CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP028127	Xanthomonas vasicola pv. vasculorum strain SAM119 chromosome, complete genome	3 crisprs	DEDDh,WYL,cas3,DinG,RT,cas5,cas8c,cas7,cas4,cas1,cas2	2	18	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP028127_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP028127_2

4333469-4336200

TypeI

I-C

Consensus_repeat	Method
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	PILER-CR
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CRISPRCasFinder
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CRT

41 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of CP028127_2

>merge|CP028127|2|4333469-4336200|PILER-CR,CRISPRCasFinder,CRT
GTCGCGCCCTCACGGGCGCGTGGATTGAAACGCAAGTCGTTGCGGTGGGTACGCTCGATGCCACGGTCGCGCCCTCACGGGCGCGTGGATTGAAACACAACATCGCCAGCCATAGCAATTACACTTGCTGCAGTCGCGCCCTCACGGGCGCGTGGATTGAAACACGTCAATCCCGCCCTCAAGGACAGGAGTCCTGCCCGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTGATTACACCCTGCAACACATCTGCACCCATCCGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTCTAATCCCGAAGAAGTCCTCGAAATCCACCGGTCGCGCCCTCACGGGCGCGTGGATTGAAACGGGCAAGAACTGGGAGCCCAAGGAGGTAAATGGCAGTCGCGCCCTCACGGGCGCGTGGATTGAAACATAGTCATCAATGGGTTGCCCAATGGGCTCCATGTCGCGCCCTCACGGGCGCGTGGATTGAAACACCCGAATAATCCAATTCTGTGCTGGTCTTGCCGTCGCGCCCTCACGGGCGCGTGGATTGAAACCGGAATGCACCAGTGTGGAACCAAGGGAATGGCCCGTCGCGCCCTCACGGGCGCGTGGATTGAAACTGATAGCCCGTCACAGTAACACCAACACTTGATTGTCGCGCCCTCACGGGCGCGTGGATTGAAACTGCGACTTCAGGGGCCGCAAGTACTCTATGACCAGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTGGTAGCTGTTATCTCGGTACAGAGGCATACCGGGTCGCGCCCTCACGGGCGCGTGGATTGAAACTCTCTATTGGTTGGGCTTGCGTCGGTTGGGTTACTGTCGCGCCCTCACGGGCGCGTGGATTGAAACCCGACGAACGCATACAACAGATCGCAAAGATCGCCGTCGCGCCCTCACGGGCGCGTGGATTGAAACGGTGTCAGTTGGCCGTGCCATTAGGCAGCCTCCGCGAGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTTACGCCTGAGGGCAAGACCATCGAGCAGTGCGATAGTCGCGCCCTCACGGGCGCGTGGATTGAAACTGTGCACCTTCTGCAACCGGGGCGGCTGCATTGGGTCGCGCCCTCACGGGCGCGTGGATTGAAACCGCCGGTATGCATCCTTTGCAAAAGTCATTACAGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACTCCGCCAATGTGGCTCAGTCTGTGGAGGCTGGCCGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACCATCCTGACCGACGCCGGTCCGCGCATCACGGAGAGGTCGCGCCCTCACGGGCGCGTGGATTGAAACAAGCTCGGCGCCGGTTGTCGGGATCGCGATTGGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACACCATTGTGCTCATGTAGGTACTACGGGCGGCACTGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTCAATTCTGCAAGACGCTTGCGGGCGGCGTTGTTGGTCGCGCCCTCACGGGCGCGTGGATTGAAACTCAGCCGGCAAGAGACCCATATCATCCAATTTGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACCCCAGCGCAGACTGAAAGCTCGAACTGATCGAGCCCGTCGCGCCCTCACGGGCGCGTGGATTGAAACGGACAGGTCGTCCGATGTTGGAACTTTCCGGCCGTGTCGCGCCCTCACGGGCGCGTGGATTGAAACTCTACTTGGTCTGTCATTTGCGCCCCTAGGCGGTTGTCGCGCCCTCACGGGCGCGTGGATTGAAACATTGTCGTGATCGCCAAGGCTGTTATCCGCGCTGTAGTCGCGCCCTCACGGGCGCGTGGATTGAAACAGGAGCTCAATGCCCGCCCAATCGGCCGGATTAATGTCGCGCCCTCACGGGCGCGTGGATTGAAACGCAATTGATGTCTGAGGAGACTTGGTTTAACGCGGGTCGCGCCCTCACGGGCGCGTGGATTGAAACCAGCGAGATGAGGCAGAAGCGAGAGCCCGTGCAGAGTCGCGCCCTCACGGGCGCGTGGATTGAAACCGACCTAACCCTGTTACGCCTAGGCCTGCGCCGTGGGTCGCGCCCTCACGGGCGCGTGGATTGAAACAAGACTTGGTACTTTGATGAGAGTGCTGAGGGAGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTGAGCCCGTGCCAAGTGACTTACCTGCCAAAGGAAGTCGCGCCCTCACGGGCGCGTGGATTGAAACATCGCGGCGGGGAAGTACCCAAATAGCACGGAGTGTCGCGCCCTCACGGGCGCGTGGATTGAAACCGGGGACTTTGAAGATGCAAGGCTTATCGAGTGGGTCGCGCCCTCACGGGCGCGTGGATTGAAACCGCTCTTGGTGTATTCAGTTACGACCGATGCAACAGGTCGCGCCCTCACGGGCGCGTGGATTGAAACTATGCACACTACTGGAAGGGTGCACATAGCCCGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTCGCCTGGTGCCTAGAGTACGCAGACTGGCAGGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACATACCGTCGCGTGGCAAGCCCCTGTAGCTTGATCTGTCGCGCCCTCACGGGCGCGTGGATTGAAACTGGTAATTAGAGTCAATTGTCAAGGCGTTTTGCGGTCGCGCCCTCACGGTGTCACCAGCACTTTT

>CP028127|2|2|4333469-4336135|PILER-CR
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCAAGTCGTTGCGGTGGGTACGCTCGATGCCACG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACAACATCGCCAGCCATAGCAATTACACTTGCTGCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACGTCAATCCCGCCCTCAAGGACAGGAGTCCTGCCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTGATTACACCCTGCAACACATCTGCACCCATCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTCTAATCCCGAAGAAGTCCTCGAAATCCACCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GGGCAAGAACTGGGAGCCCAAGGAGGTAAATGGCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATAGTCATCAATGGGTTGCCCAATGGGCTCCAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACCCGAATAATCCAATTCTGTGCTGGTCTTGCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGGAATGCACCAGTGTGGAACCAAGGGAATGGCCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGATAGCCCGTCACAGTAACACCAACACTTGATT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCGACTTCAGGGGCCGCAAGTACTCTATGACCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTGGTAGCTGTTATCTCGGTACAGAGGCATACCGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCTCTATTGGTTGGGCTTGCGTCGGTTGGGTTACT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCGACGAACGCATACAACAGATCGCAAAGATCGCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GGTGTCAGTTGGCCGTGCCATTAGGCAGCCTCCGCGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTACGCCTGAGGGCAAGACCATCGAGCAGTGCGATA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGTGCACCTTCTGCAACCGGGGCGGCTGCATTGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGCCGGTATGCATCCTTTGCAAAAGTCATTACAGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCCGCCAATGTGGCTCAGTCTGTGGAGGCTGGCCGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CATCCTGACCGACGCCGGTCCGCGCATCACGGAGAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGCTCGGCGCCGGTTGTCGGGATCGCGATTGGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACCATTGTGCTCATGTAGGTACTACGGGCGGCACT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTCAATTCTGCAAGACGCTTGCGGGCGGCGTTGTTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCAGCCGGCAAGAGACCCATATCATCCAATTTGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCCAGCGCAGACTGAAAGCTCGAACTGATCGAGCCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GGACAGGTCGTCCGATGTTGGAACTTTCCGGCCGT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCTACTTGGTCTGTCATTTGCGCCCCTAGGCGGTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATTGTCGTGATCGCCAAGGCTGTTATCCGCGCTGTA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGAGCTCAATGCCCGCCCAATCGGCCGGATTAAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCAATTGATGTCTGAGGAGACTTGGTTTAACGCGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAGCGAGATGAGGCAGAAGCGAGAGCCCGTGCAGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGACCTAACCCTGTTACGCCTAGGCCTGCGCCGTGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGACTTGGTACTTTGATGAGAGTGCTGAGGGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGAGCCCGTGCCAAGTGACTTACCTGCCAAAGGAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATCGCGGCGGGGAAGTACCCAAATAGCACGGAGT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGGGGACTTTGAAGATGCAAGGCTTATCGAGTGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGCTCTTGGTGTATTCAGTTACGACCGATGCAACAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TATGCACACTACTGGAAGGGTGCACATAGCCCGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTCGCCTGGTGCCTAGAGTACGCAGACTGGCAGGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATACCGTCGCGTGGCAAGCCCCTGTAGCTTGATCT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC

>CP028127|2|1|4333469-4336135|CRISPRCasFinder
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCAAGTCGTTGCGGTGGGTACGCTCGATGCCACG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACAACATCGCCAGCCATAGCAATTACACTTGCTGCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACGTCAATCCCGCCCTCAAGGACAGGAGTCCTGCCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTGATTACACCCTGCAACACATCTGCACCCATCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTCTAATCCCGAAGAAGTCCTCGAAATCCACCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GGGCAAGAACTGGGAGCCCAAGGAGGTAAATGGCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATAGTCATCAATGGGTTGCCCAATGGGCTCCAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACCCGAATAATCCAATTCTGTGCTGGTCTTGCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGGAATGCACCAGTGTGGAACCAAGGGAATGGCCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGATAGCCCGTCACAGTAACACCAACACTTGATT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCGACTTCAGGGGCCGCAAGTACTCTATGACCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTGGTAGCTGTTATCTCGGTACAGAGGCATACCGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCTCTATTGGTTGGGCTTGCGTCGGTTGGGTTACT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCGACGAACGCATACAACAGATCGCAAAGATCGCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GGTGTCAGTTGGCCGTGCCATTAGGCAGCCTCCGCGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTACGCCTGAGGGCAAGACCATCGAGCAGTGCGATA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGTGCACCTTCTGCAACCGGGGCGGCTGCATTGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGCCGGTATGCATCCTTTGCAAAAGTCATTACAGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCCGCCAATGTGGCTCAGTCTGTGGAGGCTGGCCGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CATCCTGACCGACGCCGGTCCGCGCATCACGGAGAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGCTCGGCGCCGGTTGTCGGGATCGCGATTGGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACCATTGTGCTCATGTAGGTACTACGGGCGGCACT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTCAATTCTGCAAGACGCTTGCGGGCGGCGTTGTTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCAGCCGGCAAGAGACCCATATCATCCAATTTGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCCAGCGCAGACTGAAAGCTCGAACTGATCGAGCCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GGACAGGTCGTCCGATGTTGGAACTTTCCGGCCGT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCTACTTGGTCTGTCATTTGCGCCCCTAGGCGGTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATTGTCGTGATCGCCAAGGCTGTTATCCGCGCTGTA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGAGCTCAATGCCCGCCCAATCGGCCGGATTAAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCAATTGATGTCTGAGGAGACTTGGTTTAACGCGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAGCGAGATGAGGCAGAAGCGAGAGCCCGTGCAGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGACCTAACCCTGTTACGCCTAGGCCTGCGCCGTGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGACTTGGTACTTTGATGAGAGTGCTGAGGGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGAGCCCGTGCCAAGTGACTTACCTGCCAAAGGAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATCGCGGCGGGGAAGTACCCAAATAGCACGGAGT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGGGGACTTTGAAGATGCAAGGCTTATCGAGTGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGCTCTTGGTGTATTCAGTTACGACCGATGCAACAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TATGCACACTACTGGAAGGGTGCACATAGCCCGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTCGCCTGGTGCCTAGAGTACGCAGACTGGCAGGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATACCGTCGCGTGGCAAGCCCCTGTAGCTTGATCT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC

>CP028127|2|1|4333469-4336200|CRT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCAAGTCGTTGCGGTGGGTACGCTCGATGCCACG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACAACATCGCCAGCCATAGCAATTACACTTGCTGCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACGTCAATCCCGCCCTCAAGGACAGGAGTCCTGCCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTGATTACACCCTGCAACACATCTGCACCCATCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTCTAATCCCGAAGAAGTCCTCGAAATCCACCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GGGCAAGAACTGGGAGCCCAAGGAGGTAAATGGCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATAGTCATCAATGGGTTGCCCAATGGGCTCCAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACCCGAATAATCCAATTCTGTGCTGGTCTTGCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGGAATGCACCAGTGTGGAACCAAGGGAATGGCCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGATAGCCCGTCACAGTAACACCAACACTTGATT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCGACTTCAGGGGCCGCAAGTACTCTATGACCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTGGTAGCTGTTATCTCGGTACAGAGGCATACCGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCTCTATTGGTTGGGCTTGCGTCGGTTGGGTTACT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCGACGAACGCATACAACAGATCGCAAAGATCGCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GGTGTCAGTTGGCCGTGCCATTAGGCAGCCTCCGCGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTACGCCTGAGGGCAAGACCATCGAGCAGTGCGATA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGTGCACCTTCTGCAACCGGGGCGGCTGCATTGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGCCGGTATGCATCCTTTGCAAAAGTCATTACAGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCCGCCAATGTGGCTCAGTCTGTGGAGGCTGGCCGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CATCCTGACCGACGCCGGTCCGCGCATCACGGAGAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGCTCGGCGCCGGTTGTCGGGATCGCGATTGGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACCATTGTGCTCATGTAGGTACTACGGGCGGCACT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTCAATTCTGCAAGACGCTTGCGGGCGGCGTTGTTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCAGCCGGCAAGAGACCCATATCATCCAATTTGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCCAGCGCAGACTGAAAGCTCGAACTGATCGAGCCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GGACAGGTCGTCCGATGTTGGAACTTTCCGGCCGT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCTACTTGGTCTGTCATTTGCGCCCCTAGGCGGTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATTGTCGTGATCGCCAAGGCTGTTATCCGCGCTGTA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGAGCTCAATGCCCGCCCAATCGGCCGGATTAAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCAATTGATGTCTGAGGAGACTTGGTTTAACGCGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAGCGAGATGAGGCAGAAGCGAGAGCCCGTGCAGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGACCTAACCCTGTTACGCCTAGGCCTGCGCCGTGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAGACTTGGTACTTTGATGAGAGTGCTGAGGGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGAGCCCGTGCCAAGTGACTTACCTGCCAAAGGAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATCGCGGCGGGGAAGTACCCAAATAGCACGGAGT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGGGGACTTTGAAGATGCAAGGCTTATCGAGTGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGCTCTTGGTGTATTCAGTTACGACCGATGCAACAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TATGCACACTACTGGAAGGGTGCACATAGCCCGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTCGCCTGGTGCCTAGAGTACGCAGACTGGCAGGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATACCGTCGCGTGGCAAGCCCCTGTAGCTTGATCT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGTAATTAGAGTCAATTGTCAAGGCGTTTTGCG
GTCGCGCCCTCACGGTGTCACCAGCACTTTT

Protein	Signature genes	Signature genes Name	Protein_function
CP028127.1\|AVQ08489.1\|4323250_4324951_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227059
CP028127.1\|AVQ08497.1\|4336267_4337308_+\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
CP028127.1\|AVQ08490.1\|4325114_4327409_+\|CRISPR-associated-endonuclease-Cas3''	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
CP028127.1\|AVQ08499.1\|4339749_4340304_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236776
CP028127.1\|AVQ08498.1\|4337307_4338108_+\|transposase	unknown	unknown	gnl\|CDD\|181681
CP028127.1\|AVQ08504.1\|4344691_4347940_+\|acriflavine-resistance-protein-B	unknown	unknown	gnl\|CDD\|182501
CP028127.1\|AVQ08494.1\|4331304_4331937_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
CP028127.1\|AVQ08506.1\|4352091_4352421_+\|glyoxalase	unknown	unknown	gnl\|CDD\|226134
CP028127.1\|AVQ08488.1\|4320815_4323047_-\|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl\|CDD\|377178
CP028127.1\|AVQ08500.1\|4340409_4340703_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|236880
CP028127.1\|AVQ08492.1\|4328565_4330410_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
CP028127.1\|AVQ08495.1\|4331939_4332974_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
CP028127.1\|AVQ08505.1\|4348055_4351184_+\|AcrB/AcrD/AcrF-family-protein	unknown	unknown	gnl\|CDD\|223911
CP028127.1\|AVQ08502.1\|4341777_4343094_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|349917
CP028127.1\|AVQ08493.1\|4330406_4331285_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
CP028127.1\|AVQ08501.1\|4340803_4341619_-\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	unknown	unknown	gnl\|CDD\|236986
CP028127.1\|AVQ08503.1\|4343352_4344597_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|183194
CP028127.1\|AVQ08496.1\|4332989_4333280_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP028127.1\|AVQ08487.1\|4319438_4320386_-\|biotin-transporter-BioY	unknown	unknown	gnl\|CDD\|182990
CP028127.1\|AVQ08491.1\|4327894_4328569_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534

Protein	Function_ID	Function_description	E-value
CP028127.1\|AVQ08489.1\|4323250_4324951_+\|hypothetical-protein	gnl\|CDD\|227059	COG4715, COG4715, Uncharacterized conserved protein [Function unknown].	9.20415e-11
CP028127.1\|AVQ08497.1\|4336267_4337308_+\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.72019e-49
CP028127.1\|AVQ08490.1\|4325114_4327409_+\|CRISPR-associated-endonuclease-Cas3''	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	7.66289e-57
CP028127.1\|AVQ08499.1\|4339749_4340304_-\|hypothetical-protein	gnl\|CDD\|236776	PRK10856, PRK10856, cytoskeleton protein RodZ.	0.00121454
CP028127.1\|AVQ08498.1\|4337307_4338108_+\|transposase	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	2.48298e-158
CP028127.1\|AVQ08504.1\|4344691_4347940_+\|acriflavine-resistance-protein-B	gnl\|CDD\|182501	PRK10503, PRK10503, MdtB/MuxB family multidrug efflux RND transporter permease subunit.	0
CP028127.1\|AVQ08494.1\|4331304_4331937_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	2.35377e-44
CP028127.1\|AVQ08506.1\|4352091_4352421_+\|glyoxalase	gnl\|CDD\|226134	COG3607, COG3607, Predicted lactoylglutathione lyase [General function prediction only].	3.92491e-37
CP028127.1\|AVQ08488.1\|4320815_4323047_-\|NADP-dependent-isocitrate-dehydrogenase	gnl\|CDD\|377178	pfam03971, IDH, Monomeric isocitrate dehydrogenase. NADP(+)-dependent isocitrate dehydrogenase (ICD) is an important enzyme of the intermediary metabolism, as it controls the carbon flux within the citric acid cycle and supplies the cell with 2-oxoglutarate EC:1.1.1.42 and NADPH for biosynthetic purposes.	0
CP028127.1\|AVQ08500.1\|4340409_4340703_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|236880	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional.	1.26222e-25
CP028127.1\|AVQ08492.1\|4328565_4330410_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
CP028127.1\|AVQ08495.1\|4331939_4332974_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
CP028127.1\|AVQ08505.1\|4348055_4351184_+\|AcrB/AcrD/AcrF-family-protein	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
CP028127.1\|AVQ08502.1\|4341777_4343094_-\|amidohydrolase	gnl\|CDD\|349917	cd05667, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily. Peptidase M20 family, uncharacterized subfamily of bacterial proteins that have been predicted as N-acyl-L-amino acid amidohydrolase (amaA), thermostable carboxypeptidase (cpsA-1, cpsA-2 in Sulfolobus solfataricus) and abgB (aminobenzoyl-glutamate utilization protein B), and generally are involved in the urea cycle and metabolism of amino groups. Aminoacylases 1 (ACY1s) comprise a class of zinc binding homodimeric enzymes involved in the hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and is a highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. ACY1 breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	0
CP028127.1\|AVQ08493.1\|4330406_4331285_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	2.06054e-155
CP028127.1\|AVQ08501.1\|4340803_4341619_-\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	gnl\|CDD\|236986	PRK11792, queF, 7-cyano-7-deazaguanine reductase; Provisional.	6.68825e-174
CP028127.1\|AVQ08503.1\|4343352_4344597_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|183194	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit.	1.5907e-93
CP028127.1\|AVQ08496.1\|4332989_4333280_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.02577e-32
CP028127.1\|AVQ08487.1\|4319438_4320386_-\|biotin-transporter-BioY	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	1.54636e-64
CP028127.1\|AVQ08491.1\|4327894_4328569_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.72681e-123

>CP028127.1|AVQ08496.1|4332989_4333280_+|CRISPR-associated-endonuclease-Cas2
MMILVSYDVSTSSPGGEKRLRKVAKACRDRGQRVQFSVFEIEVEPAQWTELRQQLCDLIDPALDSLRFYHLGAKWETRVEHIGAKPSLNLKGPLIF
>CP028127.1|AVQ08495.1|4331939_4332974_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MRRQLNTLYVTTDGAWLHKDGANVVLNVERQERTRLPVHMLESIVCIGRVGVSPQLLGFCAEQGISICYLTPQGRFLARVEGPVSGNVLLRREQYRCSDDPVRCAAIVRHLLAGKIHNQRAVLARGWRDHGERMIDIPAFQHALKRLKRIPQRLLIETSVDVLRGLEGEAAQSYFGVFGQLVRTEAPLLRFGGRNRRPPRDAFNALLSFLYTLLTHDCRSALETVGLDPAVGFLHRDRPGRPSLALDLAEEFRPLLGERLALSLINRRQLNERDFQVFDNGAVLLKDDARKTVLIAYQERKREQLQHAFLGEKIDIGLLPFVQAQLMARHLRGDLDGYPSFFWK
>CP028127.1|AVQ08494.1|4331304_4331937_+|CRISPR-associated-protein-Cas4
MDDDDLIPLSALQHYLYCPRQCALIHVERQWAENRHTAEGRLLHERADVAHTQRRRGVRTVTAMPLLALELGITGKADVVEFHHDPAGEFAFPVEYKRGRPKSHRADEVQLCAQALCLESMLKRPVDAGALFYGQTRRRKDVVFDPALRELTQRTIAETRALLSHGLTPGARYDSKRCDACSLIDLCQPRLLGCGSVDTWLRRQLDAEEE
>CP028127.1|AVQ08493.1|4330406_4331285_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSAIAHRYEFVYLFDVTNGNPNGDPDAGNLPRLDPETNRGLVTDVALKRKIRNYVALEQEGQPGHAIYMREKSVLNSQHELAWKALNIPPDEKEKYKKLPKDQAKAQELTSWMCSNFFDVRTFGAVMTTEINTGQVRGPVQLAFATSVEPVLPLEVSITRMAVTNEKDLEKERTMGRKHILPYGLYRAHGFVSAKLAERTGFSEEDLQLLWRALTNLFEHDRSAARGEMAARKLIVFEHEHPMGNAPAHVLFDKVKVERIDQADQGPARSFSDYRVVIDHALPAGVSVTELF
>CP028127.1|AVQ08492.1|4328565_4330410_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILSALADYYHRLLDDPTSGIAAPGYSQEKIGYAIVLDGGGRVVAVEDEHDYEGKKRIPKSVSVPASFKRPGIGTNPFFLWDKTSYALGVSASSKRSAQEHAAFKTLHQQALGGSEDPGLRALLTFLDTWSPAQFADHPQFSRYGEALLDTNLVFRLAGDTGYLHQRAAARAAWERLQGQSADGVSGICLISGHFAPLARLHPPVKGVNGAQSSGASIVSFNLDAFTSYGKNQGENAPISEQATFAYTTALNHLLRRDPRNRQRLQIGDSTVVFWAQARTTAHAEEAEDLIADFLRGGKTEGPGIADGQATQRLHLALEQVRQARPLREMDDALDDEARIFVLGLAPNASRLSIRFWETQTLAGFAARLAAHYQDLTLEPPAWKRPPTPQFLALQTAPVYGEHSKPKAEDVSPLLAGEVTRAILAGTRYPRSLLGGIVMRFRADGQVNPLRVALCRAVLAREARLNTQQGLSSTKGEPPVSLDTANTDPGYLLGRLFSSLENLQRTALGGQVNATIRDRYYGAASATPASIFPVLLRNAQNHFGKLRKDKAGLAVNLEKEVGKIIDALPASFPRSLPIHEQGRFAIGYYHQTQARFARNNGQDAPDTASEGEPA
>CP028127.1|AVQ08491.1|4327894_4328569_+|type-I-C-CRISPR-associated-protein-Cas5
MSYGVKLHVWGERALFTRPEMKVERVSYDIITPSAARGILEAIHWKPAIRWVVDSIQVLKPIRFESIRRNEVGGKLSAASVSKAIKAGRTDMLVSYVEEDRQQRAATLLREVGYVIAAHFELTDKAGADDNVGKHLDIFNRRARRGQCFQAPCLGTREFPASFALIEDDAAMPAADATLAGERDLGWMLHDIDFADGMTPRFFRARMVDGRVEVPAPENGGVRA
>CP028127.1|AVQ08490.1|4325114_4327409_+|CRISPR-associated-endonuclease-Cas3''
MELFAHSSKRQDRSDWQRLADHLFAVGERAARNAAPFGGQLLAGLAGQLHDLGKYTQKFQARLDGDPARVDHATWGARIACERYGTAGTLLAYGIAGHHAGLADGRPGHAAQSRPSLHERLSEDYRERELPPLLSDWERELSLPAKLALPDGFIGHPRQERRPFQLTVLTRMIFSCLVDADFTDTGDFYRRLEGRQSRAEETGTRPILPELRQCLDAHLATLPTKGGINPLRAQILSEVRAKAGMRPGLFSLTVPTGGGKTLASLGFALDHAIAHGLRRVIYVIPFTSIVEQTVQVFRHALGVQERDDIVLEHHSAFFDDPTKAPQSIDKRKLAMENWDAPIVVTTAVQFFESLFADRPSRCRKLHNIAGSVVVLDEAQTLPHALLRPCVALLDELARNYRVSPVLCTATQPTLRLDQGFAGGLDHVRELVDDPPALYARLRRVQVRHVGTLDDAALTDHLRQREQVLCIVNNRRHARHLFDAIADRPGARHLTTLMHARHRSAVLAELREDLKAGRPCRLVATSLIEAGVDVDFPTVLRAEAGLDSIAQAAGRCNREGLRPVEVSQVQVFAPANPDWAPPKELDLFAEVFRGIERTHRNDLLAMTAVADYFAALYRRLGDGRLDREDVLGLLRDADIKGLPLDTLARKFKMIQTTMRPLIVPYAPYAEGCDKEVPEVADILRQLEHAEHVGVAGAARRLQPWLVQVPEQAYRALWQANAIAPVAQARYGEQFVRLVNPRLYDPRCGLRWDDSPQFLAAEALVY
>CP028127.1|AVQ08489.1|4323250_4324951_+|hypothetical-protein
MTARFSPADLDRSFLLGITTPSYYARGLVYADQERVTLQTVEPLRVDAIVSGSDDYAVELVWRNGSLRGRCDCPIGQQAEFCKHQVAVALSWARTSADPNSQKRTKRTTAGMPVAESSDRVLQHWLSTLTPQALQALILESADNDAQLRKRLLSQAQLAVAPLQQWRKAISTLLGRKRYMDWSATIAYSKRLSVLPSLLEQARQRDPLAALDLHEYAFKRLLAIYEQVDDSRGDLGERLRVLGHAHLEAARAAGTATLGDRLFKLRMLDQWSLLRPLQDYAALLSATDIARLQHAALEILHARGNRARRLSAESLLEDTARCGGNVDAMLEFFAHTCSSGWDHLEMARRCGEYGRQRQALEWLERGVKADPQDGRLLAALATAYVRDGFPEDALTLRWKAYLLMPNEETYLALQEAASLLDAWEAWRERALQALDTKAVPRFIDAHDTRISLLLAEGQIQRALELAADQTRKLPLGTWERLLPAAETCDPAAALRICHTMIGMHIERTDRQGYVAAIRLLPTLQRLYQQQGGQGHAAFDAELARLRQQYRVKRAFIELLHKRFPAP
>CP028127.1|AVQ08488.1|4320815_4323047_-|NADP-dependent-isocitrate-dehydrogenase
MSKTPKILYTLTDEAPYLATQSLLPIIDAYTDTAGIVVETRDISLAGRILSLFPEYLSETQKIADDLGELGELATTPEANIIKLPNISASVPQLKAAIKELQGQGYALPAYPDEPKDAAEKDVKARYDKVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHRMGKWSSESKSHVSHMESGDFFGSEQSTTLADAGTLKIEFVGADGSSTVLKDKVAVKAGEIVDAAVLSKRALASFIDAQIADAKARDVLFSVHLKATMMKVSDPVLFGVVVGEFYKDTLSKHADALKSVGFDPNNGIGDLYARIGTLPEDQQAQIKADIQAEYAQRPGLAMVNSDKGITNLHVPSDVIVDASMPAMIRDSGQMWNAQGKLQDTKAVIPDRCYADVYQAVIDDCKAHGAFDPSTMGSVPNVGLMAQKAEEYGSHDKTFQMSAAGTVKVTDGNGKTVFEHAVEAGDLWRMCQVKDAPIQDWVKLAVERARLSETPAVFWLDKARAHDAQVIAKVEQYLKDHDTNGLDIRILPPVDATTFSLERIRKGQDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGLFETGAGGSAPKHVQQFVEENCLRWDSLGEFLALAASLEHLGNRYDNPSATVLAKALDVANGQFLDNNKSPARKVGELDNRGSHFYLAMYWAQALAAQTEDTALQAKFAPLAKALTEKEATIVAELNGAQGKPVEIGGYYHPDLAKVSEAMRPSKTFNDILATLKA
>CP028127.1|AVQ08487.1|4319438_4320386_-|biotin-transporter-BioY
MARPPLHALQGFVSAVRLGNLSRAASAMHLTVSALSHQMRALEQRLGYPLLQRHARGVTATLRGQQLLDRIAPHLDTIAEAIEPFGARREDTLTLSLTPSMASAWLVPRLGEFLAIHPTIEINLLSSERLVDFERQQQVDAAMRIGAGQWSGVIAEPLFDEWLVPMASPALIARMGGREAPPLHQWPLLGDPDDAWLRWFAAFGGDAPRRYVAVLDESEAHHRAALDGVGVALGRVTRARLLLESGQLVALSTQRLKTSWSHYLVYPPRSTTHGGFLAFRAWLQGQAREHAAHAQQLTTVPSAVRRRKRSRTLPP
>CP028127.1|AVQ08497.1|4336267_4337308_+|IS21-family-transposase
MLTVEEQVEIKILARQGMSIREISRQLQVSRNTVRRYLREVAAAQRKPRGVRPHKLDPYRSYIEQRVRAAYPAWLPATAIEQEIKLLGYRGGLSRLRQFMRSLRVIRPEEPLVRFETPAGQQLQCDWIVFRRGKHPLSAFVATLGWSRASYVEFVTDEKLETLLACHAHTFAFFGGVSRQVLYDNMKTVVLERDAYGPGEHRFQPAFLDFAGHYGFVPKLCRPYRAKTKGKVERFNGYLRRSFYNPLASKLAQDGLRLDADTANTAVLTWLRTTANARVHGTTGKVPQQQLQQERAALQGLPSPYLGQLPKAAPPTQAAAPDWERFPRQSLQHELSVYEHLFAEVQ
>CP028127.1|AVQ08498.1|4337307_4338108_+|transposase
MQLQHQRIFELCGQLKLEAVAAHYPELASKAVTNQLSFADFLEGLLKNEVTTRQGRSRHMLARVAGFPVIKTLEQFDFTAAHGTSKKAIQELSGLAFVERAENLVLLGPSGVGKTHLAISLGYLATQAGMKTRFVSAADLMVAMIAAQRQDRLADFIRRNVMGPRLLIIDEIGYLPMSRDQANLFFQVVAKRYEKGSMVLTSNLPFGQWDQAFAGDTTLTAALLDRLLHHAHVIQIKGESFRLKDKRKAGIIPSRQTAEHIEVGQI
>CP028127.1|AVQ08499.1|4339749_4340304_-|hypothetical-protein
MRITSVSSSLALALAGVLAVAGCKKADDDSVSKDPTSGAPTNAMPGPAATPPASDQAAQGSATGAASTDGGAATGSAVTVSSVAVGTQAAADKTVTPATSVGSKDTIIVSVKTDGSASNVALSAKLAYQDGQVAGEQNATLNTTGAETTNLSFSKPDGWPAGTYTAQVMVDGKLAGTPQTIIVK
>CP028127.1|AVQ08500.1|4340409_4340703_-|LysM-peptidoglycan-binding-domain-containing-protein
MSVDKKADFSNVTSSVDSTAAVTPAPDFSNVRTSVQSTAQRVEESVTVQAGDSLSSIAKRHLGDGNLWPRIFEANRETLQDPDKIFPGQVLRLPAKS
>CP028127.1|AVQ08501.1|4340803_4341619_-|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF
MNTPEDSTLGREVAYPSGYDPSLLFPIPRAAGREAIGLSGDLPFIGRDRWHAYELSWLDAQGKPCVATATLHVPCDSPALIESKSLKLYLNSLNATRFNSAEAVRTRIATDLSTRAGADVAVEFGLPPIDAVGEGELIDALDVSIDDYGPPNAAYLAAHAQPVVEEVLTSALLKSNCPVTGQPDWASVTLRYRGAPIDREGLLRYLVSFRDHAEFHEQCVERIFNDVLTQCAPEWLVVEARYTRRGGLDINPLRSSPSVPTPLSFFRDLRQ
>CP028127.1|AVQ08502.1|4341777_4343094_-|amidohydrolase
MRPSRLLTSALLLALPTLAAAQTAQRPEVQAAAAPLQAKVVQWRRNFHQHPELSNREERTAATVAAQLRKLGLKPRTGIAHHGVVAIIKGGKPGPMIALRADMDALPVKEQTGLPFASKATADYRGEQVGVMHACGHDAHTAILLGVAEALVGMRDQLPGEVMLIFQPSEEGAPGNEEGGASLMLKEGLFADFKPQAVFGLHVFSSVQAGKIAVRGGPLMAASDRFAIKMIGRQTHGSAPWNGIDPIVASADMIGAAQTVISRRANLSKQPAVLSFGAIKGGIRYNIIPDDVEMVGTIRTFDAGMRQQIFADLKNVAEHTAAAHGAKVEAQVPDQPGNPATVNDPALTAKMLPSLQAVVGADNVYEPPLQMGAEDFSFYAQQVPSMFFFVGSTAKGIDPATAPSNHSPQFLLDESSLDVGLRALLQVSLDYLHQGEAG
>CP028127.1|AVQ08503.1|4343352_4344597_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MSRFWKITPLVVAVFVVVFVAMRMMGGGNHGKRAGAPDGNDPDNSGPVPVTVVAASTQDVPVYASALGTVTALNTVTVSPQVGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVAANDAQMRSAQVQLQFTRVTAPIDGIAGIRGVDVGNIVSSSSTIVTLTQIRPIYVSFNLPERELQAVRTGQTAAPLAAAALDRGDAHVISSDGKLDVIDNRISADSGTFGARAIFANTDNALWPGQFVNVRLQLRTITGGTVVPTQSVQRGPDGDYVYVVGSDNTAQMRTVVQGVEVDDSHVQVTKGLKPGERVVTEGQFRLKPGSKVSALKPGETPPEPTEAELKAAKDKQSRAGGAGGRRGGGPR
>CP028127.1|AVQ08504.1|4344691_4347940_+|acriflavine-resistance-protein-B
MGFSTIFIRRPIATSLLMAGVLLLGILGYRQLPVSALPEIDAPSLVVTTQYPGANATTMASLVTTPLERQFGQISGLQMMTSDSSAGLSTIILQFSMERDIDIASQDVQAAIRQATLPSSLPYQPVYNRVNPADAAILTLKLTSDSLPLREINRYADAILAQRLSQVPGVGLVSIAGNVRPAVRIQVNPAQLSNMGLTMESLRSALTQTNVSAPKGSLNGKTQSYSIGTNDQLTDAAQYRETIISYKDGRPVRLADVANVVDGVENDQLAAWADGKQAVLLEIRRQPGANIVQTVEQIRNILPQLRSVLPADVHLEVFSDRTETIRASVHEVKFTLVLTIALVVAVIFVFLRRLWATIIPSVAVPLSLAGTFGVMAFAGMSLDNLSLMALVVATGFVVDDAIVMIENIVRYIEQGKSGPEAAEIGAKQIGFTVLSLTVSLVAVFLPLLLMPGVTGRLFHEFAWVLSIAVVISMLVSLTLTPMMCAYLLKPDALPEGEDAHERATAAGKRNLWTRTVGTYERSLDWVLAHQPLTLAVAIGAVALTVVLYVTIPKGLLPEQDTGLITGVVQADQNVAFPQMEQRTQAVAAALQKDPAVTGVAAFIGAGTMNPTLNQGQLSIVLKTRSDREGLDEVLPRLQKAVAGIPGVALFLKPVQDVTLDTRVAATEYQYSISDVDSSELATWAGRMTEAMRKLPELADVDNNLANQGRALELSIDRDKASMLGVPMQTIDDTLYDSFGQRQISTIFTELNQYRVVLEVAPEFRTSTALMNQLAVASNGSGALTGTNATSFGQVTSSNSSTATGVGAQNTGIVVGAGSIIPLAALAEAKVTNTPLVVSHQQQLPAVTISFNLAPGHSLSQAVAAIEKAREALKIPTQVHAQFVGKAAEFTGSQTDIVWLLLASIVVIYIVLGVLYESYIHPLTIISTLPPAGVGALLALMMCGLSLSVDGIVGIVLLIGIVKKNAIMMIDFAIDARREGANAHDAIRRACLLRFRPIMMTTAAAMLGALPLALGTGIGSELRRPLGIAIVGGLLLSQLVTLYTTPVIYLYMERGGERLRAWRARRAAQRDGITAASTSERSA
>CP028127.1|AVQ08505.1|4348055_4351184_+|AcrB/AcrD/AcrF-family-protein
MNISAPFIKRPIGTSLLAIGLFVIGLMCYLRLGVASLPNIQIPIIFVHATQSGADASTMASTVTAPLERHLGQLPGIDRMRSSSSESSSLVVLVFQSSRKIDSAAQDIQTAINASQSDLPSGLGTPMYSKANPNDDPVIAIALTSDTQSADELYNVADSLLAQRLRQITGISSVDIAGASTPAVRVDVDLRALNALGLTPDNLRNAVRAANVTSPTGFLSDGNTTMAIIANDSVSKAADFAQLAIATQSNGRIVRLGDVATVYDGQQDAYQAAWFNGKRAVVMYAFTRAGANIVETVDQVKAQIPELRSYLQPGTTLTPYFDRTPTIRASLHEVQVTLMISLAMVILTMALFLRRLAPTLIAAVAVPLSLAGSALVMYMLGFTLNNLSLLALVIAIGFVVDNAIVVIENVMRHLDEGMSRMDAALAGAREIGFTIVSITASLVAVFIPMLFASGMIGAFFREFTVTLVAAIVVSMLVSLTLTPALCSRFLSAHAEQEKPSRFGAWLDRMHHRMLRAYTVALDFSLRHALLLSLTPLLLIAATILLGSAVKKGSFPAQDTGLIWGRANSSATVSFADMVSRQRRITDMLMADPAVKTVGARLGSSRQGSSASFNIELKKRDEGRRDTTADVVARLSAKADRYPDLDLRLRAIQDLPSDGGGGTSQGAQYRVSLQGNDLAQLQEWLPKLQAALKKNPRLRDVGTDVDTSGLRQNIVIDRAKAARLGITVGAIDGALYGAFGQRSISTIYSDLNQYSVVVNALPSQTATPKALDQIFVPNRAGQMVPITAVATQVPGLAPPQIIHENQYTTMDLSYNLAPGVSTGEADLIIKSTVDGLRMPDGIRLSGDNSFNVQLSANSMGILLLAAVLTVYIVLGMLYESLIHPVTILSTLPAAGVGALLALFITNTELSVISMIALVLLIGIVKKNAIMMIDFALVAQRVHGMDARAAAREASIVRFRPIMMTTMVAILAAVPLAVGLGEGSELRRPLGIAMIGGLVFSQSLTLLSTPALYVIFSCLSERWKARRARRAERAAARRPAAQAH
>CP028127.1|AVQ08506.1|4352091_4352421_+|glyoxalase
MGFAFNPAYTDENATCLILGENVFTMLLVKPFFQGFSHKGICDTANATETITTLAVSSRAEVDALVSKARATGGRADGEAKDDGFMYQHGFADPDGHLWEVFHSSGAPG

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Crispr_ID: CP028127_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP028127_3

4338146-4339620

TypeI

I-C

Consensus_repeat	Method
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CRISPRCasFinder
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CRT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	PILER-CR

22 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of CP028127_3

>merge|CP028127|3|4338146-4339620|CRISPRCasFinder,CRT,PILER-CR
TGCTGTTGACAACGGGCGCGTGGATTGAAACCAGTGCCTATGCAGCGGCTGTATCAGCTTCGACGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACTATAACCCTGCCCCGGTTTTCGCCGATCTGCTAGGGTCGCGCCCTCACGGGCGCGTGGATTGAAACGAGATACGCGACATGATTGCGTGGGTGTACGGCTGTCGCGCCCTCACGGGCGCGTGGATTGAAACCAACGATACCCTTGGATCGCCAAGGTGATGATGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACAGCGACAGTGAGTACGCCAAGGCAGCGCAGTACCTGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTGCGCAAGCCGATGAAGGCGAACTCCACCCGGCGGTCGCGCCCTCACGGGCGCGTGGATTGAAACTGCGCAGTCAGGGGACACGATCGGGACTTTCGTTGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTGAACTTAAGAAGCAACTATTTAACCAATACATCGTCGCGCCCTCACGGGCGCGTGGATTGAAACAGCGAGTCCGAGATGTTTGCCAGGGTGGTGTTGAGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTGTTTGATCTTGCAGATTTGGAAATGTGGGATAGGTCGCGCCCTCACGGGCGCGTGGATTGAAAATTTCCATAACTTCGATGCTCTGGGGCGCTCTGCAAGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTGCCAAGGTAGTAAGCAACGGCGGCCGGGTTATCGTCGCGCCCTCACGGGCGCGTGGATTGAAACATCACTGGGCTGGCGGGAAAACCAGTCAATGGGTAGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTGCTGTGCACGTCGCTCAGCTGCAGCGACTGCCGTCGCGCCCTCACGGGCGCGTGGATTGAAACTCCGCCAGGGCGTCAATATCGGCCTGGGTAAACCGTCGCGCCCTCACGGGCGCGTGGATTGAAACGCGCTCCACGCGGTCACGCTCTGCCTGCTCAGCAGTCGCGCCCTCACGGGCGCGTGGATTGAAACATCACGTCATCCATCGCATCGATATAACGGGCCGGTCGCGCCCTCACGGGCGCGTGGATTGAAACGTTGATCAATATGGCTCGGCTGCGGAAATAGTGGATGGTCGCGCCCTCACGGGCGCGTGGATTGAAACAGGCACGAAGGCGCCCGGCGTAGCCTCGCGCTCAAGTCGCGCCCTCACGGGCGCGTGGATTGAAACCATACAGACCCTGCCCCCTCAATGCGCACTATATGTCGCGCCCTCACGGGCGCGTGGATTGAAACTGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGAGTCGCGCCCTGCCGGGCGCGTGGATTGAAACAACGGCCCGTTGATGATTCGGCACGTGGCGCAGGGTCGCGCCCTCACAGACGCGTAGATTGAAAC

>CP028127|3|2|4338146-4339620|CRISPRCasFinder
TGCTGTTGACAACGGGCGCGTGGATTGAAAC	CAGTGCCTATGCAGCGGCTGTATCAGCTTCGACGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TATAACCCTGCCCCGGTTTTCGCCGATCTGCTAGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GAGATACGCGACATGATTGCGTGGGTGTACGGCT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAACGATACCCTTGGATCGCCAAGGTGATGATGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGCGACAGTGAGTACGCCAAGGCAGCGCAGTACCT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGCGCAAGCCGATGAAGGCGAACTCCACCCGGCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCGCAGTCAGGGGACACGATCGGGACTTTCGTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGAACTTAAGAAGCAACTATTTAACCAATACATC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGCGAGTCCGAGATGTTTGCCAGGGTGGTGTTGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTGTTTGATCTTGCAGATTTGGAAATGTGGGATAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAA	TTTCCATAACTTCGATGCTCTGGGGCGCTCTGCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTGCCAAGGTAGTAAGCAACGGCGGCCGGGTTATC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATCACTGGGCTGGCGGGAAAACCAGTCAATGGGTA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGCTGTGCACGTCGCTCAGCTGCAGCGACTGCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCCGCCAGGGCGTCAATATCGGCCTGGGTAAACC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCGCTCCACGCGGTCACGCTCTGCCTGCTCAGCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATCACGTCATCCATCGCATCGATATAACGGGCCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTTGATCAATATGGCTCGGCTGCGGAAATAGTGGATG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGCACGAAGGCGCCCGGCGTAGCCTCGCGCTCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CATACAGACCCTGCCCCCTCAATGCGCACTATAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGA
GTCGCGCCCTGCCGGGCGCGTGGATTGAAAC	AACGGCCCGTTGATGATTCGGCACGTGGCGCAGG
GTCGCGCCCTCACAGACGCGTAGATTGAAAC

>CP028127|3|2|4338146-4339620|CRT
TGCTGTTGACAACGGGCGCGTGGATTGAAAC	CAGTGCCTATGCAGCGGCTGTATCAGCTTCGACGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TATAACCCTGCCCCGGTTTTCGCCGATCTGCTAGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GAGATACGCGACATGATTGCGTGGGTGTACGGCT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAACGATACCCTTGGATCGCCAAGGTGATGATGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGCGACAGTGAGTACGCCAAGGCAGCGCAGTACCT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGCGCAAGCCGATGAAGGCGAACTCCACCCGGCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCGCAGTCAGGGGACACGATCGGGACTTTCGTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGAACTTAAGAAGCAACTATTTAACCAATACATC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGCGAGTCCGAGATGTTTGCCAGGGTGGTGTTGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTGTTTGATCTTGCAGATTTGGAAATGTGGGATAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAA	TTTCCATAACTTCGATGCTCTGGGGCGCTCTGCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTGCCAAGGTAGTAAGCAACGGCGGCCGGGTTATC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATCACTGGGCTGGCGGGAAAACCAGTCAATGGGTA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGCTGTGCACGTCGCTCAGCTGCAGCGACTGCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCCGCCAGGGCGTCAATATCGGCCTGGGTAAACC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCGCTCCACGCGGTCACGCTCTGCCTGCTCAGCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATCACGTCATCCATCGCATCGATATAACGGGCCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTTGATCAATATGGCTCGGCTGCGGAAATAGTGGATG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGCACGAAGGCGCCCGGCGTAGCCTCGCGCTCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CATACAGACCCTGCCCCCTCAATGCGCACTATAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGA
GTCGCGCCCTGCCGGGCGCGTGGATTGAAAC	AACGGCCCGTTGATGATTCGGCACGTGGCGCAGG
GTCGCGCCCTCACAGACGCGTAGATTGAAAC

>CP028127|3|3|4338212-4339555|PILER-CR
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TATAACCCTGCCCCGGTTTTCGCCGATCTGCTAGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GAGATACGCGACATGATTGCGTGGGTGTACGGCT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAACGATACCCTTGGATCGCCAAGGTGATGATGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGCGACAGTGAGTACGCCAAGGCAGCGCAGTACCT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGCGCAAGCCGATGAAGGCGAACTCCACCCGGCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCGCAGTCAGGGGACACGATCGGGACTTTCGTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGAACTTAAGAAGCAACTATTTAACCAATACATC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGCGAGTCCGAGATGTTTGCCAGGGTGGTGTTGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTGTTTGATCTTGCAGATTTGGAAATGTGGGATAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAA	TTTCCATAACTTCGATGCTCTGGGGCGCTCTGCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTGCCAAGGTAGTAAGCAACGGCGGCCGGGTTATC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATCACTGGGCTGGCGGGAAAACCAGTCAATGGGTA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGCTGTGCACGTCGCTCAGCTGCAGCGACTGCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCCGCCAGGGCGTCAATATCGGCCTGGGTAAACC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCGCTCCACGCGGTCACGCTCTGCCTGCTCAGCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATCACGTCATCCATCGCATCGATATAACGGGCCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTTGATCAATATGGCTCGGCTGCGGAAATAGTGGATG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGCACGAAGGCGCCCGGCGTAGCCTCGCGCTCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CATACAGACCCTGCCCCCTCAATGCGCACTATAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGA
GTCGCGCCCTGCCGGGCGCGTGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP028127.1\|AVQ08497.1\|4336267_4337308_+\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
CP028127.1\|AVQ08489.1\|4323250_4324951_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227059
CP028127.1\|AVQ08490.1\|4325114_4327409_+\|CRISPR-associated-endonuclease-Cas3''	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
CP028127.1\|AVQ08499.1\|4339749_4340304_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236776
CP028127.1\|AVQ08508.1\|4353852_4354116_+\|hypothetical-protein	unknown	unknown	unknown
CP028127.1\|AVQ08506.1\|4352091_4352421_+\|glyoxalase	unknown	unknown	gnl\|CDD\|226134
CP028127.1\|AVQ08494.1\|4331304_4331937_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
CP028127.1\|AVQ08507.1\|4352467_4353835_-\|DUF1338-domain-containing-protein	unknown	unknown	gnl\|CDD\|319958
CP028127.1\|AVQ08500.1\|4340409_4340703_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|236880
CP028127.1\|AVQ08502.1\|4341777_4343094_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|349917
CP028127.1\|AVQ08498.1\|4337307_4338108_+\|transposase	unknown	unknown	gnl\|CDD\|181681
CP028127.1\|AVQ08495.1\|4331939_4332974_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
CP028127.1\|AVQ08505.1\|4348055_4351184_+\|AcrB/AcrD/AcrF-family-protein	unknown	unknown	gnl\|CDD\|223911
CP028127.1\|AVQ08503.1\|4343352_4344597_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|183194
CP028127.1\|AVQ08493.1\|4330406_4331285_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
CP028127.1\|AVQ08501.1\|4340803_4341619_-\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	unknown	unknown	gnl\|CDD\|236986
CP028127.1\|AVQ08504.1\|4344691_4347940_+\|acriflavine-resistance-protein-B	unknown	unknown	gnl\|CDD\|182501
CP028127.1\|AVQ08496.1\|4332989_4333280_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP028127.1\|AVQ08492.1\|4328565_4330410_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
CP028127.1\|AVQ08491.1\|4327894_4328569_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534

Protein	Function_ID	Function_description	E-value
CP028127.1\|AVQ08497.1\|4336267_4337308_+\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.72019e-49
CP028127.1\|AVQ08489.1\|4323250_4324951_+\|hypothetical-protein	gnl\|CDD\|227059	COG4715, COG4715, Uncharacterized conserved protein [Function unknown].	9.20415e-11
CP028127.1\|AVQ08490.1\|4325114_4327409_+\|CRISPR-associated-endonuclease-Cas3''	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	7.66289e-57
CP028127.1\|AVQ08499.1\|4339749_4340304_-\|hypothetical-protein	gnl\|CDD\|236776	PRK10856, PRK10856, cytoskeleton protein RodZ.	0.00121454
CP028127.1\|AVQ08506.1\|4352091_4352421_+\|glyoxalase	gnl\|CDD\|226134	COG3607, COG3607, Predicted lactoylglutathione lyase [General function prediction only].	3.92491e-37
CP028127.1\|AVQ08494.1\|4331304_4331937_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	2.35377e-44
CP028127.1\|AVQ08507.1\|4352467_4353835_-\|DUF1338-domain-containing-protein	gnl\|CDD\|319958	cd16348, VOC_YdcJ_like, uncharacterized metal-dependent enzyme similar to Shigella flexneri YdcJ. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	0
CP028127.1\|AVQ08500.1\|4340409_4340703_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|236880	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional.	1.26222e-25
CP028127.1\|AVQ08502.1\|4341777_4343094_-\|amidohydrolase	gnl\|CDD\|349917	cd05667, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily. Peptidase M20 family, uncharacterized subfamily of bacterial proteins that have been predicted as N-acyl-L-amino acid amidohydrolase (amaA), thermostable carboxypeptidase (cpsA-1, cpsA-2 in Sulfolobus solfataricus) and abgB (aminobenzoyl-glutamate utilization protein B), and generally are involved in the urea cycle and metabolism of amino groups. Aminoacylases 1 (ACY1s) comprise a class of zinc binding homodimeric enzymes involved in the hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and is a highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. ACY1 breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	0
CP028127.1\|AVQ08498.1\|4337307_4338108_+\|transposase	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	2.48298e-158
CP028127.1\|AVQ08495.1\|4331939_4332974_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
CP028127.1\|AVQ08505.1\|4348055_4351184_+\|AcrB/AcrD/AcrF-family-protein	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
CP028127.1\|AVQ08503.1\|4343352_4344597_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|183194	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit.	1.5907e-93
CP028127.1\|AVQ08493.1\|4330406_4331285_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	2.06054e-155
CP028127.1\|AVQ08501.1\|4340803_4341619_-\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	gnl\|CDD\|236986	PRK11792, queF, 7-cyano-7-deazaguanine reductase; Provisional.	6.68825e-174
CP028127.1\|AVQ08504.1\|4344691_4347940_+\|acriflavine-resistance-protein-B	gnl\|CDD\|182501	PRK10503, PRK10503, MdtB/MuxB family multidrug efflux RND transporter permease subunit.	0
CP028127.1\|AVQ08496.1\|4332989_4333280_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.02577e-32
CP028127.1\|AVQ08492.1\|4328565_4330410_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
CP028127.1\|AVQ08491.1\|4327894_4328569_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.72681e-123

>CP028127.1|AVQ08498.1|4337307_4338108_+|transposase
MQLQHQRIFELCGQLKLEAVAAHYPELASKAVTNQLSFADFLEGLLKNEVTTRQGRSRHMLARVAGFPVIKTLEQFDFTAAHGTSKKAIQELSGLAFVERAENLVLLGPSGVGKTHLAISLGYLATQAGMKTRFVSAADLMVAMIAAQRQDRLADFIRRNVMGPRLLIIDEIGYLPMSRDQANLFFQVVAKRYEKGSMVLTSNLPFGQWDQAFAGDTTLTAALLDRLLHHAHVIQIKGESFRLKDKRKAGIIPSRQTAEHIEVGQI
>CP028127.1|AVQ08497.1|4336267_4337308_+|IS21-family-transposase
MLTVEEQVEIKILARQGMSIREISRQLQVSRNTVRRYLREVAAAQRKPRGVRPHKLDPYRSYIEQRVRAAYPAWLPATAIEQEIKLLGYRGGLSRLRQFMRSLRVIRPEEPLVRFETPAGQQLQCDWIVFRRGKHPLSAFVATLGWSRASYVEFVTDEKLETLLACHAHTFAFFGGVSRQVLYDNMKTVVLERDAYGPGEHRFQPAFLDFAGHYGFVPKLCRPYRAKTKGKVERFNGYLRRSFYNPLASKLAQDGLRLDADTANTAVLTWLRTTANARVHGTTGKVPQQQLQQERAALQGLPSPYLGQLPKAAPPTQAAAPDWERFPRQSLQHELSVYEHLFAEVQ
>CP028127.1|AVQ08496.1|4332989_4333280_+|CRISPR-associated-endonuclease-Cas2
MMILVSYDVSTSSPGGEKRLRKVAKACRDRGQRVQFSVFEIEVEPAQWTELRQQLCDLIDPALDSLRFYHLGAKWETRVEHIGAKPSLNLKGPLIF
>CP028127.1|AVQ08495.1|4331939_4332974_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MRRQLNTLYVTTDGAWLHKDGANVVLNVERQERTRLPVHMLESIVCIGRVGVSPQLLGFCAEQGISICYLTPQGRFLARVEGPVSGNVLLRREQYRCSDDPVRCAAIVRHLLAGKIHNQRAVLARGWRDHGERMIDIPAFQHALKRLKRIPQRLLIETSVDVLRGLEGEAAQSYFGVFGQLVRTEAPLLRFGGRNRRPPRDAFNALLSFLYTLLTHDCRSALETVGLDPAVGFLHRDRPGRPSLALDLAEEFRPLLGERLALSLINRRQLNERDFQVFDNGAVLLKDDARKTVLIAYQERKREQLQHAFLGEKIDIGLLPFVQAQLMARHLRGDLDGYPSFFWK
>CP028127.1|AVQ08494.1|4331304_4331937_+|CRISPR-associated-protein-Cas4
MDDDDLIPLSALQHYLYCPRQCALIHVERQWAENRHTAEGRLLHERADVAHTQRRRGVRTVTAMPLLALELGITGKADVVEFHHDPAGEFAFPVEYKRGRPKSHRADEVQLCAQALCLESMLKRPVDAGALFYGQTRRRKDVVFDPALRELTQRTIAETRALLSHGLTPGARYDSKRCDACSLIDLCQPRLLGCGSVDTWLRRQLDAEEE
>CP028127.1|AVQ08493.1|4330406_4331285_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSAIAHRYEFVYLFDVTNGNPNGDPDAGNLPRLDPETNRGLVTDVALKRKIRNYVALEQEGQPGHAIYMREKSVLNSQHELAWKALNIPPDEKEKYKKLPKDQAKAQELTSWMCSNFFDVRTFGAVMTTEINTGQVRGPVQLAFATSVEPVLPLEVSITRMAVTNEKDLEKERTMGRKHILPYGLYRAHGFVSAKLAERTGFSEEDLQLLWRALTNLFEHDRSAARGEMAARKLIVFEHEHPMGNAPAHVLFDKVKVERIDQADQGPARSFSDYRVVIDHALPAGVSVTELF
>CP028127.1|AVQ08492.1|4328565_4330410_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILSALADYYHRLLDDPTSGIAAPGYSQEKIGYAIVLDGGGRVVAVEDEHDYEGKKRIPKSVSVPASFKRPGIGTNPFFLWDKTSYALGVSASSKRSAQEHAAFKTLHQQALGGSEDPGLRALLTFLDTWSPAQFADHPQFSRYGEALLDTNLVFRLAGDTGYLHQRAAARAAWERLQGQSADGVSGICLISGHFAPLARLHPPVKGVNGAQSSGASIVSFNLDAFTSYGKNQGENAPISEQATFAYTTALNHLLRRDPRNRQRLQIGDSTVVFWAQARTTAHAEEAEDLIADFLRGGKTEGPGIADGQATQRLHLALEQVRQARPLREMDDALDDEARIFVLGLAPNASRLSIRFWETQTLAGFAARLAAHYQDLTLEPPAWKRPPTPQFLALQTAPVYGEHSKPKAEDVSPLLAGEVTRAILAGTRYPRSLLGGIVMRFRADGQVNPLRVALCRAVLAREARLNTQQGLSSTKGEPPVSLDTANTDPGYLLGRLFSSLENLQRTALGGQVNATIRDRYYGAASATPASIFPVLLRNAQNHFGKLRKDKAGLAVNLEKEVGKIIDALPASFPRSLPIHEQGRFAIGYYHQTQARFARNNGQDAPDTASEGEPA
>CP028127.1|AVQ08491.1|4327894_4328569_+|type-I-C-CRISPR-associated-protein-Cas5
MSYGVKLHVWGERALFTRPEMKVERVSYDIITPSAARGILEAIHWKPAIRWVVDSIQVLKPIRFESIRRNEVGGKLSAASVSKAIKAGRTDMLVSYVEEDRQQRAATLLREVGYVIAAHFELTDKAGADDNVGKHLDIFNRRARRGQCFQAPCLGTREFPASFALIEDDAAMPAADATLAGERDLGWMLHDIDFADGMTPRFFRARMVDGRVEVPAPENGGVRA
>CP028127.1|AVQ08490.1|4325114_4327409_+|CRISPR-associated-endonuclease-Cas3''
MELFAHSSKRQDRSDWQRLADHLFAVGERAARNAAPFGGQLLAGLAGQLHDLGKYTQKFQARLDGDPARVDHATWGARIACERYGTAGTLLAYGIAGHHAGLADGRPGHAAQSRPSLHERLSEDYRERELPPLLSDWERELSLPAKLALPDGFIGHPRQERRPFQLTVLTRMIFSCLVDADFTDTGDFYRRLEGRQSRAEETGTRPILPELRQCLDAHLATLPTKGGINPLRAQILSEVRAKAGMRPGLFSLTVPTGGGKTLASLGFALDHAIAHGLRRVIYVIPFTSIVEQTVQVFRHALGVQERDDIVLEHHSAFFDDPTKAPQSIDKRKLAMENWDAPIVVTTAVQFFESLFADRPSRCRKLHNIAGSVVVLDEAQTLPHALLRPCVALLDELARNYRVSPVLCTATQPTLRLDQGFAGGLDHVRELVDDPPALYARLRRVQVRHVGTLDDAALTDHLRQREQVLCIVNNRRHARHLFDAIADRPGARHLTTLMHARHRSAVLAELREDLKAGRPCRLVATSLIEAGVDVDFPTVLRAEAGLDSIAQAAGRCNREGLRPVEVSQVQVFAPANPDWAPPKELDLFAEVFRGIERTHRNDLLAMTAVADYFAALYRRLGDGRLDREDVLGLLRDADIKGLPLDTLARKFKMIQTTMRPLIVPYAPYAEGCDKEVPEVADILRQLEHAEHVGVAGAARRLQPWLVQVPEQAYRALWQANAIAPVAQARYGEQFVRLVNPRLYDPRCGLRWDDSPQFLAAEALVY
>CP028127.1|AVQ08489.1|4323250_4324951_+|hypothetical-protein
MTARFSPADLDRSFLLGITTPSYYARGLVYADQERVTLQTVEPLRVDAIVSGSDDYAVELVWRNGSLRGRCDCPIGQQAEFCKHQVAVALSWARTSADPNSQKRTKRTTAGMPVAESSDRVLQHWLSTLTPQALQALILESADNDAQLRKRLLSQAQLAVAPLQQWRKAISTLLGRKRYMDWSATIAYSKRLSVLPSLLEQARQRDPLAALDLHEYAFKRLLAIYEQVDDSRGDLGERLRVLGHAHLEAARAAGTATLGDRLFKLRMLDQWSLLRPLQDYAALLSATDIARLQHAALEILHARGNRARRLSAESLLEDTARCGGNVDAMLEFFAHTCSSGWDHLEMARRCGEYGRQRQALEWLERGVKADPQDGRLLAALATAYVRDGFPEDALTLRWKAYLLMPNEETYLALQEAASLLDAWEAWRERALQALDTKAVPRFIDAHDTRISLLLAEGQIQRALELAADQTRKLPLGTWERLLPAAETCDPAAALRICHTMIGMHIERTDRQGYVAAIRLLPTLQRLYQQQGGQGHAAFDAELARLRQQYRVKRAFIELLHKRFPAP
>CP028127.1|AVQ08499.1|4339749_4340304_-|hypothetical-protein
MRITSVSSSLALALAGVLAVAGCKKADDDSVSKDPTSGAPTNAMPGPAATPPASDQAAQGSATGAASTDGGAATGSAVTVSSVAVGTQAAADKTVTPATSVGSKDTIIVSVKTDGSASNVALSAKLAYQDGQVAGEQNATLNTTGAETTNLSFSKPDGWPAGTYTAQVMVDGKLAGTPQTIIVK
>CP028127.1|AVQ08500.1|4340409_4340703_-|LysM-peptidoglycan-binding-domain-containing-protein
MSVDKKADFSNVTSSVDSTAAVTPAPDFSNVRTSVQSTAQRVEESVTVQAGDSLSSIAKRHLGDGNLWPRIFEANRETLQDPDKIFPGQVLRLPAKS
>CP028127.1|AVQ08501.1|4340803_4341619_-|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF
MNTPEDSTLGREVAYPSGYDPSLLFPIPRAAGREAIGLSGDLPFIGRDRWHAYELSWLDAQGKPCVATATLHVPCDSPALIESKSLKLYLNSLNATRFNSAEAVRTRIATDLSTRAGADVAVEFGLPPIDAVGEGELIDALDVSIDDYGPPNAAYLAAHAQPVVEEVLTSALLKSNCPVTGQPDWASVTLRYRGAPIDREGLLRYLVSFRDHAEFHEQCVERIFNDVLTQCAPEWLVVEARYTRRGGLDINPLRSSPSVPTPLSFFRDLRQ
>CP028127.1|AVQ08502.1|4341777_4343094_-|amidohydrolase
MRPSRLLTSALLLALPTLAAAQTAQRPEVQAAAAPLQAKVVQWRRNFHQHPELSNREERTAATVAAQLRKLGLKPRTGIAHHGVVAIIKGGKPGPMIALRADMDALPVKEQTGLPFASKATADYRGEQVGVMHACGHDAHTAILLGVAEALVGMRDQLPGEVMLIFQPSEEGAPGNEEGGASLMLKEGLFADFKPQAVFGLHVFSSVQAGKIAVRGGPLMAASDRFAIKMIGRQTHGSAPWNGIDPIVASADMIGAAQTVISRRANLSKQPAVLSFGAIKGGIRYNIIPDDVEMVGTIRTFDAGMRQQIFADLKNVAEHTAAAHGAKVEAQVPDQPGNPATVNDPALTAKMLPSLQAVVGADNVYEPPLQMGAEDFSFYAQQVPSMFFFVGSTAKGIDPATAPSNHSPQFLLDESSLDVGLRALLQVSLDYLHQGEAG
>CP028127.1|AVQ08503.1|4343352_4344597_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MSRFWKITPLVVAVFVVVFVAMRMMGGGNHGKRAGAPDGNDPDNSGPVPVTVVAASTQDVPVYASALGTVTALNTVTVSPQVGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVAANDAQMRSAQVQLQFTRVTAPIDGIAGIRGVDVGNIVSSSSTIVTLTQIRPIYVSFNLPERELQAVRTGQTAAPLAAAALDRGDAHVISSDGKLDVIDNRISADSGTFGARAIFANTDNALWPGQFVNVRLQLRTITGGTVVPTQSVQRGPDGDYVYVVGSDNTAQMRTVVQGVEVDDSHVQVTKGLKPGERVVTEGQFRLKPGSKVSALKPGETPPEPTEAELKAAKDKQSRAGGAGGRRGGGPR
>CP028127.1|AVQ08504.1|4344691_4347940_+|acriflavine-resistance-protein-B
MGFSTIFIRRPIATSLLMAGVLLLGILGYRQLPVSALPEIDAPSLVVTTQYPGANATTMASLVTTPLERQFGQISGLQMMTSDSSAGLSTIILQFSMERDIDIASQDVQAAIRQATLPSSLPYQPVYNRVNPADAAILTLKLTSDSLPLREINRYADAILAQRLSQVPGVGLVSIAGNVRPAVRIQVNPAQLSNMGLTMESLRSALTQTNVSAPKGSLNGKTQSYSIGTNDQLTDAAQYRETIISYKDGRPVRLADVANVVDGVENDQLAAWADGKQAVLLEIRRQPGANIVQTVEQIRNILPQLRSVLPADVHLEVFSDRTETIRASVHEVKFTLVLTIALVVAVIFVFLRRLWATIIPSVAVPLSLAGTFGVMAFAGMSLDNLSLMALVVATGFVVDDAIVMIENIVRYIEQGKSGPEAAEIGAKQIGFTVLSLTVSLVAVFLPLLLMPGVTGRLFHEFAWVLSIAVVISMLVSLTLTPMMCAYLLKPDALPEGEDAHERATAAGKRNLWTRTVGTYERSLDWVLAHQPLTLAVAIGAVALTVVLYVTIPKGLLPEQDTGLITGVVQADQNVAFPQMEQRTQAVAAALQKDPAVTGVAAFIGAGTMNPTLNQGQLSIVLKTRSDREGLDEVLPRLQKAVAGIPGVALFLKPVQDVTLDTRVAATEYQYSISDVDSSELATWAGRMTEAMRKLPELADVDNNLANQGRALELSIDRDKASMLGVPMQTIDDTLYDSFGQRQISTIFTELNQYRVVLEVAPEFRTSTALMNQLAVASNGSGALTGTNATSFGQVTSSNSSTATGVGAQNTGIVVGAGSIIPLAALAEAKVTNTPLVVSHQQQLPAVTISFNLAPGHSLSQAVAAIEKAREALKIPTQVHAQFVGKAAEFTGSQTDIVWLLLASIVVIYIVLGVLYESYIHPLTIISTLPPAGVGALLALMMCGLSLSVDGIVGIVLLIGIVKKNAIMMIDFAIDARREGANAHDAIRRACLLRFRPIMMTTAAAMLGALPLALGTGIGSELRRPLGIAIVGGLLLSQLVTLYTTPVIYLYMERGGERLRAWRARRAAQRDGITAASTSERSA
>CP028127.1|AVQ08505.1|4348055_4351184_+|AcrB/AcrD/AcrF-family-protein
MNISAPFIKRPIGTSLLAIGLFVIGLMCYLRLGVASLPNIQIPIIFVHATQSGADASTMASTVTAPLERHLGQLPGIDRMRSSSSESSSLVVLVFQSSRKIDSAAQDIQTAINASQSDLPSGLGTPMYSKANPNDDPVIAIALTSDTQSADELYNVADSLLAQRLRQITGISSVDIAGASTPAVRVDVDLRALNALGLTPDNLRNAVRAANVTSPTGFLSDGNTTMAIIANDSVSKAADFAQLAIATQSNGRIVRLGDVATVYDGQQDAYQAAWFNGKRAVVMYAFTRAGANIVETVDQVKAQIPELRSYLQPGTTLTPYFDRTPTIRASLHEVQVTLMISLAMVILTMALFLRRLAPTLIAAVAVPLSLAGSALVMYMLGFTLNNLSLLALVIAIGFVVDNAIVVIENVMRHLDEGMSRMDAALAGAREIGFTIVSITASLVAVFIPMLFASGMIGAFFREFTVTLVAAIVVSMLVSLTLTPALCSRFLSAHAEQEKPSRFGAWLDRMHHRMLRAYTVALDFSLRHALLLSLTPLLLIAATILLGSAVKKGSFPAQDTGLIWGRANSSATVSFADMVSRQRRITDMLMADPAVKTVGARLGSSRQGSSASFNIELKKRDEGRRDTTADVVARLSAKADRYPDLDLRLRAIQDLPSDGGGGTSQGAQYRVSLQGNDLAQLQEWLPKLQAALKKNPRLRDVGTDVDTSGLRQNIVIDRAKAARLGITVGAIDGALYGAFGQRSISTIYSDLNQYSVVVNALPSQTATPKALDQIFVPNRAGQMVPITAVATQVPGLAPPQIIHENQYTTMDLSYNLAPGVSTGEADLIIKSTVDGLRMPDGIRLSGDNSFNVQLSANSMGILLLAAVLTVYIVLGMLYESLIHPVTILSTLPAAGVGALLALFITNTELSVISMIALVLLIGIVKKNAIMMIDFALVAQRVHGMDARAAAREASIVRFRPIMMTTMVAILAAVPLAVGLGEGSELRRPLGIAMIGGLVFSQSLTLLSTPALYVIFSCLSERWKARRARRAERAAARRPAAQAH
>CP028127.1|AVQ08506.1|4352091_4352421_+|glyoxalase
MGFAFNPAYTDENATCLILGENVFTMLLVKPFFQGFSHKGICDTANATETITTLAVSSRAEVDALVSKARATGGRADGEAKDDGFMYQHGFADPDGHLWEVFHSSGAPG
>CP028127.1|AVQ08507.1|4352467_4353835_-|DUF1338-domain-containing-protein
MRDTAFVSPDQIRSWFAQAMSDMYRTEVPLYGDLMSLVAQVNAQTLQADPALAARLQRNDERARLDLERHGAIRVGTAAELATLRRLFAVMGMQPVGYYDLSVAGVPVHSTAFRPIDEAALSANPFRVFTSLLRLELIEDATLRAQAEQILQQRQIFTAGALQLIECYAQQGGLDAGQAKQFVAEALETFRWHGDATVSLPTYRALSEAHKLIADVVSFHGPHINHLTPRTLDIDAAQEQMQRAGINAKAVIEGPPRRRVPILLRQTSFKALEEPVRFVGDDGQPEHGTHTARFGEIEQRGLALTPKGRALYDALLAQARDADGAGSTGTDYATRLQTAFVAFPDDEALLRQEGLGYFRYALTDAGRADPAQVAAMPAETAIALGLVSADPIIYEDFLPVSAAGIFQSNLGGAEQRAYAAHSSKRSFEQALGAQVHDEFALYAQLERESLQGLLV
>CP028127.1|AVQ08508.1|4353852_4354116_+|hypothetical-protein
MPAEASVVAFSPTSPCAGQLHGSIAGHLLARRQPRNTGVRVRVPLDATRARVRARPAPPPRPLRWPGALLPDAAQHRRADAAARRPG

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Crispr_ID: CP028127_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP028127_4

4813327-4813432

Orphan

Consensus_repeat	Method
GGGCACCTTCTCCCGATGGGAGAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP028127_4

>merge|CP028127|4|4813327-4813432|CRISPRCasFinder
GGGCACCTTCTCCCGATGGGAGAAGGATTGGTTTTGTTCCTGCTGCATGAGGCTGCGCCCGTAGCCTCATGCGCCCCTTTGGGCACCTTCTCCCGATGGGAGAAGG

>CP028127|4|3|4813327-4813432|CRISPRCasFinder
GGGCACCTTCTCCCGATGGGAGAAGG	ATTGGTTTTGTTCCTGCTGCATGAGGCTGCGCCCGTAGCCTCATGCGCCCCTTT
GGGCACCTTCTCCCGATGGGAGAAGG

Protein	Signature genes	Signature genes Name	Protein_function
CP028127.1\|AVQ08845.1\|4817885_4821902_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|227250
CP028127.1\|AVQ08847.1\|4822867_4824337_-\|DUF3375-domain-containing-protein	unknown	unknown	gnl\|CDD\|371764
CP028127.1\|AVQ08837.1\|4798988_4800092_-\|DUF4380-domain-containing-protein	unknown	unknown	gnl\|CDD\|373010
CP028127.1\|AVQ08850.1\|4825629_4825848_+\|DUF1656-domain-containing-protein	unknown	unknown	gnl\|CDD\|377931
CP028127.1\|AVQ09258.1\|4809274_4811152_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|226702
CP028127.1\|AVQ08849.1\|4825087_4825540_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|179596
CP028127.1\|AVQ08848.1\|4824356_4824986_-\|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl\|CDD\|236472
CP028127.1\|AVQ08842.1\|4815828_4816035_-\|hypothetical-protein	unknown	unknown	unknown
CP028127.1\|AVQ08844.1\|4816988_4817810_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182593
CP028127.1\|AVQ08841.1\|4813489_4815652_-\|lytic-murein-transglycosylase	unknown	unknown	gnl\|CDD\|274067
CP028127.1\|AVQ08840.1\|4811868_4813134_-\|tetracycline-resistance-MFS-efflux-pump	unknown	unknown	gnl\|CDD\|340946
CP028127.1\|AVQ08843.1\|4816253_4816643_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235261
CP028127.1\|AVQ08834.1\|4792632_4794609_-\|DNA-helicase-Rep	unknown	unknown	gnl\|CDD\|130146
CP028127.1\|AVQ09257.1\|4797318_4798920_-\|glucan-biosynthesis-protein-D	unknown	unknown	gnl\|CDD\|237327
CP028127.1\|AVQ08833.1\|4791989_4792544_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
CP028127.1\|AVQ08836.1\|4795907_4797152_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP028127.1\|AVQ08846.1\|4822176_4822881_-\|DUF4194-domain-containing-protein	unknown	unknown	gnl\|CDD\|372745
CP028127.1\|AVQ08838.1\|4800637_4801453_-\|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	unknown	unknown	gnl\|CDD\|234899
CP028127.1\|AVQ08839.1\|4811175_4811769_-\|biliverdin-producing-heme-oxygenase	unknown	unknown	gnl\|CDD\|350857
CP028127.1\|AVQ08835.1\|4794817_4795447_+\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272

Protein	Function_ID	Function_description	E-value
CP028127.1\|AVQ08845.1\|4817885_4821902_-\|ATP-binding-protein	gnl\|CDD\|227250	COG4913, COG4913, Uncharacterized protein conserved in bacteria [Function unknown].	6.13019e-178
CP028127.1\|AVQ08847.1\|4822867_4824337_-\|DUF3375-domain-containing-protein	gnl\|CDD\|371764	pfam11855, DUF3375, Protein of unknown function (DUF3375). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 479 to 499 amino acids in length.	4.66205e-147
CP028127.1\|AVQ08837.1\|4798988_4800092_-\|DUF4380-domain-containing-protein	gnl\|CDD\|373010	pfam14315, DUF4380, Domain of unknown function (DUF4380). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 288 and 372 amino acids in length. There are two completely conserved residues (G and E) that may be functionally important.	6.8486e-146
CP028127.1\|AVQ08850.1\|4825629_4825848_+\|DUF1656-domain-containing-protein	gnl\|CDD\|377931	pfam07869, DUF1656, Protein of unknown function (DUF1656). This family contains bacterial proteins, many of which are hypothetical. Some proteins in this family are putative membrane proteins.	7.86784e-12
CP028127.1\|AVQ09258.1\|4809274_4811152_-\|PAS-domain-containing-protein	gnl\|CDD\|226702	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].	1.28416e-125
CP028127.1\|AVQ08849.1\|4825087_4825540_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|179596	PRK03573, PRK03573, transcriptional regulator SlyA; Provisional.	1.45121e-13
CP028127.1\|AVQ08848.1\|4824356_4824986_-\|GTP-cyclohydrolase-I-FolE	gnl\|CDD\|236472	PRK09347, folE, GTP cyclohydrolase I; Provisional.	2.65767e-110
CP028127.1\|AVQ08846.1\|4822176_4822881_-\|DUF4194-domain-containing-protein	gnl\|CDD\|372745	pfam13835, DUF4194, Domain of unknown function (DUF4194).	4.09281e-45
CP028127.1\|AVQ08844.1\|4816988_4817810_+\|hypothetical-protein	gnl\|CDD\|182593	PRK10621, PRK10621, hypothetical protein; Provisional.	5.76412e-36
CP028127.1\|AVQ08841.1\|4813489_4815652_-\|lytic-murein-transglycosylase	gnl\|CDD\|274067	TIGR02283, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase. Members of this family are closely related to the MltB family lytic murein transglycosylases described by TIGR02282 and are likewise all proteobacterial, although that family and this one form clearly distinct clades. Several species have one member of each family. Many members of this family (unlike the MltB family) contain an additional C-terminal domain, a putative peptidoglycan binding domain (pfam01471), not included in region described by this model. Many sequences appear to contain N-terminal lipoprotein attachment sites, as does E. coli MltB in TIGR02282. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	5.43586e-138
CP028127.1\|AVQ08840.1\|4811868_4813134_-\|tetracycline-resistance-MFS-efflux-pump	gnl\|CDD\|340946	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.92711e-130
CP028127.1\|AVQ08843.1\|4816253_4816643_-\|hypothetical-protein	gnl\|CDD\|235261	PRK04233, PRK04233, hypothetical protein; Provisional.	2.25933e-81
CP028127.1\|AVQ08834.1\|4792632_4794609_-\|DNA-helicase-Rep	gnl\|CDD\|130146	TIGR01074, ATP-dependent_DNA_helicase_Rep, ATP-dependent DNA helicase Rep. Designed to identify rep members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
CP028127.1\|AVQ09257.1\|4797318_4798920_-\|glucan-biosynthesis-protein-D	gnl\|CDD\|237327	PRK13273, mdoD, glucan biosynthesis protein D; Provisional.	0
CP028127.1\|AVQ08833.1\|4791989_4792544_-\|N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	4.32467e-30
CP028127.1\|AVQ08836.1\|4795907_4797152_+\|histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.12595e-22
CP028127.1\|AVQ08838.1\|4800637_4801453_-\|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	gnl\|CDD\|234899	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase.	1.63773e-159
CP028127.1\|AVQ08839.1\|4811175_4811769_-\|biliverdin-producing-heme-oxygenase	gnl\|CDD\|350857	cd19166, HemeO-bac, heme oxygenase found in pathogenic bacteria. This subfamily contains bacterial heme oxygenase (HO, EC 1.14.14.18), where HO is part of a pathway for iron acquisition from host heme and heme products. Most of these proteins have yet to be characterized. HO catalyzes the rate limiting step in the degradation of heme to biliverdin in a multi-step reaction. HO is essential for recycling of iron from heme which is used as a substrate and cofactor for its own degradation to biliverdin, iron, and carbon monoxide. This family includes heme oxygenase (pa-HO) from Pseudomonas aeruginosa, an opportunistic pathogen that causes a variety of systemic infections, particularly in those afflicted with cystic fibrosis, as well as cancer and AIDS patients who are immunosuppressed. Pa-HO, expressed by the PigA gene, is critical for the acquisition of host iron since there is essentially no free iron in mammals, and is unusual since it hydroxylates heme predominantly at the delta-meso heme carbon, while all other well-studied HOs hydroxylate the alpha-meso carbon. Also included in this family is Neisseria meningitidis HO which is substantially different from the human HO, with the reaction product being ferric biliverdin IXalpha rather than reduced iron and free biliverdin IXalpha. HO shares tertiary structure similarity to methane monooxygenase (EC 1.14.13.25), ribonucleotide reductase (EC 1.17.4.1) and thiaminase II (EC 3.5.99.2), but shares little sequence homology.	4.8623e-44
CP028127.1\|AVQ08835.1\|4794817_4795447_+\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	1.77397e-107

>CP028127.1|AVQ08840.1|4811868_4813134_-|tetracycline-resistance-MFS-efflux-pump
MSLSPDSAPIPGRRRAALIFIFITVLIDVLSFGVIIPVLPDLVRHFTGGDYVVAAGWIGWFGFLFAAIQFVCSPLQGALSDRFGRRPVILLSCLGLGLDFILMAIAHSLPMLLLARVISGVCSASFSTANAYIADVTPADKRAGAFGMLGAAFGIGFVAGPLIGGWLGSMGLRWPFWFAAGLALLNVLYGWFVLPESLPVERRTARLEWSHANPLGALKLLRRYPQVFGLASVVFLANLAHYVYPSIFVLFAGYQYHWGPREVSWVLAGVGVCSIIVNVLLVGRLVRWLGERRALLLGLGCGVIGFVIYGLADSGAAFLIGVPISALWALAAPSAQALITREVGADAQGRVQGALTGLVSLAGIAGPLLFANVFAWFIGSGAPLHLPGAPWLLAGVLLAAGWAMAWRRAGRGAGTAPAAQA
>CP028127.1|AVQ08839.1|4811175_4811769_-|biliverdin-producing-heme-oxygenase
MPSHALAVPPSAALALRHATQDAHRLVEAVPLMQALGQGQIDSAAYAQILRRHHGLLAGFEAQLSDWLTTLVGNGWHYRRRVPALREDLRALGQQPDLPVALPSVADDAARWGMLYVIEGSQLGGRMIARSVRKQQPALAGALRYFELADDDPAGWRRFQAALDRRLDTPSARDAAIDGAQAMFAHFHTCLAAEPHP
>CP028127.1|AVQ09258.1|4809274_4811152_-|PAS-domain-containing-protein
MDVCAREPIHIPGLIQPYGVLLVIEPADGRIVQASSTAAELLGVPMDALLGMAYTQVLELPDAQPYAVDDQPQHLLHADVRFPQRSAPTDHPWVAAWHLYPEQWLIEIEPRDARLMDVTLREALPLLRSIERDAGIDEAAVRAAKGLRSMIGFDRVMVYRFDEEWNGDVIAEARQPELEAYLGLHYPASDIPAQARALYLRNRVRQIADVRYQPSPIQPTLHPRLGTPVDLSDVSLRSVSPVHLEYLANMGVSATLVSSIVVNDALWGLISCHHYSPHFTSHAMRDATDAVTRALAGRIGALQAVGRARLESVLLTIREKLITDFNDAEHLTVDMLADMAPDLMDVVDADGVAIFHGNEISRHGSVPDAEALRRIREHLESEHHDALREDAVGALHVDAIGEVFPDLADLAPLAAGFIFVPLMPQSRSALLWTRREQVQQVKWAGNPQLAKLQDIPNSRLSPRKSFDLWQQTVRGRARRWSPLHLESARSLRVLIELMERKRFQQDFTLLEASLSRLRDGVAIIERGANAAAHRLMFVNPAFAELSQTEVADLIGCDILALLADDAARGKVELLEDALRLGRAAYVTLPLRTQDGEPAYRQFHLEPLPSPSGVTAHWLLQLRDPE
>CP028127.1|AVQ08838.1|4800637_4801453_-|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase
MPELPEVETTLRGLSPHLVAQRIHGVILRRPDLRWPIPEQIERLLPGAIITNVRRRAKYLLIDTDAGGSALLHLGMSGSLRVLPGDTLPRSHDHVDISLQNGRVLRFNDPRRFGCLLWQSDTQAHELLAALGPEPLSDAFTGDYLHALAYGRRAAVKTFLMDQAVVVGVGNIYAAESLHRAGISPLREAGKVSLDRYRRLADAVKDILAYAIQRGGTTLRDFISPDGAPGYFEQELTVYGREGEPCKQCGRLLKHATIGQRATVWCGSCQR
>CP028127.1|AVQ08837.1|4798988_4800092_-|DUF4380-domain-containing-protein
MSSSPKRVIPLMVTGAVALLCMTSSGAVTPAPAHAAAAERIRLNSKEVELSATPAFGGRVLSFNLRGQPNVLKVGAAVKQQPAPEVSATSGDIPYFGHDVWVGPQSQWWLHQQLNHERQAAAAVWPPDPYLSLAQTQVTLQGHDALGFEGVPSPLTGVQLRKQVKLSAARADTVEIHASARNIRTQPIAWDLWFNTRVAATTRVFVPVAAAADIRVQPPSEAGTTAPRFKLKRGVFALRADARQDGLIQRGKLLLQPSAGWMAGFAGGQVLVIRFAHQPLAAIHPEQGQVELYLDAPPQHPEQGLLEMEVHAPYRQLAPGAQMQAQEQWTLLRYTGPNEEQAQRQFLCGKTKTLALANACDGPSAPR
>CP028127.1|AVQ09257.1|4797318_4798920_-|glucan-biosynthesis-protein-D
MQRRHFLKNAAAALAALGLPALPQWALAAKAVGLRRLGQPQPFDYAWLKGQARELAKAPYKSHKQVLPGPLEALNWDQYQSIRYRQDHALWADGNGKFQAKFFHLGLYFHTPVHIYDIVDGKAQQLAYDPAAFDYGKSGLGGKQLPKDLGFAGFRLNTRKDTDRDYSAFLGASYFRAVGKEGQYGQSARGLAIDTGTGGPEEFPDFIAYYLEQPADDSNTVVVYGLLDSPSIAGAYRFAITNGDVLLMDIDSALYPRKTIERLGIGPCTSMYQVGENDNRMDWDWRPEIHDTDGLAMWTGGGEWIWRPLCNPPHLRFNMFVDENPRGFGLLQRDRNFDHYQDDGVFYEKRPCLWVEPKSGWGKGSVQLVEIPTVDETFDNIVAFWNPQAKPQPGQELLMGYRLYWGAQPPASSPLAHCVATRTGLGGIVGQKRSHFSWRFVVDFTGGELAALTKDPKAKVEAVLQVSRGTTEIVSARPLHELKGYRAMFDLVPPDEGAQQIDIRLYLRANGKPLTETWLYQWTPPAASERRMY
>CP028127.1|AVQ08836.1|4795907_4797152_+|histidine-kinase
MDPLPPALRADIARVGRLSSVPDVLTVLTRLTGMGFAAVARVTEARWITCQVHDTLSFGLRPGDELPLATTFCDSVRVKGNAVWFGHASDDPVYRDHPSPRLYGFESYVSVPIKFDDGSVFGTLCALDPQPRVMDAPLVEKVELLAQLLAAQIQAEQRAEESAQESRRARSELGRVGASARLREEFIGILAHDLRNPLQSMHAVVDMLSIDQLNHRYGSSFRSMQRSLRRMEELIDFACDFARGIERDWLQLDYGDGSDLLDALSQVVDETRAAYPNQVLSTHVAIDEPVHGDAIRLAQMFGSLMINAVVQGPQSSLIKAVAVTEHGRLRFEVCNLDGIDPRRLDVLHASTHVHAGGRALPDVDLGLHMAAQIAKAHQGELRIISEKGGTCFRVELACARPRGRLQLVDNSAPA
>CP028127.1|AVQ08835.1|4794817_4795447_+|thymidine-kinase
MAKLYFYYSAMNAGKTTTLLQSAHNYRERGMRTLILTPKLDHRAGSGVVASRIGLRADGRIFERDTELQQLVERDIHDDGPLHCVLVDEAQFLSRTQVWQLSEVVDRLRIPVLCYGLRTDFRGELFEGSQFLLAWADELEEIKTICHSGSKATMTVRVDAHGHAVQDGPQVEIGGNERYVSVSRAEFKKIMRGEGRIDPLQIALPLPVA
>CP028127.1|AVQ08834.1|4792632_4794609_-|DNA-helicase-Rep
MYGLNPPQSAAVLHCEGPLLVLAGAGSGKTRVIVEKIAHLIAIGRYPAKRIAAITFTNKSAKEMRERVAKRIRGDGADGLTICTFHALGLKFLQIEHAAAGLKRGFSIFDSDDAAAQIKDLMHGAKPDAIEDAKNLISRAKNAGLSPEQAMAAARSTREKEAASLYERYQARLTTFNAVDFDDLIRLPVQILEANEDIVMGWRERIGYLLVDECQDTNDAQYRLLKMLAGPRGNFTCVGDDDQSIYAWRGANPENLQQMARDYPALEIIKLEQNYRCSNRVLRAANALIAHNPHEHLKTLWSDQADGERIRVWECRDSEHEAEKVAAEISFLGTAKQVPWSDFCILFRGNFQSRPLEKALQLLRVPYHLTGGTAFLERQEVKDVLSWLRLIVNPDDDAAFLRAVQSPKREVGATSLARLAELASAKSVPMSRAAESMGALQHLPPRAANGLSAFTDILRDMREHSSSMPAGELVRMLAEKSGLLNDLRNQSKDETGFQRRKRNLDELAEWFEGGPRGASASDLAAQLALLSRNDKDDGGNQVRMMTMHASKGLEFRYVFIVGCEDGVLPHEVSLEEGNLQEERRLLYVGITRAKEQLWMSHSKLTRKFGEHVRLKPSRFFDEIPAEELQRDGADPVADAERKKERASAGLAAIQALFD
>CP028127.1|AVQ08833.1|4791989_4792544_-|N-acetyltransferase
MMPECDVTVVIETPRLRLRTLDPEHDADAMLELVNDPGFIAGINDRGIRTREQARAHLRAWAQAHQERYGFAHWTVETREDAAFVGTLGLLCRDTLPVPHIGFALLPAYRGKGYVTEAGRAVLDYARAVLGLSQLCAIVSPDNANSIRALEKLGLQQHGLRELSPETAAVLYYEIDLGPARSAS
>CP028127.1|AVQ08841.1|4813489_4815652_-|lytic-murein-transglycosylase
MTLPRCALPLVLGLLPLAACADPAFDRCLAGLQSQAAAKGVDAASFQRFTAGLVPDPSVLPLLDAQPEFTTPIWDYLASLVDSQRVTDGQAMLVTHRELLSRLSEQTGVDPATIVAVWGVESDYGRVTGKRPLLVSLATLSCAGRRQPFFRGEFLALLSLLQQGDLSADGLTGSWAGAFGQTQFMPSTYARIAVDGDGDGRRDLVASIPDALASTANYLVKAGWERARPWGMEVTLPRGFDASKAGRTRRQPLQAWRTAGLLGTDGKPLAPTGLPAETPAALLLPAGATGPAFLVFRNYDAIYAYNAAESYALSIALLADRLRGGPGLVAAWPTDDPGLGRPERRELQQLLLARGHQIGEADGMVGSATRRAIQVEQTRLGLQPADGRPGQRILTALRAAPPVAGAAAIRATAFKLPAAYPAFAQSPIVHKASPMSDITGLTTGDFHGFPSLLIDTPFSTAAISLFGGQLVSFVPKGGQDVMWLSPSAQQPPTPIRGGAPVCWPYFGRQDQTGDVPAHGFVRTVAWQLTESRREDDGTVVLTLTPPRLDDLALRLRMTLRIGRTLEQRLITENISGASVRFTQALHNYFHVGDALNVSVQGLDGLDYLDKYENYATAHRQQGDWSLRDPRDPGRSDRIYTNAGGRYTLTDPVLGRRIVIATEGSRSLVVWNPGEEAGKKMADVGDGWRDYVCLEAANAGPDVIELAPGASHTLSQTISVE
>CP028127.1|AVQ08842.1|4815828_4816035_-|hypothetical-protein
MATLNLWQWAILAAVVFAIVLPACVATALIRFGPRHDAPRRARTRRLAESAPSAPALSLLTGIAGESS
>CP028127.1|AVQ08843.1|4816253_4816643_-|hypothetical-protein
MPTSIPTDPCPCGRPADYARCCGPYHSGTAAPDAQTLMRARYSAYVRRDAAYLLASWHPSTRPAELSLDEGGRTTWLGLTVQRTLDTGPDTAEVVFLARYRIGGGSAVRMTEHSRFVREGGHWYYLDAR
>CP028127.1|AVQ08844.1|4816988_4817810_+|hypothetical-protein
MRCVYAGGPVLRSVTLLELIPTELPWLLCIAFVAGLVDAAVGGGGLIQLPGLFATLPQQAPSLILGTNKFSAMFGTGASAWRYARNVRFPWRPVLYATAAAFTFSFLGATAVSLMPKQAVRPLILLLLIAMLIYTLIKKDFGALHRPRDIGRRELATALAMGAAIGFYDGFFGPGTGSFLIFLFIRFFGLDFLRASAAAKVVNLATNLAALSFFLPSGQVMLAIGIPMAAANVAGAVAGTRMALRGGTPLIRTLFLVLVIVLIGKMGWDLLHQ
>CP028127.1|AVQ08845.1|4817885_4821902_-|ATP-binding-protein
MTSQPNLSPVQPGTSLFAETLAEQRAQQFRMRRLQVHNWGTFNGLTEVPIAEKGFLFVGRSGSGKSTLLDAMSALLTPPSIVDFNAAAREAERSGRDRSLVSYVRGAWADQQDSTSGEIATQYLRKGATWTALVLEYANAHGEAVSLIRLFWIAGSGNAAADVRRHYMVAPRSFDVATELDGFDLDLRKLKARLGQEIAHFDGFAGYAERFRHALGIGNEMALRLLHKTQSAKNLGDLNAFLRGFMLDEPRTFEAADRLVEDFAELDGAHHAVVTARRQVETLTPAREHHAALMALRHSVGELRELQLGVDSYREQQRLALLEERLQELDNQDRGLAGEEGQRRESLDNYEQKLVGLEREQRAAGGEQIEELERERARVERERDERLRRRAQIEQACRQLGTALAAGASGFAAQIAHAQTVLDNGKHDASALDDAIAERMGARRDDERRFAEIRAELDVLKRAPSSMPAPMQALRARLCEDIGIAEAALPFVGELVRVRDDQMAWRGAIERVLNGFAQSLLVDERHYAQVSEWVNRTHIGTRLVYFRVRRNDDLHARRVDPDALPGKLQLREHAFTDWLRNELTRRFDYACVDNANALRNADRAITREGQVKHPGDRYEKDDRHAVNDRKRWLLGHDNRDKLKVFEREAQALAQQIASCDADVAALRKQREQDQERQLAAHTLVERDWDEIDVGPKLQRLSDIDEQLVQLREGNSGLRALGQAIDTARTLRDQAKRTYDDVRLERAQLARERVRLEQQHAACAGRAGTATLTPTQLQGLRERLAALTPLSLDNLEAHFRVVERGLAEQLAESQGRDSRLSTQLLECFRRYCQQWPEDSGDFTVSLASADDFLARLDRLESDGLPRHEHRFFDLLQTQSKNNLLALQRHTAEAHKGIKQRMDEVNASLEQVPFNRDTVLTIEVSDRRLAEVQEFQQQLRAVLSHQQTEDRALAEAQFSTLRALVARLGAQEPEARRWREQVLDVRLHVEFIGVELDAQTRAQVEIYRSGAGKSGGQRQKLATTCLAAALRYQLGGEDGELPRYCAVVLDEAFDKADNEFTALAMNIFENFGFQMVVATPLKSVMTLEPFIGGACFVEISGRHNSGVLLIEYDEQAQRLKLPERSRGDEAAVADATDAAPSIKAAIEPEEVQGAAAADGIAADDLPMHAASPVPGHATPAVENKRSGKRVPAVATTNKQNKNEQNKKARTASSTRAVAQPRATQPKKSPVRTSAVTGKPASDKRTSGAQQAPAVSSGAASKSNVGKTTRSSKTQGKPMTATRASNATSKKAAAKPRASTASTGQPARGAGKTTSARAAVKPSPTKKRGAKAGTVQPRGKR
>CP028127.1|AVQ08846.1|4822176_4822881_-|DUF4194-domain-containing-protein
MNWSEQLPSDRYEDDEDAADSTPPLRASDAAGDPPGGALFLGDTGTLPFDARRALCQLLAGPSIDAQRHGTLWPALLRNEVAIRQLLCELFLELVLDREGGVAFTRQADTAELESPTLLRSAPLTFIESVLLLFLRQQLAEADTRGERAVVDEAQLVEALSVYEKNVSTDRAGFARRVMTAIGKMRDNQLLSRLRGSEERYEVSPVLKLLFSAEDVQALVVAYRGLREGDVALE
>CP028127.1|AVQ08847.1|4822867_4824337_-|DUF3375-domain-containing-protein
MKHQARIAGYRQLREQPVWKLLAADHAPELIGLLQTVLMDGERRLPSAVLHARLQRQLDALRADELSRELPRTAQAYLAHWLAQGWLERRLPEGATEEEYELSRAATQAIRFIVGLRESSSSATESRLSLVIQQLVQLAGQTEADPEVRLAALRDERARIDAEIERVASGRVAALDGKRALERARDLIHLSDELAQDFHRVRDDFEQLNRQFRERIIDDEGARGDVLEQLFNGVDVIADSEAGRTFEAFWSLLNDTQQSSQLDQALDALLARGFARKLDRRERAFLRGLTGTLLERGGEVHMVMQHFARSLRGFVQSRGYLEQRRLNQLLKQAQGEALQLRDSLHATTATGYTQALSGSRLRSLSQWRLHDPRLTQVDGRVQAADAAEISLDSVGDLVAQSEIDVRSLRRDLHALLGQRPRLTIGDALQQRPAIQGLGSVIGYLSLGTRHGMVIEGQMETVQWEGSDGAVRRARIPLVWFTREKRNELV
>CP028127.1|AVQ08848.1|4824356_4824986_-|GTP-cyclohydrolase-I-FolE
MLAPFGCTCMSQSDQPDSSVTQAQAEEAVRTLLRWAGEDPTREGLLDTPRRVAEAYGDWFSGYRIEPREYLERTFEEVAGYDELIVLRDISYESHCEHHMAPIIGKVHVGYLPRGKVVGISKLARVVESYARRFQVQEKMTAQIAQCIQDVLQPLGVGVVVEGAHECMTTRGIHKRDVSMVTSKMLGSFREDARTRAEFLQFIDVGGKR
>CP028127.1|AVQ08849.1|4825087_4825540_+|MarR-family-transcriptional-regulator
MKVPLSPRAQLSSGLLVAARQWQRLADQAFATFSLSSACTGPLLMIGRSGGGIRQVALAQQLGMEGPSLVRLLDKLAGQGLLRREADSSDRRANQLWLTEEGQALAGRIEIRLDALRAEVFGTLSDADVQVVLTLWEQIAQAHARLSQAD
>CP028127.1|AVQ08850.1|4825629_4825848_+|DUF1656-domain-containing-protein
MCPMYGEFSLYGVFVPTLLALMTLAYLLNSTVAALLTRAGAYRYIWHPALFNLALYIALLGGLFFLTRWMQS

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP028127_2	2.1\|4333500\|34\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4333500-4333533	34	CP028127.1	4326888-4326921	0	1.0
CP028127_2	2.13\|4334284\|35\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334284-4334318	35	CP028127.1	2459929-2459963	1	0.971

1. spacer 2.1|4333500|34|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to position: 4326888-4326921, mismatch: 0, identity: 1.0

gcaagtcgttgcggtgggtacgctcgatgccacg	CRISPR spacer
gcaagtcgttgcggtgggtacgctcgatgccacg	Protospacer
**********************************

2. spacer 2.13|4334284|35|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to position: 2459929-2459963, mismatch: 1, identity: 0.971

tctctattggttgggcttgcgtcggttgggttact	CRISPR spacer
tctctgttggttgggcttgcgtcggttgggttact	Protospacer
*****.*****************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP028127_2	2.28\|4335279\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4335279-4335314	36	NZ_CP018476	Xanthomonas perforans strain LH3 plasmid pLH3.2, complete sequence	11439-11474	0	1.0
CP028127_2	2.28\|4335279\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4335279-4335314	36	NZ_CP041964	Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1	34274-34309	0	1.0
CP028127_2	2.28\|4335279\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4335279-4335314	36	NZ_CP018853	Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.3, complete sequence	39554-39589	0	1.0
CP028127_2	2.28\|4335279\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4335279-4335314	36	NZ_CP022265	Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plC, complete sequence	19196-19231	0	1.0
CP028127_2	2.28\|4335279\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4335279-4335314	36	NZ_CP018857	Xanthomonas citri pv. citri strain LH276 plasmid pLH276.3, complete sequence	29035-29070	0	1.0
CP028127_2	2.28\|4335279\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4335279-4335314	36	NZ_CP024080	Xanthomonas citri pv. citri strain Xcc29-1 plasmid pXAC47, complete sequence	4100-4135	0	1.0
CP028127_2	2.28\|4335279\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4335279-4335314	36	NC_020798	Xanthomonas axonopodis Xac29-1 plasmid pXAC47, complete sequence	4099-4134	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	CP030170	Xanthomonas citri pv. punicae strain BD0025 plasmid unnamed, complete sequence	54580-54613	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP019227	Xanthomonas oryzae pv. oryzae strain IX-280 plasmid pXOO43, complete sequence	21903-21936	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_KR071788	Xanthomonas oryzae pv. oryzicola strain GX01 plasmid pXOCgx01, complete sequence	24680-24713	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	CP030162	Xanthomonas citri pv. punicae strain BD0023 plasmid unnamed, complete sequence	103558-103591	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP018465	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.4, complete sequence	869-902	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP030165	Xanthomonas citri pv. punicae strain LMG7439 plasmid unnamed, complete sequence	126222-126255	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP018860	Xanthomonas citri pv. citri strain LH201 plasmid pLH201.2, complete sequence	80693-80726	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP018852	Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.2, complete sequence	18013-18046	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP012003	Xanthomonas citri pv. aurantifolii strain 1566 plasmid unnamed, complete sequence	25957-25990	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP011164	Xanthomonas citri pv. aurantifolii strain FDC 1609 plasmid pXfc37, complete sequence	7562-7595	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP024030	Xanthomonas citri pv. citri strain Xcc49 plasmid pXAC64, complete sequence	42689-42722	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP011963	Xanthomonas oryzae pv. oryzicola strain CFBP2286 plasmid, complete sequence	19775-19808	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP009012	Xanthomonas citri pv. citri strain JX4 plasmid pXAC64, complete sequence	42932-42965	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP008997	Xanthomonas citri pv. citri strain MN12 plasmid pXAC64, complete sequence	41741-41774	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP013664	Xanthomonas citri pv. citri strain jx-6 plasmid pXAC64, complete sequence	42940-42973	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP009000	Xanthomonas citri pv. citri strain MN11 plasmid pXAC64, complete sequence	41741-41774	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP024033	Xanthomonas citri pv. citri strain Xcc29-1 plasmid pXAC64, complete sequence	42692-42725	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP021022	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pG, complete sequence	22397-22430	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP011162	Xanthomonas citri pv. aurantifolii strain FDC 1559 plasmid pXfc38, complete sequence	330-363	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP009015	Xanthomonas citri pv. citri strain GD3 plasmid pXAC64, complete sequence	42939-42972	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NC_007506	Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV38, complete sequence	37453-37486	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP008994	Xanthomonas citri pv. citri strain NT17 plasmid pXAC64, complete sequence	42940-42973	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP009009	Xanthomonas citri pv. citri strain JX5 plasmid pXAC64, complete sequence	42932-42965	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP009003	Xanthomonas citri pv. citri strain MN10 plasmid pXAC64, complete sequence	41741-41774	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP009018	Xanthomonas citri pv. citri strain GD2 plasmid pXAC64, complete sequence	42940-42973	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP009021	Xanthomonas citri pv. citri strain FB19 plasmid pXAC64, complete sequence	42940-42973	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP008988	Xanthomonas citri pv. citri strain UI7 plasmid pXAC64, complete sequence	42940-42973	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NC_020797	Xanthomonas axonopodis Xac29-1 plasmid pXAC64, complete sequence	42679-42712	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP009006	Xanthomonas citri pv. citri strain MF20 plasmid pXAC64, complete sequence	42940-42973	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP008991	Xanthomonas citri subsp. citri UI6 plasmid pXAC64, complete sequence	42940-42973	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NC_003922	Xanthomonas citri pv. citri str. 306 plasmid pXAC64, complete sequence	42940-42973	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP011251	Xanthomonas citri pv. aurantifolii strain FDC 1561 plasmid pXfb33, complete sequence	31436-31469	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	CP030179	Xanthomonas citri pv. punicae strain LMG 859 plasmid unnamed, complete sequence	91841-91874	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP017192	Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid p_XCV_2, complete sequence	25325-25358	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP023287	Xanthomonas citri pv. citri strain 03-1638-1-1 plasmid pP2, complete sequence	6892-6925	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	CP030160	Xanthomonas citri pv. punicae strain BD0022 plasmid unnamed, complete sequence	21038-21071	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP018849	Xanthomonas citri pv. citri strain LL074-4 plasmid pLL074-4.2, complete sequence	5210-5243	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NC_005240	Xanthomonas citri plasmid pXcB, complete sequence	3395-3428	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP011165	Xanthomonas citri pv. aurantifolii strain FDC 1609 plasmid pXfc32, complete sequence	10464-10497	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP018856	Xanthomonas citri pv. citri strain LH276 plasmid pLH276.2, complete sequence	62013-62046	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	CP030167	Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed1, complete sequence	20908-20941	0	1.0
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP023157	Xanthomonas citri pv. malvacearum strain AR81009 plasmid unnamed2, complete sequence	19629-19662	0	1.0
CP028127_3	3.15\|4339096\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339096-4339129	34	NZ_CP018476	Xanthomonas perforans strain LH3 plasmid pLH3.2, complete sequence	16653-16686	0	1.0
CP028127_3	3.15\|4339096\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339096-4339129	34	NZ_CP041964	Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1	29967-30000	0	1.0
CP028127_3	3.15\|4339096\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339096-4339129	34	NZ_CP022265	Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plC, complete sequence	13984-14017	0	1.0
CP028127_2	2.18\|4334617\|35\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334617-4334651	35	NC_019933	Xanthomonas phage CP1 DNA, complete genome	11447-11481	1	0.971
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP030165	Xanthomonas citri pv. punicae strain LMG7439 plasmid unnamed, complete sequence	4082-4115	1	0.971
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	NZ_CP034651	Xanthomonas vasicola strain NCPPB 1060 plasmid pXVH45, complete sequence	36603-36636	1	0.971
CP028127_3	3.4\|4338374\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338374-4338407	34	CP030168	Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed2, complete sequence	4763-4796	1	0.971
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP041964	Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1	33220-33254	1	0.971
CP028127_3	3.15\|4339096\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339096-4339129	34	NZ_CP018853	Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.3, complete sequence	44599-44632	1	0.971
CP028127_3	3.15\|4339096\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339096-4339129	34	NZ_CP024080	Xanthomonas citri pv. citri strain Xcc29-1 plasmid pXAC47, complete sequence	9141-9174	1	0.971
CP028127_3	3.15\|4339096\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339096-4339129	34	NC_020798	Xanthomonas axonopodis Xac29-1 plasmid pXAC47, complete sequence	9143-9176	1	0.971
CP028127_3	3.15\|4339096\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339096-4339129	34	NZ_CP018857	Xanthomonas citri pv. citri strain LH276 plasmid pLH276.3, complete sequence	23993-24026	1	0.971
CP028127_3	3.18\|4339291\|37\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339291-4339327	37	NZ_CP020884	Xanthomonas citri pv. citri strain TX160042 plasmid unnamed2, complete sequence	31489-31525	1	0.973
CP028127_3	3.18\|4339291\|37\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339291-4339327	37	CP030168	Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed2, complete sequence	34976-35012	1	0.973
CP028127_3	3.18\|4339291\|37\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339291-4339327	37	NZ_CP020891	Xanthomonas citri pv. citri strain TX160197 plasmid unnamed2, complete sequence	25266-25302	1	0.973
CP028127_2	2.2\|4333565\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4333565-4333600	36	NC_019933	Xanthomonas phage CP1 DNA, complete genome	5367-5402	2	0.944
CP028127_2	2.13\|4334284\|35\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334284-4334318	35	MN335248	Xanthomonas phage XaF13, complete genome	20-54	2	0.943
CP028127_2	2.16\|4334484\|37\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334484-4334520	37	MN335248	Xanthomonas phage XaF13, complete genome	4813-4849	2	0.946
CP028127_2	2.20\|4334750\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334750-4334785	36	NZ_CP041964	Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1	18856-18891	2	0.944
CP028127_2	2.20\|4334750\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334750-4334785	36	NZ_CP022265	Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plC, complete sequence	39935-39970	2	0.944
CP028127_2	2.20\|4334750\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334750-4334785	36	NZ_CP018857	Xanthomonas citri pv. citri strain LH276 plasmid pLH276.3, complete sequence	48721-48756	2	0.944
CP028127_2	2.20\|4334750\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334750-4334785	36	NZ_CP012061	Xanthomonas sp. ISO98C4 plasmid pNX59, complete sequence	13831-13866	2	0.944
CP028127_2	2.20\|4334750\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334750-4334785	36	NZ_CP020976	Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA	7209-7244	2	0.944
CP028127_2	2.20\|4334750\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334750-4334785	36	NZ_CP020976	Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA	72188-72223	2	0.944
CP028127_2	2.20\|4334750\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334750-4334785	36	NZ_CP012058	Xanthomonas phaseoli pv. phaseoli strain ISO98C12 plasmid pXap59, complete sequence	13830-13865	2	0.944
CP028127_2	2.20\|4334750\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334750-4334785	36	NZ_CP012064	Xanthomonas phaseoli pv. phaseoli strain ISO18C8 plasmid pXap59, complete sequence	13831-13866	2	0.944
CP028127_2	2.20\|4334750\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334750-4334785	36	NZ_CP012049	Xanthomonas phaseoli pv. phaseoli strain ISO18C2 plasmid pXap59, complete sequence	13831-13866	2	0.944
CP028127_2	2.20\|4334750\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334750-4334785	36	NZ_CP018476	Xanthomonas perforans strain LH3 plasmid pLH3.2, complete sequence	43186-43221	2	0.944
CP028127_2	2.20\|4334750\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334750-4334785	36	CP020972	Xanthomonas axonopodis pv. phaseoli strain CFBP6546R plasmid pA, complete sequence	48558-48593	2	0.944
CP028127_2	2.20\|4334750\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334750-4334785	36	NZ_CP018853	Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.3, complete sequence	21684-21719	2	0.944
CP028127_2	2.20\|4334750\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334750-4334785	36	NZ_CP020968	Xanthomonas phaseoli pv. phaseoli strain CFBP6164 plasmid pA, complete sequence	53456-53491	2	0.944
CP028127_2	2.20\|4334750\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334750-4334785	36	NZ_CP024080	Xanthomonas citri pv. citri strain Xcc29-1 plasmid pXAC47, complete sequence	35597-35632	2	0.944
CP028127_2	2.20\|4334750\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334750-4334785	36	NC_020798	Xanthomonas axonopodis Xac29-1 plasmid pXAC47, complete sequence	35599-35634	2	0.944
CP028127_2	2.28\|4335279\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4335279-4335314	36	NC_010509	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD02, complete sequence	45238-45273	2	0.944
CP028127_2	2.40\|4336070\|35\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4336070-4336104	35	NC_019933	Xanthomonas phage CP1 DNA, complete genome	25030-25064	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP034656	Xanthomonas campestris pv. musacearum NCPPB 4379 plasmid pXCM49, complete sequence	25434-25468	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP034656	Xanthomonas campestris pv. musacearum NCPPB 4379 plasmid pXCM49, complete sequence	39632-39666	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP018469	Xanthomonas vesicatoria strain LM159 plasmid pLM159.3, complete sequence	36886-36920	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	CP030179	Xanthomonas citri pv. punicae strain LMG 859 plasmid unnamed, complete sequence	80890-80924	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	CP030179	Xanthomonas citri pv. punicae strain LMG 859 plasmid unnamed, complete sequence	89074-89108	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	CP030179	Xanthomonas citri pv. punicae strain LMG 859 plasmid unnamed, complete sequence	122240-122274	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	CP030160	Xanthomonas citri pv. punicae strain BD0022 plasmid unnamed, complete sequence	10541-10575	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	CP030160	Xanthomonas citri pv. punicae strain BD0022 plasmid unnamed, complete sequence	19351-19385	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	CP030160	Xanthomonas citri pv. punicae strain BD0022 plasmid unnamed, complete sequence	51315-51349	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP018849	Xanthomonas citri pv. citri strain LL074-4 plasmid pLL074-4.2, complete sequence	38326-38360	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP018857	Xanthomonas citri pv. citri strain LH276 plasmid pLH276.3, complete sequence	27981-28015	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NC_003921	Xanthomonas citri pv. citri str. 306 plasmid pXAC33, complete sequence	1387-1421	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP024031	Xanthomonas citri pv. citri strain Xcc49 plasmid pXAC33, complete sequence	13348-13382	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP006855	Xanthomonas citri subsp. citri A306 plasmid pXAC33, complete sequence	1387-1421	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP009011	Xanthomonas citri pv. citri strain JX4 plasmid pXAC33, complete sequence	1387-1421	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP008996	Xanthomonas citri pv. citri strain MN12 plasmid pXAC33, complete sequence	1387-1421	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP013665	Xanthomonas citri pv. citri strain jx-6 plasmid pXAC33, complete sequence	1387-1421	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP008999	Xanthomonas citri pv. citri strain MN11 plasmid pXAC33, complete sequence	1387-1421	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP024032	Xanthomonas citri pv. citri strain Xcc29-1 plasmid pXAC33, complete sequence	13348-13382	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	CP030167	Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed1, complete sequence	10428-10462	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	CP030167	Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed1, complete sequence	19221-19255	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	CP030167	Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed1, complete sequence	51164-51198	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP009014	Xanthomonas citri pv. citri strain GD3 plasmid pXAC33, complete sequence	1387-1421	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NC_020801	Xanthomonas axonopodis Xac29-1 plasmid pXAC33, complete sequence	13347-13381	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP009008	Xanthomonas citri pv. citri strain JX5 plasmid pXAC33, complete sequence	1387-1421	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP013007	Xanthomonas citri pv. malvacearum strain XcmN1003 plasmid pXcmN, complete sequence	2166-2200	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP009002	Xanthomonas citri pv. citri strain MN10 plasmid pXAC33, complete sequence	1387-1421	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP008987	Xanthomonas citri pv. citri strain UI7 plasmid pXAC33, complete sequence	1387-1421	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	CP030170	Xanthomonas citri pv. punicae strain BD0025 plasmid unnamed, complete sequence	24325-24359	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	CP030170	Xanthomonas citri pv. punicae strain BD0025 plasmid unnamed, complete sequence	56266-56300	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	CP030170	Xanthomonas citri pv. punicae strain BD0025 plasmid unnamed, complete sequence	65057-65091	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	CP030162	Xanthomonas citri pv. punicae strain BD0023 plasmid unnamed, complete sequence	73306-73340	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	CP030162	Xanthomonas citri pv. punicae strain BD0023 plasmid unnamed, complete sequence	105244-105278	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	CP030162	Xanthomonas citri pv. punicae strain BD0023 plasmid unnamed, complete sequence	114142-114176	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP023287	Xanthomonas citri pv. citri strain 03-1638-1-1 plasmid pP2, complete sequence	76811-76845	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP030165	Xanthomonas citri pv. punicae strain LMG7439 plasmid unnamed, complete sequence	6836-6870	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP030165	Xanthomonas citri pv. punicae strain LMG7439 plasmid unnamed, complete sequence	14993-15027	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP030165	Xanthomonas citri pv. punicae strain LMG7439 plasmid unnamed, complete sequence	95904-95938	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP030165	Xanthomonas citri pv. punicae strain LMG7439 plasmid unnamed, complete sequence	128988-129022	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP030165	Xanthomonas citri pv. punicae strain LMG7439 plasmid unnamed, complete sequence	137152-137186	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP018860	Xanthomonas citri pv. citri strain LH201 plasmid pLH201.2, complete sequence	47576-47610	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP018852	Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.2, complete sequence	77301-77335	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP018853	Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.3, complete sequence	40609-40643	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP024080	Xanthomonas citri pv. citri strain Xcc29-1 plasmid pXAC47, complete sequence	5154-5188	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP023160	Xanthomonas citri pv. malvacearum strain MS14003 plasmid unnamed1, complete sequence	10840-10874	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP017023	Xanthomonas citri pv. malvacearum strain MSCT plasmid pMSCT60kb, complete sequence	14084-14118	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NC_020798	Xanthomonas axonopodis Xac29-1 plasmid pXAC47, complete sequence	5153-5187	2	0.943
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_LN811400	Xanthomonas campestris pv. campestris isolate B-1459 plasmid I, complete sequence	14507-14541	2	0.943
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NZ_CP010990	Pseudonocardia sp. EC080625-04 plasmid pFRP1-1, complete sequence	131716-131740	3	0.88
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NZ_CP012186	Pseudonocardia sp. EC080619-01 plasmid pBCI1-1, complete sequence	52863-52887	3	0.88
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NC_015314	Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete sequence	177273-177297	3	0.88
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP020986	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6992 plasmid pA, complete sequence	5175-5209	3	0.914
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP020986	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6992 plasmid pA, complete sequence	62245-62279	3	0.914
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP021017	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6991 plasmid pA, complete sequence	24982-25016	3	0.914
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP020982	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6989 plasmid pA, complete sequence	33810-33844	3	0.914
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP012061	Xanthomonas sp. ISO98C4 plasmid pNX59, complete sequence	44176-44210	3	0.914
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP020990	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6996R plasmid pA, complete sequence	50186-50220	3	0.914
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP020980	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6988R plasmid pA, complete sequence	22789-22823	3	0.914
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP012058	Xanthomonas phaseoli pv. phaseoli strain ISO98C12 plasmid pXap59, complete sequence	44177-44211	3	0.914
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP012064	Xanthomonas phaseoli pv. phaseoli strain ISO18C8 plasmid pXap59, complete sequence	44178-44212	3	0.914
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP012049	Xanthomonas phaseoli pv. phaseoli strain ISO18C2 plasmid pXap59, complete sequence	44178-44212	3	0.914
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	CP020972	Xanthomonas axonopodis pv. phaseoli strain CFBP6546R plasmid pA, complete sequence	18220-18254	3	0.914
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP020984	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6990 plasmid pA, complete sequence	464-498	3	0.914
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP020984	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6990 plasmid pA, complete sequence	57533-57567	3	0.914
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP020968	Xanthomonas phaseoli pv. phaseoli strain CFBP6164 plasmid pA, complete sequence	23110-23144	3	0.914
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	CP022268	Xanthomonas citri pv. vignicola strain CFBP7112 plasmid plA, complete sequence	42044-42078	3	0.914
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP021019	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pA, complete sequence	44113-44147	3	0.914
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP020988	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6994R plasmid pA, complete sequence	9670-9704	3	0.914
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NZ_CP049358	Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence	208559-208583	4	0.84
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1640677-1640701	4	0.84
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NZ_CP009855	UNVERIFIED_ORG: Enterobacter cloacae strain ECNIH5 plasmid pENT-22e, complete sequence	30498-30522	4	0.84
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NZ_CP008907	Enterobacter hormaechei subsp. hoffmannii ECR091 plasmid pENT-4bd, complete sequence	99091-99115	4	0.84
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NZ_CP031159	Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence	184935-184959	4	0.84
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NC_016515	Enterobacter ludwigii strain EcWSU1 plasmid pEcWSU1_A, complete sequence	12348-12372	4	0.84
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	3848-3872	4	0.84
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NC_009939	Deinococcus geothermalis DSM 11300 plasmid pDGEO02, complete sequence	49767-49791	4	0.84
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NC_008757	Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete sequence	156051-156075	4	0.84
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	349994-350018	4	0.84
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NZ_CP017991	Enterobacter cloacae complex sp. ECNIH7 plasmid pENT-1ac, complete sequence	79708-79732	4	0.84
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NZ_CP017104	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872c, complete sequence	482535-482559	4	0.84
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	CP006879	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602b, complete sequence	483457-483481	4	0.84
CP028127_3	3.3\|4338309\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338309-4338342	34	MN855814	Myoviridae sp. isolate 234, complete genome	13136-13169	4	0.882
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP018466	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.3, complete sequence	3829-3863	4	0.886
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP018466	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.3, complete sequence	32975-33009	4	0.886
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NC_005240	Xanthomonas citri plasmid pXcB, complete sequence	1641-1675	4	0.886
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP023156	Xanthomonas citri pv. malvacearum strain AR81009 plasmid unnamed1, complete sequence	58113-58147	4	0.886
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP020976	Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA	39362-39396	4	0.886
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP011161	Xanthomonas citri pv. aurantifolii strain FDC 1559 plasmid pXfc43, complete sequence	1262-1296	4	0.886
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP046021	Xanthomonas citri pv. malvacearum strain HD-1 plasmid unnamed2, complete sequence	6383-6417	4	0.886
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP018727	Xanthomonas vesicatoria ATCC 35937 strain LMG911 plasmid pLMG911.2, complete sequence	40109-40143	4	0.886
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP012003	Xanthomonas citri pv. aurantifolii strain 1566 plasmid unnamed, complete sequence	27710-27744	4	0.886
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP011164	Xanthomonas citri pv. aurantifolii strain FDC 1609 plasmid pXfc37, complete sequence	9304-9338	4	0.886
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP013005	Xanthomonas citri pv. malvacearum strain XcmH1005 plasmid pXcmH, complete sequence	54764-54798	4	0.886
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP020965	Xanthomonas phaseoli pv. phaseoli strain CFBP412 plasmid pA, complete sequence	8585-8619	4	0.886
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP022265	Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plC, complete sequence	18142-18176	5	0.857
CP028127_3	3.13\|4338965\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338965-4338999	35	NZ_CP018476	Xanthomonas perforans strain LH3 plasmid pLH3.2, complete sequence	12494-12528	5	0.857
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NZ_CP050083	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence	308417-308441	6	0.76
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NZ_CP049733	Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence	299387-299411	6	0.76
CP028127_1	1.2\|26026\|25\|CP028127\|PILER-CR	26026-26050	25	NZ_CP053207	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence	330214-330238	6	0.76
CP028127_2	2.2\|4333565\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4333565-4333600	36	NC_019489	Lactobacillus phage Sha1, complete genome	9092-9127	6	0.833
CP028127_3	3.16\|4339161\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339161-4339194	34	NC_048197	Erwinia phage vB_EhrS_49, complete genome	31647-31680	6	0.824
CP028127_2	2.5\|4333764\|33\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4333764-4333796	33	MH595538	Vibrio phage BONAISHI, complete genome	140809-140841	7	0.788
CP028127_3	3.5\|4338439\|35\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4338439-4338473	35	NC_019933	Xanthomonas phage CP1 DNA, complete genome	28466-28500	7	0.8
CP028127_2	2.2\|4333565\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4333565-4333600	36	NZ_CP042244	Crassaminicella sp. SY095 plasmid pCT01, complete sequence	5191-5226	8	0.778
CP028127_2	2.21\|4334817\|34\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334817-4334850	34	NZ_CP054620	Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence	310472-310505	8	0.765
CP028127_3	3.15\|4339096\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339096-4339129	34	MK080312	Salmonella phage Astrid, complete genome	8022-8055	8	0.765
CP028127_3	3.15\|4339096\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339096-4339129	34	MT074440	Salmonella phage assan, complete genome	7955-7988	8	0.765
CP028127_2	2.2\|4333565\|36\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4333565-4333600	36	HQ332138	Paenibacillus phage PG1 genomic sequence	914-949	9	0.75
CP028127_2	2.21\|4334817\|34\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334817-4334850	34	NZ_CP009573	Sphingomonas taxi strain ATCC 55669 plasmid STP2, complete sequence	34067-34100	9	0.735
CP028127_2	2.16\|4334484\|37\|CP028127\|PILER-CR,CRISPRCasFinder,CRT	4334484-4334520	37	AM157767	Uncultured bacterium IncP-1gamma plasmid QKH54 complete genome	69371-69407	10	0.73
CP028127_3	3.14\|4339031\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339031-4339064	34	NZ_CP034364	Pantoea sp. CCBC3-3-1 plasmid unnamed1, complete sequence	3552-3585	10	0.706
CP028127_3	3.14\|4339031\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339031-4339064	34	NZ_CP034364	Pantoea sp. CCBC3-3-1 plasmid unnamed1, complete sequence	12039-12072	10	0.706
CP028127_3	3.14\|4339031\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339031-4339064	34	NZ_CP034364	Pantoea sp. CCBC3-3-1 plasmid unnamed1, complete sequence	20541-20574	10	0.706
CP028127_3	3.15\|4339096\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339096-4339129	34	NZ_CP016619	Microvirga ossetica strain V5/3m plasmid unnamed2, complete sequence	594331-594364	10	0.706
CP028127_3	3.15\|4339096\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339096-4339129	34	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	437548-437581	10	0.706
CP028127_3	3.15\|4339096\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339096-4339129	34	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1164994-1165027	10	0.706
CP028127_3	3.15\|4339096\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339096-4339129	34	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	54148-54181	10	0.706
CP028127_3	3.15\|4339096\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339096-4339129	34	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	1694813-1694846	10	0.706
CP028127_3	3.16\|4339161\|34\|CP028127\|CRISPRCasFinder,CRT,PILER-CR	4339161-4339194	34	CP000621	Burkholderia vietnamiensis G4 plasmid pBVIE05, complete sequence	32115-32148	10	0.706

1. spacer 2.28|4335279|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018476 (Xanthomonas perforans strain LH3 plasmid pLH3.2, complete sequence) position: , mismatch: 0, identity: 1.0

attgtcgtgatcgccaaggctgttatccgcgctgta	CRISPR spacer
attgtcgtgatcgccaaggctgttatccgcgctgta	Protospacer
************************************

2. spacer 2.28|4335279|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041964 (Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

attgtcgtgatcgccaaggctgttatccgcgctgta	CRISPR spacer
attgtcgtgatcgccaaggctgttatccgcgctgta	Protospacer
************************************

3. spacer 2.28|4335279|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018853 (Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.3, complete sequence) position: , mismatch: 0, identity: 1.0

attgtcgtgatcgccaaggctgttatccgcgctgta	CRISPR spacer
attgtcgtgatcgccaaggctgttatccgcgctgta	Protospacer
************************************

4. spacer 2.28|4335279|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022265 (Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plC, complete sequence) position: , mismatch: 0, identity: 1.0

attgtcgtgatcgccaaggctgttatccgcgctgta	CRISPR spacer
attgtcgtgatcgccaaggctgttatccgcgctgta	Protospacer
************************************

5. spacer 2.28|4335279|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018857 (Xanthomonas citri pv. citri strain LH276 plasmid pLH276.3, complete sequence) position: , mismatch: 0, identity: 1.0

attgtcgtgatcgccaaggctgttatccgcgctgta	CRISPR spacer
attgtcgtgatcgccaaggctgttatccgcgctgta	Protospacer
************************************

6. spacer 2.28|4335279|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024080 (Xanthomonas citri pv. citri strain Xcc29-1 plasmid pXAC47, complete sequence) position: , mismatch: 0, identity: 1.0

attgtcgtgatcgccaaggctgttatccgcgctgta	CRISPR spacer
attgtcgtgatcgccaaggctgttatccgcgctgta	Protospacer
************************************

7. spacer 2.28|4335279|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NC_020798 (Xanthomonas axonopodis Xac29-1 plasmid pXAC47, complete sequence) position: , mismatch: 0, identity: 1.0

attgtcgtgatcgccaaggctgttatccgcgctgta	CRISPR spacer
attgtcgtgatcgccaaggctgttatccgcgctgta	Protospacer
************************************

8. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030170 (Xanthomonas citri pv. punicae strain BD0025 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

9. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019227 (Xanthomonas oryzae pv. oryzae strain IX-280 plasmid pXOO43, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

10. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KR071788 (Xanthomonas oryzae pv. oryzicola strain GX01 plasmid pXOCgx01, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

11. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030162 (Xanthomonas citri pv. punicae strain BD0023 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

12. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018465 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.4, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

13. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030165 (Xanthomonas citri pv. punicae strain LMG7439 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

14. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018860 (Xanthomonas citri pv. citri strain LH201 plasmid pLH201.2, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

15. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018852 (Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.2, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

16. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012003 (Xanthomonas citri pv. aurantifolii strain 1566 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

17. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011164 (Xanthomonas citri pv. aurantifolii strain FDC 1609 plasmid pXfc37, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

18. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024030 (Xanthomonas citri pv. citri strain Xcc49 plasmid pXAC64, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

19. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011963 (Xanthomonas oryzae pv. oryzicola strain CFBP2286 plasmid, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

20. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009012 (Xanthomonas citri pv. citri strain JX4 plasmid pXAC64, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

21. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008997 (Xanthomonas citri pv. citri strain MN12 plasmid pXAC64, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

22. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013664 (Xanthomonas citri pv. citri strain jx-6 plasmid pXAC64, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

23. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009000 (Xanthomonas citri pv. citri strain MN11 plasmid pXAC64, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

24. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024033 (Xanthomonas citri pv. citri strain Xcc29-1 plasmid pXAC64, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

25. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021022 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pG, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

26. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011162 (Xanthomonas citri pv. aurantifolii strain FDC 1559 plasmid pXfc38, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

27. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009015 (Xanthomonas citri pv. citri strain GD3 plasmid pXAC64, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

28. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NC_007506 (Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV38, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

29. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008994 (Xanthomonas citri pv. citri strain NT17 plasmid pXAC64, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

30. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009009 (Xanthomonas citri pv. citri strain JX5 plasmid pXAC64, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

31. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009003 (Xanthomonas citri pv. citri strain MN10 plasmid pXAC64, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

32. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009018 (Xanthomonas citri pv. citri strain GD2 plasmid pXAC64, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

33. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009021 (Xanthomonas citri pv. citri strain FB19 plasmid pXAC64, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

34. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008988 (Xanthomonas citri pv. citri strain UI7 plasmid pXAC64, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

35. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NC_020797 (Xanthomonas axonopodis Xac29-1 plasmid pXAC64, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

36. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009006 (Xanthomonas citri pv. citri strain MF20 plasmid pXAC64, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

37. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008991 (Xanthomonas citri subsp. citri UI6 plasmid pXAC64, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

38. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NC_003922 (Xanthomonas citri pv. citri str. 306 plasmid pXAC64, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

39. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011251 (Xanthomonas citri pv. aurantifolii strain FDC 1561 plasmid pXfb33, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

40. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030179 (Xanthomonas citri pv. punicae strain LMG 859 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

41. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017192 (Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid p_XCV_2, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

42. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023287 (Xanthomonas citri pv. citri strain 03-1638-1-1 plasmid pP2, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

43. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030160 (Xanthomonas citri pv. punicae strain BD0022 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

44. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018849 (Xanthomonas citri pv. citri strain LL074-4 plasmid pLL074-4.2, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

45. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NC_005240 (Xanthomonas citri plasmid pXcB, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

46. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011165 (Xanthomonas citri pv. aurantifolii strain FDC 1609 plasmid pXfc32, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

47. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018856 (Xanthomonas citri pv. citri strain LH276 plasmid pLH276.2, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

48. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030167 (Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

49. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023157 (Xanthomonas citri pv. malvacearum strain AR81009 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatcgccaaggtgatgatgc	Protospacer
**********************************

50. spacer 3.15|4339096|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018476 (Xanthomonas perforans strain LH3 plasmid pLH3.2, complete sequence) position: , mismatch: 0, identity: 1.0

tccgccagggcgtcaatatcggcctgggtaaacc	CRISPR spacer
tccgccagggcgtcaatatcggcctgggtaaacc	Protospacer
**********************************

51. spacer 3.15|4339096|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041964 (Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

tccgccagggcgtcaatatcggcctgggtaaacc	CRISPR spacer
tccgccagggcgtcaatatcggcctgggtaaacc	Protospacer
**********************************

52. spacer 3.15|4339096|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022265 (Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plC, complete sequence) position: , mismatch: 0, identity: 1.0

tccgccagggcgtcaatatcggcctgggtaaacc	CRISPR spacer
tccgccagggcgtcaatatcggcctgggtaaacc	Protospacer
**********************************

53. spacer 2.18|4334617|35|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NC_019933 (Xanthomonas phage CP1 DNA, complete genome) position: , mismatch: 1, identity: 0.971

cgccggtatgcatcctttgcaaaagtcattacagc	CRISPR spacer
cgccggtatgcatcctttgcaaaggtcattacagc	Protospacer
***********************.***********

54. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030165 (Xanthomonas citri pv. punicae strain LMG7439 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.971

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgataccctttgatcgccaaggtgatgatgc	Protospacer
************* ********************

55. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034651 (Xanthomonas vasicola strain NCPPB 1060 plasmid pXVH45, complete sequence) position: , mismatch: 1, identity: 0.971

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgatacccttggatagccaaggtgatgatgc	Protospacer
***************** ****************

56. spacer 3.4|4338374|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030168 (Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.971

caacgatacccttggatcgccaaggtgatgatgc	CRISPR spacer
caacgataaccttggatcgccaaggtgatgatgc	Protospacer
******** *************************

57. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041964 (Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1) position: , mismatch: 1, identity: 0.971

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaaaaccagtcaatgggca	Protospacer
*********************************.*

58. spacer 3.15|4339096|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018853 (Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.3, complete sequence) position: , mismatch: 1, identity: 0.971

tccgccagggcgtcaatatcggcctgggtaaacc	CRISPR spacer
tccgccagggcgtcaatatcggcctgggtgaacc	Protospacer
*****************************.****

59. spacer 3.15|4339096|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024080 (Xanthomonas citri pv. citri strain Xcc29-1 plasmid pXAC47, complete sequence) position: , mismatch: 1, identity: 0.971

tccgccagggcgtcaatatcggcctgggtaaacc	CRISPR spacer
tccgccagggcgtcaatatcggcctgggtgaacc	Protospacer
*****************************.****

60. spacer 3.15|4339096|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NC_020798 (Xanthomonas axonopodis Xac29-1 plasmid pXAC47, complete sequence) position: , mismatch: 1, identity: 0.971

tccgccagggcgtcaatatcggcctgggtaaacc	CRISPR spacer
tccgccagggcgtcaatatcggcctgggtgaacc	Protospacer
*****************************.****

61. spacer 3.15|4339096|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018857 (Xanthomonas citri pv. citri strain LH276 plasmid pLH276.3, complete sequence) position: , mismatch: 1, identity: 0.971

tccgccagggcgtcaatatcggcctgggtaaacc	CRISPR spacer
tccgccagggcgtcaatatcggcctgggtgaacc	Protospacer
*****************************.****

62. spacer 3.18|4339291|37|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020884 (Xanthomonas citri pv. citri strain TX160042 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.973

gttgatcaatatggctcggctgcggaaatagtggatg	CRISPR spacer
gttgatcaatatggctcggctgcggaaattgtggatg	Protospacer
***************************** *******

63. spacer 3.18|4339291|37|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030168 (Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.973

gttgatcaatatggctcggctgcggaaatagtggatg	CRISPR spacer
gttgatcaatatggctcggctgcggaaattgtggatg	Protospacer
***************************** *******

64. spacer 3.18|4339291|37|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020891 (Xanthomonas citri pv. citri strain TX160197 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.973

gttgatcaatatggctcggctgcggaaatagtggatg	CRISPR spacer
gttgatcaatatggctcggctgcggaaattgtggatg	Protospacer
***************************** *******

65. spacer 2.2|4333565|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NC_019933 (Xanthomonas phage CP1 DNA, complete genome) position: , mismatch: 2, identity: 0.944

acaacatcgccagccatagcaattacacttgctgca	CRISPR spacer
acaacatcgccggccatggcaattacacttgctgca	Protospacer
***********.*****.******************

66. spacer 2.13|4334284|35|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to MN335248 (Xanthomonas phage XaF13, complete genome) position: , mismatch: 2, identity: 0.943

tctctattggttgggcttgcgtcggttgggttact	CRISPR spacer
tctctgttggttgggcttgcgtcggttgggttgct	Protospacer
*****.**************************.**

67. spacer 2.16|4334484|37|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to MN335248 (Xanthomonas phage XaF13, complete genome) position: , mismatch: 2, identity: 0.946

tttacgcctgagggcaagaccatcgagcagtgcgata	CRISPR spacer
tttacgcctgagggcaagaccatcgagccgtgcgaca	Protospacer
**************************** ******.*

68. spacer 2.20|4334750|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041964 (Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1) position: , mismatch: 2, identity: 0.944

catcctgaccgacgccggtccgcgcatcacggagag	CRISPR spacer
cattctgaccgacgccggtccgcgcatcaccgagag	Protospacer
***.************************** *****

69. spacer 2.20|4334750|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022265 (Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plC, complete sequence) position: , mismatch: 2, identity: 0.944

catcctgaccgacgccggtccgcgcatcacggagag	CRISPR spacer
cattctgaccgacgccggtccgcgcatcaccgagag	Protospacer
***.************************** *****

70. spacer 2.20|4334750|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018857 (Xanthomonas citri pv. citri strain LH276 plasmid pLH276.3, complete sequence) position: , mismatch: 2, identity: 0.944

catcctgaccgacgccggtccgcgcatcacggagag	CRISPR spacer
cattctgaccgacgccggtccgcgcatcaccgagag	Protospacer
***.************************** *****

71. spacer 2.20|4334750|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012061 (Xanthomonas sp. ISO98C4 plasmid pNX59, complete sequence) position: , mismatch: 2, identity: 0.944

catcctgaccgacgccggtccgcgcatcacggagag	CRISPR spacer
cattctgaccgacgccggtccgcgcatcaccgagag	Protospacer
***.************************** *****

72. spacer 2.20|4334750|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020976 (Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA) position: , mismatch: 2, identity: 0.944

catcctgaccgacgccggtccgcgcatcacggagag	CRISPR spacer
cattctgaccgacgccggtccgcgcatcaccgagag	Protospacer
***.************************** *****

73. spacer 2.20|4334750|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020976 (Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA) position: , mismatch: 2, identity: 0.944

catcctgaccgacgccggtccgcgcatcacggagag	CRISPR spacer
cattctgaccgacgccggtccgcgcatcaccgagag	Protospacer
***.************************** *****

74. spacer 2.20|4334750|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012058 (Xanthomonas phaseoli pv. phaseoli strain ISO98C12 plasmid pXap59, complete sequence) position: , mismatch: 2, identity: 0.944

catcctgaccgacgccggtccgcgcatcacggagag	CRISPR spacer
cattctgaccgacgccggtccgcgcatcaccgagag	Protospacer
***.************************** *****

75. spacer 2.20|4334750|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012064 (Xanthomonas phaseoli pv. phaseoli strain ISO18C8 plasmid pXap59, complete sequence) position: , mismatch: 2, identity: 0.944

catcctgaccgacgccggtccgcgcatcacggagag	CRISPR spacer
cattctgaccgacgccggtccgcgcatcaccgagag	Protospacer
***.************************** *****

76. spacer 2.20|4334750|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012049 (Xanthomonas phaseoli pv. phaseoli strain ISO18C2 plasmid pXap59, complete sequence) position: , mismatch: 2, identity: 0.944

catcctgaccgacgccggtccgcgcatcacggagag	CRISPR spacer
cattctgaccgacgccggtccgcgcatcaccgagag	Protospacer
***.************************** *****

77. spacer 2.20|4334750|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018476 (Xanthomonas perforans strain LH3 plasmid pLH3.2, complete sequence) position: , mismatch: 2, identity: 0.944

catcctgaccgacgccggtccgcgcatcacggagag	CRISPR spacer
cattctgaccgacgccggtccgcgcatcaccgagag	Protospacer
***.************************** *****

78. spacer 2.20|4334750|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to CP020972 (Xanthomonas axonopodis pv. phaseoli strain CFBP6546R plasmid pA, complete sequence) position: , mismatch: 2, identity: 0.944

catcctgaccgacgccggtccgcgcatcacggagag	CRISPR spacer
cattctgaccgacgccggtccgcgcatcaccgagag	Protospacer
***.************************** *****

79. spacer 2.20|4334750|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018853 (Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.3, complete sequence) position: , mismatch: 2, identity: 0.944

catcctgaccgacgccggtccgcgcatcacggagag	CRISPR spacer
cattctgaccgacgccggtccgcgcatcaccgagag	Protospacer
***.************************** *****

80. spacer 2.20|4334750|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020968 (Xanthomonas phaseoli pv. phaseoli strain CFBP6164 plasmid pA, complete sequence) position: , mismatch: 2, identity: 0.944

catcctgaccgacgccggtccgcgcatcacggagag	CRISPR spacer
cattctgaccgacgccggtccgcgcatcaccgagag	Protospacer
***.************************** *****

81. spacer 2.20|4334750|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024080 (Xanthomonas citri pv. citri strain Xcc29-1 plasmid pXAC47, complete sequence) position: , mismatch: 2, identity: 0.944

catcctgaccgacgccggtccgcgcatcacggagag	CRISPR spacer
cattctgaccgacgccggtccgcgcatcaccgagag	Protospacer
***.************************** *****

82. spacer 2.20|4334750|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NC_020798 (Xanthomonas axonopodis Xac29-1 plasmid pXAC47, complete sequence) position: , mismatch: 2, identity: 0.944

catcctgaccgacgccggtccgcgcatcacggagag	CRISPR spacer
cattctgaccgacgccggtccgcgcatcaccgagag	Protospacer
***.************************** *****

83. spacer 2.28|4335279|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NC_010509 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD02, complete sequence) position: , mismatch: 2, identity: 0.944

attgtcgtgatcgccaaggctgttatccgcgctgta	CRISPR spacer
attgtcgtgatcgctaaggctgttatccgcgccgta	Protospacer
**************.*****************.***

84. spacer 2.40|4336070|35|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NC_019933 (Xanthomonas phage CP1 DNA, complete genome) position: , mismatch: 2, identity: 0.943

ataccgtcgcgtggcaagcccctgtagcttgatct	CRISPR spacer
ataccgtcgcgtggcaagcccttgcagcttgatct	Protospacer
*********************.**.**********

85. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034656 (Xanthomonas campestris pv. musacearum NCPPB 4379 plasmid pXCM49, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaaaaccagtcaatggggc	Protospacer
*********************************

86. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034656 (Xanthomonas campestris pv. musacearum NCPPB 4379 plasmid pXCM49, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaaaaccagtcaatgggac	Protospacer
*********************************

87. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018469 (Xanthomonas vesicatoria strain LM159 plasmid pLM159.3, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

88. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030179 (Xanthomonas citri pv. punicae strain LMG 859 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

89. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030179 (Xanthomonas citri pv. punicae strain LMG 859 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

90. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030179 (Xanthomonas citri pv. punicae strain LMG 859 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

91. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030160 (Xanthomonas citri pv. punicae strain BD0022 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

92. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030160 (Xanthomonas citri pv. punicae strain BD0022 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

93. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030160 (Xanthomonas citri pv. punicae strain BD0022 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

94. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018849 (Xanthomonas citri pv. citri strain LL074-4 plasmid pLL074-4.2, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

95. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018857 (Xanthomonas citri pv. citri strain LH276 plasmid pLH276.3, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

96. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NC_003921 (Xanthomonas citri pv. citri str. 306 plasmid pXAC33, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

97. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024031 (Xanthomonas citri pv. citri strain Xcc49 plasmid pXAC33, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

98. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006855 (Xanthomonas citri subsp. citri A306 plasmid pXAC33, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

99. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009011 (Xanthomonas citri pv. citri strain JX4 plasmid pXAC33, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

100. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008996 (Xanthomonas citri pv. citri strain MN12 plasmid pXAC33, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

101. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013665 (Xanthomonas citri pv. citri strain jx-6 plasmid pXAC33, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

102. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008999 (Xanthomonas citri pv. citri strain MN11 plasmid pXAC33, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

103. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024032 (Xanthomonas citri pv. citri strain Xcc29-1 plasmid pXAC33, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

104. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030167 (Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

105. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030167 (Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

106. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030167 (Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

107. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009014 (Xanthomonas citri pv. citri strain GD3 plasmid pXAC33, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

108. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NC_020801 (Xanthomonas axonopodis Xac29-1 plasmid pXAC33, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

109. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009008 (Xanthomonas citri pv. citri strain JX5 plasmid pXAC33, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

110. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013007 (Xanthomonas citri pv. malvacearum strain XcmN1003 plasmid pXcmN, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

111. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009002 (Xanthomonas citri pv. citri strain MN10 plasmid pXAC33, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

112. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008987 (Xanthomonas citri pv. citri strain UI7 plasmid pXAC33, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

113. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030170 (Xanthomonas citri pv. punicae strain BD0025 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

114. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030170 (Xanthomonas citri pv. punicae strain BD0025 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

115. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030170 (Xanthomonas citri pv. punicae strain BD0025 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

116. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030162 (Xanthomonas citri pv. punicae strain BD0023 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

117. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030162 (Xanthomonas citri pv. punicae strain BD0023 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

118. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP030162 (Xanthomonas citri pv. punicae strain BD0023 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

119. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023287 (Xanthomonas citri pv. citri strain 03-1638-1-1 plasmid pP2, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

120. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030165 (Xanthomonas citri pv. punicae strain LMG7439 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

121. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030165 (Xanthomonas citri pv. punicae strain LMG7439 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

122. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030165 (Xanthomonas citri pv. punicae strain LMG7439 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

123. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030165 (Xanthomonas citri pv. punicae strain LMG7439 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

124. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030165 (Xanthomonas citri pv. punicae strain LMG7439 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

125. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018860 (Xanthomonas citri pv. citri strain LH201 plasmid pLH201.2, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

126. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018852 (Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.2, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

127. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018853 (Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.3, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

128. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024080 (Xanthomonas citri pv. citri strain Xcc29-1 plasmid pXAC47, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

129. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023160 (Xanthomonas citri pv. malvacearum strain MS14003 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

130. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017023 (Xanthomonas citri pv. malvacearum strain MSCT plasmid pMSCT60kb, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

131. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NC_020798 (Xanthomonas axonopodis Xac29-1 plasmid pXAC47, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagtcaatgggca	Protospacer
******************* *************.*

132. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN811400 (Xanthomonas campestris pv. campestris isolate B-1459 plasmid I, complete sequence) position: , mismatch: 2, identity: 0.943

atcactgggctggcgggaaaaccagt--caatgggta	CRISPR spacer
atcactgggctggcgggaaaaccagtaccaatggg--	Protospacer
**************************  *******

133. spacer 1.2|26026|25|CP028127|PILER-CR matches to NZ_CP010990 (Pseudonocardia sp. EC080625-04 plasmid pFRP1-1, complete sequence) position: , mismatch: 3, identity: 0.88

ctcaccgagcgcggcagccaggtca	CRISPR spacer
ctcaccgagcacggcatccaggtcg	Protospacer
**********.***** *******.

134. spacer 1.2|26026|25|CP028127|PILER-CR matches to NZ_CP012186 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-1, complete sequence) position: , mismatch: 3, identity: 0.88

ctcaccgagcgcggcagccaggtca	CRISPR spacer
ctcaccgagcacggcatccaggtcg	Protospacer
**********.***** *******.

135. spacer 1.2|26026|25|CP028127|PILER-CR matches to NC_015314 (Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete sequence) position: , mismatch: 3, identity: 0.88

ctcaccgagcgcggcagccaggtca	CRISPR spacer
cacaccgagcgcggccgccacgtca	Protospacer
* ************* **** ****

136. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020986 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6992 plasmid pA, complete sequence) position: , mismatch: 3, identity: 0.914

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
accactgggctggcgggaacaccagtcaatgggga	Protospacer
*.***************** ************* *

137. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020986 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6992 plasmid pA, complete sequence) position: , mismatch: 3, identity: 0.914

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
accactgggctggcgggaacaccagtcaatgggga	Protospacer
*.***************** ************* *

138. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021017 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6991 plasmid pA, complete sequence) position: , mismatch: 3, identity: 0.914

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
accactgggctggcgggaacaccagtcaatgggga	Protospacer
*.***************** ************* *

139. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020982 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6989 plasmid pA, complete sequence) position: , mismatch: 3, identity: 0.914

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
accactgggctggcgggaacaccagtcaatgggga	Protospacer
*.***************** ************* *

140. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012061 (Xanthomonas sp. ISO98C4 plasmid pNX59, complete sequence) position: , mismatch: 3, identity: 0.914

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
accactgggctggcgggaacaccagtcaatgggga	Protospacer
*.***************** ************* *

141. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020990 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6996R plasmid pA, complete sequence) position: , mismatch: 3, identity: 0.914

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
accactgggctggcgggaacaccagtcaatgggga	Protospacer
*.***************** ************* *

142. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020980 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6988R plasmid pA, complete sequence) position: , mismatch: 3, identity: 0.914

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
accactgggctggcgggaacaccagtcaatgggga	Protospacer
*.***************** ************* *

143. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012058 (Xanthomonas phaseoli pv. phaseoli strain ISO98C12 plasmid pXap59, complete sequence) position: , mismatch: 3, identity: 0.914

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
accactgggctggcgggaacaccagtcaatgggga	Protospacer
*.***************** ************* *

144. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012064 (Xanthomonas phaseoli pv. phaseoli strain ISO18C8 plasmid pXap59, complete sequence) position: , mismatch: 3, identity: 0.914

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
accactgggctggcgggaacaccagtcaatgggga	Protospacer
*.***************** ************* *

145. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012049 (Xanthomonas phaseoli pv. phaseoli strain ISO18C2 plasmid pXap59, complete sequence) position: , mismatch: 3, identity: 0.914

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
accactgggctggcgggaacaccagtcaatgggga	Protospacer
*.***************** ************* *

146. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP020972 (Xanthomonas axonopodis pv. phaseoli strain CFBP6546R plasmid pA, complete sequence) position: , mismatch: 3, identity: 0.914

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
accactgggctggcgggaacaccagtcaatgggga	Protospacer
*.***************** ************* *

147. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020984 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6990 plasmid pA, complete sequence) position: , mismatch: 3, identity: 0.914

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
accactgggctggcgggaacaccagtcaatgggga	Protospacer
*.***************** ************* *

148. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020984 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6990 plasmid pA, complete sequence) position: , mismatch: 3, identity: 0.914

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
accactgggctggcgggaacaccagtcaatgggga	Protospacer
*.***************** ************* *

149. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020968 (Xanthomonas phaseoli pv. phaseoli strain CFBP6164 plasmid pA, complete sequence) position: , mismatch: 3, identity: 0.914

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
accactgggctggcgggaacaccagtcaatgggga	Protospacer
*.***************** ************* *

150. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP022268 (Xanthomonas citri pv. vignicola strain CFBP7112 plasmid plA, complete sequence) position: , mismatch: 3, identity: 0.914

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
atcactgggctggcgggaaccccagtcaatgggca	Protospacer
*******************  ************.*

151. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021019 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pA, complete sequence) position: , mismatch: 3, identity: 0.914

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
accactgggctggcgggaacaccagtcaatgggga	Protospacer
*.***************** ************* *

152. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020988 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6994R plasmid pA, complete sequence) position: , mismatch: 3, identity: 0.914

atcactgggctggcgggaaaaccagtcaatgggta	CRISPR spacer
accactgggctggcgggaacaccagtcaatgggga	Protospacer
*.***************** ************* *

153. spacer 1.2|26026|25|CP028127|PILER-CR matches to NZ_CP049358 (Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
catgccgagcgcggcagtcaggtca	Protospacer
* ..*************.*******

154. spacer 1.2|26026|25|CP028127|PILER-CR matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
tgcatcgcgcgcggcagccaggtca	Protospacer
. **.** *****************

155. spacer 1.2|26026|25|CP028127|PILER-CR matches to NZ_CP009855 (UNVERIFIED_ORG: Enterobacter cloacae strain ECNIH5 plasmid pENT-22e, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
tgcatcgagcgcggccgccaggtca	Protospacer
. **.********** *********

156. spacer 1.2|26026|25|CP028127|PILER-CR matches to NZ_CP008907 (Enterobacter hormaechei subsp. hoffmannii ECR091 plasmid pENT-4bd, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
tgcatcgagcgcggccgccaggtca	Protospacer
. **.********** *********

157. spacer 1.2|26026|25|CP028127|PILER-CR matches to NZ_CP031159 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
catgccgagcgcggcagtcaggtca	Protospacer
* ..*************.*******

158. spacer 1.2|26026|25|CP028127|PILER-CR matches to NC_016515 (Enterobacter ludwigii strain EcWSU1 plasmid pEcWSU1_A, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
tgcatcgagcgcggccgccaggtca	Protospacer
. **.********** *********

159. spacer 1.2|26026|25|CP028127|PILER-CR matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
tgcatcgcgcgcggcagccaggtca	Protospacer
. **.** *****************

160. spacer 1.2|26026|25|CP028127|PILER-CR matches to NC_009939 (Deinococcus geothermalis DSM 11300 plasmid pDGEO02, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
ctgaccgagcgcggcacccaggtgt	Protospacer
** ************* ******

161. spacer 1.2|26026|25|CP028127|PILER-CR matches to NC_008757 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
gtcaccgagcacgccagccaggtcg	Protospacer
 *********.** **********.

162. spacer 1.2|26026|25|CP028127|PILER-CR matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
gacgccgagcgcggcagccaggtga	Protospacer
  *.******************* *

163. spacer 1.2|26026|25|CP028127|PILER-CR matches to NZ_CP017991 (Enterobacter cloacae complex sp. ECNIH7 plasmid pENT-1ac, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
agcatcgagcgcggcagtcaggtca	Protospacer
  **.************.*******

164. spacer 1.2|26026|25|CP028127|PILER-CR matches to NZ_CP017104 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872c, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
gacaccgatcgcggcagccaggaca	Protospacer
  ****** ************* **

165. spacer 1.2|26026|25|CP028127|PILER-CR matches to CP006879 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602b, complete sequence) position: , mismatch: 4, identity: 0.84

ctcaccgagcgcggcagccaggtca	CRISPR spacer
gacaccgatcgcggcagccaggaca	Protospacer
  ****** ************* **

166. spacer 3.3|4338309|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to MN855814 (Myoviridae sp. isolate 234, complete genome) position: , mismatch: 4, identity: 0.882

gagatacgcgacatgattgcgtgggtgtacggct	CRISPR spacer
gagatacgcgacatgattgcatgggtatacggta	Protospacer
********************.*****.*****.

167. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018466 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.3, complete sequence) position: , mismatch: 4, identity: 0.886

atcactgggctggcgggaaaaccag-tcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagaccaatgggg-	Protospacer
******************* ***** .*******

168. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018466 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.3, complete sequence) position: , mismatch: 4, identity: 0.886

atcactgggctggcgggaaaaccag-tcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagaccaatgggg-	Protospacer
******************* ***** .*******

169. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NC_005240 (Xanthomonas citri plasmid pXcB, complete sequence) position: , mismatch: 4, identity: 0.886

atcactgggctggcgggaaaaccag-tcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagaccaatgggg-	Protospacer
******************* ***** .*******

170. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023156 (Xanthomonas citri pv. malvacearum strain AR81009 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.886

atcactgggctggcgggaaaaccag-tcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagaccaatgggg-	Protospacer
******************* ***** .*******

171. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020976 (Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA) position: , mismatch: 4, identity: 0.886

atcactgggctggcgggaaaaccag-tcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagaccaatgggg-	Protospacer
******************* ***** .*******

172. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011161 (Xanthomonas citri pv. aurantifolii strain FDC 1559 plasmid pXfc43, complete sequence) position: , mismatch: 4, identity: 0.886

atcactgggctggcgggaaaaccag-tcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagaccaatgggg-	Protospacer
******************* ***** .*******

173. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046021 (Xanthomonas citri pv. malvacearum strain HD-1 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.886

atcactgggctggcgggaaaaccag-tcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagaccaatgggg-	Protospacer
******************* ***** .*******

174. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018727 (Xanthomonas vesicatoria ATCC 35937 strain LMG911 plasmid pLMG911.2, complete sequence) position: , mismatch: 4, identity: 0.886

atcactgggctggcgggaaaaccag-tcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagaccaatgggg-	Protospacer
******************* ***** .*******

175. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012003 (Xanthomonas citri pv. aurantifolii strain 1566 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.886

atcactgggctggcgggaaaaccag-tcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagaccaatgggg-	Protospacer
******************* ***** .*******

176. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011164 (Xanthomonas citri pv. aurantifolii strain FDC 1609 plasmid pXfc37, complete sequence) position: , mismatch: 4, identity: 0.886

atcactgggctggcgggaaaaccag-tcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagaccaatgggg-	Protospacer
******************* ***** .*******

177. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013005 (Xanthomonas citri pv. malvacearum strain XcmH1005 plasmid pXcmH, complete sequence) position: , mismatch: 4, identity: 0.886

atcactgggctggcgggaaaaccag-tcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagaccaatgggg-	Protospacer
******************* ***** .*******

178. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020965 (Xanthomonas phaseoli pv. phaseoli strain CFBP412 plasmid pA, complete sequence) position: , mismatch: 4, identity: 0.886

atcactgggctggcgggaaaaccag-tcaatgggta	CRISPR spacer
atcactgggctggcgggaacaccagaccaatgggg-	Protospacer
******************* ***** .*******

179. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022265 (Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plC, complete sequence) position: , mismatch: 5, identity: 0.857

atcactgggctggcgggaaaaccag-tcaatgggta	CRISPR spacer
atcactggactggcgggaacaccagaccaatgggg-	Protospacer
********.********** ***** .*******

180. spacer 3.13|4338965|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018476 (Xanthomonas perforans strain LH3 plasmid pLH3.2, complete sequence) position: , mismatch: 5, identity: 0.857

atcactgggctggcgggaaaaccag-tcaatgggta	CRISPR spacer
atcactggactggcgggaacaccagaccaatgggg-	Protospacer
********.********** ***** .*******

181. spacer 1.2|26026|25|CP028127|PILER-CR matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 6, identity: 0.76

ctcaccgagcgcggcagccaggtca	CRISPR spacer
aggaccgagcgcggcagccagggat	Protospacer
   *******************

182. spacer 1.2|26026|25|CP028127|PILER-CR matches to NZ_CP049733 (Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence) position: , mismatch: 6, identity: 0.76

ctcaccgagcgcggcagccaggtca	CRISPR spacer
aggaccgagcgcggcagccagggat	Protospacer
   *******************

183. spacer 1.2|26026|25|CP028127|PILER-CR matches to NZ_CP053207 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence) position: , mismatch: 6, identity: 0.76

ctcaccgagcgcggcagccaggtca	CRISPR spacer
aggaccgagcgcggcagccagggat	Protospacer
   *******************

184. spacer 2.2|4333565|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NC_019489 (Lactobacillus phage Sha1, complete genome) position: , mismatch: 6, identity: 0.833

acaacatcgccagccatagcaattacacttgctgca	CRISPR spacer
atgtgatcgccagccatagcaactacacttgccgca	Protospacer
*..  *****************.*********.***

185. spacer 3.16|4339161|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NC_048197 (Erwinia phage vB_EhrS_49, complete genome) position: , mismatch: 6, identity: 0.824

gcgctcc-acgcggtcacgctctgcctgctcagca	CRISPR spacer
-tgcttcgatacggttacgctctgcctgctcagca	Protospacer
 .***.* *..****.*******************

186. spacer 2.5|4333764|33|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to MH595538 (Vibrio phage BONAISHI, complete genome) position: , mismatch: 7, identity: 0.788

ttctaatcccgaagaagtcctcgaaatccaccg	CRISPR spacer
ttggattcctgaaggagtcctcgaaatccaaag	Protospacer
**  * ***.****.***************  *

187. spacer 3.5|4338439|35|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NC_019933 (Xanthomonas phage CP1 DNA, complete genome) position: , mismatch: 7, identity: 0.8

agcgacagtgagtacgccaaggcagcgcagtacct	CRISPR spacer
aatacaactgagtacgccaaggcagcccagtacct	Protospacer
*...  * ****************** ********

188. spacer 2.2|4333565|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042244 (Crassaminicella sp. SY095 plasmid pCT01, complete sequence) position: , mismatch: 8, identity: 0.778

acaacatcgccagccatagcaattacacttgctgca	CRISPR spacer
accttgttcccagccattgcaattacacttgcagca	Protospacer
**  ..*. ******** ************** ***

189. spacer 2.21|4334817|34|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054620 (Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.765

----aagctcggcgccggttgtcgggatcgcgattggc	CRISPR spacer
tgtagagc----cgccgggtgtcgggatcgagattgac	Protospacer
    .***    ****** *********** *****.*

190. spacer 3.15|4339096|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to MK080312 (Salmonella phage Astrid, complete genome) position: , mismatch: 8, identity: 0.765

tccgccagggcgtcaatatcggcctgggtaaacc	CRISPR spacer
gcggcggcggcgtcaatatcagcctgagtaaaac	Protospacer
 * ** . ************.*****.***** *

191. spacer 3.15|4339096|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to MT074440 (Salmonella phage assan, complete genome) position: , mismatch: 8, identity: 0.765

tccgccagggcgtcaatatcggcctgggtaaacc	CRISPR spacer
gcggcggcggcgtcaatatcagcctgagtaaaac	Protospacer
 * ** . ************.*****.***** *

192. spacer 2.2|4333565|36|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to HQ332138 (Paenibacillus phage PG1 genomic sequence) position: , mismatch: 9, identity: 0.75

acaacatcgccagccatagcaattacacttgctgca	CRISPR spacer
atctttttgccagccatcgcaataacacttgctgcg	Protospacer
*.  . *.********* ***** ***********.

193. spacer 2.21|4334817|34|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009573 (Sphingomonas taxi strain ATCC 55669 plasmid STP2, complete sequence) position: , mismatch: 9, identity: 0.735

aagctcggcgccggttgtcgggatcgcgattggc	CRISPR spacer
agcgtccatcccggttggcgggatcgcgatgggc	Protospacer
*.  ** .. ******* ************ ***

194. spacer 2.16|4334484|37|CP028127|PILER-CR,CRISPRCasFinder,CRT matches to AM157767 (Uncultured bacterium IncP-1gamma plasmid QKH54 complete genome) position: , mismatch: 10, identity: 0.73

tttacgcctgagggcaagaccatcgagcagtgcgata	CRISPR spacer
attgagcatgagggcaagaccttcgagcagttgaagg	Protospacer
 **. ** ************* *********  .* .

195. spacer 3.14|4339031|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034364 (Pantoea sp. CCBC3-3-1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

ctgctgtgcacgtcgctcagctgcagcgactgcc	CRISPR spacer
agggtttgcccgtcgctcagctgcagccacattt	Protospacer
  * * *** ***************** **  ..

196. spacer 3.14|4339031|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034364 (Pantoea sp. CCBC3-3-1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

ctgctgtgcacgtcgctcagctgcagcgactgcc	CRISPR spacer
agggtttgcccgtcgctcagctgcagccacattt	Protospacer
  * * *** ***************** **  ..

197. spacer 3.14|4339031|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034364 (Pantoea sp. CCBC3-3-1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

ctgctgtgcacgtcgctcagctgcagcgactgcc	CRISPR spacer
agggtttgcccgtcgctcagctgcagccacattt	Protospacer
  * * *** ***************** **  ..

198. spacer 3.15|4339096|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016619 (Microvirga ossetica strain V5/3m plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

tccgccagggcgtcaatatcggcctgggtaaacc	CRISPR spacer
gcacgcatggcgtcgatatcggcctgggtcgccg	Protospacer
 *   ** ******.************** . *

199. spacer 3.15|4339096|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 10, identity: 0.706

tccgccagggcgtcaatatcggcctgggtaaacc	CRISPR spacer
tccgccagggcgccaacatcggccagaacactga	Protospacer
************.***.******* *...*

200. spacer 3.15|4339096|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.706

tccgccagggcgtcaatatcggcctgggtaaacc	CRISPR spacer
tccgccagggcgccaacatcggccagaacaccga	Protospacer
************.***.******* *...*

201. spacer 3.15|4339096|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 10, identity: 0.706

tccgccagggcgtcaatatcggcctgggtaaacc	CRISPR spacer
tccgccagggcgccaacatcggccagaacaccga	Protospacer
************.***.******* *...*

202. spacer 3.15|4339096|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.706

tccgccagggcgtcaatatcggcctgggtaaacc	CRISPR spacer
tccgccagggcgccaacatcggccagaacactga	Protospacer
************.***.******* *...*

203. spacer 3.16|4339161|34|CP028127|CRISPRCasFinder,CRT,PILER-CR matches to CP000621 (Burkholderia vietnamiensis G4 plasmid pBVIE05, complete sequence) position: , mismatch: 10, identity: 0.706

gcgctccacgcggtcacgctctgcctgctcagca	CRISPR spacer
ggcggcggtgcggtcacgctcggcctgctcggcg	Protospacer
*    * ..************ ********.**.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

632600 : 681731

Escherichia_phage(50.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVQ05728.1\|632600_632774_-\|transposase	IS3 family transposase	NA	NA	NA	NA
AVQ05729.1\|633673_635221_+	type III effector	NA	NA	NA	NA
AVQ05730.1\|635925_636306_+	hypothetical protein	NA	NA	NA	NA
AVQ05731.1\|636247_638113_+	peptidase S53	NA	NA	NA	NA
AVQ05732.1\|638168_638678_-	hypothetical protein	NA	NA	NA	NA
AVQ05733.1\|638726_639677_-	nucleoside-diphosphate sugar epimerase	NA	NA	NA	NA
AVQ05734.1\|639810_640401_+	malonic semialdehyde reductase	NA	NA	NA	NA
AVQ05735.1\|640610_641372_+	polyisoprenoid-binding protein	NA	NA	NA	NA
AVQ05736.1\|641766_642285_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
AVQ05737.1\|642277_643363_+	DUF4880 domain-containing protein	NA	NA	NA	NA
AVQ05738.1\|643620_646122_+	TonB-dependent receptor	NA	NA	NA	NA
AVQ05739.1\|646121_647402_+	histidine-type phosphatase	NA	NA	NA	NA
AVQ08965.1\|647474_648269_-	siderophore-interacting protein	NA	NA	NA	NA
AVQ08966.1\|648613_649153_-	PadR family transcriptional regulator	NA	NA	NA	NA
AVQ05740.1\|649346_650993_+	malonate decarboxylase subunit alpha	NA	NA	NA	NA
AVQ05741.1\|651002_651320_+	malonate decarboxylase acyl carrier protein	NA	NA	NA	NA
AVQ05742.1\|651426_652347_+	biotin-independent malonate decarboxylase subunit beta	NA	NA	NA	NA
AVQ05743.1\|652337_653042_+	biotin-independent malonate decarboxylase subunit gamma	NA	NA	NA	NA
AVQ05744.1\|653044_653686_+	malonate decarboxylase holo-[acyl-carrier-protein] synthase	NA	NA	NA	NA
AVQ05745.1\|653682_654552_+	triphosphoribosyl-dephospho-CoA synthase MdcB	NA	NA	NA	NA
AVQ05746.1\|654778_655699_+	malonate decarboxylase subunit epsilon	NA	NA	NA	NA
AVQ05747.1\|655786_657142_+	hypothetical protein	NA	NA	NA	NA
AVQ05748.1\|657221_657941_+	GntR family transcriptional regulator	NA	NA	NA	NA
AVQ05749.1\|658939_659359_-	anti-sigma factor antagonist	NA	NA	NA	NA
AVQ05750.1\|659355_659787_-	ATP-binding protein	NA	NA	NA	NA
AVQ05751.1\|659783_661808_-	HAMP domain-containing protein	NA	NA	NA	NA
AVQ05752.1\|661966_662626_+	hypothetical protein	NA	NA	NA	NA
AVQ05753.1\|662622_663948_+	lipase	NA	NA	NA	NA
AVQ05754.1\|664373_665375_+	arabinogalactan endo-1,4-beta-galactosidase	NA	NA	NA	NA
AVQ05755.1\|665477_665795_+	hypothetical protein	NA	NA	NA	NA
AVQ05756.1\|665886_668574_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
AVQ05757.1\|669403_669994_+	3'-5' exonuclease	NA	NA	NA	NA
AVQ08967.1\|670852_671954_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.0e-45	41.6
AVQ05758.1\|672445_673141_-	hypothetical protein	NA	NA	NA	NA
AVQ08968.1\|673137_674160_-	hypothetical protein	NA	NA	NA	NA
AVQ05759.1\|674540_675581_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	5.9e-78	47.1
AVQ05760.1\|675580_676381_+\|transposase	transposase	A0A2L1IVB6	Escherichia_phage	1.2e-83	59.9
AVQ05761.1\|676808_677953_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.8e-86	57.3
AVQ05762.1\|677951_678152_+	hypothetical protein	NA	NA	NA	NA
AVQ05763.1\|678262_680350_-	type III effector	NA	NA	NA	NA
AVQ05764.1\|680590_680773_-	hypothetical protein	NA	NA	NA	NA
AVQ05765.1\|680818_681046_+	hypothetical protein	NA	NA	NA	NA
AVQ05766.1\|681353_681731_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

1312400 : 1371246

uncultured_Mediterranean_phage(22.22%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVQ06248.1\|1312400_1313528_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
AVQ06249.1\|1313527_1314391_+\|protease	protease modulator HflC	NA	NA	NA	NA
AVQ06250.1\|1314902_1316195_+	adenylosuccinate synthase	A0A2R8FF47	Brazilian_cedratvirus	1.3e-74	38.0
AVQ06251.1\|1316627_1319297_+	M1 family peptidase	A0A0P0IY26	Acinetobacter_phage	1.5e-77	28.1
AVQ09008.1\|1319562_1320798_-	hemolysin	NA	NA	NA	NA
AVQ06252.1\|1320913_1321777_-	hypothetical protein	NA	NA	NA	NA
AVQ06253.1\|1322418_1323777_-	type I restriction endonuclease subunit S	NA	NA	NA	NA
AVQ06254.1\|1323766_1325311_-	SAM-dependent methyltransferase	A0A220A2U5	Liberibacter_phage	1.4e-14	24.5
AVQ06255.1\|1325307_1326510_-	DUF4172 domain-containing protein	A0A1V0E025	Clostridioides_phage	3.1e-06	27.0
AVQ06256.1\|1326598_1330072_-	type I restriction-modification system endonuclease	A0A1B1IW48	uncultured_Mediterranean_phage	1.2e-05	25.9
AVQ09010.1\|1330166_1330400_+	hypothetical protein	NA	NA	NA	NA
AVQ09009.1\|1330648_1330942_+	hypothetical protein	NA	NA	NA	NA
AVQ06257.1\|1333130_1333913_+	hypothetical protein	NA	NA	NA	NA
AVQ06258.1\|1334848_1335612_-\|transposase	IS5 family transposase	NA	NA	NA	NA
AVQ06259.1\|1335672_1336176_+	hypothetical protein	NA	NA	NA	NA
AVQ06260.1\|1336239_1336869_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AVQ09011.1\|1337083_1337863_+	histidine phosphatase family protein	NA	NA	NA	NA
AVQ06261.1\|1337862_1338732_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
AVQ09012.1\|1339270_1340749_+	glycosyl hydrolase	NA	NA	NA	NA
AVQ06262.1\|1340881_1342687_-	glycoside hydrolase family 15 protein	NA	NA	NA	NA
AVQ06263.1\|1342683_1343586_-	SDR family NAD(P)-dependent oxidoreductase	A0A2N9QUX2	Trichoplusia_ni_ascovirus	3.3e-77	53.0
AVQ06264.1\|1343772_1344213_+	DUF429 domain-containing protein	NA	NA	NA	NA
AVQ09013.1\|1344215_1344416_+	DUF429 domain-containing protein	NA	NA	NA	NA
AVQ06265.1\|1344552_1345536_-\|transposase	IS5/IS1182 family transposase	A0A077K814	Ralstonia_phage	5.3e-97	59.5
AVQ06266.1\|1345786_1346599_-	hypothetical protein	NA	NA	NA	NA
AVQ06267.1\|1349920_1350142_+	hypothetical protein	NA	NA	NA	NA
AVQ06268.1\|1350206_1350968_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AVQ06269.1\|1351083_1353420_-	glycoside hydrolase family 92 protein	NA	NA	NA	NA
AVQ06270.1\|1353663_1354644_-	KR domain-containing protein	NA	NA	NA	NA
AVQ06271.1\|1354805_1355435_+	alpha-ketoglutarate-dependent dioxygenase AlkB	NA	NA	NA	NA
AVQ06272.1\|1355638_1357348_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AVQ06273.1\|1357344_1357650_+	hypothetical protein	NA	NA	NA	NA
AVQ06274.1\|1357823_1358570_-	EAL domain-containing protein	NA	NA	NA	NA
AVQ06275.1\|1358716_1359355_+	HD domain-containing protein	NA	NA	NA	NA
AVQ06276.1\|1359606_1362132_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	3.3e-151	34.1
AVQ06277.1\|1362824_1368827_+	transducer protein car	NA	NA	NA	NA
AVQ06278.1\|1369204_1369591_-	hypothetical protein	NA	NA	NA	NA
AVQ09014.1\|1369780_1370017_+	hypothetical protein	NA	NA	NA	NA
AVQ06279.1\|1370262_1371246_-\|transposase	IS5/IS1182 family transposase	A0A077K814	Ralstonia_phage	2.4e-97	59.9

DBSCAN-SWA_3

2460269 : 2505876

Xanthomonas_phage(44.44%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVQ07123.1\|2460269_2460473_+	hypothetical protein	A0A1D6ZIU2	Xanthomonas_phage	1.1e-28	94.0
AVQ07124.1\|2460484_2460715_+	methyltransferase	A0A1W6DXZ2	Xanthomonas_phage	2.1e-28	93.4
AVQ07125.1\|2460852_2462250_+	hypothetical protein	A0A1D6ZIU5	Xanthomonas_phage	3.4e-198	84.8
AVQ07126.1\|2462249_2462579_+	DUF2523 domain-containing protein	A0A1D6ZIU0	Xanthomonas_phage	4.9e-55	99.1
AVQ07127.1\|2462578_2463772_+	hypothetical protein	A0A1W6DXR3	Xanthomonas_phage	3.1e-216	97.5
AVQ07128.1\|2463773_2464409_+	conjugal transfer protein	A0A1W6DY89	Xanthomonas_phage	7.7e-105	88.0
AVQ07129.1\|2464442_2464811_-	hypothetical protein	NA	NA	NA	NA
AVQ07130.1\|2464767_2465199_-	hypothetical protein	S0F2J2	Stenotrophomonas_phage	2.4e-25	49.6
AVQ07131.1\|2465426_2466497_+	replication protein	S0F3F7	Stenotrophomonas_phage	1.4e-58	40.1
AVQ07132.1\|2466605_2466896_+	hypothetical protein	NA	NA	NA	NA
AVQ07133.1\|2466905_2467106_+	hypothetical protein	NA	NA	NA	NA
AVQ07134.1\|2467134_2467362_+	hypothetical protein	NA	NA	NA	NA
AVQ07135.1\|2468022_2468886_+	hypothetical protein	B1NI80	Stenotrophomonas_phage	3.0e-59	60.1
AVQ07136.1\|2468893_2469217_+	DUF2523 domain-containing protein	NA	NA	NA	NA
AVQ07137.1\|2469239_2470280_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	5.9e-78	47.1
AVQ07138.1\|2470279_2471080_+\|transposase	transposase	A0A2L1IVB6	Escherichia_phage	1.2e-83	59.9
AVQ07139.1\|2471153_2472296_+	zonular occludens toxin	B1NI81	Stenotrophomonas_phage	2.4e-125	57.0
AVQ07140.1\|2472443_2472716_+	hypothetical protein	A0A1W6DXU7	Xanthomonas_phage	1.7e-08	42.6
AVQ07141.1\|2473666_2474059_-	DUF4124 domain-containing protein	A0A077JCA3	Xanthomonas_phage	6.9e-40	62.3
AVQ07142.1\|2474250_2474499_-	hypothetical protein	NA	NA	NA	NA
AVQ07143.1\|2474630_2474825_+	hypothetical protein	NA	NA	NA	NA
AVQ07144.1\|2476243_2476951_+	DNA-binding response regulator	NA	NA	NA	NA
AVQ07145.1\|2476947_2477940_+	cytochrome-c peroxidase	NA	NA	NA	NA
AVQ07146.1\|2477936_2480396_+	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	8.9e-16	30.8
AVQ07147.1\|2480509_2481490_+	LysR family transcriptional regulator	NA	NA	NA	NA
AVQ07148.1\|2481498_2482527_+	type VI secretion system protein TssA	NA	NA	NA	NA
AVQ07149.1\|2482699_2483026_-	hypothetical protein	NA	NA	NA	NA
AVQ07150.1\|2483022_2485920_-	serine/threonine protein kinase	A0A2R8FF19	Brazilian_cedratvirus	7.3e-09	24.1
AVQ07151.1\|2485916_2486639_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
AVQ07152.1\|2486635_2487289_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA
AVQ07153.1\|2487285_2490744_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
AVQ07154.1\|2490747_2492064_-	type VI secretion system protein TssL	NA	NA	NA	NA
AVQ07155.1\|2492065_2493403_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AVQ07156.1\|2493399_2494806_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
AVQ07157.1\|2494802_2495342_-	hypothetical protein	NA	NA	NA	NA
AVQ07158.1\|2495350_2497288_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	3.1e-40	29.2
AVQ07159.1\|2497498_2497960_-	hypothetical protein	NA	NA	NA	NA
AVQ07160.1\|2498059_2498266_-	hypothetical protein	NA	NA	NA	NA
AVQ07161.1\|2498885_2499569_-	hypothetical protein	NA	NA	NA	NA
AVQ07162.1\|2499782_2502485_-	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	8.1e-79	29.1
AVQ07163.1\|2502517_2503528_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AVQ07164.1\|2503491_2505369_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AVQ07165.1\|2505372_2505876_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_4

3666864 : 3691874

Escherichia_phage(50.0%)

transposase,integrase

attL 3673197:3673256|attR 3699684:3701657

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVQ07995.1\|3666864_3667074_-\|integrase	integrase	NA	NA	NA	NA
AVQ07996.1\|3667122_3668225_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.0e-45	41.6
AVQ07997.1\|3668269_3668974_-	hypothetical protein	NA	NA	NA	NA
AVQ09163.1\|3669007_3669292_-	XRE family transcriptional regulator	NA	NA	NA	NA
AVQ07998.1\|3669435_3670188_+	hypothetical protein	NA	NA	NA	NA
AVQ07999.1\|3670244_3670559_+	hypothetical protein	NA	NA	NA	NA
AVQ08000.1\|3670555_3670891_+	hypothetical protein	NA	NA	NA	NA
AVQ08001.1\|3671144_3672830_+	RNA-directed DNA polymerase	Q7M2A9	Enterobacteria_phage	3.1e-12	32.2
AVQ08002.1\|3673062_3673281_-	hypothetical protein	NA	NA	NA	NA
3673197:3673256	attL	NA	NA	NA	NA
AVQ08003.1\|3673279_3674320_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	5.9e-78	47.1
AVQ08004.1\|3674319_3675120_+\|transposase	transposase	A0A2L1IVB6	Escherichia_phage	1.2e-83	59.9
AVQ08005.1\|3675313_3676474_+	hypothetical protein	NA	NA	NA	NA
AVQ08006.1\|3676777_3677431_-	DUF3800 domain-containing protein	NA	NA	NA	NA
AVQ08007.1\|3677697_3679263_-\|integrase	integrase	NA	NA	NA	NA
AVQ09164.1\|3679937_3681011_+	hypothetical protein	NA	NA	NA	NA
AVQ08008.1\|3681809_3682187_+	hypothetical protein	U5N3F3	Enterobacteria_phage	2.9e-11	34.5
AVQ09165.1\|3682336_3683074_-	hypothetical protein	NA	NA	NA	NA
AVQ08009.1\|3683180_3685148_-	DUF3732 domain-containing protein	NA	NA	NA	NA
AVQ08010.1\|3685144_3685633_-	hypothetical protein	NA	NA	NA	NA
AVQ08011.1\|3685629_3686853_-	hypothetical protein	NA	NA	NA	NA
AVQ08012.1\|3689313_3690102_+	hypothetical protein	NA	NA	NA	NA
AVQ08013.1\|3690233_3690473_+	AlpA family phage regulatory protein	NA	NA	NA	NA
AVQ08014.1\|3691073_3691874_-\|transposase	transposase	A0A2L1IVB6	Escherichia_phage	1.2e-83	59.9
3699684:3701657	attR	NA	NA	NA	NA

DBSCAN-SWA_5

4040792 : 4047163

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVQ08262.1\|4040792_4042139_+	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	1.7e-32	26.5
AVQ08263.1\|4042184_4043588_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	5.5e-47	29.7
AVQ08264.1\|4043705_4044614_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.8e-27	35.1
AVQ08265.1\|4044610_4045168_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	8.6e-44	48.9
AVQ08266.1\|4045164_4046052_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	3.2e-93	57.1
AVQ08267.1\|4046107_4047163_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.5e-84	48.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP028127

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection