVSSSGYYDWAARKPSKQAQHRKEMKKKIQTIYDDSKQIYGAPKIAQVMQQNGDSISERTVGVYMRQMGIQACWVKHYTVTTRNSDFDVALVNILQECFNPEEPDQVWCSDITYIWTAEGFVYLESIMDLFSRKIIAWNLARNLDVAGIVKMLQEAKQCRKPGQLLVIHSDRGCQYVSQAYIRETSQMRRSYSKKGYPWDNACIESFHSLIKREWLNRFKIQNYQQAYLLVFEYINTFYNTVRIHSHCNYMSPDDYEKLYADFQKHNMRLGI
>CP027570.1|AVO75154.1|1992466_1994200_+|hypothetical-protein
MFDKYYFDSIFGGFRFPDGTQPDYDSLSRLQKFFMEWFRKERKKELLTYPVLTAAVLLDEDKKPKDGDFAWFLAEEMSKGLSFFIYESQSADSLASCCFDANQRVLVRNEDGVKLIRIGDFKPMSNLTIFFDGSWVKGSFVKATPTDKMYRIVTSNKKEVFCTSNHIFPTMDGDKRADEITTDDWLMFNDRAYKEGSGEYKDGFLIGMYLGDGSIYEREKCNSVEVTLSLNEDKVKKCIEYLPGWHLYSSKNNVIFAKTTDKNIAEFIKYWVKGSRCNTKELNMDVCNKSLDFRRGILDGFYATDGGNSNRIYTTSKKLAEQMEAMLTTMGIQTILDVSDRTNEKVVVRGEEFTRNFPLYCIRWYEPKNKRSMGDVYKITINGTFFKVSEVQEITNYDEPVYCFNMADGKEPYFTLANGIQTHNCRLRNELADNTFSYTLGAGGVSTGSFRVITINMNRYVQQYESKLPFGDLISRIHKYLAAHRAVIKHYIELGMLPAYTAQFINFDTQFGTIGINGMLEAMEYKGFSPTVDKETYQQAVSKYLKAIYDLNKADMVVYGFRFNTEFVPKMRGHIAA
>CP027570.1|AVO75153.1|1991575_1992193_+|hypothetical-protein
MTNKKSFFNYLTPEQIQKKVDFINFYIGATNNASASLVDPNSNVSEKNMGTLKEEMYKFENIQVSRKIIKDKITEMFGDDLADQYEEDIESHLLYCHDETLAAFLPYCASVTMYPFLLNGTKCLGGTSKAPKNLQSFCGSFVNLVYQLATNWAGATATVEFLMYFDYFARKQYGDNYLSVARDRIAQELQGVVYALNQPAAARGK
>CP027570.1|AVO75152.1|1991192_1991576_+|hypothetical-protein
MRKTKEGLILRQRTSGSMNMIPLIGCGRIKPKNISRGVIIMKKKICKFYIDNCFHCNRISGTFAKLAEKYKNEIDFENKRVESSLMEKKYNLHIYPTVVVYDGDKEIDRIEGVIPPEVLKDFVEEAL
>CP027570.1|AVO75151.1|1990792_1991332_+|hypothetical-protein
MNSFNPMDVSNCKLPVVNKGITLTEIPNRISVFFEIGNCTCHCDGCHSPELWDTNYTIPNMTVQEIVDYVDEQYKLGANAVVLMGGMNNKDVSKDVFTILLLELSTRQVGIYVGSDDLKWLPLLPVRWIKAGGYEKDKGGLDSPTTNQRFYEYDPTNRVWEDKTKEYFQRSDNNEEENL
>CP027570.1|AVO75150.1|1990334_1990787_+|hypothetical-protein
MTSLEKNLLDQVTFIVDKENRIVKCLPKYAKEMGLQRATECIVANMVNDKMEIYAVSESGLLFTPAFKQYRLNKNQCFAVAKCSPNDTFDEKVGKRVAFNKLKLRLVRVAAKVSAKISYNASQACICFDLDTIDALDNLADTMYNNKKKE
>CP027570.1|AVO75162.1|2000798_2002244_+|hypothetical-protein
MDVATDPWLLHSKENRAQVIENMEFDAEGERLISRRGLGSPLYTFPADIFYIWYDYGLNNYIVFLKNKNVYTYEFGKTPTFIGTINGDVTHKPQLARFTNANGTKLLISSGSKLQYYEYSGTSINTNEQMPECDEVMERFSRVLVTHSSTNNIKYSGVLDPMNWTENSNDASAMKDLDVGDVSAVVGIYPLASELIVFKANGRIYKIANEPEDWNVTLVGTDSDFIARDAMTNLGEDVVYFSRQGLRSLQTTETYGNFKSQEIGEAMNPEMKKDTGAPWLFKSQRTHQLFVNPNNGPVIYVYHYQLGAFTKWIFPKPIQTIAEGTEKTLVGCGKELFELSSSNHTDVVAGTETKIHQRIVSAILGDLNVMTLYRSHLIIDSEDAGTAKLTVNDVSWDWNWTKEKQREEFKTQIRADKMTFTFETDDIIVWHLWAAVIVQQYVTMTSEGTSSGRGSSWSKGSSWGQGTFDGSVSDSDGSPYG
>CP027570.1|AVO75163.1|2002236_2002608_+|hypothetical-protein
MVNTKDVLFYIEKYDKKLKSHFFEDWDLKRFPFVLLMPDGSFSTYGVKPDAIEIGPTSGHLRTMLTIYEGMARHIGIAKLRTFTTRNPIAYAKLSGATLVDSIEEYGQPTEYIFEKEVLNGEK
>CP027570.1|AVO75164.1|2002594_2003284_+|hypothetical-protein
MGKSKTEYHERPLSPEERQLYAQQVQYMQTIQPGIDALIAKGMSNIKKTYDPDWGKVFDTYSSNIQDILDRQANLLDGNLPSQWQTARQNYYNRLYENTMGQGLQQMAKNGVVGSSRMNTATNDWQKNLSAQMSKDYTNDVNLYNNLLNTRESWLQNGFNTQAQAAEQSRRQATDYFNAARGTQQSNTAALSAIGNNENGRGYLTQSGGGFGNLLGGLVDMGSSFFGRR
>CP027570.1|AVO75165.1|2003295_2004060_+|hypothetical-protein
MLYIPNDKTSDPRYNLGQIAGLALGKAYEARTSREAGKQVQNQRAKEAYDIQNQQNQALQGAYNAYIQAKQKEQDEGQLAAKNYNDNPTPENFQKLVDFVHKVHPGAEINNTAMTDALNYSKSGQSASLQPYRQAAMSAAQVINPYVDFSSSDWGTDTYNMGLNRANYTKNFEESNKGKTINGKGDKKYREFVDYNSTNPYNAGIQGPLQPNLPQAQPLNLKLNTPSPTPMTLQDAQPLGNYFNFGGLQKYVNQ
>CP027570.1|AVO75166.1|2004069_2005053_+|hypothetical-protein
MAGYASYIVDAANQYGIDPNIALAIAARETGGDDVNAINMADGGGLMQITDGSAADYGVNDLYPDWATDPQQNALGGMLILKKKIDEQGGDVWAGVRAYNGAGPMADQYLAQVQQNYNNLGGSGKGTFNFQAKDAQNRPFLNILTHLRTSDPNEPFDYKSISEIMAQSNPDVRNAIDAQKLTSRDYVNDTNFMSPDVAKLVRPTSQTLMQNRIDEIKDNMGQQMLQDNLRKGISAINLINKSNNVDNKGMYSGLMKSIGIDVPSNVDQYANSGDMLDSMIQDAENDRKYNMQVQKAQFAQQQRTAQQGLLQDKLNHMNKMYSMMGGA
>CP027570.1|AVO75167.1|2005049_2006423_+|hypothetical-protein
MRISYADGFLGQTMKNGTNGCAEAVGLMGAGNSQFLANEYNNGQYSVPGMVSDAQQAGIPVIPYQAGAANPNDVIVYGDNDHVVLSDGNGGYYGNSSSQNQIVHGSDATQMGGLQPTAIIKTGGQGGSFNFQAKDANGNPFINLAAKIRTSNPNEPFDQQSLMDILSQPTRSYAHEKRIHYLTDRDYQGDLLFLNPDVARWMKDSAKQLNDNRDADLKEQIDQANQQTRLKQAMQLAQLINGSGSVDNRRGYAAMAKMFGINLPTNDDQFVNSSDLLKTQVQMNNAERNYNFQQQQAKQAQDNWQKEFDLKKAIQDRQAQIEEQRLALAAARSAGGGSRYGGGGSSGKGPHYSIGDIAKIKETLNAPFQQVYDAAADGSMSGDEIREALKNAEYENINTLSMLEPDGGPGSAYGQEVEDNYVNKLKDKFGEDLSDQEHTWTNNPITRTLHDIFPSVF
>CP027570.1|AVO75168.1|2006441_2014538_+|hypothetical-protein
MAGRTTEDYLQALYDRAEANDQYLDSVIAPDDGGTYDSFGDGGFLDSAINGALNGLGSSLGSIGTYMNQEFGFGQGLEDFGDAISQGRQARRQFTRNDRLFDFITDPNGLTYTAFNLVGSSAPDLAVTGAVGAATGGIGGAAVGLGLKAAKAARLAKTASSLEKAIAVGTDASELSTGARIARAAFNAAPEIAGNVAGGYLDAASEAGDTYNQAIQNGATQEEARNAMDTDFMDNIGMSIASNAVEMGMFKGAANAPKRLLSSATESTEQKAGEGLLGSLSDFGGKVADFADKRYSTRVLAHSVPGMAVESYTEGLQNEFQNSSITGEDVNYNPLEMGDESKDQMFMAGMGMIPTGLLGGIGHRRARRVSPADEVSNPVEVVNSPVEETVRNTPNTIQEESPIREDVPVTENIPVDETELTQQDLDAIPMNSQETTAPQQVDASLVQAGPKDFAQQLIDKMNNPTEYDLAEQEAYGKSDNQYQANQAIANLIDTEDGNVLGYNPVHGTSMMTGPERDDLVKAMIESPNLPIISDSKSAQPVAAILQQRNNDRYRQATAQSLIQKKNELGLPISQQELDNANSISPNTGFFPAQRKEIHVQEVANRKADREQHTQNIATAVSAIQEDIKQNGVYSDFYKPKSGDISDAGKARLNKLGVTPDDAGISKVLRTNSASATRSYELQKKEKQKATEQVIKDDFLKNGVHSKYYTSDGKFDSLPNEVKQEITKGAGGEVTHAIRNQIQTLSGKARAEDRVKTQTIANKKNHMDTVQRINSSRENRGVTLDAKKMEGLSAKEQRRQIEMANAQIAKRNRIAEVDAVRGFEKQRIDKSHEVTIESPFAQKLSQYANKGRDKEAITELHNFTENFFNYKKGLSMSRLLSKFPKKYRESVKEAVTSYVNARTQDKYNPQDHIQNIEQKVAEVDRQAKQVSDEKNRERARRSYENKKEIQKAEPKPVQGSAQDLLNIMSKVQDDESKSKPEAKPVKELSGATKAKKTRAALNEAKPKGKEEEIKTVRSAGKALAKEIRGKHLAKNDPIHYFLHHEELEKKYGERAATLSGKNASFVTVEDGKNVRKPYRGEYFQTGNHREPLVPSIVNWVNDGPVKVARAVNFPGDKALQNLVESGQYTQEEVSKAKTEYEKYKKQADDEKAEAQAETKERKARESENNAGTYLANTKEKRITSSEPLSYKYEDGMITSSTSDMDVKIPNGEIEAFGGDKVKLKDADKQDIADYLSDYYNIDTEPDNIKVTKENEVHVTDAFRYFFPDDVSKDIFNRLGEEDQKKFLADGYEVKGEDKNVQTDETTSDARGSNGPEHLEGDVVQRNSYPPRRNDAGRSGQETLGRRQRVSGQVQQASRGLGPEYRLTKLGNKLKKAIHLATPEGVSIDAPTLNKLINDSFGDLSPRLQSKIAEALDDMATVFIYDGEKEKTGALGRTYSEYNVIRIFKDALSGDKSTPTVLHETIHSLHAAIERGLGDKEYGINYITSNNFVDKEKDQLEDYRIEYTNRLIEQLREGEGFTNSWRILVYDHTIRNPKIVDYVCDKISKSKTLQESLKKNKELYDELFVAKTLSQLQLASKYPQYKSQLKGVEDRIIDMANKAVDGAGTLSSARASILEKAKVLKPFSNGTFTDKAVKAFLNFVENRNTPSADAMSIKERIDKQLHKVGIPTHEETAQRAALYAAGVLPGKERMSILQRQFEDPLHIFKKYFPDGMPIYRLADGARRKMEKFVGDYSQKFLDVFKGLDKDERKVFDSLVLKANEMHRDPMQVINLDDGIHLAVRHDAFIEHYDSAPEAIKKIQEIRNSGKYRLSKMIQESEENENAGFGKGFTVFALPKGSAAFKSEDAAQKYAKAHEKEAYISMIRSLSDKPMKSSQVDNVMSSFMKYRDMMDKVYETSAQAAKESGANYKLPKKLNGYFPQIHLPYVVWVKDKDTKTFVRTASFYNASEASKRAKELNQAGQEAYWAEINPINAMAHGDRLAKVDRMTEDQLKQLNDEGLISVSESNNDTGNYNEALKRVFNPLFKEHHTVAIKDVMSHIEKVNRYRSNTGSAVHDNYVKKLQSQIRVTGLYKKLQKMKKDAIISQDELNNIINSANMKQQFNPFFQKRSGASGYSQNVADSVYRYLITSGNFISKAKFYAEATAYYTSKYHKDIREEATTNEQKFLKTYIEANHRPTSVTALDRMINDYMNLLAEKDPTGIGSLLRRRYGHNLYTGLAKDTLSLQNLLKLGLFRPASLAVQAFQVLNANAKLGGNKYIGMSKYFRTGLKEATGSKNDAKWKELYDYIGINERSVAIDSEILGRPTGVFDKKILFGKSAKDLADKSMWFFNVGDKWARKATAIGGYLKAMDDFKELSHDEKKMMLDEAITSWQTKKDRARQNHYPFKDPKPTMASVRKEYVFNKTKDLVTETNFNYSVTDSPLAMTEAGVTGKLLLQFKKYPLFTLNFMLHNTKEENIRFLVPMFIMAGALGMPCANLVDDIFDKTTGHSPVMALKKGMINWAGGSSAKKALVNVALYGAPSLAGINLSGNIGLGDAIQFDLGPTVSTVSNIAQGNGIIRSLAPRLGALEEAVTGKKENKYGQITAKYTPYDQLLKVFGFRTMAETNSSDATRVMKLATQKYNECKSQAKKEYIKNPNTDNYEALKIYGMSDGDIAKLLKTKDTTAMETAIKTVPKKAKSPEAQEVRNLSKAAQEFVK
>CP027570.1|AVO75169.1|2014547_2014919_+|hypothetical-protein
MENFTTVVEALILICTALGGFREAILKPYFSHRDKEREWKEKYDQVIEERENEREERQKERAKMLGDKYDQLVQSISNLSNLVNRLGAEQQQMALDEARFHERFESVERRLDDIQKRVDSYSQ
>CP027570.1|AVO75170.1|2015201_2015768_+|glycosyl-hydrolase-family-25
MKGVDISENQSFIDWDALQEAGVEFVIVRAGYGQGHEDSKFKEYATEALNRGFKVGAYWFSYALDVDQARKEGEYCRDIIGNWGGLLELPVFFDQEYSSWRENNGWDSDSATAMCDAFADALNLNTGVYANYDWFTNVLDYDYLKGKYSIWLAQYDNSPSLECDIWQYSDSEQYGANQLDSNISYMEA
>CP027570.1|AVO75171.1|2015767_2016211_+|hypothetical-protein
MWNPIKTFSVGFCLVLLPFFVSFSFASSTTAEVPQTQTVQMSLEQYNRLKTKVAQLELNLTTLEQNSETDKQELTTLKKQLEDCKTAMSKAEQSSKTASDSLEKLETNLQILTEQTESLKHKLEIKNRQNKIAWIVAGTAILCAASK

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Click the colored protein region to show detailed information

Crispr_ID: CP027570_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027570_11

2183298-2184106

TypeI-F

I-F

Consensus_repeat	Method
GGTATCTGCCGAGTAGGCAGTTTAGAAA	PILER-CR
GGTATCTGCCGAGTAGGCAGTTTAGAAA	CRISPRCasFinder
GGTATCTGCCGAGTAGGCAGTTTAGAAA	CRT

13 spacers

cas8f,cas5f,cas7f,cas6f,cas1,cas3f

The CRISPR arrays of CP027570_11

>merge|CP027570|11|2183298-2184106|PILER-CR,CRISPRCasFinder,CRT
GGTATCTGCCGAGTAGGCAGTTTAGAAAATCATCATGTCCCGAATGGCCATACAACATGGGGTATCTGCCGAGTAGGCAGTTTAGAAAAGCCGCAAAACGCGCCCACAACGGCAAATAGCGGTATCTGCCGAGTAGGCAGTTTAGAAATCTTTGATGCAGCGGATCAGTCCTCTTTCATCGGTATCTGCCGAGTAGGCAGTTTAGAAAATTACGCTCACCGCCTAAGCAAAGCACGTATCGGTATCTGCCGAGTAGGCAGTTTAGAAAGACTTTTCGGCGACATTCTTTCGGACATTCTTGGTATCTGCCGAGTAGGCAGTTTAGAAATTCTGATGGCACCCCTTGCGGTGCAGACGAACGGTATCTGCCGAGTAGGCAGTTTAGAAAATGTAGTACAAAGGAAAACTTAAGAGAAAACATGGTATCTGCCGAGTAGGCAGTTTAGAAAAGCCGGTGTCACCACATAGTGGATGCGGCGCCGGTATCTGCCGAGTAGGCAGTTTAGAAATTATTGGGTGCGAAGCCTCGCGGTGTACGCCTGGTATCTGCCGAGTAGGCAGTTTAGAAAATAGGCAAAATCCCAGCCCGGTACATCGACATGGTATCTGCCGAGTAGGCAGTTTAGAAAATTATTCGAGCCGCCGCCGACAGCGATACGGAGGTATCTGCCGAGTAGGCAGTTTAGAAACATAACTGTATCGGTTGGTTTGTCTGTTAATCGGTATCTGCCGAGTAGGCAGTTTAGAAATATACCATGCTGAAAGCGTGGAATACAGGCCAGGTATCTGCCGAGTAGGCAGTATTAGTA

>CP027570|11|4|2183298-2184046|PILER-CR
GGTATCTGCCGAGTAGGCAGTTTAGAAA	ATCATCATGTCCCGAATGGCCATACAACATGG
GGTATCTGCCGAGTAGGCAGTTTAGAAA	AGCCGCAAAACGCGCCCACAACGGCAAATAGC
GGTATCTGCCGAGTAGGCAGTTTAGAAA	TCTTTGATGCAGCGGATCAGTCCTCTTTCATC
GGTATCTGCCGAGTAGGCAGTTTAGAAA	ATTACGCTCACCGCCTAAGCAAAGCACGTATC
GGTATCTGCCGAGTAGGCAGTTTAGAAA	GACTTTTCGGCGACATTCTTTCGGACATTCTT
GGTATCTGCCGAGTAGGCAGTTTAGAAA	TTCTGATGGCACCCCTTGCGGTGCAGACGAAC
GGTATCTGCCGAGTAGGCAGTTTAGAAA	ATGTAGTACAAAGGAAAACTTAAGAGAAAACAT
GGTATCTGCCGAGTAGGCAGTTTAGAAA	AGCCGGTGTCACCACATAGTGGATGCGGCGCC
GGTATCTGCCGAGTAGGCAGTTTAGAAA	TTATTGGGTGCGAAGCCTCGCGGTGTACGCCT
GGTATCTGCCGAGTAGGCAGTTTAGAAA	ATAGGCAAAATCCCAGCCCGGTACATCGACAT
GGTATCTGCCGAGTAGGCAGTTTAGAAA	ATTATTCGAGCCGCCGCCGACAGCGATACGGA
GGTATCTGCCGAGTAGGCAGTTTAGAAA	CATAACTGTATCGGTTGGTTTGTCTGTTAATC
GGTATCTGCCGAGTAGGCAGTTTAGAAA

>CP027570|11|11|2183298-2184106|CRISPRCasFinder
GGTATCTGCCGAGTAGGCAGTTTAGAAA	ATCATCATGTCCCGAATGGCCATACAACATGG
GGTATCTGCCGAGTAGGCAGTTTAGAAA	AGCCGCAAAACGCGCCCACAACGGCAAATAGC
GGTATCTGCCGAGTAGGCAGTTTAGAAA	TCTTTGATGCAGCGGATCAGTCCTCTTTCATC
GGTATCTGCCGAGTAGGCAGTTTAGAAA	ATTACGCTCACCGCCTAAGCAAAGCACGTATC
GGTATCTGCCGAGTAGGCAGTTTAGAAA	GACTTTTCGGCGACATTCTTTCGGACATTCTT
GGTATCTGCCGAGTAGGCAGTTTAGAAA	TTCTGATGGCACCCCTTGCGGTGCAGACGAAC
GGTATCTGCCGAGTAGGCAGTTTAGAAA	ATGTAGTACAAAGGAAAACTTAAGAGAAAACAT
GGTATCTGCCGAGTAGGCAGTTTAGAAA	AGCCGGTGTCACCACATAGTGGATGCGGCGCC
GGTATCTGCCGAGTAGGCAGTTTAGAAA	TTATTGGGTGCGAAGCCTCGCGGTGTACGCCT
GGTATCTGCCGAGTAGGCAGTTTAGAAA	ATAGGCAAAATCCCAGCCCGGTACATCGACAT
GGTATCTGCCGAGTAGGCAGTTTAGAAA	ATTATTCGAGCCGCCGCCGACAGCGATACGGA
GGTATCTGCCGAGTAGGCAGTTTAGAAA	CATAACTGTATCGGTTGGTTTGTCTGTTAATC
GGTATCTGCCGAGTAGGCAGTTTAGAAA	TATACCATGCTGAAAGCGTGGAATACAGGCCA
GGTATCTGCCGAGTAGGCAGTATTAGTA

>CP027570|11|4|2183298-2184106|CRT
GGTATCTGCCGAGTAGGCAGTTTAGAAA	ATCATCATGTCCCGAATGGCCATACAACATGG
GGTATCTGCCGAGTAGGCAGTTTAGAAA	AGCCGCAAAACGCGCCCACAACGGCAAATAGC
GGTATCTGCCGAGTAGGCAGTTTAGAAA	TCTTTGATGCAGCGGATCAGTCCTCTTTCATC
GGTATCTGCCGAGTAGGCAGTTTAGAAA	ATTACGCTCACCGCCTAAGCAAAGCACGTATC
GGTATCTGCCGAGTAGGCAGTTTAGAAA	GACTTTTCGGCGACATTCTTTCGGACATTCTT
GGTATCTGCCGAGTAGGCAGTTTAGAAA	TTCTGATGGCACCCCTTGCGGTGCAGACGAAC
GGTATCTGCCGAGTAGGCAGTTTAGAAA	ATGTAGTACAAAGGAAAACTTAAGAGAAAACAT
GGTATCTGCCGAGTAGGCAGTTTAGAAA	AGCCGGTGTCACCACATAGTGGATGCGGCGCC
GGTATCTGCCGAGTAGGCAGTTTAGAAA	TTATTGGGTGCGAAGCCTCGCGGTGTACGCCT
GGTATCTGCCGAGTAGGCAGTTTAGAAA	ATAGGCAAAATCCCAGCCCGGTACATCGACAT
GGTATCTGCCGAGTAGGCAGTTTAGAAA	ATTATTCGAGCCGCCGCCGACAGCGATACGGA
GGTATCTGCCGAGTAGGCAGTTTAGAAA	CATAACTGTATCGGTTGGTTTGTCTGTTAATC
GGTATCTGCCGAGTAGGCAGTTTAGAAA	TATACCATGCTGAAAGCGTGGAATACAGGCCA
GGTATCTGCCGAGTAGGCAGTATTAGTA

Protein	Signature genes	Signature genes Name	Protein_function
CP027570.1\|AVO75319.1\|2196020_2196230_+\|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	gnl\|CDD\|376482
CP027570.1\|AVO75306.1\|2176855_2177362_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|223695
CP027570.1\|AVO75309.1\|2178978_2180682_-\|DUF814-domain-containing-protein	unknown	unknown	gnl\|CDD\|224212
CP027570.1\|AVO75307.1\|2177390_2178155_+\|adenosylmethionine-decarboxylase	unknown	unknown	gnl\|CDD\|235480
CP027570.1\|AVO75310.1\|2180961_2182113_-\|YibE/F-family-protein	unknown	unknown	gnl\|CDD\|377940
CP027570.1\|AVO75633.1\|2195086_2195383_+\|DUF370-domain-containing-protein	unknown	unknown	gnl\|CDD\|179823
CP027570.1\|AVO75308.1\|2178170_2178803_+\|class-II-aldolase/adducin-family-protein	unknown	unknown	gnl\|CDD\|376358
CP027570.1\|AVO75301.1\|2173756_2174206_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|223894
CP027570.1\|AVO75305.1\|2176268_2176859_+\|XTP/dITP-diphosphatase	unknown	unknown	gnl\|CDD\|234648
CP027570.1\|AVO75311.1\|2184203_2185355_+\|hypothetical-protein	cas8f	cd09735_cas8f_CAS-I-F	gnl\|CDD\|378220
CP027570.1\|AVO75318.1\|2195390_2196005_+\|guanylate-kinase	unknown	unknown	gnl\|CDD\|234719
CP027570.1\|AVO75304.1\|2175593_2176256_+\|F420-0:Gamma-glutamyl-ligase	unknown	unknown	gnl\|CDD\|376711
CP027570.1\|AVO75313.1\|2186253_2187276_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	cd09677_cas7f_CAS-I-F	gnl\|CDD\|378222
CP027570.1\|AVO75317.1\|2194199_2195087_+\|YicC-family-protein	unknown	unknown	gnl\|CDD\|236993
CP027570.1\|AVO75315.1\|2189662_2190646_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
CP027570.1\|AVO75316.1\|2190626_2193950_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|274201
CP027570.1\|AVO75312.1\|2185351_2186239_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
CP027570.1\|AVO75302.1\|2174195_2174999_+\|glutamate-racemase	unknown	unknown	gnl\|CDD\|234851
CP027570.1\|AVO75303.1\|2175036_2175579_+\|hypothetical-protein	unknown	unknown	unknown
CP027570.1\|AVO75314.1\|2187272_2187839_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|378224

Protein	Function_ID	Function_description	E-value
CP027570.1\|AVO75319.1\|2196020_2196230_+\|DNA-directed-RNA-polymerase-subunit-omega	gnl\|CDD\|376482	pfam01192, RNA_pol_Rpb6, RNA polymerase Rpb6. Rpb6 is an essential subunit in the eukaryotic polymerases Pol I, II and III. This family also contains the bacterial equivalent to Rpb6, the omega subunit. Rpb6 and omega are structurally conserved and both function in polymerase assembly.	8.3887e-22
CP027570.1\|AVO75306.1\|2176855_2177362_+\|metallophosphoesterase	gnl\|CDD\|223695	COG0622, COG0622, Predicted phosphoesterase [General function prediction only].	4.11942e-35
CP027570.1\|AVO75309.1\|2178978_2180682_-\|DUF814-domain-containing-protein	gnl\|CDD\|224212	COG1293, COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription].	2.64604e-104
CP027570.1\|AVO75307.1\|2177390_2178155_+\|adenosylmethionine-decarboxylase	gnl\|CDD\|235480	PRK05462, PRK05462, adenosylmethionine decarboxylase.	4.82995e-179
CP027570.1\|AVO75310.1\|2180961_2182113_-\|YibE/F-family-protein	gnl\|CDD\|377940	pfam07907, YibE_F, YibE/F-like protein. The sequences featured in this family are similar to two proteins expressed by Lactococcus lactis, YibE and YibF. Most of the members of this family are annotated as being putative membrane proteins, and in fact the sequences contain a high proportion of hydrophobic residues.	3.35255e-86
CP027570.1\|AVO75633.1\|2195086_2195383_+\|DUF370-domain-containing-protein	gnl\|CDD\|179823	PRK04323, PRK04323, hypothetical protein; Provisional.	1.13635e-44
CP027570.1\|AVO75308.1\|2178170_2178803_+\|class-II-aldolase/adducin-family-protein	gnl\|CDD\|376358	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain. This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.	3.868e-57
CP027570.1\|AVO75301.1\|2173756_2174206_+\|acyl-CoA-thioesterase	gnl\|CDD\|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	2.65119e-29
CP027570.1\|AVO75305.1\|2176268_2176859_+\|XTP/dITP-diphosphatase	gnl\|CDD\|234648	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed.	1.30783e-105
CP027570.1\|AVO75311.1\|2184203_2185355_+\|hypothetical-protein	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	2.63581e-133
CP027570.1\|AVO75318.1\|2195390_2196005_+\|guanylate-kinase	gnl\|CDD\|234719	PRK00300, gmk, guanylate kinase; Provisional.	9.81238e-117
CP027570.1\|AVO75304.1\|2175593_2176256_+\|F420-0:Gamma-glutamyl-ligase	gnl\|CDD\|376711	pfam01996, F420_ligase, F420-0:Gamma-glutamyl ligase. F420-0:Gamma-glutamyl ligase (EC:6.3.2.-) is an enzyme involved in F420 biosynthesis pathway. It catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0). This reaction produces polyglutamated F420 derivatives. GTP + F420-0 + n L-glutamate -> GDP + phosphate + F420-n.	0.000658691
CP027570.1\|AVO75313.1\|2186253_2187276_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
CP027570.1\|AVO75317.1\|2194199_2195087_+\|YicC-family-protein	gnl\|CDD\|236993	PRK11820, PRK11820, YicC family protein.	4.22397e-111
CP027570.1\|AVO75315.1\|2189662_2190646_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	1.29709e-169
CP027570.1\|AVO75316.1\|2190626_2193950_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
CP027570.1\|AVO75312.1\|2185351_2186239_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	9.74016e-137
CP027570.1\|AVO75302.1\|2174195_2174999_+\|glutamate-racemase	gnl\|CDD\|234851	PRK00865, PRK00865, glutamate racemase; Provisional.	4.91632e-86
CP027570.1\|AVO75314.1\|2187272_2187839_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	3.07832e-70

>CP027570.1|AVO75310.1|2180961_2182113_-|YibE/F-family-protein
MIPTASSKTKSFRKWLRFLLVLVLLCGGVWLLQVCQPVDKPQLVSTQGRVFEKATVTSIVQDNLQEDGSRVGDQIVMLQLKDGSTVEANCPNGLLFGTVAQPGMSVIVISSTVGQLSLHTVYNIDRTWPVYGFIAVFLALLRLIGGRKGVASAVALVLTFSCFIGFFFPMILRGMPPILAALVTAAVILGATLYLLNGWSAKSGAAFAATIGGIVIACLSAVIFGQIAHLSGYNVSNIENLMFVAQNTLIDVGQLLFAGILFASLGAVMDIAMDVTSAYSELVRHQPDLTRQQIFQAGMNVGRDVMGTMAATLILAFFGGSLGVWVLDYAYDLPYLQLINSNAVCIELMKGLSGSFGVIFTVPLAALCSAWLYGRKKGVSEKQ
>CP027570.1|AVO75309.1|2178978_2180682_-|DUF814-domain-containing-protein
MNLDGITLHCITNELADILKGGQISKIYQLDARSLYFRIFNDAGIHHLVITLDDSPRLYIAETMPPTPDVPTGLCMFLRKYYENGRIAAIAQLHLDRLIDIDIDVLDMSGRLVTRKIHVELMGKYSNVIFTEDGTIIEALIKTGKNKQALRTIAPHEPYAFPPNFMRMDPFSFSAQELAEMMTTGTDEPLKTWMLKRFNGMSTVVLNELAFDSGLSVTTPVGELSPADRFTWCRTVEEFGKRLANISGAYVYTVKGKEVIFPLELHSLSQYPRRHFKLIETYLSEYQATHRSLNSEQEQLQKKVAKLIEKQKRKIKRIAAEMKETKKMDTYKLYGDLLMIYAYEKHDHEKQVTVKNLLSEEQEKVTIPLNPAYSMTDNANRYYKRYTKMRNRKQMSAQLHEENQKHLDYLYSLEYALENTSTKDEIADIKAEMKQVGLISGHNKEKLKKESAQDILTLKVDGLDIWIGRNNRQNDFLTLKKAHPYDLWFHVKNQPGSHVILACHNVTPTDAQIERAAELAAYYSKARESSKVEVDCTLVRHVKKPVHAVPGYVIFTNQTTYIVEPKK
>CP027570.1|AVO75308.1|2178170_2178803_+|class-II-aldolase/adducin-family-protein
MDTKKTLCRIGTQMKEAGLVTACDGNISFRRSDGAIVITPSGVPKGELKPKHLLVVDLDGHVLEGTGKASSESSLHLEIYRKREDIKAIIHAHPITATALTVAGIPFRPDIVTEGALVLGPVPTVPYAPPGSEALALACAEAAEGADVFLMERHGAATVGQNLTQAFYRLETLETVAKMYRDSLIFAAAKDSQNNNPAAKAQPLSWYLKK
>CP027570.1|AVO75307.1|2177390_2178155_+|adenosylmethionine-decarboxylase
MKNNKLKLYGFNNLTKTLSFNMYDICYAVSDESRRQYIEYIDEQYNAERLTQILRNVSDIIGAHILNVASQDYDPQGASVTILISEEEVNDADVVCHLDKSHLTVHTYPESHPQKGIMTFRADIDVSTCGRISPLNALNYLLDSFDSDIVTLDYRVRGFTRDMNGKKLFIDHRINSIQNYIAPATRNRYDMIDVNVYQENIFHTKMVLHDFDLDNYLFNITKDDLTPRQQQQIRRQVHQEMLEIYNGRNMPSMR
>CP027570.1|AVO75306.1|2176855_2177362_+|metallophosphoesterase
MSTVRVGLVSDSHGRFECLSRMADTAPDVAAWIHCGDYCDDGEDLAIYTGVPVYAVLGNNDYMTRTNDPECRCITVGGIRIVAIHGCQWYGERRWQKLVELGRQHQADLVAFGHTHRRFIKTEGDLWVVNPGSIGLPRDNRQGTYAIVSIEDGAIKDVAFREIERIKR
>CP027570.1|AVO75305.1|2176268_2176859_+|XTP/dITP-diphosphatase
MAEKIVLATHNAGKIREFKSILEPLGYEAVSVHDVIADITEPEETGTTFAENALLKATYYMKATGLPCLADDSGIAADALGGRPGVYSARYAGPDCDDEANNQKLIADLAAFPPEQRTVHYICSLVLIWPDGRTVTAEGSCDGILRDFYAGQNGFGYDPLFYVPDKGKTMAELSMAEKNEISHRGKALKKLVEALS
>CP027570.1|AVO75304.1|2175593_2176256_+|F420-0:Gamma-glutamyl-ligase
MAELELVPVKTRILTDKDDIVDVIEEYAKDIVGPDDLVCSAESVVAITQRRYTRPEELTPSWQARLMRRFVPGEGSMASLYGMQAAMNLEGEWKMMFWFFVGFLAKLVGKNGVWYAKCRQASLTDDVTGTMPPFDKCIVYGPAEPDKVAEKIKQRMGCYGAVVADVNDLKRSAVLGHSKGLNPKEIAKILIDNPFGNASQKTPIVVIKNYAQFVKNRNKD
>CP027570.1|AVO75303.1|2175036_2175579_+|hypothetical-protein
MFFYVLLNVVIAVIGIVAVLYLLFRLFAWRQGDARFVIEARRRKPFELKQMTQDTAVFETEVPIHNAGRQLGTIMDFYPRTLLPREQYDKVIVHSQLANKAAERDDNYWESVIFNPGDKGMIRVTIALVSKDGNIREDLKTFPDMPIDLVYQVVSRSEWYIHKARITLKASEVQHALEQN
>CP027570.1|AVO75302.1|2174195_2174999_+|glutamate-racemase
MERNAQPIGVFDSGVGGLTVVAKLRMLLPHENIIYVGDTKRNPYGTRTPEEILAYTRDILRFMTAQGVKLVAIGCNTVTAVAYDTVVREVPYPLIGMSRGLRTAREISATKKIAVFATPLTIANHSHRKVAAAMDPDIEIVEQSCPALANLIERGVLDGPEIREPLKRYTEPVLHSGADTAIFGCTHFPFVQPLFEELCGDSIAFVDPAHEMALETLDVLKKDGLLNKQPEPGNLRLCFTAESGRGSRLAQHLIPANEFTAEEISLT
>CP027570.1|AVO75301.1|2173756_2174206_+|acyl-CoA-thioesterase
MITVVEKVRFYETDMMGIAHHSNHIRWFECGRCEYLAAAGIDLFALLDQGISYPIKSVSCEYISPINYADTIDIETRLVKLSRAQMVFSYRIVHHDDHRLLATGTTQNVFAHKDSGKVARLDEADYKKLQAMYAEDKAAAQAGGGVHGT
>CP027570.1|AVO75311.1|2184203_2185355_+|hypothetical-protein
MGIFMDYVVENSAKKKKTHNAWLQSVVDRIPSCTLSTHVGKFTNPEVKVNILDRGQGTNREYVSTDTVTHDIDIVVSSAAYLSTASLLMLPLEDRQLVLLHLKQRDLALKKDFTSLGIDYEKVCTDVDGLFQAALPDHTDQNLKQVYFPVSDGNYHLLTVMPSSSLLLQLKKRIDDMGSEEREHKKSGEAYTKIFSLTGIGFGGTKPQNISTLNSRQHGIAYLLPSLPPQLKLRTLRFPKRDFFRESIPYRPLNDLLHQLHVILKTEKNNMGIRMQRDEVTAALVDLVLMTAYEFRKHEAGWSNQPSFSNLPQAQKIFLDDAYKADRSEGTWQQMISRSFARYIISQYEKVMKSEKIVLGDAELSYLQDAMKNVLEEEVRYGL
>CP027570.1|AVO75312.1|2185351_2186239_+|type-I-F-CRISPR-associated-protein-Csy2
MREAVLIVSGIHIQNANALSSTFTIGFPAMTAWLGAVHALQRRLNRQSEFSELRFTKTGVICHGYQLQTHKGTGDWISSIIGTTNPLRKKGNAFVRPPFIEEARIHLLVDLVIEVQKLGPEMGDLLEPMVRENMLTMKIAGGDVLSVDKIDVQRIDRDNESAVVRKLILPLMSGYAVIERRDLMNEDTGEDTLGVLLHYLAVYSTPLVDKEGRVISWQQQRATPGWLVPLAVGFRALSPLQKVKRQRDAEKTHCFVEPLVTLGEFKMLHRLRSLDDLFWHYEYDETQGTYLCKNE
>CP027570.1|AVO75313.1|2186253_2187276_+|type-I-F-CRISPR-associated-protein-Csy3
MAKKTTDIASVLAFEKKMVASDAYMYSTTWENKEAVPIQLVEKSVRGTISNRLNKAAVRNDPLKLNAEVQKPNLQTVDSAALPLEQDTLKLCFTLKFLAGVQNPSACNNSTHYAGIQKMGQGYIEKYGFKEVAKRYAMNLANGRFLWRNRIGAEKIEIVVSMDEENKSWTFDAYQYDLKSFDQDDEQVDELSGYIADALCGKRNYAFFKVTAYVLLGSGQDVYPSEELILDKGRGKKSKVLYSVNGIAAMHSQKISNALRTIDTWYPDYEDGIGPIAIETYGSVTALGRAYRTPKDKKDFYTLFDAWSTGNELSCEEDEHYVMAVLVRGGVFGQSGKDDE
>CP027570.1|AVO75314.1|2187272_2187839_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MMFYQEITLYPSAEIPTSFLMTKVFMPLHFTLASQKEKLGEGRIGISFPRYTEESLGNKVRIFSKEREILESADIPQALRFLQDYIHLTAIREVAAPRIKGYAVYRRYQPDSSRFRKAKRYAKRNGISYEKAFKLMKTKKPRRLPYVQLKSKTTQQKFSLFIEKIEAPACEGNFNAYGLSQQATVPEF
>CP027570.1|AVO75315.1|2189662_2190646_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MKQQVETAALKAILHSKRANIYYLDKCRVMQKDGRVVYLTEGKKENLYWNIPIANTTVILLGTGTSITQAAMRLLASAGVLVGFCGGGGTPLFAGTEVEWLNPQSEYRPTSYVQGWLSFWFDEARRLAVAKHFQQQRCSFLQRTWEKDRELSDYGFYFDDPEVEDAITLYKKGIEKAASISELLSKEAAFTKKLYKYAAALTDFPDFSRNRDSGDWANIFLNHGNYLAYGLAACTLWVLGIPHGFAVMHGKTRRGALVFDVADLIKDAIVLPWAFICAYEGMAGQEFRQTCLQKFTEHHAMDFMFEEVKQCSLMYYKAGDSHDGIIY
>CP027570.1|AVO75316.1|2190626_2193950_+|type-I-F-CRISPR-associated-helicase-Cas3
MMVLFTSRSEKKAIPIVRRILDCFADRIGNDTWQTVITHEGLQAVNRLLRRTATKSTAVSCRWIRSRSRSQLLWIVGNRQRFDSEGRVPVNWTAKNILHNERENEWSRMPELKALTALASLLHDWGKCSDYFQAKLREHRLSADPFRHEWISCKLLEAVVHLSQAENDDAKWLTNLASGNIRDTDLQQTMMETEQRRLEPLPPVAEYLAWIILSHHRLPLLDKETRNEYREEAALSFEEMFRRLQAHWGYETETGKAEREACFTFSHGLLCDDGKRWQKEVKKWAGRLAGMKLDVPDKIRPLLLYSRLCLMLADHYISSQAAEDAKNWDVPALWANTDGTKKRKQYLEEHLVRVMKQALTIAHSLPQLQQKMERVCENAFLKKQSKERRFQWQDKAVAAIHHFRSQQEGDTAYFVVNIASTGCGKTMANAKIMQALSKDEKSLRYILALGLRTLTLQTGDEYRERIGLDNNELAVLIGSVAVKKLHDIEKYRDAGCDNLMQDEAESAVTGDVETLLDGTIVYEDTFSDAQKQFLELFFNPARSEEGDKNRAFLNKPVLVATIDYLMRATETIRGGKYMLPLLRLLSSDLVIDEIDDFGEKDLIAVSRLVHLAGMLGRNVVLSSATIPLDLAIGMHRAYMQGLKCYNQFFAEHKYGAAVLCDEFKTSVAAMPFSEADEGYIRFHREFIKRRAAKLMKQQVRRKGYITPVATSAEDLHEKQQAYFEQIRIQAEKLHDTHHCLDKRTGKEVSFGLIRMANIDPCVALSLYLLKHAAPEGYAFRVMVYHSRQLLLLRHEQEAYLDSVLKRKGEDGDIIDVQNPVLRQHIDKAAENKILFVLVATPVEEVGRDHDFDWAVIEPSSYRSIIQLSGRILRHRSLKKDISSPNVAVMQYNLRAFLRDKQIAFCRPGYESSKHSLVSHDMMKIIDVTALRQRIDAVPRIEKRNPLHPEMSLVDLEQRVMEDFNSDTAQGPECCNGWLKEYWWLTALPQVFNPFRENTLQEITAYRVYQDGKMSFRWYDGHEFILKENCWDISMYPDMTLAMEANLWLRRDYMAALKRYTSLQEDESEEKGIERTSKQFGEIVFPASENISWYYSDQLGLFKTKAVQ
>CP027570.1|AVO75317.1|2194199_2195087_+|YicC-family-protein
MRSMTGFGSGSGNDGKLAVTIEMRAVNQRFLELNIRMPHAYLALEDRLRSGIKAVLKRGKVDVFVTVQDLDPAAPDVRVDDAALGAVKTALQDVNDRFFAGKAVTLGDVTSLTKDWFVQTPPAIDAEASWPPFEAALQGALDSMVAMREQEGANIGRDLLSRADKMASLVETIASRKDLIVQAYEERLEKKILALMDKVQAAVPDEDRLLQEVAIYSDKVDFTEEVVRFRSHLNQLHTMLQSSGEVGRKLDFLIQEMNRETNTIGSKAGDLAVTEAVLQLKNEIEKIREQVQNIE
>CP027570.1|AVO75633.1|2195086_2195383_+|DUF370-domain-containing-protein
MNFNLLNIGFGNVVMGDKVVAIISPESAPIKRLVQDARDGNTLIDATFGRKTRSVLVMDNGWIILSALQPETISHRIVPAGSDAVLEEDTEAGEEEKE
>CP027570.1|AVO75318.1|2195390_2196005_+|guanylate-kinase
MNDSGLLIVVSGPSGAGKGTICSALREQFPNIQYSISMTTRKPRPGEVDGVNYYFADNARFEQLLAEDAFLEHAKVYDHYYGTPKKYVYQMLEEGKHVMLEIDIQGAMQVKKRYPQGVFIYIVPPSRDVLEKRLRGRQTDSDDVIAGRLAKARAELDWIDRYDYVIVNDELEKAVDEAASILKAEQCKVTRNAHRIAHTKELYK
>CP027570.1|AVO75319.1|2196020_2196230_+|DNA-directed-RNA-polymerase-subunit-omega
MLIKPTLESLMTKVDSKYTLVTLAAKRARQLTDGDEPLVDVDTTKVVSIAMEEIDQGKITYEAPRDGIK

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Crispr_ID: CP027570_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027570_12

2187990-2189638

TypeI-F

I-F

Consensus_repeat	Method
GTTATCTGCCGCACAGGCAGTTTAGAAA	PILER-CR
GTTATCTGCCGCACAGGCAGTTTAGAAA	CRISPRCasFinder
GTTATCTGCCGCACAGGCAGTTTAGAAA	CRT

27 spacers

cas6f,cas7f,cas5f,cas8f,cas1,cas3f

The CRISPR arrays of CP027570_12

>merge|CP027570|12|2187990-2189638|PILER-CR,CRISPRCasFinder,CRT
GTTATCTGCCGCACAGGCAGTTTAGAAATGTTATTGCCGATTATTCCGCAAATGGGCAACGTTATCTGCCGCACAGGCAGTTTAGAAAAATCCAAGATTCCGTTGCGGTATATTCTGAACGTTATCTGCCGCACAGGCAGTTTAGAAAAAATACGTTGTTGATGTCGCATCACTGCATAGCGTTATCTGCCGCACAGGCAGTTTAGAAATTTCAAGTACTTCCGACTGGAAATCATGTTCAGTTATCTGCCGCACAGGCAGTTTAGAAAGGTGCAAAGGTCCGCGGGTTCTCGATAGTAGCGTTATCTGCCGCACAGGCAGTTTAGAAAAAAGCCGGTTGATTTCTCGAGCCGTGAAAGGCGTTATCTGCCGCACAGGCAGTTTAGAAAACAAAGACCGATAAAGTAGTCCAGTAAGGATCGTTATCTGCCGCACAGGCAGTTTAGAAAAGAACCAGGAGAAAAGTGGAAGCACTTCAAAGGTTATCTGCCGCACAGGCAGTTTAGAAAAGATAAATGCCACAATTAGGAGCTTCTAGGCCGTTATCTGCCGCACAGGCAGTTTAGAAATGCTAAGGGGTACTGGTATATGTTGCTGACTTGTTATCTGCCGCACAGGCAGTTTAGAAATTAAAGTCGGTGCTTATCACTATGACTACAGCGTTATCTGCCGCACAGGCAGTTTAGAAATATGGCGGCTGTTACCGTCGGCAGGGGTCCAAGTTATCTGCCGCACAGGCAGTTTAGAAAGCAGGCCGACCCCGTGGCAACGACCGTCAACGGTTATCTGCCGCACAGGCAGTTTAGAAAATACAACTCATGACTGCCGGCATACAGTGGCTGTTATCTGCCGCACAGGCAGTTTAGAAAAGTTCCGCCACAATGTCCAGATGGCGCATGAAGTTATCTGCCGCACAGGCAGTTTAGAAAATAAGCGGTTGATTTTCTGCCGGCTGAACGTAGTTATCTGCCGCACAGGCAGTTTAGAAATCTATCGTCATAGGAATGAATACAGCAAAAATGTTATCTGCCGCACAGGCAGTTTAGAAAACGAAAGGACGGCGAAAAGAATTGCTGGACCAGTTATCTGCCGCACAGGCAGTTTAGAAATGTGAGATGAGAGTCAGCCCGGGGTCTAACATGTTATCTGCCGCACAGGCAGTTTAGAAAAAAAGGGAAACGGATGGCTGCACCCAAACATTGTTATCTGCCGCACAGGCAGTTTAGAAAAATTCGCAATTAAGCGTGAGATGGCCACGACGGTTATCTGCCGCACAGGCAGTTTAGAAAAGAACTTCAAAGCTTGGCTTTCGTTTGCCATTGTTATCTGCCGCACAGGCAGTTTAGAAATGCATGATGAGCATGGACTTCATACCGTAACCGTTATCTGCCGCACAGGCAGTTTAGAAATTCTCAGCTTAGGGAGAAGCAAACGAACCCGAGTTATCTGCCGCACAGGCAGTTTAGAAATGTCCCATGTCACTAAAGCCATTGTCTGCATAGTTATCTGCCGCACAGGCAGTTTAGAAATGTACCATGACCGGTGTTCCCTTGAAGACGGCGTTATCTGCCGCACAGGCAGTTTAGAAAATTTTGTCCGAATATGTTGTAGACAGCTCTTTGTTATCTGCCGCACAGGCAGTTGAAAAT

>CP027570|12|5|2187990-2189578|PILER-CR
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGTTATTGCCGATTATTCCGCAAATGGGCAAC
GTTATCTGCCGCACAGGCAGTTTAGAAA	AATCCAAGATTCCGTTGCGGTATATTCTGAAC
GTTATCTGCCGCACAGGCAGTTTAGAAA	AAATACGTTGTTGATGTCGCATCACTGCATAGC
GTTATCTGCCGCACAGGCAGTTTAGAAA	TTTCAAGTACTTCCGACTGGAAATCATGTTCA
GTTATCTGCCGCACAGGCAGTTTAGAAA	GGTGCAAAGGTCCGCGGGTTCTCGATAGTAGC
GTTATCTGCCGCACAGGCAGTTTAGAAA	AAAGCCGGTTGATTTCTCGAGCCGTGAAAGGC
GTTATCTGCCGCACAGGCAGTTTAGAAA	ACAAAGACCGATAAAGTAGTCCAGTAAGGATC
GTTATCTGCCGCACAGGCAGTTTAGAAA	AGAACCAGGAGAAAAGTGGAAGCACTTCAAAG
GTTATCTGCCGCACAGGCAGTTTAGAAA	AGATAAATGCCACAATTAGGAGCTTCTAGGCC
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGCTAAGGGGTACTGGTATATGTTGCTGACTT
GTTATCTGCCGCACAGGCAGTTTAGAAA	TTAAAGTCGGTGCTTATCACTATGACTACAGC
GTTATCTGCCGCACAGGCAGTTTAGAAA	TATGGCGGCTGTTACCGTCGGCAGGGGTCCAA
GTTATCTGCCGCACAGGCAGTTTAGAAA	GCAGGCCGACCCCGTGGCAACGACCGTCAACG
GTTATCTGCCGCACAGGCAGTTTAGAAA	ATACAACTCATGACTGCCGGCATACAGTGGCT
GTTATCTGCCGCACAGGCAGTTTAGAAA	AGTTCCGCCACAATGTCCAGATGGCGCATGAA
GTTATCTGCCGCACAGGCAGTTTAGAAA	ATAAGCGGTTGATTTTCTGCCGGCTGAACGTA
GTTATCTGCCGCACAGGCAGTTTAGAAA	TCTATCGTCATAGGAATGAATACAGCAAAAAT
GTTATCTGCCGCACAGGCAGTTTAGAAA	ACGAAAGGACGGCGAAAAGAATTGCTGGACCA
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGTGAGATGAGAGTCAGCCCGGGGTCTAACAT
GTTATCTGCCGCACAGGCAGTTTAGAAA	AAAAGGGAAACGGATGGCTGCACCCAAACATT
GTTATCTGCCGCACAGGCAGTTTAGAAA	AATTCGCAATTAAGCGTGAGATGGCCACGACG
GTTATCTGCCGCACAGGCAGTTTAGAAA	AGAACTTCAAAGCTTGGCTTTCGTTTGCCATT
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGCATGATGAGCATGGACTTCATACCGTAACC
GTTATCTGCCGCACAGGCAGTTTAGAAA	TTCTCAGCTTAGGGAGAAGCAAACGAACCCGA
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGTCCCATGTCACTAAAGCCATTGTCTGCATA
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGTACCATGACCGGTGTTCCCTTGAAGACGGC
GTTATCTGCCGCACAGGCAGTTTAGAAA

>CP027570|12|12|2187990-2189638|CRISPRCasFinder
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGTTATTGCCGATTATTCCGCAAATGGGCAAC
GTTATCTGCCGCACAGGCAGTTTAGAAA	AATCCAAGATTCCGTTGCGGTATATTCTGAAC
GTTATCTGCCGCACAGGCAGTTTAGAAA	AAATACGTTGTTGATGTCGCATCACTGCATAGC
GTTATCTGCCGCACAGGCAGTTTAGAAA	TTTCAAGTACTTCCGACTGGAAATCATGTTCA
GTTATCTGCCGCACAGGCAGTTTAGAAA	GGTGCAAAGGTCCGCGGGTTCTCGATAGTAGC
GTTATCTGCCGCACAGGCAGTTTAGAAA	AAAGCCGGTTGATTTCTCGAGCCGTGAAAGGC
GTTATCTGCCGCACAGGCAGTTTAGAAA	ACAAAGACCGATAAAGTAGTCCAGTAAGGATC
GTTATCTGCCGCACAGGCAGTTTAGAAA	AGAACCAGGAGAAAAGTGGAAGCACTTCAAAG
GTTATCTGCCGCACAGGCAGTTTAGAAA	AGATAAATGCCACAATTAGGAGCTTCTAGGCC
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGCTAAGGGGTACTGGTATATGTTGCTGACTT
GTTATCTGCCGCACAGGCAGTTTAGAAA	TTAAAGTCGGTGCTTATCACTATGACTACAGC
GTTATCTGCCGCACAGGCAGTTTAGAAA	TATGGCGGCTGTTACCGTCGGCAGGGGTCCAA
GTTATCTGCCGCACAGGCAGTTTAGAAA	GCAGGCCGACCCCGTGGCAACGACCGTCAACG
GTTATCTGCCGCACAGGCAGTTTAGAAA	ATACAACTCATGACTGCCGGCATACAGTGGCT
GTTATCTGCCGCACAGGCAGTTTAGAAA	AGTTCCGCCACAATGTCCAGATGGCGCATGAA
GTTATCTGCCGCACAGGCAGTTTAGAAA	ATAAGCGGTTGATTTTCTGCCGGCTGAACGTA
GTTATCTGCCGCACAGGCAGTTTAGAAA	TCTATCGTCATAGGAATGAATACAGCAAAAAT
GTTATCTGCCGCACAGGCAGTTTAGAAA	ACGAAAGGACGGCGAAAAGAATTGCTGGACCA
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGTGAGATGAGAGTCAGCCCGGGGTCTAACAT
GTTATCTGCCGCACAGGCAGTTTAGAAA	AAAAGGGAAACGGATGGCTGCACCCAAACATT
GTTATCTGCCGCACAGGCAGTTTAGAAA	AATTCGCAATTAAGCGTGAGATGGCCACGACG
GTTATCTGCCGCACAGGCAGTTTAGAAA	AGAACTTCAAAGCTTGGCTTTCGTTTGCCATT
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGCATGATGAGCATGGACTTCATACCGTAACC
GTTATCTGCCGCACAGGCAGTTTAGAAA	TTCTCAGCTTAGGGAGAAGCAAACGAACCCGA
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGTCCCATGTCACTAAAGCCATTGTCTGCATA
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGTACCATGACCGGTGTTCCCTTGAAGACGGC
GTTATCTGCCGCACAGGCAGTTTAGAAA	ATTTTGTCCGAATATGTTGTAGACAGCTCTTT
GTTATCTGCCGCACAGGCAGTTGAAAAT

>CP027570|12|5|2187990-2189638|CRT
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGTTATTGCCGATTATTCCGCAAATGGGCAAC
GTTATCTGCCGCACAGGCAGTTTAGAAA	AATCCAAGATTCCGTTGCGGTATATTCTGAAC
GTTATCTGCCGCACAGGCAGTTTAGAAA	AAATACGTTGTTGATGTCGCATCACTGCATAGC
GTTATCTGCCGCACAGGCAGTTTAGAAA	TTTCAAGTACTTCCGACTGGAAATCATGTTCA
GTTATCTGCCGCACAGGCAGTTTAGAAA	GGTGCAAAGGTCCGCGGGTTCTCGATAGTAGC
GTTATCTGCCGCACAGGCAGTTTAGAAA	AAAGCCGGTTGATTTCTCGAGCCGTGAAAGGC
GTTATCTGCCGCACAGGCAGTTTAGAAA	ACAAAGACCGATAAAGTAGTCCAGTAAGGATC
GTTATCTGCCGCACAGGCAGTTTAGAAA	AGAACCAGGAGAAAAGTGGAAGCACTTCAAAG
GTTATCTGCCGCACAGGCAGTTTAGAAA	AGATAAATGCCACAATTAGGAGCTTCTAGGCC
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGCTAAGGGGTACTGGTATATGTTGCTGACTT
GTTATCTGCCGCACAGGCAGTTTAGAAA	TTAAAGTCGGTGCTTATCACTATGACTACAGC
GTTATCTGCCGCACAGGCAGTTTAGAAA	TATGGCGGCTGTTACCGTCGGCAGGGGTCCAA
GTTATCTGCCGCACAGGCAGTTTAGAAA	GCAGGCCGACCCCGTGGCAACGACCGTCAACG
GTTATCTGCCGCACAGGCAGTTTAGAAA	ATACAACTCATGACTGCCGGCATACAGTGGCT
GTTATCTGCCGCACAGGCAGTTTAGAAA	AGTTCCGCCACAATGTCCAGATGGCGCATGAA
GTTATCTGCCGCACAGGCAGTTTAGAAA	ATAAGCGGTTGATTTTCTGCCGGCTGAACGTA
GTTATCTGCCGCACAGGCAGTTTAGAAA	TCTATCGTCATAGGAATGAATACAGCAAAAAT
GTTATCTGCCGCACAGGCAGTTTAGAAA	ACGAAAGGACGGCGAAAAGAATTGCTGGACCA
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGTGAGATGAGAGTCAGCCCGGGGTCTAACAT
GTTATCTGCCGCACAGGCAGTTTAGAAA	AAAAGGGAAACGGATGGCTGCACCCAAACATT
GTTATCTGCCGCACAGGCAGTTTAGAAA	AATTCGCAATTAAGCGTGAGATGGCCACGACG
GTTATCTGCCGCACAGGCAGTTTAGAAA	AGAACTTCAAAGCTTGGCTTTCGTTTGCCATT
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGCATGATGAGCATGGACTTCATACCGTAACC
GTTATCTGCCGCACAGGCAGTTTAGAAA	TTCTCAGCTTAGGGAGAAGCAAACGAACCCGA
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGTCCCATGTCACTAAAGCCATTGTCTGCATA
GTTATCTGCCGCACAGGCAGTTTAGAAA	TGTACCATGACCGGTGTTCCCTTGAAGACGGC
GTTATCTGCCGCACAGGCAGTTTAGAAA	ATTTTGTCCGAATATGTTGTAGACAGCTCTTT
GTTATCTGCCGCACAGGCAGTTGAAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP027570.1\|AVO75319.1\|2196020_2196230_+\|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	gnl\|CDD\|376482
CP027570.1\|AVO75306.1\|2176855_2177362_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|223695
CP027570.1\|AVO75309.1\|2178978_2180682_-\|DUF814-domain-containing-protein	unknown	unknown	gnl\|CDD\|224212
CP027570.1\|AVO75310.1\|2180961_2182113_-\|YibE/F-family-protein	unknown	unknown	gnl\|CDD\|377940
CP027570.1\|AVO75313.1\|2186253_2187276_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	cd09677_cas7f_CAS-I-F	gnl\|CDD\|378222
CP027570.1\|AVO75322.1\|2199168_2200359_+\|methionine-adenosyltransferase	unknown	unknown	gnl\|CDD\|235374
CP027570.1\|AVO75633.1\|2195086_2195383_+\|DUF370-domain-containing-protein	unknown	unknown	gnl\|CDD\|179823
CP027570.1\|AVO75321.1\|2197606_2198869_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237177
CP027570.1\|AVO75308.1\|2178170_2178803_+\|class-II-aldolase/adducin-family-protein	unknown	unknown	gnl\|CDD\|376358
CP027570.1\|AVO75316.1\|2190626_2193950_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|274201
CP027570.1\|AVO75305.1\|2176268_2176859_+\|XTP/dITP-diphosphatase	unknown	unknown	gnl\|CDD\|234648
CP027570.1\|AVO75311.1\|2184203_2185355_+\|hypothetical-protein	cas8f	cd09735_cas8f_CAS-I-F	gnl\|CDD\|378220
CP027570.1\|AVO75318.1\|2195390_2196005_+\|guanylate-kinase	unknown	unknown	gnl\|CDD\|234719
CP027570.1\|AVO75323.1\|2200501_2202859_+\|primosomal-protein-N'	unknown	unknown	gnl\|CDD\|235514
CP027570.1\|AVO75320.1\|2196246_2197461_+\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	unknown	unknown	gnl\|CDD\|235513
CP027570.1\|AVO75317.1\|2194199_2195087_+\|YicC-family-protein	unknown	unknown	gnl\|CDD\|236993
CP027570.1\|AVO75307.1\|2177390_2178155_+\|adenosylmethionine-decarboxylase	unknown	unknown	gnl\|CDD\|235480
CP027570.1\|AVO75314.1\|2187272_2187839_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|378224
CP027570.1\|AVO75312.1\|2185351_2186239_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
CP027570.1\|AVO75315.1\|2189662_2190646_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676

Protein	Function_ID	Function_description	E-value
CP027570.1\|AVO75319.1\|2196020_2196230_+\|DNA-directed-RNA-polymerase-subunit-omega	gnl\|CDD\|376482	pfam01192, RNA_pol_Rpb6, RNA polymerase Rpb6. Rpb6 is an essential subunit in the eukaryotic polymerases Pol I, II and III. This family also contains the bacterial equivalent to Rpb6, the omega subunit. Rpb6 and omega are structurally conserved and both function in polymerase assembly.	8.3887e-22
CP027570.1\|AVO75306.1\|2176855_2177362_+\|metallophosphoesterase	gnl\|CDD\|223695	COG0622, COG0622, Predicted phosphoesterase [General function prediction only].	4.11942e-35
CP027570.1\|AVO75309.1\|2178978_2180682_-\|DUF814-domain-containing-protein	gnl\|CDD\|224212	COG1293, COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription].	2.64604e-104
CP027570.1\|AVO75310.1\|2180961_2182113_-\|YibE/F-family-protein	gnl\|CDD\|377940	pfam07907, YibE_F, YibE/F-like protein. The sequences featured in this family are similar to two proteins expressed by Lactococcus lactis, YibE and YibF. Most of the members of this family are annotated as being putative membrane proteins, and in fact the sequences contain a high proportion of hydrophobic residues.	3.35255e-86
CP027570.1\|AVO75313.1\|2186253_2187276_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
CP027570.1\|AVO75322.1\|2199168_2200359_+\|methionine-adenosyltransferase	gnl\|CDD\|235374	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated.	0
CP027570.1\|AVO75633.1\|2195086_2195383_+\|DUF370-domain-containing-protein	gnl\|CDD\|179823	PRK04323, PRK04323, hypothetical protein; Provisional.	1.13635e-44
CP027570.1\|AVO75321.1\|2197606_2198869_-\|hypothetical-protein	gnl\|CDD\|237177	PRK12704, PRK12704, phosphodiesterase; Provisional.	1.6457e-06
CP027570.1\|AVO75308.1\|2178170_2178803_+\|class-II-aldolase/adducin-family-protein	gnl\|CDD\|376358	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain. This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.	3.868e-57
CP027570.1\|AVO75316.1\|2190626_2193950_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
CP027570.1\|AVO75305.1\|2176268_2176859_+\|XTP/dITP-diphosphatase	gnl\|CDD\|234648	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed.	1.30783e-105
CP027570.1\|AVO75311.1\|2184203_2185355_+\|hypothetical-protein	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	2.63581e-133
CP027570.1\|AVO75318.1\|2195390_2196005_+\|guanylate-kinase	gnl\|CDD\|234719	PRK00300, gmk, guanylate kinase; Provisional.	9.81238e-117
CP027570.1\|AVO75323.1\|2200501_2202859_+\|primosomal-protein-N'	gnl\|CDD\|235514	PRK05580, PRK05580, primosome assembly protein PriA; Validated.	0
CP027570.1\|AVO75320.1\|2196246_2197461_+\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	gnl\|CDD\|235513	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated.	0
CP027570.1\|AVO75317.1\|2194199_2195087_+\|YicC-family-protein	gnl\|CDD\|236993	PRK11820, PRK11820, YicC family protein.	4.22397e-111
CP027570.1\|AVO75307.1\|2177390_2178155_+\|adenosylmethionine-decarboxylase	gnl\|CDD\|235480	PRK05462, PRK05462, adenosylmethionine decarboxylase.	4.82995e-179
CP027570.1\|AVO75314.1\|2187272_2187839_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	3.07832e-70
CP027570.1\|AVO75312.1\|2185351_2186239_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	9.74016e-137
CP027570.1\|AVO75315.1\|2189662_2190646_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	1.29709e-169

>CP027570.1|AVO75314.1|2187272_2187839_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MMFYQEITLYPSAEIPTSFLMTKVFMPLHFTLASQKEKLGEGRIGISFPRYTEESLGNKVRIFSKEREILESADIPQALRFLQDYIHLTAIREVAAPRIKGYAVYRRYQPDSSRFRKAKRYAKRNGISYEKAFKLMKTKKPRRLPYVQLKSKTTQQKFSLFIEKIEAPACEGNFNAYGLSQQATVPEF
>CP027570.1|AVO75313.1|2186253_2187276_+|type-I-F-CRISPR-associated-protein-Csy3
MAKKTTDIASVLAFEKKMVASDAYMYSTTWENKEAVPIQLVEKSVRGTISNRLNKAAVRNDPLKLNAEVQKPNLQTVDSAALPLEQDTLKLCFTLKFLAGVQNPSACNNSTHYAGIQKMGQGYIEKYGFKEVAKRYAMNLANGRFLWRNRIGAEKIEIVVSMDEENKSWTFDAYQYDLKSFDQDDEQVDELSGYIADALCGKRNYAFFKVTAYVLLGSGQDVYPSEELILDKGRGKKSKVLYSVNGIAAMHSQKISNALRTIDTWYPDYEDGIGPIAIETYGSVTALGRAYRTPKDKKDFYTLFDAWSTGNELSCEEDEHYVMAVLVRGGVFGQSGKDDE
>CP027570.1|AVO75312.1|2185351_2186239_+|type-I-F-CRISPR-associated-protein-Csy2
MREAVLIVSGIHIQNANALSSTFTIGFPAMTAWLGAVHALQRRLNRQSEFSELRFTKTGVICHGYQLQTHKGTGDWISSIIGTTNPLRKKGNAFVRPPFIEEARIHLLVDLVIEVQKLGPEMGDLLEPMVRENMLTMKIAGGDVLSVDKIDVQRIDRDNESAVVRKLILPLMSGYAVIERRDLMNEDTGEDTLGVLLHYLAVYSTPLVDKEGRVISWQQQRATPGWLVPLAVGFRALSPLQKVKRQRDAEKTHCFVEPLVTLGEFKMLHRLRSLDDLFWHYEYDETQGTYLCKNE
>CP027570.1|AVO75311.1|2184203_2185355_+|hypothetical-protein
MGIFMDYVVENSAKKKKTHNAWLQSVVDRIPSCTLSTHVGKFTNPEVKVNILDRGQGTNREYVSTDTVTHDIDIVVSSAAYLSTASLLMLPLEDRQLVLLHLKQRDLALKKDFTSLGIDYEKVCTDVDGLFQAALPDHTDQNLKQVYFPVSDGNYHLLTVMPSSSLLLQLKKRIDDMGSEEREHKKSGEAYTKIFSLTGIGFGGTKPQNISTLNSRQHGIAYLLPSLPPQLKLRTLRFPKRDFFRESIPYRPLNDLLHQLHVILKTEKNNMGIRMQRDEVTAALVDLVLMTAYEFRKHEAGWSNQPSFSNLPQAQKIFLDDAYKADRSEGTWQQMISRSFARYIISQYEKVMKSEKIVLGDAELSYLQDAMKNVLEEEVRYGL
>CP027570.1|AVO75310.1|2180961_2182113_-|YibE/F-family-protein
MIPTASSKTKSFRKWLRFLLVLVLLCGGVWLLQVCQPVDKPQLVSTQGRVFEKATVTSIVQDNLQEDGSRVGDQIVMLQLKDGSTVEANCPNGLLFGTVAQPGMSVIVISSTVGQLSLHTVYNIDRTWPVYGFIAVFLALLRLIGGRKGVASAVALVLTFSCFIGFFFPMILRGMPPILAALVTAAVILGATLYLLNGWSAKSGAAFAATIGGIVIACLSAVIFGQIAHLSGYNVSNIENLMFVAQNTLIDVGQLLFAGILFASLGAVMDIAMDVTSAYSELVRHQPDLTRQQIFQAGMNVGRDVMGTMAATLILAFFGGSLGVWVLDYAYDLPYLQLINSNAVCIELMKGLSGSFGVIFTVPLAALCSAWLYGRKKGVSEKQ
>CP027570.1|AVO75309.1|2178978_2180682_-|DUF814-domain-containing-protein
MNLDGITLHCITNELADILKGGQISKIYQLDARSLYFRIFNDAGIHHLVITLDDSPRLYIAETMPPTPDVPTGLCMFLRKYYENGRIAAIAQLHLDRLIDIDIDVLDMSGRLVTRKIHVELMGKYSNVIFTEDGTIIEALIKTGKNKQALRTIAPHEPYAFPPNFMRMDPFSFSAQELAEMMTTGTDEPLKTWMLKRFNGMSTVVLNELAFDSGLSVTTPVGELSPADRFTWCRTVEEFGKRLANISGAYVYTVKGKEVIFPLELHSLSQYPRRHFKLIETYLSEYQATHRSLNSEQEQLQKKVAKLIEKQKRKIKRIAAEMKETKKMDTYKLYGDLLMIYAYEKHDHEKQVTVKNLLSEEQEKVTIPLNPAYSMTDNANRYYKRYTKMRNRKQMSAQLHEENQKHLDYLYSLEYALENTSTKDEIADIKAEMKQVGLISGHNKEKLKKESAQDILTLKVDGLDIWIGRNNRQNDFLTLKKAHPYDLWFHVKNQPGSHVILACHNVTPTDAQIERAAELAAYYSKARESSKVEVDCTLVRHVKKPVHAVPGYVIFTNQTTYIVEPKK
>CP027570.1|AVO75308.1|2178170_2178803_+|class-II-aldolase/adducin-family-protein
MDTKKTLCRIGTQMKEAGLVTACDGNISFRRSDGAIVITPSGVPKGELKPKHLLVVDLDGHVLEGTGKASSESSLHLEIYRKREDIKAIIHAHPITATALTVAGIPFRPDIVTEGALVLGPVPTVPYAPPGSEALALACAEAAEGADVFLMERHGAATVGQNLTQAFYRLETLETVAKMYRDSLIFAAAKDSQNNNPAAKAQPLSWYLKK
>CP027570.1|AVO75307.1|2177390_2178155_+|adenosylmethionine-decarboxylase
MKNNKLKLYGFNNLTKTLSFNMYDICYAVSDESRRQYIEYIDEQYNAERLTQILRNVSDIIGAHILNVASQDYDPQGASVTILISEEEVNDADVVCHLDKSHLTVHTYPESHPQKGIMTFRADIDVSTCGRISPLNALNYLLDSFDSDIVTLDYRVRGFTRDMNGKKLFIDHRINSIQNYIAPATRNRYDMIDVNVYQENIFHTKMVLHDFDLDNYLFNITKDDLTPRQQQQIRRQVHQEMLEIYNGRNMPSMR
>CP027570.1|AVO75306.1|2176855_2177362_+|metallophosphoesterase
MSTVRVGLVSDSHGRFECLSRMADTAPDVAAWIHCGDYCDDGEDLAIYTGVPVYAVLGNNDYMTRTNDPECRCITVGGIRIVAIHGCQWYGERRWQKLVELGRQHQADLVAFGHTHRRFIKTEGDLWVVNPGSIGLPRDNRQGTYAIVSIEDGAIKDVAFREIERIKR
>CP027570.1|AVO75305.1|2176268_2176859_+|XTP/dITP-diphosphatase
MAEKIVLATHNAGKIREFKSILEPLGYEAVSVHDVIADITEPEETGTTFAENALLKATYYMKATGLPCLADDSGIAADALGGRPGVYSARYAGPDCDDEANNQKLIADLAAFPPEQRTVHYICSLVLIWPDGRTVTAEGSCDGILRDFYAGQNGFGYDPLFYVPDKGKTMAELSMAEKNEISHRGKALKKLVEALS
>CP027570.1|AVO75315.1|2189662_2190646_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MKQQVETAALKAILHSKRANIYYLDKCRVMQKDGRVVYLTEGKKENLYWNIPIANTTVILLGTGTSITQAAMRLLASAGVLVGFCGGGGTPLFAGTEVEWLNPQSEYRPTSYVQGWLSFWFDEARRLAVAKHFQQQRCSFLQRTWEKDRELSDYGFYFDDPEVEDAITLYKKGIEKAASISELLSKEAAFTKKLYKYAAALTDFPDFSRNRDSGDWANIFLNHGNYLAYGLAACTLWVLGIPHGFAVMHGKTRRGALVFDVADLIKDAIVLPWAFICAYEGMAGQEFRQTCLQKFTEHHAMDFMFEEVKQCSLMYYKAGDSHDGIIY
>CP027570.1|AVO75316.1|2190626_2193950_+|type-I-F-CRISPR-associated-helicase-Cas3
MMVLFTSRSEKKAIPIVRRILDCFADRIGNDTWQTVITHEGLQAVNRLLRRTATKSTAVSCRWIRSRSRSQLLWIVGNRQRFDSEGRVPVNWTAKNILHNERENEWSRMPELKALTALASLLHDWGKCSDYFQAKLREHRLSADPFRHEWISCKLLEAVVHLSQAENDDAKWLTNLASGNIRDTDLQQTMMETEQRRLEPLPPVAEYLAWIILSHHRLPLLDKETRNEYREEAALSFEEMFRRLQAHWGYETETGKAEREACFTFSHGLLCDDGKRWQKEVKKWAGRLAGMKLDVPDKIRPLLLYSRLCLMLADHYISSQAAEDAKNWDVPALWANTDGTKKRKQYLEEHLVRVMKQALTIAHSLPQLQQKMERVCENAFLKKQSKERRFQWQDKAVAAIHHFRSQQEGDTAYFVVNIASTGCGKTMANAKIMQALSKDEKSLRYILALGLRTLTLQTGDEYRERIGLDNNELAVLIGSVAVKKLHDIEKYRDAGCDNLMQDEAESAVTGDVETLLDGTIVYEDTFSDAQKQFLELFFNPARSEEGDKNRAFLNKPVLVATIDYLMRATETIRGGKYMLPLLRLLSSDLVIDEIDDFGEKDLIAVSRLVHLAGMLGRNVVLSSATIPLDLAIGMHRAYMQGLKCYNQFFAEHKYGAAVLCDEFKTSVAAMPFSEADEGYIRFHREFIKRRAAKLMKQQVRRKGYITPVATSAEDLHEKQQAYFEQIRIQAEKLHDTHHCLDKRTGKEVSFGLIRMANIDPCVALSLYLLKHAAPEGYAFRVMVYHSRQLLLLRHEQEAYLDSVLKRKGEDGDIIDVQNPVLRQHIDKAAENKILFVLVATPVEEVGRDHDFDWAVIEPSSYRSIIQLSGRILRHRSLKKDISSPNVAVMQYNLRAFLRDKQIAFCRPGYESSKHSLVSHDMMKIIDVTALRQRIDAVPRIEKRNPLHPEMSLVDLEQRVMEDFNSDTAQGPECCNGWLKEYWWLTALPQVFNPFRENTLQEITAYRVYQDGKMSFRWYDGHEFILKENCWDISMYPDMTLAMEANLWLRRDYMAALKRYTSLQEDESEEKGIERTSKQFGEIVFPASENISWYYSDQLGLFKTKAVQ
>CP027570.1|AVO75317.1|2194199_2195087_+|YicC-family-protein
MRSMTGFGSGSGNDGKLAVTIEMRAVNQRFLELNIRMPHAYLALEDRLRSGIKAVLKRGKVDVFVTVQDLDPAAPDVRVDDAALGAVKTALQDVNDRFFAGKAVTLGDVTSLTKDWFVQTPPAIDAEASWPPFEAALQGALDSMVAMREQEGANIGRDLLSRADKMASLVETIASRKDLIVQAYEERLEKKILALMDKVQAAVPDEDRLLQEVAIYSDKVDFTEEVVRFRSHLNQLHTMLQSSGEVGRKLDFLIQEMNRETNTIGSKAGDLAVTEAVLQLKNEIEKIREQVQNIE
>CP027570.1|AVO75633.1|2195086_2195383_+|DUF370-domain-containing-protein
MNFNLLNIGFGNVVMGDKVVAIISPESAPIKRLVQDARDGNTLIDATFGRKTRSVLVMDNGWIILSALQPETISHRIVPAGSDAVLEEDTEAGEEEKE
>CP027570.1|AVO75318.1|2195390_2196005_+|guanylate-kinase
MNDSGLLIVVSGPSGAGKGTICSALREQFPNIQYSISMTTRKPRPGEVDGVNYYFADNARFEQLLAEDAFLEHAKVYDHYYGTPKKYVYQMLEEGKHVMLEIDIQGAMQVKKRYPQGVFIYIVPPSRDVLEKRLRGRQTDSDDVIAGRLAKARAELDWIDRYDYVIVNDELEKAVDEAASILKAEQCKVTRNAHRIAHTKELYK
>CP027570.1|AVO75319.1|2196020_2196230_+|DNA-directed-RNA-polymerase-subunit-omega
MLIKPTLESLMTKVDSKYTLVTLAAKRARQLTDGDEPLVDVDTTKVVSIAMEEIDQGKITYEAPRDGIK
>CP027570.1|AVO75320.1|2196246_2197461_+|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC
MSLEKKKIVLGITGGIAAFKAASIASQLRKQGAEVKCIMTDHATKLITPLTMREISGNPVAVSMFDDVPEFNVEHIALARWADVFVIAPATADIIGKIANGIADDMLSTTVMATTAPVLIAPAMNTNMYLNPITQDNMVKLKKFGYHFIEPDSGHLACGIDGVGRLPEPDTIVDYIELLACRNDLLKGKKVLVTAGGTREPIDPVRFIGNHSSGRMGFAIAKAAVMAGAEVTLVAGTTDNLKTPVGLARRVDVGSTRDMKAAVDSYYDDCDLVIKSAAVADYRSAHPAENKIKKNDDTLTLEMAKNPDILYGLGQRKTHQTLVGFAAETTNVIEYGTKKLKKKNLDMLVANDVSAEGAGFKGTTNIATLLFPDGSMEKLDKMDKDELAAIIVARAAAIMAKKQG
>CP027570.1|AVO75321.1|2197606_2198869_-|hypothetical-protein
MTKLRPRDIFFNDPYFDYATCSKPGDLRLAKRVEVFGKWYKTPNLVTTLLSQERLTFSRYTGTNKEDALVLRIYERTADRLLINTYYTSQQNPEEIYAGTIHLERYDMAQTMESFSYMGIIDLLMLQTDSQILELTNVFEDVQMAKHAVAHALGIYLMAICDQPWSDEAVTGGQETPAMMMGKEKEELQQLREEKAQMDADKEELLRLRLEAKNRTTVLAELERLRQELESERAGREQERKQYEDRIRKQEQYIEKIKETASGQIAELLALRKELNKRQVRPDLSSGQAHRKVTPQEASRSAREPEDRGLDLPSFMTQRDYTRQLDRFLTGRQLALAGGDPDWQRRIQRRFGAILLISGQPGDDRLLKESALLVVNMEDGKTPLVRWAITEAKEKGCPILSIGPTNLNGFAKAIVGRVSG
>CP027570.1|AVO75322.1|2199168_2200359_+|methionine-adenosyltransferase
MAKNREFFTSESVTEGHPDKMADQISDSILDAILAKDKNARVACETLVTTGMVHVVGEISTTCYVDIPHIVRETIRDIGYTRAKYGFDCDTCGVLVSLDEQSPDIAMGVDDALEKKEGNTDKFDTIGAGDQGMMFGYASNETDDYMPLPISLAHRLARRLAKVRKDGTLPYLRPDGKTQVTVEYEDGKPVRIDTIVISAQHSPEVSREQIESDLLEFVIKPELPEGLFDDKTKLFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSAAYAARYVAKNVVAAGLADKCEIQLAYAIGVARPVSIHVETFGTGKVPNEKIVELIEKNFDLRPAGIIAMLDLQRPIYKQTAAYGHFGRNDLDLPWEKTDKADTLRKEAGL
>CP027570.1|AVO75323.1|2200501_2202859_+|primosomal-protein-N'
MFAEIIINTTAKRLQQTFSYIVPEGMAVRVGSRVLVPFGHRREEGIVVALQEHLAEPADFTLKPIEGLLSTQTGFQEEMIRTALWIRDYYVCNLSDALRLFMIDKKGLVRRDVVSAGPAQPQTADEARLQTYVAGKGRCEKGALSRRFGQDLVEKALASQVLTSRICYKNQIADKMEDWLSFAADDTEAILHGRRRQQELLQALKAKGEGPVSYWQGQGYSRNLMRRLCATGLACWSQRPARTTNVLPSLARDEAFSLTAEQQQALKVIGSDEHGKTYVLHGITSSGKTEIYMQLTSQALKKGKQVVVLVPEIALTGQIVRRFLRRFGDDVVVMHSQLSQGEKRNNWLRMQNGTSHICIGARSAVFAAAQSIGLFIVDEAHDSSYKQDEAPRYHAVAVARQRAAYYGCPVVLGSATPALADYYRALQGEYVLVELKERVGHRPLPAVQVVDMRDELARGNYRVVSDALLTLLEETLAARQQAIILLNRRGFSTFVMCRKCGYVVKCDTCDVAMVYHRQAAHLRCHYCDAEKPIPTVCPSCGSKYIKFFGSGTEKVEAQLHELLPTARIIRLDQDTTSRKHSGDRIIEAFRRHEYDILLGTQMVAKGHDFPGVSAVGILSADSLLNIPAYWAGERTFQLLTQAAGRAGRGDIPGRVIMQTYAPDHYVIQCAARQDYRAFYDQEVQFRKELGYPPFQEMAKILVQDESEEQVWRKANDVAAALNSWNQDHGDEVAVIGPYEDVIKKIRNKYRVVLSLTGKDLTAIKKAMQHLPACWQTGVIIDIDPM

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Crispr_ID: CP027570_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027570_13

2370827-2373476

Unclear

I-C

Consensus_repeat	Method
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CRT
GTCGCACCCTTCATGGGTGCGTGGATTGAAAT	PILER-CR
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CRISPRCasFinder

39 spacers

cas4,cas1,cas2

The CRISPR arrays of CP027570_13

>merge|CP027570|13|2370827-2373476|CRT,PILER-CR,CRISPRCasFinder
TTAACATTCTTTTTTCCCATGAAAGGTGAGACTTGTAAGTATCCGTACAAGGCGGAGCCTCCATGTGATTTCAATCCACGGACCCATGAAGGGTGCGACAGTAGCCGGATAAAAGCTTCGGCGACAACCAGCAAATTTCAATCCACGCACCCATGAAGGGTGCGACGTCAATGGTGCTGACTTATGGGAGATGGTAGACAGCATTTCAATCCACGCACCCATGAAGGGTGCGACGCCAATCCGGTCGAGGTACTTAGCCACGGCATCGGAATTTCAATCCACGCACCCATGAAGGGTGCGACCTGCTGTGTTAGTGGAACTAGCTTTTATCAGCAACATTTCAATCCACGCACCCATGAAGGGTGCGACATGTGATTTGTCGCTTATTCAAAGTACGCCAGTAATTTCAATCCACGCACCCATGAAGGGTGCGACGCAGATGGCGTCGAGGGCATCTGCGGCCATGCCGACATTTCAATCCACGCACCCATGAAAGGTGCGACCTGTTCGGGTGTCCGACCGTCTAAATCCTCCAGCGTATTTCAATCCACGCACCCATGAAGGGTGCGACACCGCAAGTACTCATGATTGACTGTGACCCGCAAGATTTCAATCCACGCACCCATGAAGGGTGCGACTGCGGCCGATACCAGGACGCCAATCAGTACTGCCCAATTTCAATCCACGCACCCATGAAGGGTGCGACCGGGACGATACCGGCGTCTTCCTGGATGAGTTCCATTTCAATCCACGCACCCATGAAGGGTGCGACGTAAAATGGCTGGAAACACAGATCTGCCCGGCTTGCATTTCAATCCACGCACCCATGAAGGGTGCGACATCGGATTTCGCGTGAAACGTCGTCCGCGGTCCTCATTTCAATCCACGCACCCATGAAGGGTGCGACGATGCTTACGGTCGTATGAAAAGGGTCTACCTCATATTTCAATCCACGCACCCATGAAGGGTGCGACCAGTTTAAAAGACAGCTCTTCTTGCCCTGGCCCGATATTTCAATCCACGCACCCATGAAGGGTGCGACCTGCTGTGTTAGTGGAACTAGCTTTTATCAGCAACATTTCAATCCACGCACCCATGAAGGGTGCGACACGGCGCGGAAATCTCATCCGGCGGACGCACACGGATTTCAATCCACGCACCCATGAAGGGTGCGACTTCATCAAGACTCGGATAAAGTCGTACTTCAACTATTTCAATCCACGCACCCATGAAGGGTGCGACGACGTGCCGCTTTCTTCAAGCATCACAGCCAACCAATTTCAATCCACGCACCCATGAAGGGTGCGACGTATGCATCTGTGAGGAAATCCGTCATGGTTTCAATTTCAATCCACGCACCCATGAAGGGTGCGACATACCCAGAAGCAGTGCCTTGTAGATGATAATTATATTTCAATCCACGCACCCATGAAGGGTGCGACTTCCAGCCAGGCCGCAGCCGTGTTCTGTTTGATATTATTTCAATCCACGCACCCATGAAGGGTGCGACTCTAAGGCATGGCATGGCGTCACAGGCGCCGTGAAATTTCAATCCACGCACCCATGAAGGGTGCGACGTAAGCCAGTTTTTCCCTTTTACAGATGTCAATGCATTTCAATCCACGCACCCATGAAGGGTGCGACCCCGGCCACCGCAACCACTAAACAGCCCGAACCGATTTCAATCCACGCACCCATGAAGGGTGCGACAAGATTCGTGTCTATGAGCAGTGGTTAGCAAAACTTATTTCAATCCACGCACCCATGAAGGGTGCGACAGCCCTTGATTACATCGTCGAAGCAGCAGAGAGCATATTTCAATCCACGCACCCATGAAGGGTGCGACGGGTCGCCAACTGCCGCGTACTCATATCCGCTGTAATTTCAATCCACGCACCCATGAAGGGTGCGACGGCGACGGCGGCCCCAGCCGGGCTGACGTGCTTATTTCAATCCACGCACCCATGAAGGGTGCGACCCTGCGGGCCGACGTCGATGCCCTGCCCATTGAGATTTCAATCCACGCACCCATGAAGGGTGCGACAAGACCGGCATGAACGTCGACCAGATGGACCTCATCATTTCAATCCACGCACCCATGAAGGGTGCGACGCATATTCAACTCCTTGGCCCGCTTCACCATATCGGATTTCAATCCACGCACCCATGAAGGGTGCGACGCGGCAGGCCCGGAACAACCGCAGGGCATCTTCCTGATTTCAATCCACGCACCCATGAAGGGTGCGACCTTTTCCCGGCTCTCAGACAAGCCGCGGCTGACGAATTTCAATCCACGCACCCATGAAGGGTGCGACCCAGGACCAGCTGGCCTTTCAAGGATATATCCAGTATTTCAATCCACGCACCCATGAAGGGTGCGACATGGGCCTGGGCGCCATCAGCTACGGCATCAACTTTATTTCAATCCACGCACCCATGAAGGGTGCGACTGGCCGACGGGACGTCTTCAAAGATATCGCTTTCCGATTTCAATCCACGCACCCATGAAGGGTGCGACGCGTTGATGTCCGCCAGGGGATACTGGGTATCTTTATTTCAATCCACGCACCCATGAAGGGTGCGACGTAGCAGAGGGCGGCATAGCCTGTAAGGAACGGATTTCAATCCACGCACCCATGAAGGGTGCGAC

>CP027570|13|6|2370827-2373476|CRT
TTAACATTCTTTTTTCCCATGAAAGGTGAGAC	TTGTAAGTATCCGTACAAGGCGGAGCCTCCATGTG
ATTTCAATCCACGGACCCATGAAGGGTGCGAC	AGTAGCCGGATAAAAGCTTCGGCGACAACCAGCAA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTCAATGGTGCTGACTTATGGGAGATGGTAGACAGC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCCAATCCGGTCGAGGTACTTAGCCACGGCATCGGA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CTGCTGTGTTAGTGGAACTAGCTTTTATCAGCAAC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ATGTGATTTGTCGCTTATTCAAAGTACGCCAGTA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCAGATGGCGTCGAGGGCATCTGCGGCCATGCCGAC
ATTTCAATCCACGCACCCATGAAAGGTGCGAC	CTGTTCGGGTGTCCGACCGTCTAAATCCTCCAGCGT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ACCGCAAGTACTCATGATTGACTGTGACCCGCAAG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TGCGGCCGATACCAGGACGCCAATCAGTACTGCCCA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CGGGACGATACCGGCGTCTTCCTGGATGAGTTCC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTAAAATGGCTGGAAACACAGATCTGCCCGGCTTGC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ATCGGATTTCGCGTGAAACGTCGTCCGCGGTCCTC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GATGCTTACGGTCGTATGAAAAGGGTCTACCTCAT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CAGTTTAAAAGACAGCTCTTCTTGCCCTGGCCCGAT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CTGCTGTGTTAGTGGAACTAGCTTTTATCAGCAAC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ACGGCGCGGAAATCTCATCCGGCGGACGCACACGG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TTCATCAAGACTCGGATAAAGTCGTACTTCAACT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GACGTGCCGCTTTCTTCAAGCATCACAGCCAACCA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTATGCATCTGTGAGGAAATCCGTCATGGTTTCA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ATACCCAGAAGCAGTGCCTTGTAGATGATAATTAT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TTCCAGCCAGGCCGCAGCCGTGTTCTGTTTGATATT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TCTAAGGCATGGCATGGCGTCACAGGCGCCGTGAA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTAAGCCAGTTTTTCCCTTTTACAGATGTCAATGC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CCCGGCCACCGCAACCACTAAACAGCCCGAACCG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	AAGATTCGTGTCTATGAGCAGTGGTTAGCAAAACTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	AGCCCTTGATTACATCGTCGAAGCAGCAGAGAGCAT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GGGTCGCCAACTGCCGCGTACTCATATCCGCTGTA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GGCGACGGCGGCCCCAGCCGGGCTGACGTGCTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CCTGCGGGCCGACGTCGATGCCCTGCCCATTGAG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	AAGACCGGCATGAACGTCGACCAGATGGACCTCATC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCATATTCAACTCCTTGGCCCGCTTCACCATATCGG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCGGCAGGCCCGGAACAACCGCAGGGCATCTTCCTG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CTTTTCCCGGCTCTCAGACAAGCCGCGGCTGACGA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CCAGGACCAGCTGGCCTTTCAAGGATATATCCAGT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ATGGGCCTGGGCGCCATCAGCTACGGCATCAACTTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TGGCCGACGGGACGTCTTCAAAGATATCGCTTTCCG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCGTTGATGTCCGCCAGGGGATACTGGGTATCTTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTAGCAGAGGGCGGCATAGCCTGTAAGGAACGG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC

>CP027570|13|6|2370894-2373476|PILER-CR
ATTTCAATCCACGGACCCATGAAGGGTGCGAC	AGTAGCCGGATAAAAGCTTCGGCGACAACCAGCAA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTCAATGGTGCTGACTTATGGGAGATGGTAGACAGC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCCAATCCGGTCGAGGTACTTAGCCACGGCATCGGA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CTGCTGTGTTAGTGGAACTAGCTTTTATCAGCAAC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ATGTGATTTGTCGCTTATTCAAAGTACGCCAGTA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCAGATGGCGTCGAGGGCATCTGCGGCCATGCCGAC
ATTTCAATCCACGCACCCATGAAAGGTGCGAC	CTGTTCGGGTGTCCGACCGTCTAAATCCTCCAGCGT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ACCGCAAGTACTCATGATTGACTGTGACCCGCAAG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TGCGGCCGATACCAGGACGCCAATCAGTACTGCCCA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CGGGACGATACCGGCGTCTTCCTGGATGAGTTCC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTAAAATGGCTGGAAACACAGATCTGCCCGGCTTGC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ATCGGATTTCGCGTGAAACGTCGTCCGCGGTCCTC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GATGCTTACGGTCGTATGAAAAGGGTCTACCTCAT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CAGTTTAAAAGACAGCTCTTCTTGCCCTGGCCCGAT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CTGCTGTGTTAGTGGAACTAGCTTTTATCAGCAAC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ACGGCGCGGAAATCTCATCCGGCGGACGCACACGG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TTCATCAAGACTCGGATAAAGTCGTACTTCAACT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GACGTGCCGCTTTCTTCAAGCATCACAGCCAACCA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTATGCATCTGTGAGGAAATCCGTCATGGTTTCA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ATACCCAGAAGCAGTGCCTTGTAGATGATAATTAT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TTCCAGCCAGGCCGCAGCCGTGTTCTGTTTGATATT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TCTAAGGCATGGCATGGCGTCACAGGCGCCGTGAA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTAAGCCAGTTTTTCCCTTTTACAGATGTCAATGC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CCCGGCCACCGCAACCACTAAACAGCCCGAACCG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	AAGATTCGTGTCTATGAGCAGTGGTTAGCAAAACTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	AGCCCTTGATTACATCGTCGAAGCAGCAGAGAGCAT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GGGTCGCCAACTGCCGCGTACTCATATCCGCTGTA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GGCGACGGCGGCCCCAGCCGGGCTGACGTGCTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CCTGCGGGCCGACGTCGATGCCCTGCCCATTGAG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	AAGACCGGCATGAACGTCGACCAGATGGACCTCATC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCATATTCAACTCCTTGGCCCGCTTCACCATATCGG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCGGCAGGCCCGGAACAACCGCAGGGCATCTTCCTG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CTTTTCCCGGCTCTCAGACAAGCCGCGGCTGACGA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CCAGGACCAGCTGGCCTTTCAAGGATATATCCAGT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ATGGGCCTGGGCGCCATCAGCTACGGCATCAACTTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TGGCCGACGGGACGTCTTCAAAGATATCGCTTTCCG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCGTTGATGTCCGCCAGGGGATACTGGGTATCTTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTAGCAGAGGGCGGCATAGCCTGTAAGGAACGG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC

>CP027570|13|13|2370894-2373476|CRISPRCasFinder
ATTTCAATCCACGGACCCATGAAGGGTGCGAC	AGTAGCCGGATAAAAGCTTCGGCGACAACCAGCAA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTCAATGGTGCTGACTTATGGGAGATGGTAGACAGC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCCAATCCGGTCGAGGTACTTAGCCACGGCATCGGA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CTGCTGTGTTAGTGGAACTAGCTTTTATCAGCAAC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ATGTGATTTGTCGCTTATTCAAAGTACGCCAGTA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCAGATGGCGTCGAGGGCATCTGCGGCCATGCCGAC
ATTTCAATCCACGCACCCATGAAAGGTGCGAC	CTGTTCGGGTGTCCGACCGTCTAAATCCTCCAGCGT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ACCGCAAGTACTCATGATTGACTGTGACCCGCAAG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TGCGGCCGATACCAGGACGCCAATCAGTACTGCCCA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CGGGACGATACCGGCGTCTTCCTGGATGAGTTCC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTAAAATGGCTGGAAACACAGATCTGCCCGGCTTGC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ATCGGATTTCGCGTGAAACGTCGTCCGCGGTCCTC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GATGCTTACGGTCGTATGAAAAGGGTCTACCTCAT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CAGTTTAAAAGACAGCTCTTCTTGCCCTGGCCCGAT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CTGCTGTGTTAGTGGAACTAGCTTTTATCAGCAAC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ACGGCGCGGAAATCTCATCCGGCGGACGCACACGG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TTCATCAAGACTCGGATAAAGTCGTACTTCAACT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GACGTGCCGCTTTCTTCAAGCATCACAGCCAACCA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTATGCATCTGTGAGGAAATCCGTCATGGTTTCA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ATACCCAGAAGCAGTGCCTTGTAGATGATAATTAT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TTCCAGCCAGGCCGCAGCCGTGTTCTGTTTGATATT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TCTAAGGCATGGCATGGCGTCACAGGCGCCGTGAA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTAAGCCAGTTTTTCCCTTTTACAGATGTCAATGC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CCCGGCCACCGCAACCACTAAACAGCCCGAACCG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	AAGATTCGTGTCTATGAGCAGTGGTTAGCAAAACTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	AGCCCTTGATTACATCGTCGAAGCAGCAGAGAGCAT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GGGTCGCCAACTGCCGCGTACTCATATCCGCTGTA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GGCGACGGCGGCCCCAGCCGGGCTGACGTGCTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CCTGCGGGCCGACGTCGATGCCCTGCCCATTGAG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	AAGACCGGCATGAACGTCGACCAGATGGACCTCATC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCATATTCAACTCCTTGGCCCGCTTCACCATATCGG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCGGCAGGCCCGGAACAACCGCAGGGCATCTTCCTG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CTTTTCCCGGCTCTCAGACAAGCCGCGGCTGACGA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CCAGGACCAGCTGGCCTTTCAAGGATATATCCAGT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ATGGGCCTGGGCGCCATCAGCTACGGCATCAACTTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TGGCCGACGGGACGTCTTCAAAGATATCGCTTTCCG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCGTTGATGTCCGCCAGGGGATACTGGGTATCTTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTAGCAGAGGGCGGCATAGCCTGTAAGGAACGG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
CP027570.1\|AVO75460.1\|2364443_2366609_-\|ATP-dependent-RecD-like-DNA-helicase	unknown	unknown	gnl\|CDD\|273632
CP027570.1\|AVO75468.1\|2377508_2378231_+\|DUF541-domain-containing-protein	unknown	unknown	gnl\|CDD\|225516
CP027570.1\|AVO75474.1\|2384108_2385851_-\|adenine-deaminase	unknown	unknown	gnl\|CDD\|223933
CP027570.1\|AVO75470.1\|2379346_2380411_-\|spermidine/putrescine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270381
CP027570.1\|AVO75469.1\|2378407_2379280_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|237571
CP027570.1\|AVO75647.1\|2362749_2363094_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237372
CP027570.1\|AVO75648.1\|2383172_2383931_-\|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|381594
CP027570.1\|AVO75463.1\|2368702_2368993_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP027570.1\|AVO75466.1\|2374397_2375633_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226458
CP027570.1\|AVO75457.1\|2361073_2361988_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
CP027570.1\|AVO75459.1\|2363783_2364431_-\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|223970
CP027570.1\|AVO75465.1\|2370030_2370696_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|187768
CP027570.1\|AVO75467.1\|2375876_2377178_-\|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl\|CDD\|376689
CP027570.1\|AVO75458.1\|2361984_2362266_-\|transposase	unknown	unknown	gnl\|CDD\|366690
CP027570.1\|AVO75464.1\|2369002_2370034_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
CP027570.1\|AVO75462.1\|2367083_2368535_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|223903
CP027570.1\|AVO75473.1\|2382020_2383091_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
CP027570.1\|AVO75461.1\|2366605_2366875_-\|chorismate-mutase	unknown	unknown	gnl\|CDD\|376623
CP027570.1\|AVO75471.1\|2380421_2381201_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098
CP027570.1\|AVO75472.1\|2381200_2382028_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224097

Protein	Function_ID	Function_description	E-value
CP027570.1\|AVO75460.1\|2364443_2366609_-\|ATP-dependent-RecD-like-DNA-helicase	gnl\|CDD\|273632	TIGR01448, recD_rel, helicase, putative, RecD/TraA family. This model describes a family similar to RecD, the exodeoxyribonuclease V alpha chain of TIGR01447. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. [Unknown function, Enzymes of unknown specificity].	0
CP027570.1\|AVO75468.1\|2377508_2378231_+\|DUF541-domain-containing-protein	gnl\|CDD\|225516	COG2968, COG2968, Uncharacterized conserved protein [Function unknown].	8.417e-44
CP027570.1\|AVO75474.1\|2384108_2385851_-\|adenine-deaminase	gnl\|CDD\|223933	COG1001, AdeC, Adenine deaminase [Nucleotide transport and metabolism].	0
CP027570.1\|AVO75470.1\|2379346_2380411_-\|spermidine/putrescine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270381	cd13663, PBP2_PotD_PotF_like_2, The periplasmic substrate-binding component of an uncharacterized active transport system closely related to spermidine and putrescine transporters; contains the type 2 periplasmic binding fold. This group represents the periplasmic substrate-binding domain that serves as a primary polyamine receptor of an uncharacterized ABC-type transport system from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, as well as plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.0989e-162
CP027570.1\|AVO75469.1\|2378407_2379280_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|237571	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional.	8.32912e-178
CP027570.1\|AVO75647.1\|2362749_2363094_-\|hypothetical-protein	gnl\|CDD\|237372	PRK13386, fliH, flagellar assembly protein H; Provisional.	0.000282433
CP027570.1\|AVO75648.1\|2383172_2383931_-\|lytic-transglycosylase-domain-containing-protein	gnl\|CDD\|381594	cd00254, LT-like, lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	5.36237e-32
CP027570.1\|AVO75463.1\|2368702_2368993_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	8.27564e-29
CP027570.1\|AVO75466.1\|2374397_2375633_+\|hypothetical-protein	gnl\|CDD\|226458	COG3949, COG3949, Uncharacterized membrane protein [Function unknown].	9.0951e-10
CP027570.1\|AVO75457.1\|2361073_2361988_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.1151e-63
CP027570.1\|AVO75459.1\|2363783_2364431_-\|amidophosphoribosyltransferase	gnl\|CDD\|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	1.35135e-41
CP027570.1\|AVO75465.1\|2370030_2370696_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	1.15157e-33
CP027570.1\|AVO75467.1\|2375876_2377178_-\|phosphomethylpyrimidine-synthase-ThiC	gnl\|CDD\|376689	pfam01964, ThiC_Rad_SAM, Radical SAM ThiC family. ThiC is found within the thiamine biosynthesis operon. ThiC is involved in pyrimidine biosynthesis. ThiC participates in the formation of 4-Amino-5-hydroxymethyl-2-methylpyrimidine from AIR, an intermediate in the de novo pyrimidine biosynthesis. Thic is a member of the radical SAM superfamily.	0
CP027570.1\|AVO75458.1\|2361984_2362266_-\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	5.87148e-05
CP027570.1\|AVO75464.1\|2369002_2370034_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
CP027570.1\|AVO75462.1\|2367083_2368535_+\|amino-acid-permease	gnl\|CDD\|223903	COG0833, LysP, Amino acid transporters [Amino acid transport and metabolism].	0
CP027570.1\|AVO75473.1\|2382020_2383091_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	5.04451e-153
CP027570.1\|AVO75461.1\|2366605_2366875_-\|chorismate-mutase	gnl\|CDD\|376623	pfam01817, CM_2, Chorismate mutase type II. Chorismate mutase EC:5.4.99.5 catalyzes the conversion of chorismate to prephenate in the pathway of tyrosine and phenylalanine biosynthesis. This enzyme is negatively regulated by tyrosine, tryptophan and phenylalanine.	4.72484e-22
CP027570.1\|AVO75471.1\|2380421_2381201_-\|ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	6.17418e-77
CP027570.1\|AVO75472.1\|2381200_2382028_-\|ABC-transporter-permease	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	2.63649e-69

>CP027570.1|AVO75465.1|2370030_2370696_-|CRISPR-associated-protein-Cas4
MEYDEDDFLMISGIQHFSFCPRQWALIHIDQVWDENMKTMEGNIIHENCHNPDFIEKRGEILISRGIRIASRTLGVTGQCDVVEFHRDDGGGRLYGHNGLWLPFPIEYKRGKTKDINADRLQLCCQAMCLEEMLGVSIYQGALYYHETHRREPVELTEPLRQEVRKMLEMMHDYFKRGYIPKVRPKKGCPSCSLKEICLPVICKKKSAQPYYEAMLGSDDV
>CP027570.1|AVO75464.1|2369002_2370034_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MRKLLNTLYVMTPETYLALENDNIIILLDEKVLGKFPLHTLEQIVYFGYKGASPALMGECAKRNIGLCFYRPNGRFLARTVGTTQGNVLLRKEQYRCSDNEIRSCQIAKYFIVGKIFNSRSVLERAKRDHPMSFDIQSLKEISSSLLRLAKEARKCCDLDSLRGYEGEAASLYFSVFDHLILQNKKIFSFKQRMKRPPKDSVNALLSFCYTILANDCASALEAVGLDAYVGFLHRDRPGRISLALDLMEELRSIYADRFVLTLINNRKINASAFERQENGAVLLNDKGRKIFLTDWQNRKKDIIKHPFLDEKIPWGLVPFVQAQLLGKVLRGDLDVYPSFLWK
>CP027570.1|AVO75463.1|2368702_2368993_-|CRISPR-associated-endonuclease-Cas2
MLVLVTYDVSTEDDAGKRRLHQVAKQCEKYGQRVQNSVFECLLQPDELMLLKHQLIKIMDENKDSIRFYNLGKKYQSKIEHYGAKNTYDPEDVLIF
>CP027570.1|AVO75462.1|2367083_2368535_+|amino-acid-permease
MEETQQQQGLRRSLKARHMNMIAIGGAIGTGLFVAGGETVSSAGPGGALVAYALIGIMVYFLMTGLGEMASYLPVSGSFETYANRYVDKSLGFALGWNYWFNWAITVAAELVAGALIMKYWFPDVPAAIWSGLFLIILFVLNYLSTRSYGESEFIFAGIKVLTVLVFLFAGTLLILGLGPEPSPGFTNWTIGEAPFVGGFTAMLGIFMVAGFSFQGTEMIGIAAGESEDPEKNVPRAVHSIFWRILIFYLGAFTVIGFLIPYTDPNLLNTNIENISISPFTLVFERFGLAAAASIMNAVILTAVLSAGNSGLYVSTRMLYAMAETGQAPKCFLKLNKRGVPSYALFATVVFGLAAFLTSLIGEGKAYDWLVNISGMAGFITWIGIAICHFRFRRAYVAQGKDLKDLPYKATWFPFGPLLALIMCIIVTAGQNYSAFTGAEIDWYGASVAYIGIPVFLAVFFYHKIKHKTHLIPLKEVNLSRDK
>CP027570.1|AVO75461.1|2366605_2366875_-|chorismate-mutase
MDLEECRREIDVLDRDLTKILERRMQVVAEVAAYKKEHHMEIYDPRRERQVLDKIANLTVQKELSPYLRRIYQCIMDESKKYEREHMGL
>CP027570.1|AVO75460.1|2364443_2366609_-|ATP-dependent-RecD-like-DNA-helicase
MKMEQIVVRGIAERLLFEAPDSDYRVFRLHDEADDATYTVTGHGTKPLVGDRLEIKGHWVQHKRYGRQFAADGWSRIIPESVDGIERFLGSGAVKGLGPALAHRVVAAFGKDTMKILERDPQRLLEVEGIGPKKLAVITESFYEEKQVNDIAYDLEQHGVAGRYAGRLLQKYGDDVHYVLTEEPYRMIAEIDGIGFKTADQMALAYGMDRQDPQRLSAGLTYVLQTMTQNGHVCIPDAELVRRAAFILQADALGLHDILKEAIEVGQLCTADFQGTVYVYTPEAYEEENYIARRIQDMAAMKPLPMKTHVQLFLDRWQDSCHFELADKQREAVEKSLESGMTVITGGPGTGKTTVVQTIIRLAEQEGLRILLCAPTGRAAKRLAETTQRKAKTIHRLLIPDGRQGRIQVFEYNETKLLPADLVIVDEVSMLDMEMMYHLLSALKPQCRCILVGDADQLPSVGAGAVLHDIIASGQVPVVRLDTIFRQQEGGRIVTNAHLINSGRLPVVNEDPEFRFVEIEDEAQGAEKISALYNSELLETGDKFAVQVLSPMYKNPCGVDNLNQLIQGRFNPPAEGKGELKGKNVIFRVGDKVMQKHNDYEKGVFNGDIGEIFAIQKDMVYVRYPEQDVKYEGQEVDEITLAYAITVHKSQGSEYHTVIMVLVNSHAIMLQRNLFYTAVTRAKRKVILVGSKRAVQTAVQNQRTSRRFTLLIPRLQGELIV
>CP027570.1|AVO75459.1|2363783_2364431_-|amidophosphoribosyltransferase
MSLITHLFNLLYPPRCPACGALVARDGDWCPSCLAAVWHPRRINKPAAVRHLAACYCLADYRGAMRHILHDIKYNGKQGKCRACRVLLDRFPWPERFDRIDRVVPVPLAPEKLQRRGFNQAEALFRDWASVRWDWCDALQRLRPTKVQWQLCRDERKENVHDAFAVKETVPVQGKHILLVDDIFTTGATLEACAQALTKKGATSVTGLVIASGAP
>CP027570.1|AVO75647.1|2362749_2363094_-|hypothetical-protein
MSDEAIHKAVDAARTFLQNDAERLAYINRELAILDYNSDHRDAFEDGKAEGRKEGEAKGRKEGEAKGREEGQAIADERWSMLMQRLLGEQRYDDANKAAADASFREKLFKEYGI
>CP027570.1|AVO75458.1|2361984_2362266_-|transposase
MAKFNKEFKINAVKYYHEHRELGLVGCATNLGIAPQTLSRWQKQLKDNGEMPYRGSGNYASDEAKEIARLQRELRDAKDALNVLKKAISILDK
>CP027570.1|AVO75457.1|2361073_2361988_-|IS3-family-transposase
MTIAIYRSVQEEAENAHQAERRFSVSGVLSELDVSSSGYYDWAARKPSKQAQHRKEMKKKIQTIYDDSKQIYGAPKIAQVMQQNGDSISERTVGVYMRQMGIQACWVKHYTVTTRNSDFDVALVNILQECFNPEEPDQVWCSDITYIWTAEGFVYLESIMDLFSRKIIAWNLARNLDVAGIVKMLQEAKQCRKPGQLLVIHSDRGCQYVSQAYIRETSQMRRSYSKKGYPWDNACIESFHSLIKREWLNRFKIQNYQQAYLLVFEYINTFYNTVRIHSHCNYMSPDDYEKLYADFQKHNMRLGI
>CP027570.1|AVO75466.1|2374397_2375633_+|hypothetical-protein
MANISSIKAASLSMCFSVGAVLFSSHAGGGFATGNQENVYFVSLGWLGPITAIITMLLFTLTIKEAMNMYNSRHLTSYRQLFQNLYSPFKGIEYLFEAFFYIMVLMAVSATISGAASAINAQTGLNYYAGIGIVGTIIFFLTIFGAGLVRRATTYMGMAILAMVIMIFSVGIYMGGSIEGTQFFTAAMAQDFTTNGFSKVPTAILHAFTYSGFQCVVIPTMIVVGTPLVTRKNCATSMWFSFAMNAIALTLAVCMLLGWTGIYGKSPLPTLTSCKAMGMSWLTIAYSAFLLLCLISTGVTTVFGFTARFSETKCLKKISRNTVTRSAIVTLFIIIASMTVSVAGLTNIIKYGYGYCGYLAIAIIIVPFLTIGRYKNKRYAADSKYRARIDAMNENPEAAQAFQPTAEAAGH
>CP027570.1|AVO75467.1|2375876_2377178_-|phosphomethylpyrimidine-synthase-ThiC
MDYTTQMDAARKGIVTPQMKIVAEKEHMPVEKLMALVASGKVAIPANKVHTSLSPEAVGQDCRTKINVNLGVSPEHNNHEEELQKVQNAIDMKAEAIMDLSNFGKTREFRRKLVKMSTAMIGTVPMYDAVGMLEKDLKDITVDEFFSVVEQHAEDGVDFMTIHCGMNRKTAQRIKDNPRLTNVVSRGGSLLFAWMEMNNQENPFYEYYDRLLDICEKYDVTLSLGDACRPGCTHDATDAAQIEELITLGELTKRAWAHNVQVMIEGPGHMVLNEIAANMKIEKRLCHGAPFYVLGPLVTDIAPGYDHITSAIGGAIAASCGADFLCYVTPAEHLRLPTVDDVKEGIIAARIAAHAADLVKGIPGAQEWDDAMSKARVDVDFDKMISLSIDPEKARRYYESSKPECEGTCTMCGKMCPARTMKRILAGEDVSIR
>CP027570.1|AVO75468.1|2377508_2378231_+|DUF541-domain-containing-protein
MKYKPLKGLVVAAMLASSLVLAAPQSLAAGPEPSVVTVTGYAQQEVSPDTAYVTIGTTSTDADAQQARTKNNLAMNEVTNALKAMGIPAENMKTTGFYMSPNYDMKGQKVTSYTVSNNLEVKLTDLTMVSQVINKAGSLGANQINNVRFTNEHADQIKENLIKEAVHNGQRAAQAAAEAAGSQLGAVKEINISGTSPSYNRVYAAGMSLRAVKMEAADSTPVEAGTNTLSQSVNLTYYLQ
>CP027570.1|AVO75469.1|2378407_2379280_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MKEYTPFKSGKVREVYDAGDSIIMVATDRISAFDHILKNKITKKGAILTQMSKFWFDMTSDIIPNHMISVDNADMPEFFQQEQFVGNSMKCQKLTMIPMECIVRGYITGSGWESYQKDGTVCGIKLPAGLKESEKLPEPIFTPSTKAELGDHDENVSLEEGAAFIDKTFPGKGKEYAEKIRDYTLALYKKCAEYALSKGIIIADTKFEFGLDDKGNIVLGDEMLTPDSSRFWPLEGYKAGQSQPSYDKQFVRDWLKANPDSDYLLPQDVIDKTIAKYKEAYEMLTGKAFD
>CP027570.1|AVO75470.1|2379346_2380411_-|spermidine/putrescine-ABC-transporter-substrate-binding-protein
MKYIRLILLGLCCILALSGCGFWESEEDGDNVVYVYNWGDYVDPDTLKQFEEETGIRVVMDEFDTNESMYPLVAAGAERYDVICPSDYMIQKMIHNDLLQPLDYSQLPNARQYVGKQFWTQSESFDPGNRYAVPYCWGTVGIVYNRTMVDEPVDSWSILWKEKYKNDIIMQDSPRDSFMVALKRLGYSLNTTDPQQIQEAREMLIAQKPLVQAYGIDDVKDKLVSGEAAMGVVFSGEALRMILENRDLEYVIPKEGTNLWIDSWVIPKNAEHVENAHKFIDFMSRPDIALKNFEYLTYSTPNTAVPDMEEDEDYKDNPVVFPPEEAYAGQETYKYLGEEGDKRYNDEWIQVKVW
>CP027570.1|AVO75471.1|2380421_2381201_-|ABC-transporter-permease
MEKVKKLYVALVVLFLYAPIGVLVAQSFNASRYRGHWTGFTLQWYGELFQNEGILDALQNTVTIGLSSAAIATVLGLITCMALRGMGRKLRSVFLGVASMPLLNADIVTGISLMLLFLGMGLRLGYGSILMAHVVFNLPYVILCIMPQFLSLDRSCYDAARDLGATPFVAFRRVVLPELRPSLLAGFMLAFTMSADDFIITHFTKGAGIDTLPTKIYAELKLGIHPEMYALSTLVFVFVLVFAVLLIVNRKRLTLGRNW
>CP027570.1|AVO75472.1|2381200_2382028_-|ABC-transporter-permease
MINSAAIRNLFAAPFLIWAVLFIFCPVVAIAWYGLTDAQGAMTLANISLMTHWEYLKALELSIVLALISTVICLIVAYPLCLILTEKKRRKGSLLFLLFILPMWMNSLLTTMAWQTILEKNGILNQFLRLLSLPDMSLINTPAAIVIGMIYNFLPYMVLPLYVALSKINGNVIAAARDLGASSWQTFTKVILPLSLPGAISGITMVFIPSLTTFFISGLLGGNKILLIGNIVEQEFTMAYDWHLGSGLSLVLMVFIVVNMAVTAYFDRSEGQVKK
>CP027570.1|AVO75473.1|2382020_2383091_-|ABC-transporter-ATP-binding-protein
MEKELIHLEHVSKTYDGHKVLDGLDLAISENEFVTLLGPSGCGKTTTLRLIAGFETPDEGRILFEGADITQLPPNRRQVNTVFQNYSLFSHMDVAENIAFGPKIHGKSRDYIRDKIRYALKLVNLDGYEHANIVDLSGGQQQRVAIARAVVNEPRVLLLDEPLSALDRKLRRSMQLELIKIKEELGITFVFVTHDQEEALSMSDTVVVMNQGYIQQIGTPENIYNEPENAFVADFIGDSNIVDGLMVHDKLVRIADYDFDCVDVGFGTNRPVDVQIRPEDMELRPPQDGGFNGVVTKTIFEGMTYNLTIQARGIEWLVKSTKHYQPGAEVSLWVDPFNIQIMNKPESEDERAMEND
>CP027570.1|AVO75648.1|2383172_2383931_-|lytic-transglycosylase-domain-containing-protein
MAAFLLAVMALAPVQAITQEEMVYDQVSKYIRGSEAAAIAQDICDASYMYDVDPILVTAVFTTESHFDNSAVSGVGAVGIAQLMPATAASLNVNPYNRRENIFGGVKYLGQMVERYRTWDKPFVYAEAAYNAGPGAVDRARGVPHYTETMNYVQTVEQTRREIWRLAGHEAMAMQPYKRSAMTMQEKEAPIFPSLKEWHEQHSQKAAQVQAKSVGSTKPALVRTKAARVAPERPRPSYWTTSLPWGEGTRRK
>CP027570.1|AVO75474.1|2384108_2385851_-|adenine-deaminase
MTMTGNLLKRRIAVARGLEPGDVVLKDCRIVDVYTQTIRTGDIVVADGVIAGVGGPYEGREVIEAHGAYAAPGLIESHIHIESSYVSPEEFGRLVVPLGTTTVVADPHEIVNVCGLAGLRYMMEAAEKTALDIRFMVPSCVPATPFDHSGAVLEADDMKGPLADDRILGVGEFMNCPGILNGDDAVLDKLVAAYEAKKPIDGHSPGISGKDLQAYASARIRTDHECFTLDDVEARLQAGIYVMLRNGSACHDLPNLVKAVTPANLRRFLLCSDDLHPKTIFEKGHLNEHLRLCVAAGLSPEAAITMATLNAADCYHFDDRGALAPGKRADIVLFEDLKDFKALATFIGGRKVAEKGRYSLPFTRADYSAVGSSVCIAGFSEDKLVMHLTSDQVRTIDILPGGVVTEKGQASIRRDDRDDFIYDPQADIVKVAVVERHHGTGNVGLGLLRGYGLKRGAVAVSIAHDSHNIIVAGTNNGDMAAAVKALETQKGGMAIVLDGQVLAAIPLPIAGLMSDQPAAAVDAAMDELYAKAHHILGVSDEVDVIMTLCFMSLPVIPKLKLLDTGLFDVEAFDFVPVELD

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP027570_9	9.1\|1937936\|36\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1937936-1937971	36	CP027570.1	1256846-1256881	0	1.0
CP027570_9	9.2\|1938004\|36\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1938004-1938039	36	CP027570.1	1395185-1395220	0	1.0
CP027570_9	9.4\|1938138\|35\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1938138-1938172	35	CP027570.1	1270808-1270842	0	1.0
CP027570_9	9.6\|1938274\|35\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1938274-1938308	35	CP027570.1	1270808-1270842	0	1.0
CP027570_9	9.7\|1938341\|35\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1938341-1938375	35	CP027570.1	1163344-1163378	0	1.0
CP027570_9	9.8\|1938408\|35\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1938408-1938442	35	CP027570.1	1156145-1156179	0	1.0
CP027570_9	9.11\|1938610\|35\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1938610-1938644	35	CP027570.1	1401072-1401106	0	1.0
CP027570_9	9.12\|1938677\|36\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1938677-1938712	36	CP027570.1	1398279-1398314	0	1.0
CP027570_9	9.13\|1938745\|37\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1938745-1938781	37	CP027570.1	1455757-1455793	0	1.0
CP027570_9	9.15\|1938882\|35\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1938882-1938916	35	CP027570.1	1319684-1319718	0	1.0
CP027570_9	9.16\|1938949\|38\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1938949-1938986	38	CP027570.1	1435537-1435574	0	1.0
CP027570_9	9.19\|1939153\|36\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1939153-1939188	36	CP027570.1	1387120-1387155	0	1.0
CP027570_9	9.21\|1939289\|37\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1939289-1939325	37	CP027570.1	1285812-1285848	0	1.0
CP027570_9	9.22\|1939358\|36\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1939358-1939393	36	CP027570.1	1313460-1313495	0	1.0
CP027570_9	9.23\|1939426\|35\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1939426-1939460	35	CP027570.1	1357382-1357416	0	1.0
CP027570_9	9.25\|1939561\|34\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1939561-1939594	34	CP027570.1	1335174-1335207	0	1.0
CP027570_9	9.26\|1939627\|35\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1939627-1939661	35	CP027570.1	1198399-1198433	0	1.0
CP027570_9	9.27\|1939694\|36\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1939694-1939729	36	CP027570.1	1372006-1372041	0	1.0
CP027570_9	9.28\|1939762\|36\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1939762-1939797	36	CP027570.1	1410352-1410387	0	1.0
CP027570_9	9.29\|1939830\|33\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1939830-1939862	33	CP027570.1	1339195-1339227	0	1.0
CP027570_9	9.30\|1939895\|36\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1939895-1939930	36	CP027570.1	1376076-1376111	0	1.0
CP027570_9	9.31\|1939963\|36\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1939963-1939998	36	CP027570.1	724236-724271	0	1.0
CP027570_9	9.31\|1939963\|36\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1939963-1939998	36	CP027570.1	1209281-1209316	0	1.0
CP027570_9	9.32\|1940031\|38\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1940031-1940068	38	CP027570.1	57751-57788	0	1.0
CP027570_9	9.44\|1940848\|35\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1940848-1940882	35	CP027570.1	1490718-1490752	0	1.0
CP027570_13	13.11\|2371533\|34\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2371533-2371566	34	CP027570.1	1499089-1499122	0	1.0
CP027570_13	13.29\|2372740\|33\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2372740-2372772	33	CP027570.1	1455656-1455688	0	1.0
CP027570_13	13.30\|2372805\|34\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2372805-2372838	34	CP027570.1	1403607-1403640	0	1.0
CP027570_13	13.31\|2372871\|36\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2372871-2372906	36	CP027570.1	1445591-1445626	0	1.0
CP027570_13	13.32\|2372939\|36\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2372939-2372974	36	CP027570.1	1395662-1395697	0	1.0
CP027570_13	13.33\|2373007\|36\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2373007-2373042	36	CP027570.1	1404991-1405026	0	1.0
CP027570_13	13.34\|2373075\|35\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2373075-2373109	35	CP027570.1	1431029-1431063	0	1.0
CP027570_13	13.35\|2373142\|35\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2373142-2373176	35	CP027570.1	1329213-1329247	0	1.0
CP027570_13	13.36\|2373209\|36\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2373209-2373244	36	CP027570.1	1274753-1274788	0	1.0
CP027570_13	13.37\|2373277\|36\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2373277-2373312	36	CP027570.1	1239681-1239716	0	1.0
CP027570_13	13.38\|2373345\|35\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2373345-2373379	35	CP027570.1	1332250-1332284	0	1.0
CP027570_13	13.39\|2373412\|33\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2373412-2373444	33	CP027570.1	1312854-1312886	0	1.0
CP027570_13	13.9\|2371398\|35\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2371398-2371432	35	CP027570.1	1487042-1487076	1	0.971

1. spacer 9.1|1937936|36|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1256846-1256881, mismatch: 0, identity: 1.0

taaagttgtcttgattcttagtttatcatggatagg	CRISPR spacer
taaagttgtcttgattcttagtttatcatggatagg	Protospacer
************************************

2. spacer 9.2|1938004|36|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1395185-1395220, mismatch: 0, identity: 1.0

tatacatcaggaggctctaaattaaatgaaacgagc	CRISPR spacer
tatacatcaggaggctctaaattaaatgaaacgagc	Protospacer
************************************

3. spacer 9.4|1938138|35|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1270808-1270842, mismatch: 0, identity: 1.0

aatgaaaccgatgaaacggtcaacaagaagaccaa	CRISPR spacer
aatgaaaccgatgaaacggtcaacaagaagaccaa	Protospacer
***********************************

4. spacer 9.6|1938274|35|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1270808-1270842, mismatch: 0, identity: 1.0

aatgaaaccgatgaaacggtcaacaagaagaccaa	CRISPR spacer
aatgaaaccgatgaaacggtcaacaagaagaccaa	Protospacer
***********************************

5. spacer 9.7|1938341|35|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1163344-1163378, mismatch: 0, identity: 1.0

ccggcagaacatctcctgaccaacgacgatatgga	CRISPR spacer
ccggcagaacatctcctgaccaacgacgatatgga	Protospacer
***********************************

6. spacer 9.8|1938408|35|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1156145-1156179, mismatch: 0, identity: 1.0

accttcctcagcaaggaagaaatcgacgccctggc	CRISPR spacer
accttcctcagcaaggaagaaatcgacgccctggc	Protospacer
***********************************

7. spacer 9.11|1938610|35|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1401072-1401106, mismatch: 0, identity: 1.0

ctcatggcttgcgacaaggccctcgttgaaccgtc	CRISPR spacer
ctcatggcttgcgacaaggccctcgttgaaccgtc	Protospacer
***********************************

8. spacer 9.12|1938677|36|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1398279-1398314, mismatch: 0, identity: 1.0

tttgagccagaaagattatgcgtcgggacaaatggg	CRISPR spacer
tttgagccagaaagattatgcgtcgggacaaatggg	Protospacer
************************************

9. spacer 9.13|1938745|37|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1455757-1455793, mismatch: 0, identity: 1.0

ggcttatgcctgtgcccgcggtgctgaccgcatgagc	CRISPR spacer
ggcttatgcctgtgcccgcggtgctgaccgcatgagc	Protospacer
*************************************

10. spacer 9.15|1938882|35|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1319684-1319718, mismatch: 0, identity: 1.0

atatagaacatcctgaaagagatactttggtcatc	CRISPR spacer
atatagaacatcctgaaagagatactttggtcatc	Protospacer
***********************************

11. spacer 9.16|1938949|38|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1435537-1435574, mismatch: 0, identity: 1.0

gtgtattagttaacggtgccgatggccgcatgggcagc	CRISPR spacer
gtgtattagttaacggtgccgatggccgcatgggcagc	Protospacer
**************************************

12. spacer 9.19|1939153|36|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1387120-1387155, mismatch: 0, identity: 1.0

atcatcatggcgacaatcggcgtcctcgtcgtcctc	CRISPR spacer
atcatcatggcgacaatcggcgtcctcgtcgtcctc	Protospacer
************************************

13. spacer 9.21|1939289|37|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1285812-1285848, mismatch: 0, identity: 1.0

tgcatgtgtcccggtggcgtcgtcgtcggggcggctt	CRISPR spacer
tgcatgtgtcccggtggcgtcgtcgtcggggcggctt	Protospacer
*************************************

14. spacer 9.22|1939358|36|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1313460-1313495, mismatch: 0, identity: 1.0

tcgatttcaatcatacggggatgagcatcgtcgaaa	CRISPR spacer
tcgatttcaatcatacggggatgagcatcgtcgaaa	Protospacer
************************************

15. spacer 9.23|1939426|35|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1357382-1357416, mismatch: 0, identity: 1.0

gcatgatacgctggaaacgtatacggctgtcagtg	CRISPR spacer
gcatgatacgctggaaacgtatacggctgtcagtg	Protospacer
***********************************

16. spacer 9.25|1939561|34|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1335174-1335207, mismatch: 0, identity: 1.0

attttccttgtggacggcttcggctgtttcctgc	CRISPR spacer
attttccttgtggacggcttcggctgtttcctgc	Protospacer
**********************************

17. spacer 9.26|1939627|35|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1198399-1198433, mismatch: 0, identity: 1.0

agtaaaaaagaaatccggtcaaattttgtttacgg	CRISPR spacer
agtaaaaaagaaatccggtcaaattttgtttacgg	Protospacer
***********************************

18. spacer 9.27|1939694|36|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1372006-1372041, mismatch: 0, identity: 1.0

ccgatgccatctgcttcgtctcggaaaaggggcggg	CRISPR spacer
ccgatgccatctgcttcgtctcggaaaaggggcggg	Protospacer
************************************

19. spacer 9.28|1939762|36|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1410352-1410387, mismatch: 0, identity: 1.0

tatatacgcgtaaaacgtataaccaaagctatatca	CRISPR spacer
tatatacgcgtaaaacgtataaccaaagctatatca	Protospacer
************************************

20. spacer 9.29|1939830|33|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1339195-1339227, mismatch: 0, identity: 1.0

ccagaaggcagccgccgaagggaggtcagtcca	CRISPR spacer
ccagaaggcagccgccgaagggaggtcagtcca	Protospacer
*********************************

21. spacer 9.30|1939895|36|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1376076-1376111, mismatch: 0, identity: 1.0

ctgtcgatgaattgatcaaaacgttggaaaagctgt	CRISPR spacer
ctgtcgatgaattgatcaaaacgttggaaaagctgt	Protospacer
************************************

22. spacer 9.31|1939963|36|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 724236-724271, mismatch: 0, identity: 1.0

gacacggcgcacggatacgccggccaggtacatctc	CRISPR spacer
gacacggcgcacggatacgccggccaggtacatctc	Protospacer
************************************

23. spacer 9.31|1939963|36|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1209281-1209316, mismatch: 0, identity: 1.0

gacacggcgcacggatacgccggccaggtacatctc	CRISPR spacer
gacacggcgcacggatacgccggccaggtacatctc	Protospacer
************************************

24. spacer 9.32|1940031|38|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 57751-57788, mismatch: 0, identity: 1.0

tggccatcgctctgagcctgctgtgcaccggcctgggc	CRISPR spacer
tggccatcgctctgagcctgctgtgcaccggcctgggc	Protospacer
**************************************

25. spacer 9.44|1940848|35|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to position: 1490718-1490752, mismatch: 0, identity: 1.0

gtttttgcaatatacgtcgctatccctcctcgtca	CRISPR spacer
gtttttgcaatatacgtcgctatccctcctcgtca	Protospacer
***********************************

26. spacer 13.11|2371533|34|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to position: 1499089-1499122, mismatch: 0, identity: 1.0

cgggacgataccggcgtcttcctggatgagttcc	CRISPR spacer
cgggacgataccggcgtcttcctggatgagttcc	Protospacer
**********************************

27. spacer 13.29|2372740|33|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to position: 1455656-1455688, mismatch: 0, identity: 1.0

ggcgacggcggccccagccgggctgacgtgctt	CRISPR spacer
ggcgacggcggccccagccgggctgacgtgctt	Protospacer
*********************************

28. spacer 13.30|2372805|34|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to position: 1403607-1403640, mismatch: 0, identity: 1.0

cctgcgggccgacgtcgatgccctgcccattgag	CRISPR spacer
cctgcgggccgacgtcgatgccctgcccattgag	Protospacer
**********************************

29. spacer 13.31|2372871|36|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to position: 1445591-1445626, mismatch: 0, identity: 1.0

aagaccggcatgaacgtcgaccagatggacctcatc	CRISPR spacer
aagaccggcatgaacgtcgaccagatggacctcatc	Protospacer
************************************

30. spacer 13.32|2372939|36|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to position: 1395662-1395697, mismatch: 0, identity: 1.0

gcatattcaactccttggcccgcttcaccatatcgg	CRISPR spacer
gcatattcaactccttggcccgcttcaccatatcgg	Protospacer
************************************

31. spacer 13.33|2373007|36|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to position: 1404991-1405026, mismatch: 0, identity: 1.0

gcggcaggcccggaacaaccgcagggcatcttcctg	CRISPR spacer
gcggcaggcccggaacaaccgcagggcatcttcctg	Protospacer
************************************

32. spacer 13.34|2373075|35|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to position: 1431029-1431063, mismatch: 0, identity: 1.0

cttttcccggctctcagacaagccgcggctgacga	CRISPR spacer
cttttcccggctctcagacaagccgcggctgacga	Protospacer
***********************************

33. spacer 13.35|2373142|35|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to position: 1329213-1329247, mismatch: 0, identity: 1.0

ccaggaccagctggcctttcaaggatatatccagt	CRISPR spacer
ccaggaccagctggcctttcaaggatatatccagt	Protospacer
***********************************

34. spacer 13.36|2373209|36|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to position: 1274753-1274788, mismatch: 0, identity: 1.0

atgggcctgggcgccatcagctacggcatcaacttt	CRISPR spacer
atgggcctgggcgccatcagctacggcatcaacttt	Protospacer
************************************

35. spacer 13.37|2373277|36|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to position: 1239681-1239716, mismatch: 0, identity: 1.0

tggccgacgggacgtcttcaaagatatcgctttccg	CRISPR spacer
tggccgacgggacgtcttcaaagatatcgctttccg	Protospacer
************************************

36. spacer 13.38|2373345|35|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to position: 1332250-1332284, mismatch: 0, identity: 1.0

gcgttgatgtccgccaggggatactgggtatcttt	CRISPR spacer
gcgttgatgtccgccaggggatactgggtatcttt	Protospacer
***********************************

37. spacer 13.39|2373412|33|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to position: 1312854-1312886, mismatch: 0, identity: 1.0

gtagcagagggcggcatagcctgtaaggaacgg	CRISPR spacer
gtagcagagggcggcatagcctgtaaggaacgg	Protospacer
*********************************

38. spacer 13.9|2371398|35|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to position: 1487042-1487076, mismatch: 1, identity: 0.971

accgcaagtactcatgattgactgtgacccgcaag	CRISPR spacer
accgcaagtactcatgattgactgcgacccgcaag	Protospacer
************************.**********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP027570_11	11.2\|2183386\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2183386-2183417	32	NZ_CP014597	Yangia sp. CCB-MM3 plasmid unnamed1, complete sequence	308067-308098	5	0.844
CP027570_11	11.10\|2183867\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2183867-2183898	32	NC_047914	Faecalibacterium phage FP_Taranis, complete genome	18808-18839	6	0.812
CP027570_11	11.13\|2184047\|32\|CP027570\|CRISPRCasFinder,CRT	2184047-2184078	32	NZ_CP015009	Aminobacter aminovorans strain KCTC 2477 plasmid pAA04, complete sequence	2902-2933	6	0.812
CP027570_11	11.13\|2184047\|32\|CP027570\|CRISPRCasFinder,CRT	2184047-2184078	32	NZ_CP026759	Klebsiella aerogenes strain AR_0062 plasmid tig00000059_pilon, complete sequence	2508-2539	6	0.812
CP027570_11	11.13\|2184047\|32\|CP027570\|CRISPRCasFinder,CRT	2184047-2184078	32	NZ_CP030206	Salmonella enterica strain SA20083530 plasmid pSA20083530.3, complete sequence	3110-3141	6	0.812
CP027570_11	11.13\|2184047\|32\|CP027570\|CRISPRCasFinder,CRT	2184047-2184078	32	NZ_CP021854	Proteus mirabilis strain AR_0156 plasmid unitig_2, complete sequence	23999-24030	6	0.812
CP027570_11	11.13\|2184047\|32\|CP027570\|CRISPRCasFinder,CRT	2184047-2184078	32	NZ_CP032172	Klebsiella pneumoniae strain AR_0076 plasmid unnamed5, complete sequence	25022-25053	6	0.812
CP027570_11	11.13\|2184047\|32\|CP027570\|CRISPRCasFinder,CRT	2184047-2184078	32	NZ_CP021695	Proteus mirabilis strain AR_0155 plasmid tig00000123, complete sequence	107620-107651	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_KY494864	Pseudomonas aeruginosa strain FFUP_PS_37 plasmid pJB37, complete sequence	426004-426035	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_KT935446	Klebsiella pneumoniae strain Kp2964 plasmid 2964TF, complete sequence	60227-60258	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP010380	Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence	304947-304978	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	KP899803	Salmonella enterica strain 8025 plasmid p8025, complete sequence	101997-102028	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	CP009869	Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence	304671-304702	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP042479	Citrobacter freundii strain C50 plasmid pC50_001, complete sequence	93372-93403	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	CP049311	Salmonella enterica subsp. enterica serovar Heidelberg strain CVM N53023 plasmid pN53023, complete sequence	85882-85913	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP026208	Escherichia coli strain ECONIH5 plasmid pECO-109b, complete sequence	177327-177358	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP010360	Enterobacter roggenkampii strain 35734 plasmid p35734-141.404kb, complete sequence	43987-44018	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	CP049307	Salmonella enterica subsp. enterica serovar Heidelberg strain CVM N58631 plasmid p58631, complete sequence	274912-274943	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP012168	Enterobacter hormaechei subsp. steigerwaltii strain 34998 plasmid p34998-239.973kb, complete sequence	57854-57885	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP032179	Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence	198571-198602	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP029142	Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence	130715-130746	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP017294	Pseudomonas aeruginosa strain PA83 plasmid unnamed1, complete sequence	206670-206701	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP031575	Enterobacter hormaechei strain A1 plasmid pIncHI2-1502264, complete sequence	159000-159031	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP031135	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence	231986-232017	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP011635	Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence	137647-137678	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP027144	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 plasmid unnamed1, complete sequence	120265-120296	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	KY320277	Leclercia adecarboxylata strain Lec-476 plasmid pLec-476, complete sequence	87749-87780	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP044110	Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed1	43720-43751	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP044111	Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2	21383-21414	6	0.812
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP044111	Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2	490084-490115	6	0.812
CP027570_11	11.11\|2183927\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2183927-2183958	32	NZ_LR699074	Beijerinckiaceae bacterium RH AL1 isolate RH_AL1 plasmid 2	67142-67173	7	0.781
CP027570_11	11.13\|2184047\|32\|CP027570\|CRISPRCasFinder,CRT	2184047-2184078	32	NC_017536	Oligotropha carboxidovorans OM4 plasmid pHCG3B, complete sequence	131394-131425	7	0.781
CP027570_11	11.13\|2184047\|32\|CP027570\|CRISPRCasFinder,CRT	2184047-2184078	32	LR606148	Rhizobium sp. Q54 genome assembly, plasmid: 5	461461-461492	7	0.781
CP027570_11	11.13\|2184047\|32\|CP027570\|CRISPRCasFinder,CRT	2184047-2184078	32	NC_021209	Sinorhizobium sp. M14 plasmid pSinA, complete sequence	108113-108144	7	0.781
CP027570_11	11.13\|2184047\|32\|CP027570\|CRISPRCasFinder,CRT	2184047-2184078	32	NC_015689	Oligotropha carboxidovorans OM5 plasmid pHCG3, complete sequence	131396-131427	7	0.781
CP027570_12	12.17\|2188979\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2188979-2189010	32	NZ_CP026738	Bacillus megaterium strain YC4-R4 plasmid unnamed2	63503-63534	7	0.781
CP027570_12	12.21\|2189219\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189219-2189250	32	MK416013	Klebsiella phage ST16-OXA48phi5.1, complete genome	4112-4143	7	0.781
CP027570_9	9.10\|1938544\|34\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1938544-1938577	34	LC513943	Enterococcus phage vB_EfaS-DELF1 DNA, complete genome	27540-27573	8	0.765
CP027570_9	9.29\|1939830\|33\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1939830-1939862	33	NZ_CP050953	Rhodococcus sp. DMU1 plasmid unnamed	551063-551095	8	0.758
CP027570_11	11.11\|2183927\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2183927-2183958	32	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1288500-1288531	8	0.75
CP027570_11	11.13\|2184047\|32\|CP027570\|CRISPRCasFinder,CRT	2184047-2184078	32	NZ_CP039900	Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877b, complete sequence	156377-156408	8	0.75
CP027570_11	11.13\|2184047\|32\|CP027570\|CRISPRCasFinder,CRT	2184047-2184078	32	NZ_CP028971	Aminobacter sp. MSH1 plasmid pUSP3, complete sequence	32141-32172	8	0.75
CP027570_11	11.13\|2184047\|32\|CP027570\|CRISPRCasFinder,CRT	2184047-2184078	32	NZ_CP015008	Aminobacter aminovorans strain KCTC 2477 plasmid pAA03, complete sequence	141882-141913	8	0.75
CP027570_11	11.13\|2184047\|32\|CP027570\|CRISPRCasFinder,CRT	2184047-2184078	32	NZ_CP039891	Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499b, complete sequence	156377-156408	8	0.75
CP027570_12	12.12\|2188679\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2188679-2188710	32	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	641724-641755	8	0.75
CP027570_12	12.17\|2188979\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2188979-2189010	32	MN543579	Klebsiella pneumoniae strain PM48 plasmid pPM48_140, complete sequence	26411-26442	8	0.75
CP027570_12	12.17\|2188979\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2188979-2189010	32	MN543581	Klebsiella pneumoniae strain PM48TC plasmid pPM48TC_fusion, complete sequence	26411-26442	8	0.75
CP027570_12	12.17\|2188979\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2188979-2189010	32	LR134207	Klebsiella aerogenes strain NCTC9667 genome assembly, plasmid: 2	136597-136628	8	0.75
CP027570_12	12.17\|2188979\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2188979-2189010	32	NZ_CP031801	Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence	84831-84862	8	0.75
CP027570_13	13.11\|2371533\|34\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2371533-2371566	34	NZ_CP029358	Azospirillum sp. CFH 70021 plasmid unnamed3	100386-100419	8	0.765
CP027570_13	13.29\|2372740\|33\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2372740-2372772	33	NZ_CP017104	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872c, complete sequence	266484-266516	8	0.758
CP027570_13	13.29\|2372740\|33\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2372740-2372772	33	CP006879	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602b, complete sequence	250909-250941	8	0.758
CP027570_9	9.18\|1939087\|34\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1939087-1939120	34	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	266997-267030	9	0.735
CP027570_11	11.5\|2183566\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2183566-2183597	32	NZ_CP018230	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence	50521-50552	9	0.719
CP027570_11	11.5\|2183566\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2183566-2183597	32	NZ_CP016289	Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence	592317-592348	9	0.719
CP027570_11	11.5\|2183566\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2183566-2183597	32	NZ_CP030828	Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence	729092-729123	9	0.719
CP027570_11	11.9\|2183807\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2183807-2183838	32	KT221034	Streptomyces phage SF3, complete genome	46058-46089	9	0.719
CP027570_11	11.12\|2183987\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2183987-2184018	32	AP018706	Uncultured bacterium plasmid pSN0729-70 DNA, complete sequence	35417-35448	9	0.719
CP027570_11	11.12\|2183987\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2183987-2184018	32	NZ_CP033889	Lactobacillus plantarum strain LMT1-48 plasmid p_1, complete sequence	24861-24892	9	0.719
CP027570_12	12.6\|2188319\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2188319-2188350	32	MG945294	UNVERIFIED: Microviridae sp. isolate 1783-1801, partial genome	776-807	9	0.719
CP027570_12	12.11\|2188619\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2188619-2188650	32	KP869108	Escherichia coli O157 typing phage 10, complete genome	6211-6242	9	0.719
CP027570_12	12.11\|2188619\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2188619-2188650	32	KP869107	Escherichia coli O157 typing phage 9, partial genome	6335-6366	9	0.719
CP027570_12	12.11\|2188619\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2188619-2188650	32	NC_007804	Escherichia phage phiV10, complete genome	27611-27642	9	0.719
CP027570_12	12.11\|2188619\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2188619-2188650	32	KM389360	UNVERIFIED: Escherichia phage Phi05_1387 B clone contig00001 genomic sequence	6728-6759	9	0.719
CP027570_12	12.11\|2188619\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2188619-2188650	32	JQ011317	Escherichia phage TL-2011b, complete genome	876-907	9	0.719
CP027570_12	12.11\|2188619\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2188619-2188650	32	DQ126339	Enterobacteria phage phiV10, complete genome	27611-27642	9	0.719
CP027570_13	13.7\|2371262\|36\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2371262-2371297	36	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	699583-699618	9	0.75
CP027570_13	13.11\|2371533\|34\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2371533-2371566	34	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	189556-189589	9	0.735
CP027570_13	13.29\|2372740\|33\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2372740-2372772	33	NZ_CP045326	Mycobacterium sp. THAF192 plasmid pTHAF192_a, complete sequence	99319-99351	9	0.727
CP027570_13	13.29\|2372740\|33\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2372740-2372772	33	NZ_CP023779	Nocardia terpenica strain NC_YFY_NT001 plasmid p_NC_YFY_NT001, complete sequence	16103-16135	9	0.727
CP027570_13	13.29\|2372740\|33\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2372740-2372772	33	NZ_CP013053	Sinorhizobium americanum CCGM7 plasmid B, complete sequence	147984-148016	9	0.727
CP027570_13	13.30\|2372805\|34\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2372805-2372838	34	NZ_CP011274	Planctomyces sp. SH-PL62 plasmid pPL62-1, complete sequence	92440-92473	9	0.735
CP027570_13	13.30\|2372805\|34\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2372805-2372838	34	MN234192	Streptomyces phage Animus, complete genome	18529-18562	9	0.735
CP027570_13	13.30\|2372805\|34\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2372805-2372838	34	MF766047	Streptomyces phage SqueakyClean, complete genome	18455-18488	9	0.735
CP027570_13	13.30\|2372805\|34\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2372805-2372838	34	MK392366	Streptomyces phage Janus, complete genome	18529-18562	9	0.735
CP027570_13	13.39\|2373412\|33\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2373412-2373444	33	NC_014007	Sphingobium japonicum UT26S plasmid pCHQ1, complete sequence	161913-161945	9	0.727
CP027570_1	1.32\|154255\|36\|CP027570\|CRISPRCasFinder,CRT	154255-154290	36	MN693439	Marine virus AFVG_25M521, complete genome	1032-1067	10	0.722
CP027570_1	1.32\|154255\|36\|CP027570\|CRISPRCasFinder,CRT	154255-154290	36	MN693233	Marine virus AFVG_25M109, complete genome	770-805	10	0.722
CP027570_1	1.32\|154255\|36\|CP027570\|CRISPRCasFinder,CRT	154255-154290	36	MN693488	Marine virus AFVG_25M519, complete genome	36472-36507	10	0.722
CP027570_1	1.60\|154264\|36\|CP027570\|PILER-CR	154264-154299	36	MN693439	Marine virus AFVG_25M521, complete genome	1032-1067	10	0.722
CP027570_1	1.60\|154264\|36\|CP027570\|PILER-CR	154264-154299	36	MN693233	Marine virus AFVG_25M109, complete genome	770-805	10	0.722
CP027570_1	1.60\|154264\|36\|CP027570\|PILER-CR	154264-154299	36	MN693488	Marine virus AFVG_25M519, complete genome	36472-36507	10	0.722
CP027570_11	11.5\|2183566\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2183566-2183597	32	NZ_CP017941	Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence	571835-571866	10	0.688
CP027570_11	11.7\|2183686\|33\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2183686-2183718	33	NZ_CP012100	Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence	475438-475470	10	0.697
CP027570_11	11.11\|2183927\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2183927-2183958	32	NZ_CP006369	Aureimonas sp. AU20 plasmid pAU20b, complete sequence	236592-236623	10	0.688
CP027570_12	12.5\|2188259\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2188259-2188290	32	NZ_CP049906	Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence	143278-143309	10	0.688
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	467691-467722	10	0.688
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	97755-97786	10	0.688
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	554190-554221	10	0.688
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	599784-599815	10	0.688
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	539397-539428	10	0.688
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	539397-539428	10	0.688
CP027570_12	12.18\|2189039\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189039-2189070	32	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	497198-497229	10	0.688
CP027570_12	12.23\|2189339\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2189339-2189370	32	NZ_CP014601	Yangia sp. CCB-MM3 plasmid unnamed5, complete sequence	27661-27692	10	0.688
CP027570_1	1.32\|154255\|36\|CP027570\|CRISPRCasFinder,CRT	154255-154290	36	NZ_CP015177	Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence	33918-33953	11	0.694
CP027570_1	1.60\|154264\|36\|CP027570\|PILER-CR	154264-154299	36	NZ_CP015177	Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence	33918-33953	11	0.694
CP027570_11	11.11\|2183927\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2183927-2183958	32	NZ_CP017941	Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence	210073-210104	11	0.656
CP027570_12	12.16\|2188919\|32\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	2188919-2188950	32	NZ_CP034186	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence	198359-198390	11	0.656

1. spacer 11.2|2183386|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014597 (Yangia sp. CCB-MM3 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

agccgcaaaacgcgcccacaacgg-caaatagc	CRISPR spacer
agccgcaaagcgcgcccacaacgatcccatag-	Protospacer
*********.*************. *  ****

2. spacer 11.10|2183867|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NC_047914 (Faecalibacterium phage FP_Taranis, complete genome) position: , mismatch: 6, identity: 0.812

---ataggcaaaatcccagcccggtacatcgacat	CRISPR spacer
cagatcggc---atcccagcccgggacatccacat	Protospacer
   ** ***   ************ ***** ****

3. spacer 11.13|2184047|32|CP027570|CRISPRCasFinder,CRT matches to NZ_CP015009 (Aminobacter aminovorans strain KCTC 2477 plasmid pAA04, complete sequence) position: , mismatch: 6, identity: 0.812

tataccatgctgaaagcgtggaatacaggcca	CRISPR spacer
ctcacgttgctgaaagcgtggaataccggcca	Protospacer
. .**  ******************* *****

4. spacer 11.13|2184047|32|CP027570|CRISPRCasFinder,CRT matches to NZ_CP026759 (Klebsiella aerogenes strain AR_0062 plasmid tig00000059_pilon, complete sequence) position: , mismatch: 6, identity: 0.812

tataccatgctgaaagcgtggaatacaggcca	CRISPR spacer
ttatctatgctgaaagcatggaatacagggca	Protospacer
*   *.***********.*********** **

5. spacer 11.13|2184047|32|CP027570|CRISPRCasFinder,CRT matches to NZ_CP030206 (Salmonella enterica strain SA20083530 plasmid pSA20083530.3, complete sequence) position: , mismatch: 6, identity: 0.812

tataccatgctgaaagcgtggaatacaggcca	CRISPR spacer
ttatctatgctgaaagcatggaatacagggca	Protospacer
*   *.***********.*********** **

6. spacer 11.13|2184047|32|CP027570|CRISPRCasFinder,CRT matches to NZ_CP021854 (Proteus mirabilis strain AR_0156 plasmid unitig_2, complete sequence) position: , mismatch: 6, identity: 0.812

tataccatgctgaaagcgtggaatacaggcca	CRISPR spacer
ttatctatgctgaaagcatggaatacagggca	Protospacer
*   *.***********.*********** **

7. spacer 11.13|2184047|32|CP027570|CRISPRCasFinder,CRT matches to NZ_CP032172 (Klebsiella pneumoniae strain AR_0076 plasmid unnamed5, complete sequence) position: , mismatch: 6, identity: 0.812

tataccatgctgaaagcgtggaatacaggcca	CRISPR spacer
ttatctatgctgaaagcatggaatacagggca	Protospacer
*   *.***********.*********** **

8. spacer 11.13|2184047|32|CP027570|CRISPRCasFinder,CRT matches to NZ_CP021695 (Proteus mirabilis strain AR_0155 plasmid tig00000123, complete sequence) position: , mismatch: 6, identity: 0.812

tataccatgctgaaagcgtggaatacaggcca	CRISPR spacer
ttatctatgctgaaagcatggaatacagggca	Protospacer
*   *.***********.*********** **

9. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY494864 (Pseudomonas aeruginosa strain FFUP_PS_37 plasmid pJB37, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttccgaaacc	Protospacer
*******************.*** *.*.* *

10. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT935446 (Klebsiella pneumoniae strain Kp2964 plasmid 2964TF, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttccgaaacc	Protospacer
*******************.*** *.*.* *

11. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010380 (Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttccgaaacc	Protospacer
*******************.*** *.*.* *

12. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to KP899803 (Salmonella enterica strain 8025 plasmid p8025, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttcagaaacc	Protospacer
*******************.*** * *.* *

13. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to CP009869 (Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttcagaaacc	Protospacer
*******************.*** * *.* *

14. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042479 (Citrobacter freundii strain C50 plasmid pC50_001, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttccgaaacc	Protospacer
*******************.*** *.*.* *

15. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to CP049311 (Salmonella enterica subsp. enterica serovar Heidelberg strain CVM N53023 plasmid pN53023, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttccgaaacc	Protospacer
*******************.*** *.*.* *

16. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026208 (Escherichia coli strain ECONIH5 plasmid pECO-109b, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttccgaaacc	Protospacer
*******************.*** *.*.* *

17. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010360 (Enterobacter roggenkampii strain 35734 plasmid p35734-141.404kb, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttccgaaacc	Protospacer
*******************.*** *.*.* *

18. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to CP049307 (Salmonella enterica subsp. enterica serovar Heidelberg strain CVM N58631 plasmid p58631, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttccgaaacc	Protospacer
*******************.*** *.*.* *

19. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012168 (Enterobacter hormaechei subsp. steigerwaltii strain 34998 plasmid p34998-239.973kb, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttccgaaacc	Protospacer
*******************.*** *.*.* *

20. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032179 (Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttccgaaacc	Protospacer
*******************.*** *.*.* *

21. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029142 (Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttcagaaacc	Protospacer
*******************.*** * *.* *

22. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017294 (Pseudomonas aeruginosa strain PA83 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttccgaaacc	Protospacer
*******************.*** *.*.* *

23. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031575 (Enterobacter hormaechei strain A1 plasmid pIncHI2-1502264, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttcagaaacc	Protospacer
*******************.*** * *.* *

24. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031135 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttccgaaacc	Protospacer
*******************.*** *.*.* *

25. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011635 (Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttcagaaacc	Protospacer
*******************.*** * *.* *

26. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027144 (Enterobacter hormaechei subsp. hoffmannii strain AR_0365 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttcagaaacc	Protospacer
*******************.*** * *.* *

27. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to KY320277 (Leclercia adecarboxylata strain Lec-476 plasmid pLec-476, complete sequence) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttcagaaacc	Protospacer
*******************.*** * *.* *

28. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044110 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed1) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttcagaaacc	Protospacer
*******************.*** * *.* *

29. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044111 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttcagaaacc	Protospacer
*******************.*** * *.* *

30. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044111 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2) position: , mismatch: 6, identity: 0.812

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
acgaaaggacggcgaaaaggatttcagaaacc	Protospacer
*******************.*** * *.* *

31. spacer 11.11|2183927|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR699074 (Beijerinckiaceae bacterium RH AL1 isolate RH_AL1 plasmid 2) position: , mismatch: 7, identity: 0.781

-attattcgagccgccgccgacagcgatacgga	CRISPR spacer
cattg-tcgagccgccgccgaccgcgagaccat	Protospacer
 ***. **************** **** ** .

32. spacer 11.13|2184047|32|CP027570|CRISPRCasFinder,CRT matches to NC_017536 (Oligotropha carboxidovorans OM4 plasmid pHCG3B, complete sequence) position: , mismatch: 7, identity: 0.781

tataccatgctgaaagcgtggaatacaggcca	CRISPR spacer
ctcacgctgctaaaggcgtggaatacaggcca	Protospacer
. .**  ****.**.*****************

33. spacer 11.13|2184047|32|CP027570|CRISPRCasFinder,CRT matches to LR606148 (Rhizobium sp. Q54 genome assembly, plasmid: 5) position: , mismatch: 7, identity: 0.781

tataccatgctgaaagcgtggaatacaggcca	CRISPR spacer
ctgacgctgctgaaagcgtggaatacggggca	Protospacer
.  **  *******************.** **

34. spacer 11.13|2184047|32|CP027570|CRISPRCasFinder,CRT matches to NC_021209 (Sinorhizobium sp. M14 plasmid pSinA, complete sequence) position: , mismatch: 7, identity: 0.781

tataccatgctgaaagcgtggaatacaggcca	CRISPR spacer
ctaacgctgctgaaagcctggaatactggcca	Protospacer
.  **  ********** ******** *****

35. spacer 11.13|2184047|32|CP027570|CRISPRCasFinder,CRT matches to NC_015689 (Oligotropha carboxidovorans OM5 plasmid pHCG3, complete sequence) position: , mismatch: 7, identity: 0.781

tataccatgctgaaagcgtggaatacaggcca	CRISPR spacer
ctcacgctgctaaaggcgtggaatacaggcca	Protospacer
. .**  ****.**.*****************

36. spacer 12.17|2188979|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026738 (Bacillus megaterium strain YC4-R4 plasmid unnamed2) position: , mismatch: 7, identity: 0.781

tctatcgt-cataggaatgaatacagcaaaaat	CRISPR spacer
-ccattatacatagacatgaatacagcaaaaaa	Protospacer
 *.**..* *****. ****************

37. spacer 12.21|2189219|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to MK416013 (Klebsiella phage ST16-OXA48phi5.1, complete genome) position: , mismatch: 7, identity: 0.781

aattcgcaattaagcgtgagatggccacgacg	CRISPR spacer
atttcgccattaagcgtgagctggccagccgg	Protospacer
* ***** ************ ******    *

38. spacer 9.10|1938544|34|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to LC513943 (Enterococcus phage vB_EfaS-DELF1 DNA, complete genome) position: , mismatch: 8, identity: 0.765

ttataattacaacgcagaggagtaaggtgaccac-	CRISPR spacer
ttataattacaacgcagagta-ttatatgatttca	Protospacer
******************* * * * .***.. *

39. spacer 9.29|1939830|33|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050953 (Rhodococcus sp. DMU1 plasmid unnamed) position: , mismatch: 8, identity: 0.758

ccagaaggcagccgccgaagggaggtcagtcca	CRISPR spacer
gctgggggcagccgccgaattgaggtcagttcc	Protospacer
 * *..*************  *********.*

40. spacer 11.11|2183927|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 8, identity: 0.75

attatt--cgagccgccgccgacagcgatacgga	CRISPR spacer
--taccagcttgccgacgacgacagcgatacgga	Protospacer
  **..  *  **** ** ***************

41. spacer 11.13|2184047|32|CP027570|CRISPRCasFinder,CRT matches to NZ_CP039900 (Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877b, complete sequence) position: , mismatch: 8, identity: 0.75

tataccatgctgaaagcgtggaatacaggcca	CRISPR spacer
ctcacgctcctgaaagcctggaacacaggcca	Protospacer
. .**  * ******** *****.********

42. spacer 11.13|2184047|32|CP027570|CRISPRCasFinder,CRT matches to NZ_CP028971 (Aminobacter sp. MSH1 plasmid pUSP3, complete sequence) position: , mismatch: 8, identity: 0.75

tataccatgctgaaagcgtggaatacaggcca	CRISPR spacer
ctgacgctcctgaaggcgtggaataccggcca	Protospacer
.  **  * *****.*********** *****

43. spacer 11.13|2184047|32|CP027570|CRISPRCasFinder,CRT matches to NZ_CP015008 (Aminobacter aminovorans strain KCTC 2477 plasmid pAA03, complete sequence) position: , mismatch: 8, identity: 0.75

tataccatgctgaaagcgtggaatacaggcca	CRISPR spacer
ctgacgctcctaaaagcgtggaataccggcca	Protospacer
.  **  * **.************** *****

44. spacer 11.13|2184047|32|CP027570|CRISPRCasFinder,CRT matches to NZ_CP039891 (Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499b, complete sequence) position: , mismatch: 8, identity: 0.75

tataccatgctgaaagcgtggaatacaggcca	CRISPR spacer
ctcacgctcctgaaagcctggaacacaggcca	Protospacer
. .**  * ******** *****.********

45. spacer 12.12|2188679|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 8, identity: 0.75

tatggcggctgttaccgtcggcaggggtccaa	CRISPR spacer
aatggcggctgttagcgtccgcagtccgccca	Protospacer
 ************* **** ****    ** *

46. spacer 12.17|2188979|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to MN543579 (Klebsiella pneumoniae strain PM48 plasmid pPM48_140, complete sequence) position: , mismatch: 8, identity: 0.75

tctatcgt-cataggaatgaatacagcaaaaat	CRISPR spacer
-caacaataaatacaaatgaatacagcaaaaat	Protospacer
 * *. .*  *** .******************

47. spacer 12.17|2188979|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to MN543581 (Klebsiella pneumoniae strain PM48TC plasmid pPM48TC_fusion, complete sequence) position: , mismatch: 8, identity: 0.75

tctatcgt-cataggaatgaatacagcaaaaat	CRISPR spacer
-caacaataaatacaaatgaatacagcaaaaat	Protospacer
 * *. .*  *** .******************

48. spacer 12.17|2188979|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to LR134207 (Klebsiella aerogenes strain NCTC9667 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75

tctatcgt-cataggaatgaatacagcaaaaat	CRISPR spacer
-caacaataaatacaaatgaatacagcaaaaat	Protospacer
 * *. .*  *** .******************

49. spacer 12.17|2188979|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031801 (Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tctatcgt-cataggaatgaatacagcaaaaat	CRISPR spacer
-caacaataaatacaaatgaatacagcaaaaat	Protospacer
 * *. .*  *** .******************

50. spacer 13.11|2371533|34|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 8, identity: 0.765

cgggacgataccggcgtcttcctggatgagttcc---	CRISPR spacer
gtggacgatacccgcttcttcctg---gagttcgagg	Protospacer
  ********** ** ********   ******

51. spacer 13.29|2372740|33|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP017104 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872c, complete sequence) position: , mismatch: 8, identity: 0.758

ggcgacggcggccccagccgggctgacgtgctt	CRISPR spacer
ttcgacggcggcctctgccgggctgatgaactc	Protospacer
  ***********.* **********.* .**.

52. spacer 13.29|2372740|33|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to CP006879 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602b, complete sequence) position: , mismatch: 8, identity: 0.758

ggcgacggcggccccagccgggctgacgtgctt	CRISPR spacer
ctcgacggcggcctctgccgggctgatgaactc	Protospacer
  ***********.* **********.* .**.

53. spacer 9.18|1939087|34|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 9, identity: 0.735

ccggaagtcgtctactgtgccggcaagaccgtcc	CRISPR spacer
accgcattcgtctacggtgcgggcaagaccgaaa	Protospacer
 * * * ******** **** **********

54. spacer 11.5|2183566|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018230 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gacttttcggcgacattctttcggacattctt	CRISPR spacer
acctgttcggcgacattctttcggatctgggg	Protospacer
. ** ********************. *

55. spacer 11.5|2183566|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016289 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gacttttcggcgacattctttcggacattctt	CRISPR spacer
acctgttcggcgacattctttcggatctgggg	Protospacer
. ** ********************. *

56. spacer 11.5|2183566|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030828 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence) position: , mismatch: 9, identity: 0.719

gacttttcggcgacattctttcggacattctt	CRISPR spacer
tccttttcggcgacattctggcggacggcgat	Protospacer
  *****************  *****. .  *

57. spacer 11.9|2183807|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to KT221034 (Streptomyces phage SF3, complete genome) position: , mismatch: 9, identity: 0.719

ttattgggtgcgaagcctcgcggtgtacgcct	CRISPR spacer
ctcgacgatgcgaaggctcgcggtgtacaccg	Protospacer
.*    *.******* ************.**

58. spacer 11.12|2183987|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to AP018706 (Uncultured bacterium plasmid pSN0729-70 DNA, complete sequence) position: , mismatch: 9, identity: 0.719

cataactgtatcggttggtttgtctgttaatc	CRISPR spacer
ggtagctgtttcggttggtttgtcttcaaaat	Protospacer
 .**.**** *************** . ** .

59. spacer 11.12|2183987|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033889 (Lactobacillus plantarum strain LMT1-48 plasmid p_1, complete sequence) position: , mismatch: 9, identity: 0.719

cataactgtatcggttggtttgtctgttaatc	CRISPR spacer
tgcaactgtatcggttgggtggtctggatatt	Protospacer
...*************** * *****   **.

60. spacer 12.6|2188319|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to MG945294 (UNVERIFIED: Microviridae sp. isolate 1783-1801, partial genome) position: , mismatch: 9, identity: 0.719

aaagccggttgatttctcgagccgtgaaaggc	CRISPR spacer
ttattcgcttgatttctcgcgccgtgaaaaag	Protospacer
  * .** *********** *********..

61. spacer 12.11|2188619|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to KP869108 (Escherichia coli O157 typing phage 10, complete genome) position: , mismatch: 9, identity: 0.719

ttaaagtcggtgcttatcactatgactacagc	CRISPR spacer
ttaaagctggtgcttatcactatggttcgtaa	Protospacer
******..****************..*   .

62. spacer 12.11|2188619|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to KP869107 (Escherichia coli O157 typing phage 9, partial genome) position: , mismatch: 9, identity: 0.719

ttaaagtcggtgcttatcactatgactacagc	CRISPR spacer
ttaaagctggtgcttatcactatggttcgtaa	Protospacer
******..****************..*   .

63. spacer 12.11|2188619|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NC_007804 (Escherichia phage phiV10, complete genome) position: , mismatch: 9, identity: 0.719

ttaaagtcggtgcttatcactatgactacagc	CRISPR spacer
ttaaagctggtgcttatcactatggttcgtaa	Protospacer
******..****************..*   .

64. spacer 12.11|2188619|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to KM389360 (UNVERIFIED: Escherichia phage Phi05_1387 B clone contig00001 genomic sequence) position: , mismatch: 9, identity: 0.719

ttaaagtcggtgcttatcactatgactacagc	CRISPR spacer
ttaaagctggtgcttatcactatggttcgtaa	Protospacer
******..****************..*   .

65. spacer 12.11|2188619|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to JQ011317 (Escherichia phage TL-2011b, complete genome) position: , mismatch: 9, identity: 0.719

ttaaagtcggtgcttatcactatgactacagc	CRISPR spacer
ttaaagctggtgcttatcactatggttcgtaa	Protospacer
******..****************..*   .

66. spacer 12.11|2188619|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to DQ126339 (Enterobacteria phage phiV10, complete genome) position: , mismatch: 9, identity: 0.719

ttaaagtcggtgcttatcactatgactacagc	CRISPR spacer
ttaaagctggtgcttatcactatggttcgtaa	Protospacer
******..****************..*   .

67. spacer 13.7|2371262|36|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.75

gcagatggcgtcgagggcatctgcggccatgccgac	CRISPR spacer
accaagtgggtcgagggcatctgcggcgacgccgag	Protospacer
.* .*  * ****************** *.*****

68. spacer 13.11|2371533|34|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 9, identity: 0.735

cgggacgataccggcgtcttcctggatgagttcc	CRISPR spacer
cgacccgatacaggcggcttcctggatgagcgtg	Protospacer
**.  ****** **** *************. .

69. spacer 13.29|2372740|33|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP045326 (Mycobacterium sp. THAF192 plasmid pTHAF192_a, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgacggcggccccagccgggctgacgtgctt	CRISPR spacer
cttgacggcggccccaactgggctgacgacgct	Protospacer
  .*************.*.*********   .*

70. spacer 13.29|2372740|33|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP023779 (Nocardia terpenica strain NC_YFY_NT001 plasmid p_NC_YFY_NT001, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgacggcggccccagccgggctgacgtgctt	CRISPR spacer
gtcgacggcggtcccagccgggcggatcacccc	Protospacer
* *********.*********** **.   *..

71. spacer 13.29|2372740|33|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP013053 (Sinorhizobium americanum CCGM7 plasmid B, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgacggcggccccagccgggctgacgtgctt	CRISPR spacer
ttcgacggcggctccagtcgggctgataaactc	Protospacer
  **********.****.********.. .**.

72. spacer 13.30|2372805|34|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP011274 (Planctomyces sp. SH-PL62 plasmid pPL62-1, complete sequence) position: , mismatch: 9, identity: 0.735

cctgcgggccgacgtcgatgccctgcccattgag	CRISPR spacer
gctgcgggccgacgtggaggccctggagcgcgag	Protospacer
 ************** ** ******     .***

73. spacer 13.30|2372805|34|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to MN234192 (Streptomyces phage Animus, complete genome) position: , mismatch: 9, identity: 0.735

cctgcg-ggccgacgtcgatgccctgcccattgag	CRISPR spacer
-ggacgcggccgacgtcggggccctgcccatcacg	Protospacer
   .** ***********. ***********.. *

74. spacer 13.30|2372805|34|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to MF766047 (Streptomyces phage SqueakyClean, complete genome) position: , mismatch: 9, identity: 0.735

cctgcg-ggccgacgtcgatgccctgcccattgag	CRISPR spacer
-ggacgcggccgacgtcggggccctgcccatcacg	Protospacer
   .** ***********. ***********.. *

75. spacer 13.30|2372805|34|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to MK392366 (Streptomyces phage Janus, complete genome) position: , mismatch: 9, identity: 0.735

cctgcg-ggccgacgtcgatgccctgcccattgag	CRISPR spacer
-ggacgcggccgacgtcggggccctgcccatcacg	Protospacer
   .** ***********. ***********.. *

76. spacer 13.39|2373412|33|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to NC_014007 (Sphingobium japonicum UT26S plasmid pCHQ1, complete sequence) position: , mismatch: 9, identity: 0.727

gtagcagagggcggcatagcctgtaaggaacgg	CRISPR spacer
cctggcgttggcggcatagccggcaaggaacgg	Protospacer
 . *  *  ************ *.*********

77. spacer 1.32|154255|36|CP027570|CRISPRCasFinder,CRT matches to MN693439 (Marine virus AFVG_25M521, complete genome) position: , mismatch: 10, identity: 0.722

aaaatgcaaaaagcaaactagataaagaaggggcct	CRISPR spacer
aaaaagcacaaagcaaactagataaaattattgatt	Protospacer
**** *** *****************.  .  * .*

78. spacer 1.32|154255|36|CP027570|CRISPRCasFinder,CRT matches to MN693233 (Marine virus AFVG_25M109, complete genome) position: , mismatch: 10, identity: 0.722

aaaatgcaaaaagcaaactagataaagaaggggcct	CRISPR spacer
aaaaagcacaaagcaaactagataaaattattgatt	Protospacer
**** *** *****************.  .  * .*

79. spacer 1.32|154255|36|CP027570|CRISPRCasFinder,CRT matches to MN693488 (Marine virus AFVG_25M519, complete genome) position: , mismatch: 10, identity: 0.722

aaaatgcaaaaagcaaactagataaagaaggggcct	CRISPR spacer
aaaaagcacaaagcaaactagataaaattattgaat	Protospacer
**** *** *****************.  .  *  *

80. spacer 1.60|154264|36|CP027570|PILER-CR matches to MN693439 (Marine virus AFVG_25M521, complete genome) position: , mismatch: 10, identity: 0.722

aaaatgcaaaaagcaaactagataaagaaggggcct	CRISPR spacer
aaaaagcacaaagcaaactagataaaattattgatt	Protospacer
**** *** *****************.  .  * .*

81. spacer 1.60|154264|36|CP027570|PILER-CR matches to MN693233 (Marine virus AFVG_25M109, complete genome) position: , mismatch: 10, identity: 0.722

aaaatgcaaaaagcaaactagataaagaaggggcct	CRISPR spacer
aaaaagcacaaagcaaactagataaaattattgatt	Protospacer
**** *** *****************.  .  * .*

82. spacer 1.60|154264|36|CP027570|PILER-CR matches to MN693488 (Marine virus AFVG_25M519, complete genome) position: , mismatch: 10, identity: 0.722

aaaatgcaaaaagcaaactagataaagaaggggcct	CRISPR spacer
aaaaagcacaaagcaaactagataaaattattgaat	Protospacer
**** *** *****************.  .  *  *

83. spacer 11.5|2183566|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017941 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gacttttcggcgacattctttcggacattctt	CRISPR spacer
acctgttcggcgacatcctttcggatctgggg	Protospacer
. ** ***********.********. *

84. spacer 11.7|2183686|33|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 10, identity: 0.697

atgtagtacaaaggaaaacttaagagaaaacat	CRISPR spacer
ttaataagtaaaggacaacttaagagtaaacat	Protospacer
 *.  . ..****** ********** ******

85. spacer 11.11|2183927|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006369 (Aureimonas sp. AU20 plasmid pAU20b, complete sequence) position: , mismatch: 10, identity: 0.688

attattcgagccgccgccgacagcgatacgga	CRISPR spacer
cgccttcgcgccgccgccgaccgcgatcgaca	Protospacer
  . **** ************ *****  . *

86. spacer 12.5|2188259|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049906 (Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgcaaaggtccgcgggttctcgatagtagc	CRISPR spacer
agtgcaaaggtccatgggttctcgccgccaca	Protospacer
.************..********* .. .*

87. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 10, identity: 0.688

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
gttggaattcggcgagaagaattgctggatca	Protospacer
.. ..*.  ******.*************.**

88. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 10, identity: 0.688

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
gttggaattcggcgagaagaattgctggatca	Protospacer
.. ..*.  ******.*************.**

89. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 10, identity: 0.688

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
gttggaattcggcgagaagaattgctggatca	Protospacer
.. ..*.  ******.*************.**

90. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 10, identity: 0.688

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
gttggaattcggcgagaagaattgctggatca	Protospacer
.. ..*.  ******.*************.**

91. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 10, identity: 0.688

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
gttggaattcggcgagaagaattgctggatca	Protospacer
.. ..*.  ******.*************.**

92. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 10, identity: 0.688

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
gttggaattcggcgagaagaattgctggatca	Protospacer
.. ..*.  ******.*************.**

93. spacer 12.18|2189039|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 10, identity: 0.688

acgaaaggacggcgaaaagaattgctggacca	CRISPR spacer
gttggaattcggcgagaagaattgctggatca	Protospacer
.. ..*.  ******.*************.**

94. spacer 12.23|2189339|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014601 (Yangia sp. CCB-MM3 plasmid unnamed5, complete sequence) position: , mismatch: 10, identity: 0.688

tgcatgatgagcatggacttcataccgtaacc	CRISPR spacer
ccaaaagtgagcctggacttcataccggaaga	Protospacer
.  * ..***** ************** **

95. spacer 1.32|154255|36|CP027570|CRISPRCasFinder,CRT matches to NZ_CP015177 (Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence) position: , mismatch: 11, identity: 0.694

aaaatgcaaaaagcaaactagataaagaaggggcct	CRISPR spacer
ggtaaacaaaaagtaaaatagataaagaagggtaga	Protospacer
.. * .*******.*** **************

96. spacer 1.60|154264|36|CP027570|PILER-CR matches to NZ_CP015177 (Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence) position: , mismatch: 11, identity: 0.694

aaaatgcaaaaagcaaactagataaagaaggggcct	CRISPR spacer
ggtaaacaaaaagtaaaatagataaagaagggtaga	Protospacer
.. * .*******.*** **************

97. spacer 11.11|2183927|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017941 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

attattcgagccgccgccgacagcgatacgga	CRISPR spacer
gcagaggtcgccgccgccgccaacgatacgga	Protospacer
.. .     ********** **.*********

98. spacer 12.16|2188919|32|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034186 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.656

ataagcggttgattttctgccggctgaacgta	CRISPR spacer
ccgcccggttgactttctgccggttgaagcgg	Protospacer
 ..  *******.**********.****   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1462155 : 1503409

Faecalibacterium_phage(17.65%)

portal,terminase,capsid,protease,tRNA,integrase,tail

attL 1475871:1475886|attR 1492951:1492966

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVO74676.1\|1462155_1462893_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AVO74677.1\|1462889_1463462_+	RNA methyltransferase	NA	NA	NA	NA
AVO74678.1\|1463476_1464211_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AVO74679.1\|1464503_1464746_+	DUF1858 domain-containing protein	NA	NA	NA	NA
AVO74680.1\|1464771_1465365_+	hypothetical protein	NA	NA	NA	NA
AVO74681.1\|1465387_1465948_+	hemerythrin	NA	NA	NA	NA
AVO74682.1\|1466422_1466914_+	sel1 repeat family protein	NA	NA	NA	NA
AVO74683.1\|1467090_1468710_+	hypothetical protein	NA	NA	NA	NA
AVO74684.1\|1468862_1469141_+	hypothetical protein	NA	NA	NA	NA
AVO74685.1\|1469179_1470490_+	radical SAM protein	NA	NA	NA	NA
AVO74686.1\|1471441_1472122_+	EcsC family protein	NA	NA	NA	NA
AVO74687.1\|1472136_1472343_+	hypothetical protein	NA	NA	NA	NA
AVO74688.1\|1472365_1472728_+	hypothetical protein	NA	NA	NA	NA
AVO75609.1\|1472774_1473764_+	WYL domain-containing transcriptional regulator	NA	NA	NA	NA
AVO74689.1\|1475465_1476995_+	methylmalonyl-CoA carboxyltransferase	NA	NA	NA	NA
1475871:1475886	attL	NA	NA	NA	NA
AVO74690.1\|1477007_1477493_+	hypothetical protein	NA	NA	NA	NA
AVO74691.1\|1477528_1477936_+	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA
AVO74692.1\|1478311_1479388_-\|integrase	site-specific integrase	A0A2H4JCB7	uncultured_Caudovirales_phage	4.1e-42	33.5
AVO75610.1\|1479431_1479644_-	nuclease	NA	NA	NA	NA
AVO74693.1\|1479664_1480498_-	DNA damage-inducible protein D	A0A1W6JPJ7	Morganella_phage	2.0e-76	66.7
AVO74694.1\|1480712_1481267_-	hypothetical protein	Q4ZA70	Staphylococcus_virus	1.8e-17	30.4
AVO74695.1\|1481371_1482802_-	DUF4041 domain-containing protein	M1NRY5	Streptococcus_phage	1.5e-68	52.7
AVO74696.1\|1482838_1483453_-	XRE family transcriptional regulator	A0A139ZPI6	Marinitoga_camini_virus	3.1e-18	32.2
AVO74697.1\|1483628_1483829_+	XRE family transcriptional regulator	A0A1B0T6B2	Bacillus_phage	2.8e-05	45.6
AVO75611.1\|1483964_1484198_+	hypothetical protein	NA	NA	NA	NA
AVO74698.1\|1484197_1484452_+	hypothetical protein	NA	NA	NA	NA
AVO74699.1\|1484481_1484697_+	hypothetical protein	NA	NA	NA	NA
AVO74700.1\|1484696_1485233_+	XRE family transcriptional regulator	NA	NA	NA	NA
AVO74701.1\|1485484_1485745_+	hypothetical protein	NA	NA	NA	NA
AVO74702.1\|1485760_1486042_+	LysM domain-containing protein	NA	NA	NA	NA
AVO74703.1\|1486058_1486265_+	hypothetical protein	NA	NA	NA	NA
AVO74704.1\|1486266_1486542_+	hypothetical protein	NA	NA	NA	NA
AVO74705.1\|1486544_1486766_+	hypothetical protein	NA	NA	NA	NA
AVO74706.1\|1486919_1487663_+	ParA family protein	H7BUL8	unidentified_phage	5.9e-24	34.2
AVO74707.1\|1487659_1488754_+	hypothetical protein	NA	NA	NA	NA
AVO74708.1\|1488740_1489292_+	hypothetical protein	NA	NA	NA	NA
AVO74709.1\|1489304_1489742_+	hypothetical protein	NA	NA	NA	NA
AVO74710.1\|1489981_1490824_+	hypothetical protein	I2E8X7	Clostridium_phage	1.6e-28	32.0
AVO74711.1\|1491049_1491241_+	hypothetical protein	NA	NA	NA	NA
AVO74712.1\|1491250_1491445_+	hypothetical protein	NA	NA	NA	NA
AVO74713.1\|1491441_1491897_+	hypothetical protein	NA	NA	NA	NA
AVO74714.1\|1491893_1492337_+	hypothetical protein	NA	NA	NA	NA
AVO74715.1\|1492536_1492725_+	hypothetical protein	NA	NA	NA	NA
AVO74716.1\|1492857_1493376_+	hypothetical protein	A0A0C5AN04	Bacteriophage	1.7e-14	35.7
1492951:1492966	attR	NA	NA	NA	NA
AVO74717.1\|1493372_1495283_+\|terminase	terminase	A0A2K9V3X4	Faecalibacterium_phage	7.1e-138	43.1
AVO74718.1\|1495291_1495510_+	hypothetical protein	NA	NA	NA	NA
AVO74719.1\|1495522_1497115_+\|portal	phage portal protein	A0A2K9V452	Faecalibacterium_phage	1.2e-103	40.3
AVO74720.1\|1497104_1498175_+\|protease	Clp protease ClpP	A0A067ZG37	Vibrio_phage	7.5e-36	35.2
AVO74721.1\|1498174_1498510_+	hypothetical protein	NA	NA	NA	NA
AVO74722.1\|1498522_1499575_+\|capsid	phage capsid protein	A0A0K2FHW2	Achromobacter_phage	1.2e-06	24.9
AVO74723.1\|1499586_1499829_+	hypothetical protein	NA	NA	NA	NA
AVO74724.1\|1499825_1500152_+	hypothetical protein	A0A0C5AJ53	Bacteriophage	2.0e-08	35.6
AVO74725.1\|1500160_1500676_+	hypothetical protein	A0A067ZG41	Vibrio_phage	6.2e-12	33.3
AVO74726.1\|1500680_1501190_+	hypothetical protein	NA	NA	NA	NA
AVO74727.1\|1501182_1501419_+	hypothetical protein	NA	NA	NA	NA
AVO74728.1\|1501420_1502866_+\|tail	phage tail protein	A0A059WKP9	Vibrio_phage	8.1e-126	50.4
AVO74729.1\|1502878_1503409_+\|tail	phage tail protein	A0A2K9V323	Faecalibacterium_phage	2.3e-22	37.6

DBSCAN-SWA_2

1507455 : 1523236

Vibrio_phage(31.25%)

plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVO74731.1\|1507455_1507659_+\|tail	phage tail protein	A0A2K9V482	Faecalibacterium_phage	1.2e-11	50.0
AVO74732.1\|1507663_1508830_+	transcriptional regulator	A0A0C5AJ59	Bacteriophage	3.6e-44	32.0
AVO74733.1\|1508819_1509284_+\|plate	baseplate assembly protein	A0A067ZIM2	Vibrio_phage	3.0e-10	28.2
AVO74734.1\|1509292_1509763_+	hypothetical protein	A0A0C5AN08	Bacteriophage	7.1e-15	32.3
AVO74735.1\|1509773_1510088_+	hypothetical protein	A0A067ZJ13	Vibrio_phage	5.1e-17	46.1
AVO74736.1\|1510074_1511190_+\|plate	baseplate assembly protein	A0A0C5AEG2	Bacteriophage	7.4e-87	47.0
AVO74737.1\|1511186_1512494_+\|tail	phage tail protein I	A0A2K9V471	Faecalibacterium_phage	1.6e-19	38.7
AVO74738.1\|1512493_1514149_+	hypothetical protein	G3MAG1	Bacillus_virus	1.6e-05	22.4
AVO74739.1\|1514170_1514620_+	hypothetical protein	NA	NA	NA	NA
AVO74740.1\|1514625_1515696_+	hypothetical protein	Q8H9N0	Vibrio_phage	3.6e-62	38.7
AVO75612.1\|1515804_1516104_+	diversity-generating retroelement protein Avd	D4HTV8	Vibrio_phage	1.1e-18	46.3
AVO74741.1\|1516037_1516304_+	hypothetical protein	D4HTV9	Vibrio_phage	2.1e-08	74.4
AVO74742.1\|1516425_1517502_+	RNA-dependent DNA polymerase	A0A0N7AE80	Bacillus_phage	1.0e-104	52.4
AVO75613.1\|1517501_1517945_+	hypothetical protein	M9Q253	Clostridium_phage	1.6e-21	47.2
AVO74743.1\|1517941_1518511_+	N-acetylmuramoyl-L-alanine amidase	A0A142F1B8	Bacillus_phage	1.7e-15	37.1
AVO74744.1\|1518529_1518808_+	hypothetical protein	NA	NA	NA	NA
AVO74745.1\|1519117_1519837_-	hypothetical protein	H7BW64	unidentified_phage	2.2e-07	46.8
AVO74746.1\|1520006_1520204_+	hypothetical protein	NA	NA	NA	NA
AVO74747.1\|1520298_1520733_+	hypothetical protein	NA	NA	NA	NA
AVO74748.1\|1520814_1521003_+	hypothetical protein	NA	NA	NA	NA
AVO74749.1\|1521085_1521322_+	hypothetical protein	NA	NA	NA	NA
AVO75614.1\|1521778_1523236_+	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	9.5e-50	37.9

DBSCAN-SWA_3

1579020 : 1586230

Agrobacterium_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVO74806.1\|1579020_1579617_+	ATP-dependent Clp endopeptidase, proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	3.1e-55	57.7
AVO74807.1\|1579634_1580873_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.1e-143	61.5
AVO74808.1\|1580945_1583279_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	5.6e-177	43.4
AVO74809.1\|1583278_1583914_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
AVO74810.1\|1584110_1584482_+	thioredoxin	A0A2I2L415	Orpheovirus	2.1e-09	30.4
AVO74811.1\|1584518_1585445_+	glycosyltransferase	S5FKN0	Shigella_phage	9.6e-56	39.7
AVO74812.1\|1585486_1586230_+	hypothetical protein	A0A1S5SEZ8	Streptococcus_phage	9.5e-22	34.4

DBSCAN-SWA_4

1987743 : 1995530

uncultured_phage(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVO75144.1\|1987743_1988193_+	deoxyuridine 5'-triphosphate nucleotidohydrolase	S4U059	uncultured_phage	1.3e-29	44.8
AVO75145.1\|1988203_1988893_+	site-specific DNA-methyltransferase	A0A1C9C5F8	Heterosigma_akashiwo_virus	3.0e-14	26.2
AVO75146.1\|1988915_1989134_+	hypothetical protein	NA	NA	NA	NA
AVO75147.1\|1989137_1989344_+	hypothetical protein	H7BV51	unidentified_phage	1.2e-11	48.5
AVO75148.1\|1989537_1989840_+	DUF3310 domain-containing protein	W5R8R5	Staphylococcus_phage	5.0e-06	42.3
AVO75149.1\|1989844_1990342_+	hypothetical protein	NA	NA	NA	NA
AVO75150.1\|1990334_1990787_+	hypothetical protein	NA	NA	NA	NA
AVO75151.1\|1990792_1991332_+	hypothetical protein	NA	NA	NA	NA
AVO75152.1\|1991192_1991576_+	hypothetical protein	NA	NA	NA	NA
AVO75153.1\|1991575_1992193_+	hypothetical protein	A0A060AN10	Cronobacter_phage	3.5e-38	41.5
AVO75154.1\|1992466_1994200_+	hypothetical protein	Q332F0	Clostridium_botulinum_C_phage	3.2e-97	36.0
AVO75155.1\|1994615_1995530_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.5e-40	35.0

DBSCAN-SWA_5

2339508 : 2346567

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVO75437.1\|2339508_2340114_-	IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	2.0e-49	53.9
AVO75438.1\|2340133_2340748_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.7e-24	35.3
AVO75439.1\|2340740_2341805_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D8KLC2	Synechococcus_phage	9.3e-63	41.3
AVO75440.1\|2341785_2343213_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.9e-59	34.0
AVO75441.1\|2343257_2343752_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	6.5e-27	48.4
AVO75442.1\|2344035_2346567_+	exonuclease	S5M596	Bacillus_phage	1.1e-21	23.0

Anti-CRISPR protein detection

Acr_ID: CP027570.1|AVO74699.1|1484481_1484697_+|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

CP027570.1|AVO74699.1|1484481_1484697_+|hypothetical-protein

1484481_1484697_+

71 aa aa

1462155-1503409

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP027570_9	TypeI	9.44\|1940848\|35\|CP027570\|PILER-CR,CRISPRCasFinder,CRT	1940848-1940882	35	1490752-1490718	0
CP027570_13	Unclear	13.9\|2371398\|35\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2371398-2371432	35	1487042-1487076	1
CP027570_13	Unclear	13.11\|2371533\|34\|CP027570\|CRT,PILER-CR,CRISPRCasFinder	2371533-2371566	34	1499122-1499089	0

1. spacer 9.44|1940848|35|CP027570|PILER-CR,CRISPRCasFinder,CRT matches to CP027570 position: 1490752-1490718, mismatch: 0

gtttttgcaatatacgtcgctatccctcctcgtca	CRISPR spacer
gtttttgcaatatacgtcgctatccctcctcgtca	Protospacer
***********************************

2. spacer 13.9|2371398|35|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to CP027570 position: 1487042-1487076, mismatch: 1

accgcaagtactcatgattgactgtgacccgcaag	CRISPR spacer
accgcaagtactcatgattgactgcgacccgcaag	Protospacer
************************.**********

3. spacer 13.11|2371533|34|CP027570|CRT,PILER-CR,CRISPRCasFinder matches to CP027570 position: 1499122-1499089, mismatch: 0

cgggacgataccggcgtcttcctggatgagttcc	CRISPR spacer
cgggacgataccggcgtcttcctggatgagttcc	Protospacer
**********************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP027570

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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