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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP028095 Synechocystis sp. IPPAS B-1465 plasmid pCA, complete sequence 0 crisprs NA 0 0 0 0
CP028099 Synechocystis sp. IPPAS B-1465 plasmid pSYSM, complete sequence 0 crisprs csa3,WYL 0 0 0 0
CP028100 Synechocystis sp. IPPAS B-1465 plasmid pSYSX, complete sequence 0 crisprs NA 0 0 1 0
CP028094 Synechocystis sp. IPPAS B-1465 chromosome, complete genome 0 crisprs RT,cas4,csa3,c2c9_V-U4,DEDDh,PD-DExK,cas3 0 0 3 0
CP028098 Synechocystis sp. IPPAS B-1465 plasmid pSYSG, complete sequence 0 crisprs NA 0 0 0 0
CP028096 Synechocystis sp. IPPAS B-1465 plasmid pCB, complete sequence 0 crisprs NA 0 0 0 0
CP028097 Synechocystis sp. IPPAS B-1465 plasmid pSYSA, complete sequence 0 crisprs WYL,cas3,cas10d,csc2gr7,csc1gr5,cas6,cas4,cas1,cas2,csx1,csm6,csm3gr7,csx19,cas10,csx18,csx3,cmr5gr11,cmr4gr7,cmr3gr5 0 0 8 0

Results visualization

1. CP028097
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 2965 5 Acinetobacter_phage(100.0%) transposase,integrase attL 292:305|attR 12759:12772
DBSCAN-SWA_2 26351 : 28630 2 Cyanophage(100.0%) NA NA
DBSCAN-SWA_3 32646 : 38712 8 Brucella_phage(50.0%) NA NA
DBSCAN-SWA_4 41844 : 42492 1 Klebsiella_phage(100.0%) NA NA
DBSCAN-SWA_5 47528 : 48242 1 Microcystis_virus(100.0%) NA NA
DBSCAN-SWA_6 72800 : 73382 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_7 93595 : 95267 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_8 100168 : 100555 1 Virus_Rctr197k(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP028100
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 30622 : 41580 11 uncultured_Mediterranean_phage(14.29%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP028094
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2467246 : 2535794 54 Synechococcus_phage(16.67%) tRNA,protease,transposase NA
DBSCAN-SWA_2 3039215 : 3099559 57 Roseobacter_phage(16.67%) protease,transposase NA
DBSCAN-SWA_3 3227180 : 3236027 11 Paramecium_bursaria_Chlorella_virus(16.67%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage