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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP020354 Staphylococcus aureus strain FORC59 chromosome, complete genome 7 crisprs cas3,DEDDh,DinG,csa3,WYL 11 3 9 0
CP020355 Staphylococcus aureus strain FORC59 plasmid pFORC59, complete sequence 0 crisprs csa3 0 0 1 0

Results visualization

1. CP020354
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020354_1 261523-261711 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020354_2 1090788-1090879 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020354_3 1109793-1110036 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020354_4 1199711-1199796 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020354_6 1989978-1990066 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020354_7 2117791-2117880 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020354_8 2231242-2231441 Orphan NA
3 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP020354_1 1.2|261601|32|CP020354|CRT 261601-261632 32 CP020354.1 143123-143154 0 1.0
CP020354_1 1.2|261601|32|CP020354|CRT 261601-261632 32 CP020354.1 143181-143212 0 1.0
CP020354_1 1.2|261601|32|CP020354|CRT 261601-261632 32 CP020354.1 143239-143270 0 1.0
CP020354_1 1.2|261601|32|CP020354|CRT 261601-261632 32 CP020354.1 1325149-1325180 0 1.0
CP020354_1 1.2|261601|32|CP020354|CRT 261601-261632 32 CP020354.1 1413651-1413682 0 1.0
CP020354_1 1.2|261601|32|CP020354|CRT 261601-261632 32 CP020354.1 1413709-1413740 0 1.0
CP020354_1 1.2|261601|32|CP020354|CRT 261601-261632 32 CP020354.1 1914791-1914822 0 1.0
CP020354_1 1.2|261601|32|CP020354|CRT 261601-261632 32 CP020354.1 2265581-2265612 0 1.0
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 CP020354.1 1113851-1113880 0 1.0
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 CP020354.1 1113963-1113992 0 1.0
CP020354_1 1.1|261546|32|CP020354|CRT 261546-261577 32 CP020354.1 811665-811696 1 0.969
CP020354_1 1.2|261601|32|CP020354|CRT 261601-261632 32 CP020354.1 261712-261743 1 0.969
CP020354_1 1.2|261601|32|CP020354|CRT 261601-261632 32 CP020354.1 804519-804550 1 0.969
CP020354_1 1.2|261601|32|CP020354|CRT 261601-261632 32 CP020354.1 916869-916900 1 0.969
CP020354_1 1.2|261601|32|CP020354|CRT 261601-261632 32 CP020354.1 1626514-1626545 1 0.969
CP020354_3 3.4|1109981|37|CP020354|CRT 1109981-1110017 37 CP020354.1 1997221-1997257 1 0.973
CP020354_8 8.1|2231271|27|CP020354|CRT 2231271-2231297 27 CP020354.1 2231215-2231241 1 0.963
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 CP020354.1 1771626-1771655 1 0.967
CP020354_8 8.3|2231386|27|CP020354|CRT 2231386-2231412 27 CP020354.1 811609-811635 1 0.963
CP020354_9 9.2|2660187|31|CP020354|CRISPRCasFinder 2660187-2660217 31 CP020354.1 811665-811695 1 0.968
CP020354_1 1.1|261546|32|CP020354|CRT 261546-261577 32 CP020354.1 811609-811640 2 0.938
CP020354_1 1.1|261546|32|CP020354|CRT 261546-261577 32 CP020354.1 896154-896185 2 0.938
CP020354_1 1.1|261546|32|CP020354|CRT 261546-261577 32 CP020354.1 1606843-1606874 2 0.938
CP020354_1 1.3|261656|33|CP020354|CRT 261656-261688 33 CP020354.1 1606842-1606874 2 0.939
CP020354_3 3.1|1109812|37|CP020354|CRT 1109812-1109848 37 CP020354.1 1997221-1997257 2 0.946
CP020354_3 3.4|1109981|37|CP020354|CRT 1109981-1110017 37 CP020354.1 2265687-2265723 2 0.946
CP020354_4 4.1|1199741|26|CP020354|CRISPRCasFinder 1199741-1199766 26 CP020354.1 767333-767358 2 0.923
CP020354_4 4.1|1199741|26|CP020354|CRISPRCasFinder 1199741-1199766 26 CP020354.1 767389-767414 2 0.923
CP020354_4 4.1|1199741|26|CP020354|CRISPRCasFinder 1199741-1199766 26 CP020354.1 767445-767470 2 0.923
CP020354_4 4.1|1199741|26|CP020354|CRISPRCasFinder 1199741-1199766 26 CP020354.1 811629-811654 2 0.923
CP020354_4 4.1|1199741|26|CP020354|CRISPRCasFinder 1199741-1199766 26 CP020354.1 896140-896165 2 0.923
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 CP020354.1 143129-143158 2 0.933
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 CP020354.1 143187-143216 2 0.933
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 CP020354.1 143245-143274 2 0.933
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 CP020354.1 916865-916894 2 0.933
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 CP020354.1 1592310-1592339 2 0.933
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 CP020354.1 1924137-1924166 2 0.933
CP020354_8 8.3|2231386|27|CP020354|CRT 2231386-2231412 27 CP020354.1 811665-811691 2 0.926
CP020354_8 8.3|2231386|27|CP020354|CRT 2231386-2231412 27 CP020354.1 896159-896185 2 0.926
CP020354_8 8.3|2231386|27|CP020354|CRT 2231386-2231412 27 CP020354.1 1012851-1012877 2 0.926
CP020354_8 8.3|2231386|27|CP020354|CRT 2231386-2231412 27 CP020354.1 1113907-1113933 2 0.926
CP020354_8 8.3|2231386|27|CP020354|CRT 2231386-2231412 27 CP020354.1 1199704-1199730 2 0.926
CP020354_8 8.3|2231386|27|CP020354|CRT 2231386-2231412 27 CP020354.1 1325213-1325239 2 0.926
CP020354_8 8.3|2231386|27|CP020354|CRT 2231386-2231412 27 CP020354.1 2265645-2265671 2 0.926
CP020354_9 9.1|2660132|30|CP020354|CRISPRCasFinder 2660132-2660161 30 CP020354.1 757927-757956 2 0.933
CP020354_9 9.1|2660132|30|CP020354|CRISPRCasFinder 2660132-2660161 30 CP020354.1 804460-804489 2 0.933
CP020354_9 9.1|2660132|30|CP020354|CRISPRCasFinder 2660132-2660161 30 CP020354.1 847631-847660 2 0.933
CP020354_9 9.1|2660132|30|CP020354|CRISPRCasFinder 2660132-2660161 30 CP020354.1 1039240-1039269 2 0.933
CP020354_9 9.1|2660132|30|CP020354|CRISPRCasFinder 2660132-2660161 30 CP020354.1 1413534-1413563 2 0.933
CP020354_9 9.1|2660132|30|CP020354|CRISPRCasFinder 2660132-2660161 30 CP020354.1 1914849-1914878 2 0.933
CP020354_9 9.1|2660132|30|CP020354|CRISPRCasFinder 2660132-2660161 30 CP020354.1 2073263-2073292 2 0.933
CP020354_9 9.1|2660132|30|CP020354|CRISPRCasFinder 2660132-2660161 30 CP020354.1 2265698-2265727 2 0.933
CP020354_9 9.1|2660132|30|CP020354|CRISPRCasFinder 2660132-2660161 30 CP020354.1 2660243-2660272 2 0.933
CP020354_9 9.2|2660187|31|CP020354|CRISPRCasFinder 2660187-2660217 31 CP020354.1 811609-811639 2 0.935
CP020354_9 9.2|2660187|31|CP020354|CRISPRCasFinder 2660187-2660217 31 CP020354.1 896155-896185 2 0.935
CP020354_9 9.2|2660187|31|CP020354|CRISPRCasFinder 2660187-2660217 31 CP020354.1 1606844-1606874 2 0.935

1. spacer 1.2|261601|32|CP020354|CRT matches to position: 143123-143154, mismatch: 0, identity: 1.0

cagagaatttcgaaaagaaattctacaggcaa	CRISPR spacer
cagagaatttcgaaaagaaattctacaggcaa	Protospacer
********************************

2. spacer 1.2|261601|32|CP020354|CRT matches to position: 143181-143212, mismatch: 0, identity: 1.0

cagagaatttcgaaaagaaattctacaggcaa	CRISPR spacer
cagagaatttcgaaaagaaattctacaggcaa	Protospacer
********************************

3. spacer 1.2|261601|32|CP020354|CRT matches to position: 143239-143270, mismatch: 0, identity: 1.0

cagagaatttcgaaaagaaattctacaggcaa	CRISPR spacer
cagagaatttcgaaaagaaattctacaggcaa	Protospacer
********************************

4. spacer 1.2|261601|32|CP020354|CRT matches to position: 1325149-1325180, mismatch: 0, identity: 1.0

cagagaatttcgaaaagaaattctacaggcaa	CRISPR spacer
cagagaatttcgaaaagaaattctacaggcaa	Protospacer
********************************

5. spacer 1.2|261601|32|CP020354|CRT matches to position: 1413651-1413682, mismatch: 0, identity: 1.0

cagagaatttcgaaaagaaattctacaggcaa	CRISPR spacer
cagagaatttcgaaaagaaattctacaggcaa	Protospacer
********************************

6. spacer 1.2|261601|32|CP020354|CRT matches to position: 1413709-1413740, mismatch: 0, identity: 1.0

cagagaatttcgaaaagaaattctacaggcaa	CRISPR spacer
cagagaatttcgaaaagaaattctacaggcaa	Protospacer
********************************

7. spacer 1.2|261601|32|CP020354|CRT matches to position: 1914791-1914822, mismatch: 0, identity: 1.0

cagagaatttcgaaaagaaattctacaggcaa	CRISPR spacer
cagagaatttcgaaaagaaattctacaggcaa	Protospacer
********************************

8. spacer 1.2|261601|32|CP020354|CRT matches to position: 2265581-2265612, mismatch: 0, identity: 1.0

cagagaatttcgaaaagaaattctacaggcaa	CRISPR spacer
cagagaatttcgaaaagaaattctacaggcaa	Protospacer
********************************

9. spacer 8.2|2231327|30|CP020354|CRT matches to position: 1113851-1113880, mismatch: 0, identity: 1.0

tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
tgcattgtctgtagaatttctttttgaaat	Protospacer
******************************

10. spacer 8.2|2231327|30|CP020354|CRT matches to position: 1113963-1113992, mismatch: 0, identity: 1.0

tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
tgcattgtctgtagaatttctttttgaaat	Protospacer
******************************

11. spacer 1.1|261546|32|CP020354|CRT matches to position: 811665-811696, mismatch: 1, identity: 0.969

agaagctggcggaaagtcagcatacaataatg	CRISPR spacer
agaagctggcggaaagtcagcttacaataatg	Protospacer
********************* **********

12. spacer 1.2|261601|32|CP020354|CRT matches to position: 261712-261743, mismatch: 1, identity: 0.969

cagagaatttcgaaaagaaattctacaggcaa	CRISPR spacer
cagagaatttcgaaaagaaattctacaggtaa	Protospacer
*****************************.**

13. spacer 1.2|261601|32|CP020354|CRT matches to position: 804519-804550, mismatch: 1, identity: 0.969

cagagaatttcgaaaagaaattctacaggcaa	CRISPR spacer
cagagaatttcgaaaagaaattctacagacaa	Protospacer
****************************.***

14. spacer 1.2|261601|32|CP020354|CRT matches to position: 916869-916900, mismatch: 1, identity: 0.969

cagagaatttcgaaaagaaattctacaggcaa	CRISPR spacer
cagagaatttctaaaagaaattctacaggcaa	Protospacer
*********** ********************

15. spacer 1.2|261601|32|CP020354|CRT matches to position: 1626514-1626545, mismatch: 1, identity: 0.969

cagagaatttcgaaaagaaattctacaggcaa	CRISPR spacer
cagagaatttcgtaaagaaattctacaggcaa	Protospacer
************ *******************

16. spacer 3.4|1109981|37|CP020354|CRT matches to position: 1997221-1997257, mismatch: 1, identity: 0.973

ccccaacatagagaaattggaaccccaatttctacag	CRISPR spacer
ccccaacatagagaaattggaacaccaatttctacag	Protospacer
*********************** *************

17. spacer 8.1|2231271|27|CP020354|CRT matches to position: 2231215-2231241, mismatch: 1, identity: 0.963

cattattgtatgctgacttttcgtcac	CRISPR spacer
cattattgtaagctgacttttcgtcac	Protospacer
********** ****************

18. spacer 8.2|2231327|30|CP020354|CRT matches to position: 1771626-1771655, mismatch: 1, identity: 0.967

tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
tgcattgtctgtagaatttcttttcgaaat	Protospacer
************************.*****

19. spacer 8.3|2231386|27|CP020354|CRT matches to position: 811609-811635, mismatch: 1, identity: 0.963

cattattgtaagctgactttctgtcag	CRISPR spacer
cattattgtaagctgactttccgtcag	Protospacer
*********************.*****

20. spacer 9.2|2660187|31|CP020354|CRISPRCasFinder matches to position: 811665-811695, mismatch: 1, identity: 0.968

cattattgtaggctgactttccgccagcttc	CRISPR spacer
cattattgtaagctgactttccgccagcttc	Protospacer
**********.********************

21. spacer 1.1|261546|32|CP020354|CRT matches to position: 811609-811640, mismatch: 2, identity: 0.938

agaagctggcggaaagtcagcatacaataatg	CRISPR spacer
agaagctgacggaaagtcagcttacaataatg	Protospacer
********.************ **********

22. spacer 1.1|261546|32|CP020354|CRT matches to position: 896154-896185, mismatch: 2, identity: 0.938

agaagctggcggaaagtcagcatacaataatg	CRISPR spacer
agaggctggcggaaagtcagcttacaataatg	Protospacer
***.***************** **********

23. spacer 1.1|261546|32|CP020354|CRT matches to position: 1606843-1606874, mismatch: 2, identity: 0.938

agaagctggcggaaagtcagcatacaataatg	CRISPR spacer
agaagctggcggaaagtcagcttacgataatg	Protospacer
********************* ***.******

24. spacer 1.3|261656|33|CP020354|CRT matches to position: 1606842-1606874, mismatch: 2, identity: 0.939

tagaagctggcggaaagtcagcatacaataatg	CRISPR spacer
tagaagctggcggaaagtcagcttacgataatg	Protospacer
********************** ***.******

25. spacer 3.1|1109812|37|CP020354|CRT matches to position: 1997221-1997257, mismatch: 2, identity: 0.946

ccccaacatagagaaattggatcaccaatttcaacag	CRISPR spacer
ccccaacatagagaaattggaacaccaatttctacag	Protospacer
********************* ********** ****

26. spacer 3.4|1109981|37|CP020354|CRT matches to position: 2265687-2265723, mismatch: 2, identity: 0.946

ccccaacatagagaaattggaaccccaatttctacag	CRISPR spacer
ccccaacatagagaaattggattcccaatttctacag	Protospacer
********************* .**************

27. spacer 4.1|1199741|26|CP020354|CRISPRCasFinder matches to position: 767333-767358, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaagcaggcgg	Protospacer
*************.****** *****

28. spacer 4.1|1199741|26|CP020354|CRISPRCasFinder matches to position: 767389-767414, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacatagaagcagacgg	Protospacer
******************** *.***

29. spacer 4.1|1199741|26|CP020354|CRISPRCasFinder matches to position: 767445-767470, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacataaaagcaggcgg	Protospacer
***************.**** *****

30. spacer 4.1|1199741|26|CP020354|CRISPRCasFinder matches to position: 811629-811654, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaagctgacgg	Protospacer
*************.********.***

31. spacer 4.1|1199741|26|CP020354|CRISPRCasFinder matches to position: 896140-896165, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaggctggcgg	Protospacer
*************.***.********

32. spacer 8.2|2231327|30|CP020354|CRT matches to position: 143129-143158, mismatch: 2, identity: 0.933

tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaat	Protospacer
*******.****************.*****

33. spacer 8.2|2231327|30|CP020354|CRT matches to position: 143187-143216, mismatch: 2, identity: 0.933

tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaat	Protospacer
*******.****************.*****

34. spacer 8.2|2231327|30|CP020354|CRT matches to position: 143245-143274, mismatch: 2, identity: 0.933

tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaat	Protospacer
*******.****************.*****

35. spacer 8.2|2231327|30|CP020354|CRT matches to position: 916865-916894, mismatch: 2, identity: 0.933

tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
tgcattgcctgtagaatttcttttagaaat	Protospacer
*******.**************** *****

36. spacer 8.2|2231327|30|CP020354|CRT matches to position: 1592310-1592339, mismatch: 2, identity: 0.933

tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaat	Protospacer
*******.****************.*****

37. spacer 8.2|2231327|30|CP020354|CRT matches to position: 1924137-1924166, mismatch: 2, identity: 0.933

tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
tgcattgtctgtagaatttcctttcgaaat	Protospacer
********************.***.*****

38. spacer 8.3|2231386|27|CP020354|CRT matches to position: 811665-811691, mismatch: 2, identity: 0.926

cattattgtaagctgactttctgtcag	CRISPR spacer
cattattgtaagctgactttccgccag	Protospacer
*********************.*.***

39. spacer 8.3|2231386|27|CP020354|CRT matches to position: 896159-896185, mismatch: 2, identity: 0.926

cattattgtaagctgactttctgtcag	CRISPR spacer
cattattgtaagctgactttccgccag	Protospacer
*********************.*.***

40. spacer 8.3|2231386|27|CP020354|CRT matches to position: 1012851-1012877, mismatch: 2, identity: 0.926

cattattgtaagctgactttctgtcag	CRISPR spacer
cattattgtaagctgacttttcgtcag	Protospacer
********************..*****

41. spacer 8.3|2231386|27|CP020354|CRT matches to position: 1113907-1113933, mismatch: 2, identity: 0.926

cattattgtaagctgactttctgtcag	CRISPR spacer
cattattgtaagctgacttttcgtcag	Protospacer
********************..*****

42. spacer 8.3|2231386|27|CP020354|CRT matches to position: 1199704-1199730, mismatch: 2, identity: 0.926

cattattgtaagctgactttctgtcag	CRISPR spacer
cattattgtaagctgacttttcgtcag	Protospacer
********************..*****

43. spacer 8.3|2231386|27|CP020354|CRT matches to position: 1325213-1325239, mismatch: 2, identity: 0.926

cattattgtaagctgactttctgtcag	CRISPR spacer
cattattgtaagctgacttttcgtcag	Protospacer
********************..*****

44. spacer 8.3|2231386|27|CP020354|CRT matches to position: 2265645-2265671, mismatch: 2, identity: 0.926

cattattgtaagctgactttctgtcag	CRISPR spacer
cattattgtaagctgacttttcgtcag	Protospacer
********************..*****

45. spacer 9.1|2660132|30|CP020354|CRISPRCasFinder matches to position: 757927-757956, mismatch: 2, identity: 0.933

ttgtctgtagaaactgggaattcaatttct	CRISPR spacer
ttgtctgtagaaattgggaatccaatttct	Protospacer
*************.*******.********

46. spacer 9.1|2660132|30|CP020354|CRISPRCasFinder matches to position: 804460-804489, mismatch: 2, identity: 0.933

ttgtctgtagaaactgggaattcaatttct	CRISPR spacer
ttgtctgtagaaattgggaatccaatttct	Protospacer
*************.*******.********

47. spacer 9.1|2660132|30|CP020354|CRISPRCasFinder matches to position: 847631-847660, mismatch: 2, identity: 0.933

ttgtctgtagaaactgggaattcaatttct	CRISPR spacer
ttgtctgtagaaattgggaatccaatttct	Protospacer
*************.*******.********

48. spacer 9.1|2660132|30|CP020354|CRISPRCasFinder matches to position: 1039240-1039269, mismatch: 2, identity: 0.933

ttgtctgtagaaactgggaattcaatttct	CRISPR spacer
ttgtctgtagaaattgggaatccaatttct	Protospacer
*************.*******.********

49. spacer 9.1|2660132|30|CP020354|CRISPRCasFinder matches to position: 1413534-1413563, mismatch: 2, identity: 0.933

ttgtctgtagaaactgggaattcaatttct	CRISPR spacer
ttgtctgtagaaattgggaatccaatttct	Protospacer
*************.*******.********

50. spacer 9.1|2660132|30|CP020354|CRISPRCasFinder matches to position: 1914849-1914878, mismatch: 2, identity: 0.933

ttgtctgtagaaactgggaattcaatttct	CRISPR spacer
ttgtctgtagaaattgggaatccaatttct	Protospacer
*************.*******.********

51. spacer 9.1|2660132|30|CP020354|CRISPRCasFinder matches to position: 2073263-2073292, mismatch: 2, identity: 0.933

ttgtctgtagaaactgggaattcaatttct	CRISPR spacer
ttgtctgtagaaattgggaatccaatttct	Protospacer
*************.*******.********

52. spacer 9.1|2660132|30|CP020354|CRISPRCasFinder matches to position: 2265698-2265727, mismatch: 2, identity: 0.933

ttgtctgtagaaactgggaattcaatttct	CRISPR spacer
ttgtctgtagaaattgggaatccaatttct	Protospacer
*************.*******.********

53. spacer 9.1|2660132|30|CP020354|CRISPRCasFinder matches to position: 2660243-2660272, mismatch: 2, identity: 0.933

ttgtctgtagaaactgggaattcaatttct	CRISPR spacer
ttgtctgtagaaattgggaatccaatttct	Protospacer
*************.*******.********

54. spacer 9.2|2660187|31|CP020354|CRISPRCasFinder matches to position: 811609-811639, mismatch: 2, identity: 0.935

cattattgtaggctgactttccgccagcttc	CRISPR spacer
cattattgtaagctgactttccgtcagcttc	Protospacer
**********.************.*******

55. spacer 9.2|2660187|31|CP020354|CRISPRCasFinder matches to position: 896155-896185, mismatch: 2, identity: 0.935

cattattgtaggctgactttccgccagcttc	CRISPR spacer
cattattgtaagctgactttccgccagcctc	Protospacer
**********.*****************.**

56. spacer 9.2|2660187|31|CP020354|CRISPRCasFinder matches to position: 1606844-1606874, mismatch: 2, identity: 0.935

cattattgtaggctgactttccgccagcttc	CRISPR spacer
cattatcgtaagctgactttccgccagcttc	Protospacer
******.***.********************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 NZ_CP040462 Enterococcus sp. M190262 plasmid pM190262, complete sequence 41880-41909 6 0.8
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 NZ_CP034684 Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence 33236-33265 6 0.8
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 KM359505 Prochlorococcus phage P-TIM68, complete genome 102712-102741 6 0.8
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 NZ_KY940428 UNVERIFIED: Bacillus sp. (in: Bacteria) strain PUMK-07 plasmid pMK-07, complete sequence 107756-107785 6 0.8
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 NZ_CP041978 Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence 12746-12775 6 0.8
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 NC_011655 Bacillus cereus AH187 plasmid pAH187_270, complete sequence 83379-83408 6 0.8
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 NZ_CP029457 Bacillus cereus strain FORC087 plasmid pFORC087.3, complete sequence 55620-55649 6 0.8
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 NC_010924 Bacillus cereus strain AH187 plasmid pCER270, complete sequence 139788-139817 6 0.8
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 NC_011777 Bacillus cereus AH820 plasmid pAH820_272, complete sequence 97420-97449 6 0.8
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 CP045776 Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence 129103-129132 6 0.8
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 CP041980 Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence 296472-296501 6 0.8
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 NC_016792 Bacillus cereus NC7401 plasmid pNCcld, complete sequence 138657-138686 6 0.8
CP020354_1 1.1|261546|32|CP020354|CRT 261546-261577 32 NZ_CP044300 Escherichia coli strain P59A plasmid pP59A-2, complete sequence 114276-114307 8 0.75
CP020354_5 5.1|1913389|33|CP020354|CRISPRCasFinder 1913389-1913421 33 MT150133 Enterobacteria phage vB_EcoM_IME540, complete genome 25909-25941 8 0.758
CP020354_5 5.1|1913389|33|CP020354|CRISPRCasFinder 1913389-1913421 33 MK234886 Escherichia phage AnYang, complete genome 114958-114990 8 0.758
CP020354_5 5.1|1913389|33|CP020354|CRISPRCasFinder 1913389-1913421 33 MF036691 Serratia phage CBH8, complete genome 7593-7625 8 0.758
CP020354_5 5.1|1913389|33|CP020354|CRISPRCasFinder 1913389-1913421 33 MF036690 Serratia phage CHI14, complete genome 7593-7625 8 0.758
CP020354_5 5.1|1913389|33|CP020354|CRISPRCasFinder 1913389-1913421 33 MF036692 Serratia phage X20, complete genome 7813-7845 8 0.758
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 NC_013085 Synechococcus phage S-RSM4, complete genome 71945-71974 8 0.733
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 FM207411 Synechococcus phage S-RSM4 complete genome 71945-71974 8 0.733
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 MW117966 Synechococcus phage S-H9-1, complete genome 132425-132454 9 0.7
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 HM452126 Aeromonas phage phiAS5, complete genome 16075-16104 9 0.7
CP020354_8 8.2|2231327|30|CP020354|CRT 2231327-2231356 30 JX238501 Bacillus phage phiAGATE, complete genome 76143-76172 10 0.667

1. spacer 8.2|2231327|30|CP020354|CRT matches to NZ_CP040462 (Enterococcus sp. M190262 plasmid pM190262, complete sequence) position: , mismatch: 6, identity: 0.8

tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
tattttgtctgtaggatatctttttgaaaa	Protospacer
*.. **********.** *********** 

2. spacer 8.2|2231327|30|CP020354|CRT matches to NZ_CP034684 (Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence) position: , mismatch: 6, identity: 0.8

-tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
atgaggt-tctgtagtttttctttttgaaat	Protospacer
 ** . * *******  **************

3. spacer 8.2|2231327|30|CP020354|CRT matches to KM359505 (Prochlorococcus phage P-TIM68, complete genome) position: , mismatch: 6, identity: 0.8

tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
tcaatgatctgtataatttcttttggaaat	Protospacer
*  ** .****** ********** *****

4. spacer 8.2|2231327|30|CP020354|CRT matches to NZ_KY940428 (UNVERIFIED: Bacillus sp. (in: Bacteria) strain PUMK-07 plasmid pMK-07, complete sequence) position: , mismatch: 6, identity: 0.8

-tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
atgaggt-tctgtagtttttctttttgaaat	Protospacer
 ** . * *******  **************

5. spacer 8.2|2231327|30|CP020354|CRT matches to NZ_CP041978 (Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

-tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
atgaggt-tctgtagtttttctttttgaaat	Protospacer
 ** . * *******  **************

6. spacer 8.2|2231327|30|CP020354|CRT matches to NC_011655 (Bacillus cereus AH187 plasmid pAH187_270, complete sequence) position: , mismatch: 6, identity: 0.8

-tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
atgaggt-tctgtagtttttctttttgaaat	Protospacer
 ** . * *******  **************

7. spacer 8.2|2231327|30|CP020354|CRT matches to NZ_CP029457 (Bacillus cereus strain FORC087 plasmid pFORC087.3, complete sequence) position: , mismatch: 6, identity: 0.8

-tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
atgaggt-tctgtagtttttctttttgaaat	Protospacer
 ** . * *******  **************

8. spacer 8.2|2231327|30|CP020354|CRT matches to NC_010924 (Bacillus cereus strain AH187 plasmid pCER270, complete sequence) position: , mismatch: 6, identity: 0.8

-tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
atgaggt-tctgtagtttttctttttgaaat	Protospacer
 ** . * *******  **************

9. spacer 8.2|2231327|30|CP020354|CRT matches to NC_011777 (Bacillus cereus AH820 plasmid pAH820_272, complete sequence) position: , mismatch: 6, identity: 0.8

-tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
atgaggt-tctgtagtttttctttttgaaat	Protospacer
 ** . * *******  **************

10. spacer 8.2|2231327|30|CP020354|CRT matches to CP045776 (Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence) position: , mismatch: 6, identity: 0.8

-tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
atgaggt-tctgtagtttttctttttgaaat	Protospacer
 ** . * *******  **************

11. spacer 8.2|2231327|30|CP020354|CRT matches to CP041980 (Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

-tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
atgaggt-tctgtagtttttctttttgaaat	Protospacer
 ** . * *******  **************

12. spacer 8.2|2231327|30|CP020354|CRT matches to NC_016792 (Bacillus cereus NC7401 plasmid pNCcld, complete sequence) position: , mismatch: 6, identity: 0.8

-tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
atgaggt-tctgtagtttttctttttgaaat	Protospacer
 ** . * *******  **************

13. spacer 1.1|261546|32|CP020354|CRT matches to NZ_CP044300 (Escherichia coli strain P59A plasmid pP59A-2, complete sequence) position: , mismatch: 8, identity: 0.75

agaagctggcggaaagtcagcatacaataatg	CRISPR spacer
agaagctggcggaacttcagcattagttaaac	Protospacer
**************  *******  . ***  

14. spacer 5.1|1913389|33|CP020354|CRISPRCasFinder matches to MT150133 (Enterobacteria phage vB_EcoM_IME540, complete genome) position: , mismatch: 8, identity: 0.758

ttgcctgtagaatttcttttttgaaattctcta	CRISPR spacer
taacaaagagaatttctttttcaaaattctcta	Protospacer
* .*  . *************..**********

15. spacer 5.1|1913389|33|CP020354|CRISPRCasFinder matches to MK234886 (Escherichia phage AnYang, complete genome) position: , mismatch: 8, identity: 0.758

ttgcctgtagaatttcttttttgaaattctcta	CRISPR spacer
taacaaagagaatttctttttcaaaattctcta	Protospacer
* .*  . *************..**********

16. spacer 5.1|1913389|33|CP020354|CRISPRCasFinder matches to MF036691 (Serratia phage CBH8, complete genome) position: , mismatch: 8, identity: 0.758

ttgcctgt---agaatttcttttttgaaattctcta	CRISPR spacer
---gatgtgaaaggatttcttttttgaaattatctt	Protospacer
     ***   **.***************** *** 

17. spacer 5.1|1913389|33|CP020354|CRISPRCasFinder matches to MF036690 (Serratia phage CHI14, complete genome) position: , mismatch: 8, identity: 0.758

ttgcctgt---agaatttcttttttgaaattctcta	CRISPR spacer
---gatgtgaaaggatttcttttttgaaattatctt	Protospacer
     ***   **.***************** *** 

18. spacer 5.1|1913389|33|CP020354|CRISPRCasFinder matches to MF036692 (Serratia phage X20, complete genome) position: , mismatch: 8, identity: 0.758

ttgcctgt---agaatttcttttttgaaattctcta	CRISPR spacer
---gatgtgaaaggatttcttttttgaaattatctt	Protospacer
     ***   **.***************** *** 

19. spacer 8.2|2231327|30|CP020354|CRT matches to NC_013085 (Synechococcus phage S-RSM4, complete genome) position: , mismatch: 8, identity: 0.733

tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
tgagagaattgtagagtttctttttgaaat	Protospacer
** .  . .******.**************

20. spacer 8.2|2231327|30|CP020354|CRT matches to FM207411 (Synechococcus phage S-RSM4 complete genome) position: , mismatch: 8, identity: 0.733

tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
tgagagaattgtagagtttctttttgaaat	Protospacer
** .  . .******.**************

21. spacer 8.2|2231327|30|CP020354|CRT matches to MW117966 (Synechococcus phage S-H9-1, complete genome) position: , mismatch: 9, identity: 0.7

tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
taagagaattgtagagtttctttttgaaat	Protospacer
*. .  . .******.**************

22. spacer 8.2|2231327|30|CP020354|CRT matches to HM452126 (Aeromonas phage phiAS5, complete genome) position: , mismatch: 9, identity: 0.7

tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
aaatatgtctgtagaattgcttgttgaaga	Protospacer
 .   ************* *** *****. 

23. spacer 8.2|2231327|30|CP020354|CRT matches to JX238501 (Bacillus phage phiAGATE, complete genome) position: , mismatch: 10, identity: 0.667

tgcattgtctgtagaatttctttttgaaat	CRISPR spacer
ccttttgtctgtataatttctttttcttca	Protospacer
. . ********* ***********     

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 736103 : 743924 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_2 755895 : 770547 12 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_3 1014359 : 1022832 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_4 1283775 : 1290165 14 Staphylococcus_phage(66.67%) capsid NA
DBSCAN-SWA_5 1563873 : 1572185 8 Staphylococcus_phage(16.67%) tRNA NA
DBSCAN-SWA_6 1641616 : 1650659 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_7 1687957 : 1693801 7 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_8 1776680 : 1844782 72 Staphylococcus_phage(94.34%) tRNA,protease NA
DBSCAN-SWA_9 1977901 : 1994038 25 Staphylococcus_phage(78.95%) terminase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP020355
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 356 : 11244 8 Streptococcus_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage