CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP027333	Escherichia coli strain 2013C-3277 plasmid unnamed2	0 crisprs	NA	0	0	0	0
CP027332	Escherichia coli strain 2013C-3277 plasmid unnamed1	0 crisprs	NA	0	0	0	0
CP027334	Escherichia coli strain 2013C-3277 plasmid unnamed3	0 crisprs	NA	0	0	0	0
CP027331	Escherichia coli strain 2013C-3277 chromosome, complete genome	4 crisprs	NA	0	7	0	0

1. CP027331

CRISPR-Cas detection and classification

Crispr_ID: CP027331_1

• CRISPR_ID: CP027331_1
• CRISPR_location: 1184209-1184332
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP027331_1

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

spacers of CP027331_1

>1.1|1184252|38|CP027331|CRISPRCasFinder
CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA

CRISPR arrays and Neighbor proteins around CP027331_1

CRISPR arrays

The CRISPR arrays of CP027331_1

>merge|CP027331|1|1184209-1184332|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>CP027331|1|1|1184209-1184332|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein sequences

Crispr_ID: CP027331_2

• CRISPR_ID: CP027331_2
• CRISPR_location: 2695291-2695563
• CRISPR_type: Orphan
• Repeat_type: I-E
• Spacer_info: 4 spacers

Consensus repeat of CP027331_2

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT

spacers of CP027331_2

>2.1|2695320|32|CP027331|PILER-CR,CRISPRCasFinder,CRT
AAAACCAAACTTCTCCATAAATTCCATAGCCG
>2.2|2695381|32|CP027331|PILER-CR,CRISPRCasFinder,CRT
GAGTCTATCAGCGACACTACCGGCAATAGCGA
>2.3|2695442|32|CP027331|PILER-CR,CRISPRCasFinder,CRT
GAGAGTGCTGACAGGTGTCTCGATTACCTGAT
>2.4|2695503|32|CP027331|PILER-CR,CRISPRCasFinder,CRT
GTCGGGCCGGGTAAGTGAACCTGTCGGTTTTC

CRISPR arrays and Neighbor proteins around CP027331_2

CRISPR arrays

The CRISPR arrays of CP027331_2

>merge|CP027331|2|2695291-2695563|PILER-CR,CRISPRCasFinder,CRT
CGGTTTATCCCCGCTGACGCGGGGAACACAAAACCAAACTTCTCCATAAATTCCATAGCCGCGGTTTATCCCCGCTGGCGCGGGGAACACGAGTCTATCAGCGACACTACCGGCAATAGCGACGGTTTATCCCCGCTGGCGCGGGGAACACGAGAGTGCTGACAGGTGTCTCGATTACCTGATCGGTTTATCCCCGCTGGCGCGGGGAACACGTCGGGCCGGGTAAGTGAACCTGTCGGTTTTCCGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP027331|2|1|2695291-2695563|PILER-CR
CGGTTTATCCCCGCTGACGCGGGGAACAC	AAAACCAAACTTCTCCATAAATTCCATAGCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGTCTATCAGCGACACTACCGGCAATAGCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGAGTGCTGACAGGTGTCTCGATTACCTGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGGGCCGGGTAAGTGAACCTGTCGGTTTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP027331|2|2|2695291-2695563|CRISPRCasFinder
CGGTTTATCCCCGCTGACGCGGGGAACAC	AAAACCAAACTTCTCCATAAATTCCATAGCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGTCTATCAGCGACACTACCGGCAATAGCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGAGTGCTGACAGGTGTCTCGATTACCTGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGGGCCGGGTAAGTGAACCTGTCGGTTTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP027331|2|1|2695291-2695563|CRT
CGGTTTATCCCCGCTGACGCGGGGAACAC	AAAACCAAACTTCTCCATAAATTCCATAGCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGTCTATCAGCGACACTACCGGCAATAGCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGAGTGCTGACAGGTGTCTCGATTACCTGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGGGCCGGGTAAGTGAACCTGTCGGTTTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein sequences

Crispr_ID: CP027331_3

• CRISPR_ID: CP027331_3
• CRISPR_location: 2721265-2721842
• CRISPR_type: Orphan
• Repeat_type: I-E
• Spacer_info: 9 spacers

Consensus repeat of CP027331_3

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGA	CRT
CGGTTTATCCCCGCTGGCGCGGGGA	PILER-CR

spacers of CP027331_3

>3.1|2721294|32|CP027331|CRISPRCasFinder
AACATCGGAAACGGCTTCGCGGCGGCGGCGTC
>3.2|2721355|32|CP027331|CRISPRCasFinder
GACAGAACGGCCTCAGTAGTCTCGTCAGGCTC
>3.3|2721416|32|CP027331|CRISPRCasFinder
TACGTGAAGAATATTTGCAACACCCGCAAGAA
>3.4|2721477|32|CP027331|CRISPRCasFinder
GGCATAGCCAGGCTGATCCGGCGACGGCCTTA
>3.5|2721538|32|CP027331|CRISPRCasFinder
AATCGTGTGTAAATTCGCGGCGGCTCCACTGG
>3.6|2721599|32|CP027331|CRISPRCasFinder
TGGTCGAAATATAGACAGCATGTTCCGTACCA
>3.7|2721660|32|CP027331|CRISPRCasFinder
ACACTATCCGGGCGGTATTACGCCCAAATATC
>3.8|2721721|32|CP027331|CRISPRCasFinder
CTGCCGGGTGAAACCACTCGCGGCAGATCTTG
>3.9|2721782|32|CP027331|CRISPRCasFinder
ACTACTGTCGGTAGCTGGGAGGATGAGGAGAT
>3.10|2721290|36|CP027331|CRT
GCTCAACATCGGAAACGGCTTCGCGGCGGCGGCGTC
>3.11|2721351|36|CP027331|CRT
ACTCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTC
>3.12|2721412|36|CP027331|CRT
GCTCTACGTGAAGAATATTTGCAACACCCGCAAGAA
>3.13|2721473|36|CP027331|CRT
GCTCGGCATAGCCAGGCTGATCCGGCGACGGCCTTA
>3.14|2721534|36|CP027331|CRT
ACACAATCGTGTGTAAATTCGCGGCGGCTCCACTGG
>3.15|2721595|36|CP027331|CRT
ACACTGGTCGAAATATAGACAGCATGTTCCGTACCA
>3.16|2721656|36|CP027331|CRT
ACACACACTATCCGGGCGGTATTACGCCCAAATATC
>3.17|2721717|36|CP027331|CRT
ACACCTGCCGGGTGAAACCACTCGCGGCAGATCTTG
>3.18|2721778|36|CP027331|CRT
ACACACTACTGTCGGTAGCTGGGAGGATGAGGAGAT
>3.19|2721291|36|CP027331|PILER-CR
GCTCAACATCGGAAACGGCTTCGCGGCGGCGGCGTC
>3.20|2721352|36|CP027331|PILER-CR
ACTCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTC
>3.21|2721413|36|CP027331|PILER-CR
GCTCTACGTGAAGAATATTTGCAACACCCGCAAGAA
>3.22|2721474|36|CP027331|PILER-CR
GCTCGGCATAGCCAGGCTGATCCGGCGACGGCCTTA
>3.23|2721535|36|CP027331|PILER-CR
ACACAATCGTGTGTAAATTCGCGGCGGCTCCACTGG
>3.24|2721596|36|CP027331|PILER-CR
ACACTGGTCGAAATATAGACAGCATGTTCCGTACCA
>3.25|2721657|36|CP027331|PILER-CR
ACACACACTATCCGGGCGGTATTACGCCCAAATATC
>3.26|2721718|36|CP027331|PILER-CR
ACACCTGCCGGGTGAAACCACTCGCGGCAGATCTTG
>3.27|2721779|36|CP027331|PILER-CR
ACACACTACTGTCGGTAGCTGGGAGGATGAGGAGAT

CRISPR arrays and Neighbor proteins around CP027331_3

CRISPR arrays

The CRISPR arrays of CP027331_3

>merge|CP027331|3|2721265-2721842|CRISPRCasFinder,CRT,PILER-CR
TGGTTTATCCCCGCTGGCGCGGGGAGCTCAACATCGGAAACGGCTTCGCGGCGGCGGCGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAGCTCTACGTGAAGAATATTTGCAACACCCGCAAGAACGGTTTATCCCCGCTGGCGCGGGGAGCTCGGCATAGCCAGGCTGATCCGGCGACGGCCTTACGGTTTATCCCCGCTGGCGCGGGGAACACAATCGTGTGTAAATTCGCGGCGGCTCCACTGGCGGTTTATCCCCGCTGGCGCGGGGAACACTGGTCGAAATATAGACAGCATGTTCCGTACCACGGTTTATCCCCGCTGGCGCGGGGAACACACACTATCCGGGCGGTATTACGCCCAAATATCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGCCGGGTGAAACCACTCGCGGCAGATCTTGCGGTTTATCCCCGCTGGCGCGGGGAACACACTACTGTCGGTAGCTGGGAGGATGAGGAGATCGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP027331|3|3|2721265-2721842|CRISPRCasFinder
TGGTTTATCCCCGCTGGCGCGGGGAGCTC	AACATCGGAAACGGCTTCGCGGCGGCGGCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GACAGAACGGCCTCAGTAGTCTCGTCAGGCTC
CGGTTTATCCCCGCTGGCGCGGGGAGCTC	TACGTGAAGAATATTTGCAACACCCGCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAGCTC	GGCATAGCCAGGCTGATCCGGCGACGGCCTTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCGTGTGTAAATTCGCGGCGGCTCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGTCGAAATATAGACAGCATGTTCCGTACCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACACTATCCGGGCGGTATTACGCCCAAATATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGCCGGGTGAAACCACTCGCGGCAGATCTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTACTGTCGGTAGCTGGGAGGATGAGGAGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP027331|3|2|2721265-2721838|CRT
TGGTTTATCCCCGCTGGCGCGGGGA	GCTCAACATCGGAAACGGCTTCGCGGCGGCGGCGTC
CGGTTTATCCCCGCTGGCGCGGGGA	ACTCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTC
CGGTTTATCCCCGCTGGCGCGGGGA	GCTCTACGTGAAGAATATTTGCAACACCCGCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGA	GCTCGGCATAGCCAGGCTGATCCGGCGACGGCCTTA
CGGTTTATCCCCGCTGGCGCGGGGA	ACACAATCGTGTGTAAATTCGCGGCGGCTCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGA	ACACTGGTCGAAATATAGACAGCATGTTCCGTACCA
CGGTTTATCCCCGCTGGCGCGGGGA	ACACACACTATCCGGGCGGTATTACGCCCAAATATC
CGGTTTATCCCCGCTGGCGCGGGGA	ACACCTGCCGGGTGAAACCACTCGCGGCAGATCTTG
CGGTTTATCCCCGCTGGCGCGGGGA	ACACACTACTGTCGGTAGCTGGGAGGATGAGGAGAT
CGGTTTATCCCCGCTGGCGCGGGGA

>CP027331|3|2|2721266-2721838|PILER-CR
GGTTTATCCCCGCTGGCGCGGGGAG	CTCAACATCGGAAACGGCTTCGCGGCGGCGGCGTCC
GGTTTATCCCCGCTGGCGCGGGGAA	CTCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTCC
GGTTTATCCCCGCTGGCGCGGGGAG	CTCTACGTGAAGAATATTTGCAACACCCGCAAGAAC
GGTTTATCCCCGCTGGCGCGGGGAG	CTCGGCATAGCCAGGCTGATCCGGCGACGGCCTTAC
GGTTTATCCCCGCTGGCGCGGGGAA	CACAATCGTGTGTAAATTCGCGGCGGCTCCACTGGC
GGTTTATCCCCGCTGGCGCGGGGAA	CACTGGTCGAAATATAGACAGCATGTTCCGTACCAC
GGTTTATCCCCGCTGGCGCGGGGAA	CACACACTATCCGGGCGGTATTACGCCCAAATATCC
GGTTTATCCCCGCTGGCGCGGGGAA	CACCTGCCGGGTGAAACCACTCGCGGCAGATCTTGC
GGTTTATCCCCGCTGGCGCGGGGAA	CACACTACTGTCGGTAGCTGGGAGGATGAGGAGATC
GGTTTATCCCCGCTGGCGCGGGGA

Protein sequences

Crispr_ID: CP027331_4

• CRISPR_ID: CP027331_4
• CRISPR_location: 4501602-4501748
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP027331_4

Consensus_repeat	Method
GTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	CRISPRCasFinder

spacers of CP027331_4

>4.1|4501653|45|CP027331|CRISPRCasFinder
TGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTTGCGC

CRISPR arrays and Neighbor proteins around CP027331_4

CRISPR arrays

The CRISPR arrays of CP027331_4

>merge|CP027331|4|4501602-4501748|CRISPRCasFinder
GTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCATGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

>CP027331|4|4|4501602-4501748|CRISPRCasFinder
GTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	TGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTTGCGC
GTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

Protein sequences

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP027331_1	1.1|1184252|38|CP027331|CRISPRCasFinder	1184252-1184289	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
CP027331_2	2.1|2695320|32|CP027331|PILER-CR,CRISPRCasFinder,CRT	2695320-2695351	32	NZ_CP050442	Tolypothrix sp. PCC 7910 plasmid unnamed2, complete sequence	41503-41534	6	0.812
CP027331_3	3.1|2721294|32|CP027331|CRISPRCasFinder	2721294-2721325	32	KR080197	Mycobacterium phage FlagStaff, complete genome	15476-15507	7	0.781
CP027331_3	3.1|2721294|32|CP027331|CRISPRCasFinder	2721294-2721325	32	NZ_CP014600	Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence	15418-15449	8	0.75
CP027331_3	3.2|2721355|32|CP027331|CRISPRCasFinder	2721355-2721386	32	MK814759	Gordonia phage Reyja, complete genome	4467-4498	8	0.75
CP027331_3	3.9|2721782|32|CP027331|CRISPRCasFinder	2721782-2721813	32	NC_012852	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132504, complete sequence	256608-256639	8	0.75
CP027331_2	2.3|2695442|32|CP027331|PILER-CR,CRISPRCasFinder,CRT	2695442-2695473	32	LT599585	Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid	32377-32408	9	0.719
CP027331_3	3.1|2721294|32|CP027331|CRISPRCasFinder	2721294-2721325	32	NZ_CP009292	Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence	139210-139241	9	0.719
CP027331_3	3.4|2721477|32|CP027331|CRISPRCasFinder	2721477-2721508	32	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	224876-224907	9	0.719
CP027331_3	3.9|2721782|32|CP027331|CRISPRCasFinder	2721782-2721813	32	NZ_CP050094	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b4, complete sequence	196778-196809	9	0.719
CP027331_3	3.9|2721782|32|CP027331|CRISPRCasFinder	2721782-2721813	32	NZ_CP050101	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b6, complete sequence	151768-151799	9	0.719
CP027331_3	3.9|2721782|32|CP027331|CRISPRCasFinder	2721782-2721813	32	NZ_CP050106	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence	508685-508716	9	0.719
CP027331_3	3.9|2721782|32|CP027331|CRISPRCasFinder	2721782-2721813	32	NZ_CP025016	Rhizobium leguminosarum strain Norway plasmid pRLN4, complete sequence	133778-133809	9	0.719
CP027331_3	3.9|2721782|32|CP027331|CRISPRCasFinder	2721782-2721813	32	NC_008379	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL9, complete sequence	180274-180305	9	0.719
CP027331_3	3.9|2721782|32|CP027331|CRISPRCasFinder	2721782-2721813	32	NZ_CP053442	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence	151061-151092	9	0.719
CP027331_3	3.9|2721782|32|CP027331|CRISPRCasFinder	2721782-2721813	32	NZ_CP018233	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed5, complete sequence	21422-21453	9	0.719
CP027331_3	3.9|2721782|32|CP027331|CRISPRCasFinder	2721782-2721813	32	NZ_CP025506	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence	499023-499054	9	0.719
CP027331_3	3.9|2721782|32|CP027331|CRISPRCasFinder	2721782-2721813	32	NZ_CP016293	Rhizobium leguminosarum strain Vaf10 plasmid unnamed5, complete sequence	106143-106174	9	0.719
CP027331_3	3.9|2721782|32|CP027331|CRISPRCasFinder	2721782-2721813	32	NZ_CP050111	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence	508869-508900	9	0.719
CP027331_3	3.9|2721782|32|CP027331|CRISPRCasFinder	2721782-2721813	32	NZ_CP048283	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248c, complete sequence	130036-130067	9	0.719
CP027331_3	3.9|2721782|32|CP027331|CRISPRCasFinder	2721782-2721813	32	NZ_CP030763	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence	172635-172666	9	0.719
CP027331_3	3.9|2721782|32|CP027331|CRISPRCasFinder	2721782-2721813	32	NZ_CP022668	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence	387130-387161	9	0.719
CP027331_3	3.9|2721782|32|CP027331|CRISPRCasFinder	2721782-2721813	32	NZ_CP022569	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK05, complete sequence	4795-4826	9	0.719
CP027331_3	3.9|2721782|32|CP027331|CRISPRCasFinder	2721782-2721813	32	NZ_CP050088	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence	158950-158981	9	0.719
CP027331_3	3.1|2721294|32|CP027331|CRISPRCasFinder	2721294-2721325	32	NZ_CP012383	Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence	14130-14161	10	0.688

1. spacer 1.1|1184252|38|CP027331|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

2. spacer 2.1|2695320|32|CP027331|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050442 (Tolypothrix sp. PCC 7910 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

aaaaccaaacttctccataaattccatagccg	CRISPR spacer
attactaaacttctgcataaattccataggag	Protospacer
*  **.******** **************  *

3. spacer 3.1|2721294|32|CP027331|CRISPRCasFinder matches to KR080197 (Mycobacterium phage FlagStaff, complete genome) position: , mismatch: 7, identity: 0.781

aacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
aacccggcgaacggcatcgcggcgccggcgtc	Protospacer
*** . * .****** ******** *******

4. spacer 3.1|2721294|32|CP027331|CRISPRCasFinder matches to NZ_CP014600 (Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

aacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
ggctgtggaaagggctgcgcggcggcggcgac	Protospacer
..*  .***** **** ************* *

5. spacer 3.2|2721355|32|CP027331|CRISPRCasFinder matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

-gacagaacggcctcagtagtctcgtcaggctc	CRISPR spacer
ccaccg-ctggccccagtagcctcgtcaggctt	Protospacer
  ** *  .****.******.***********.

6. spacer 3.9|2721782|32|CP027331|CRISPRCasFinder matches to NC_012852 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132504, complete sequence) position: , mismatch: 8, identity: 0.75

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggtgctgtcgggagcggggaggatgagagaat	Protospacer
. *.******* *** ***********...**

7. spacer 2.3|2695442|32|CP027331|PILER-CR,CRISPRCasFinder,CRT matches to LT599585 (Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid) position: , mismatch: 9, identity: 0.719

gagagtgctgacaggtgtctcgattacctgat	CRISPR spacer
ggctttgctggcaggtctctcgattaccttgg	Protospacer
*.   *****.***** ************ . 

8. spacer 3.1|2721294|32|CP027331|CRISPRCasFinder matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 9, identity: 0.719

aacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
cccgggaaaaacgggttcgcggcggcggcttc	Protospacer
  *.  ..****** ************** **

9. spacer 3.4|2721477|32|CP027331|CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcatagccaggctgatccggcgacggcctta	CRISPR spacer
gcagcagaccggctgatccggcgacggccccg	Protospacer
*  ..** * *******************...

10. spacer 3.9|2721782|32|CP027331|CRISPRCasFinder matches to NZ_CP050094 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b4, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

11. spacer 3.9|2721782|32|CP027331|CRISPRCasFinder matches to NZ_CP050101 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b6, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

12. spacer 3.9|2721782|32|CP027331|CRISPRCasFinder matches to NZ_CP050106 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

13. spacer 3.9|2721782|32|CP027331|CRISPRCasFinder matches to NZ_CP025016 (Rhizobium leguminosarum strain Norway plasmid pRLN4, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

14. spacer 3.9|2721782|32|CP027331|CRISPRCasFinder matches to NC_008379 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL9, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

15. spacer 3.9|2721782|32|CP027331|CRISPRCasFinder matches to NZ_CP053442 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

16. spacer 3.9|2721782|32|CP027331|CRISPRCasFinder matches to NZ_CP018233 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

17. spacer 3.9|2721782|32|CP027331|CRISPRCasFinder matches to NZ_CP025506 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

18. spacer 3.9|2721782|32|CP027331|CRISPRCasFinder matches to NZ_CP016293 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

19. spacer 3.9|2721782|32|CP027331|CRISPRCasFinder matches to NZ_CP050111 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

20. spacer 3.9|2721782|32|CP027331|CRISPRCasFinder matches to NZ_CP048283 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248c, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

21. spacer 3.9|2721782|32|CP027331|CRISPRCasFinder matches to NZ_CP030763 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

22. spacer 3.9|2721782|32|CP027331|CRISPRCasFinder matches to NZ_CP022668 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

23. spacer 3.9|2721782|32|CP027331|CRISPRCasFinder matches to NZ_CP022569 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK05, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

24. spacer 3.9|2721782|32|CP027331|CRISPRCasFinder matches to NZ_CP050088 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

25. spacer 3.1|2721294|32|CP027331|CRISPRCasFinder matches to NZ_CP012383 (Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence) position: , mismatch: 10, identity: 0.688

aacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
gaggacggaagcggcttcgccgcggcgggcaa	Protospacer
.* . *****.********* *******