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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP020096 Lactobacillus plantarum strain K25 plasmid unnamed3, complete sequence 1 crisprs NA 0 1 0 0
CP020095 Lactobacillus plantarum strain K25 plasmid unnamed2, complete sequence 0 crisprs NA 0 0 0 0
CP020098 Lactobacillus plantarum strain K25 plasmid unnamed5, complete sequence 0 crisprs NA 0 0 0 0
CP020097 Lactobacillus plantarum strain K25 plasmid unnamed4, complete sequence 0 crisprs NA 0 0 0 0
CP020099 Lactobacillus plantarum strain K25 plasmid unnamed6, complete sequence 0 crisprs NA 0 0 0 0
CP020093 Lactobacillus plantarum strain K25 chromosome, complete genome 2 crisprs NA 0 3 0 0
CP020094 Lactobacillus plantarum strain K25 plasmid unnamed1, complete sequence 1 crisprs NA 0 4 0 0

Results visualization

1. CP020096
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020096_1 31838-31994 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP031319 Lactobacillus plantarum strain DR7 plasmid unnamed1, complete sequence 27217-27299 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP029350 Lactobacillus plantarum strain HAC01 plasmid pLP-HAC01, complete sequence 2645-2727 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP023492 Lactobacillus plantarum strain NCIMB 700965 plasmid unamed2, complete sequence 1319-1401 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP014919 Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-4, complete sequence 2234-2316 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP035016 Lactobacillus plantarum strain 12_3 plasmid pldD, complete sequence 8775-8857 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP020096 Lactobacillus plantarum strain K25 plasmid unnamed3, complete sequence 31875-31957 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NC_015429 Lactobacillus buchneri NRRL B-30929 plasmid pLBUC02, complete sequence 17641-17723 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP032467 Lactobacillus plantarum strain ATG-K8 plasmid pK8, complete sequence 10898-10980 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP032467 Lactobacillus plantarum strain ATG-K8 plasmid pK8, complete sequence 43774-43856 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP026507 Lactobacillus plantarum strain NCIMB700965.EF.A plasmid punamed2, complete sequence 35987-36069 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP032465 Lactobacillus plantarum strain ATG-K6 plasmid pK6, complete sequence 8939-9021 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP032465 Lactobacillus plantarum strain ATG-K6 plasmid pK6, complete sequence 41815-41897 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP018868 Lactobacillus alimentarius DSM 20249 plasmid pLDW-11, complete sequence 5943-6025 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP018868 Lactobacillus alimentarius DSM 20249 plasmid pLDW-11, complete sequence 54801-54883 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP019723 Lactobacillus plantarum strain CLP0611 plasmid pUnnamed, complete sequence 30205-30287 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP028231 Lactobacillus plantarum strain SRCM101222 plasmid unnamed2, complete sequence 18509-18591 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP053913 Lactobacillus plantarum subsp. plantarum strain G1 plasmid p1, complete sequence 4550-4632 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP037432 Lactobacillus plantarum strain EM plasmid pEM3, complete sequence 20405-20487 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP037432 Lactobacillus plantarum strain EM plasmid pEM3, complete sequence 32434-32516 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP035575 Lactobacillus plantarum strain SRCM103303 plasmid unnamed4 27497-27579 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP013756 Lactobacillus plantarum strain DF plasmid unnamed3, complete sequence 12389-12471 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP013756 Lactobacillus plantarum strain DF plasmid unnamed3, complete sequence 60459-60541 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP013752 Lactobacillus plantarum strain KP plasmid unnamed3, complete sequence 33084-33166 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP023177 Lactobacillus plantarum strain BDGP2 plasmid pLtBDGP2C, complete sequence 2282-2364 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP028280 Lactobacillus plantarum strain SRCM100995 plasmid unnamed5, complete sequence 15336-15418 23 0.723
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP040738 Lactobacillus futsaii strain Y97 plasmid p2, complete sequence 9385-9467 24 0.711
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP035561 Lactobacillus plantarum strain SRCM103297 plasmid unnamed5 2455-2537 24 0.711
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP035561 Lactobacillus plantarum strain SRCM103297 plasmid unnamed5 44108-44190 24 0.711
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP014884 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-3, complete sequence 21803-21885 24 0.711
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP014875 Lactobacillus backii strain TMW 1.1989 plasmid pL11989-2, complete sequence 21765-21847 24 0.711
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP014627 Lactobacillus backii strain TMW 1.1988 plasmid L11988-3, complete sequence 5895-5977 24 0.711
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP014901 Lactobacillus backii strain TMW 1.2002 plasmid pL12002-2, complete sequence 12372-12454 24 0.711
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP028336 Lactobacillus plantarum strain SRCM101167 plasmid unnamed2, complete sequence 2281-2363 24 0.711
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP014892 Lactobacillus backii strain TMW 1.1992 plasmid pL11992-2, complete sequence 29785-29867 24 0.711
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NZ_CP032745 Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed1, complete sequence 39955-40037 34 0.59
CP020096_1 1.1|31875|83|CP020096|CRISPRCasFinder 31875-31957 83 NC_016607 Pediococcus claussenii ATCC BAA-344 plasmid pPECL-4, complete sequence 3707-3789 35 0.578

1. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP031319 (Lactobacillus plantarum strain DR7 plasmid unnamed1, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

2. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP029350 (Lactobacillus plantarum strain HAC01 plasmid pLP-HAC01, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

3. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP023492 (Lactobacillus plantarum strain NCIMB 700965 plasmid unamed2, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

4. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP014919 (Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-4, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

5. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP035016 (Lactobacillus plantarum strain 12_3 plasmid pldD, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

6. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP020096 (Lactobacillus plantarum strain K25 plasmid unnamed3, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

7. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NC_015429 (Lactobacillus buchneri NRRL B-30929 plasmid pLBUC02, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

8. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP032467 (Lactobacillus plantarum strain ATG-K8 plasmid pK8, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

9. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP032467 (Lactobacillus plantarum strain ATG-K8 plasmid pK8, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

10. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP026507 (Lactobacillus plantarum strain NCIMB700965.EF.A plasmid punamed2, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

11. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP032465 (Lactobacillus plantarum strain ATG-K6 plasmid pK6, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

12. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP032465 (Lactobacillus plantarum strain ATG-K6 plasmid pK6, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

13. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP018868 (Lactobacillus alimentarius DSM 20249 plasmid pLDW-11, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

14. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP018868 (Lactobacillus alimentarius DSM 20249 plasmid pLDW-11, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

15. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP019723 (Lactobacillus plantarum strain CLP0611 plasmid pUnnamed, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

16. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP028231 (Lactobacillus plantarum strain SRCM101222 plasmid unnamed2, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

17. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP053913 (Lactobacillus plantarum subsp. plantarum strain G1 plasmid p1, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

18. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP037432 (Lactobacillus plantarum strain EM plasmid pEM3, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

19. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP037432 (Lactobacillus plantarum strain EM plasmid pEM3, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

20. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP035575 (Lactobacillus plantarum strain SRCM103303 plasmid unnamed4) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

21. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP013756 (Lactobacillus plantarum strain DF plasmid unnamed3, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

22. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP013756 (Lactobacillus plantarum strain DF plasmid unnamed3, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

23. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP013752 (Lactobacillus plantarum strain KP plasmid unnamed3, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

24. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP023177 (Lactobacillus plantarum strain BDGP2 plasmid pLtBDGP2C, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

25. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP028280 (Lactobacillus plantarum strain SRCM100995 plasmid unnamed5, complete sequence) position: , mismatch: 23, identity: 0.723 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************************************************

26. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP040738 (Lactobacillus futsaii strain Y97 plasmid p2, complete sequence) position: , mismatch: 24, identity: 0.711 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccctttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
************************.***********************************

27. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP035561 (Lactobacillus plantarum strain SRCM103297 plasmid unnamed5) position: , mismatch: 24, identity: 0.711 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgtatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
******.*****************************************************

28. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP035561 (Lactobacillus plantarum strain SRCM103297 plasmid unnamed5) position: , mismatch: 24, identity: 0.711 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgtatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
******.*****************************************************

29. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP014884 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-3, complete sequence) position: , mismatch: 24, identity: 0.711 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaaacggacttctcaaaaagagaaacccg	Protospacer
**********************************.*************************

30. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP014875 (Lactobacillus backii strain TMW 1.1989 plasmid pL11989-2, complete sequence) position: , mismatch: 24, identity: 0.711 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaaacggacttctcaaaaagagaaacccg	Protospacer
**********************************.*************************

31. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP014627 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-3, complete sequence) position: , mismatch: 24, identity: 0.711 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaaacggacttctcaaaaagagaaacccg	Protospacer
**********************************.*************************

32. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP014901 (Lactobacillus backii strain TMW 1.2002 plasmid pL12002-2, complete sequence) position: , mismatch: 24, identity: 0.711 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaaacggacttctcaaaaagagaaacccg	Protospacer
**********************************.*************************

33. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP028336 (Lactobacillus plantarum strain SRCM101167 plasmid unnamed2, complete sequence) position: , mismatch: 24, identity: 0.711 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgtatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
******.*****************************************************

34. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP014892 (Lactobacillus backii strain TMW 1.1992 plasmid pL11992-2, complete sequence) position: , mismatch: 24, identity: 0.711 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
aacccgcatgataccgttgaaccccttggtacaaacggacttctcaaaaagagaaacccg	Protospacer
**********************************.*************************

35. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NZ_CP032745 (Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed1, complete sequence) position: , mismatch: 34, identity: 0.59 

aacccgcatgataccg-ttgaaccccttggtacaagcggacttctcaaaaagagaaaccc	CRISPR spacer
-gagccaatgaaatcgcctaaaccccttggtacaagcggacttctcaaaaagagaaaccc	Protospacer
 .  *  **** *.** .*.****************************************

36. spacer 1.1|31875|83|CP020096|CRISPRCasFinder matches to NC_016607 (Pediococcus claussenii ATCC BAA-344 plasmid pPECL-4, complete sequence) position: , mismatch: 35, identity: 0.578 

aacccgcatgataccgttgaaccccttggtacaagcggacttctcaaaaagagaaacccg	CRISPR spacer
gagccattaaaatcgcctgaaccccttggtacaagcggacttctcaaaaagagaaacccg	Protospacer
.* **..  .*  *  .*******************************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP020093
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020093_1 130949-131447 Orphan NA
7 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020093_2 1805023-1805324 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP020093_1 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131052-131081 30 NZ_CP032752 Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed1, complete sequence 44248-44277 0 1.0
CP020093_1 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131052-131081 30 NZ_CP021472 Pediococcus pentosaceus strain SRCM100892 plasmid pPC892-2, complete sequence 22320-22349 0 1.0
CP020093_1 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131052-131081 30 NZ_CP017356 Lactobacillus plantarum strain TMW 1.25 plasmid pL125-2, complete sequence 554-583 0 1.0
CP020093_1 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131052-131081 30 NZ_CP017366 Lactobacillus plantarum strain TMW 1.277 plasmid pL1277-3, complete sequence 3851-3880 0 1.0
CP020093_1 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131052-131081 30 NZ_CP017381 Lactobacillus plantarum strain TMW 1.1623 plasmid pL11623-2, complete sequence 5167-5196 0 1.0
CP020093_1 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131052-131081 30 NZ_CP018868 Lactobacillus alimentarius DSM 20249 plasmid pLDW-11, complete sequence 44155-44184 0 1.0
CP020093_1 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131052-131081 30 NZ_CP028231 Lactobacillus plantarum strain SRCM101222 plasmid unnamed2, complete sequence 7973-8002 0 1.0
CP020093_1 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131052-131081 30 NZ_CP035557 Lactobacillus plantarum strain SRCM103297 plasmid unnamed1 6645-6674 0 1.0
CP020093_1 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131052-131081 30 NZ_CP035557 Lactobacillus plantarum strain SRCM103297 plasmid unnamed1 48912-48941 0 1.0
CP020093_1 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131052-131081 30 NZ_CP021933 Lactobacillus plantarum strain TMW 1.1478 plasmid pL11478-1, complete sequence 52769-52798 0 1.0
CP020093_1 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131052-131081 30 NZ_CP016492 Lactobacillus pentosus strain BGM48 plasmid pBGM48-1, complete sequence 20119-20148 0 1.0
CP020093_1 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131052-131081 30 NC_022114 Lactobacillus paracasei subsp. paracasei 8700:2 plasmid 1, complete sequence 11474-11503 0 1.0
CP020093_1 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131052-131081 30 NZ_AP014682 Lactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid pLOOC260-2, complete sequence 11051-11080 0 1.0
CP020093_1 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131052-131081 30 NC_016608 Pediococcus claussenii ATCC BAA-344 plasmid pPECL-5, complete sequence 10937-10966 0 1.0
CP020093_1 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131052-131081 30 NZ_CP028242 Lactobacillus plantarum strain SRCM101518 plasmid unnamed1, complete sequence 8123-8152 0 1.0
CP020093_1 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131052-131081 30 NZ_CP035152 Pediococcus acidilactici strain SRCM103367 plasmid unnamed1 43974-44003 0 1.0
CP020093_1 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131052-131081 30 NZ_CP046657 Lactobacillus plantarum strain 123-17 plasmid p123-18.1, complete sequence 10801-10830 1 0.967
CP020093_1 1.6|131316|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131316-131345 30 NZ_CP013054 Sinorhizobium americanum CCGM7 plasmid C, complete sequence 284024-284053 4 0.867
CP020093_1 1.6|131316|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131316-131345 30 AB981169 Ralstonia phage RSY1 DNA, complete genome 19536-19565 6 0.8
CP020093_1 1.6|131316|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131316-131345 30 NC_049432 Ralstonia phage RsoM1USA, complete genome 13669-13698 6 0.8
CP020093_1 1.6|131316|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131316-131345 30 NZ_CP039965 Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence 1133280-1133309 6 0.8
CP020093_1 1.3|131118|30|CP020093|PILER-CR,CRISPRCasFinder,CRT 131118-131147 30 NZ_CP027853 Plesiomonas shigelloides strain MS-17-188 plasmid pPS-MS-17-188-1, complete sequence 118657-118686 8 0.733

1. spacer 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032752 (Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0 

gattaaatgcaagtactgtctttcgaatat	CRISPR spacer
gattaaatgcaagtactgtctttcgaatat	Protospacer
******************************

2. spacer 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021472 (Pediococcus pentosaceus strain SRCM100892 plasmid pPC892-2, complete sequence) position: , mismatch: 0, identity: 1.0 

gattaaatgcaagtactgtctttcgaatat	CRISPR spacer
gattaaatgcaagtactgtctttcgaatat	Protospacer
******************************

3. spacer 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017356 (Lactobacillus plantarum strain TMW 1.25 plasmid pL125-2, complete sequence) position: , mismatch: 0, identity: 1.0 

gattaaatgcaagtactgtctttcgaatat	CRISPR spacer
gattaaatgcaagtactgtctttcgaatat	Protospacer
******************************

4. spacer 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017366 (Lactobacillus plantarum strain TMW 1.277 plasmid pL1277-3, complete sequence) position: , mismatch: 0, identity: 1.0 

gattaaatgcaagtactgtctttcgaatat	CRISPR spacer
gattaaatgcaagtactgtctttcgaatat	Protospacer
******************************

5. spacer 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017381 (Lactobacillus plantarum strain TMW 1.1623 plasmid pL11623-2, complete sequence) position: , mismatch: 0, identity: 1.0 

gattaaatgcaagtactgtctttcgaatat	CRISPR spacer
gattaaatgcaagtactgtctttcgaatat	Protospacer
******************************

6. spacer 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018868 (Lactobacillus alimentarius DSM 20249 plasmid pLDW-11, complete sequence) position: , mismatch: 0, identity: 1.0 

gattaaatgcaagtactgtctttcgaatat	CRISPR spacer
gattaaatgcaagtactgtctttcgaatat	Protospacer
******************************

7. spacer 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028231 (Lactobacillus plantarum strain SRCM101222 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0 

gattaaatgcaagtactgtctttcgaatat	CRISPR spacer
gattaaatgcaagtactgtctttcgaatat	Protospacer
******************************

8. spacer 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035557 (Lactobacillus plantarum strain SRCM103297 plasmid unnamed1) position: , mismatch: 0, identity: 1.0 

gattaaatgcaagtactgtctttcgaatat	CRISPR spacer
gattaaatgcaagtactgtctttcgaatat	Protospacer
******************************

9. spacer 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035557 (Lactobacillus plantarum strain SRCM103297 plasmid unnamed1) position: , mismatch: 0, identity: 1.0 

gattaaatgcaagtactgtctttcgaatat	CRISPR spacer
gattaaatgcaagtactgtctttcgaatat	Protospacer
******************************

10. spacer 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021933 (Lactobacillus plantarum strain TMW 1.1478 plasmid pL11478-1, complete sequence) position: , mismatch: 0, identity: 1.0 

gattaaatgcaagtactgtctttcgaatat	CRISPR spacer
gattaaatgcaagtactgtctttcgaatat	Protospacer
******************************

11. spacer 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016492 (Lactobacillus pentosus strain BGM48 plasmid pBGM48-1, complete sequence) position: , mismatch: 0, identity: 1.0 

gattaaatgcaagtactgtctttcgaatat	CRISPR spacer
gattaaatgcaagtactgtctttcgaatat	Protospacer
******************************

12. spacer 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NC_022114 (Lactobacillus paracasei subsp. paracasei 8700:2 plasmid 1, complete sequence) position: , mismatch: 0, identity: 1.0 

gattaaatgcaagtactgtctttcgaatat	CRISPR spacer
gattaaatgcaagtactgtctttcgaatat	Protospacer
******************************

13. spacer 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014682 (Lactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid pLOOC260-2, complete sequence) position: , mismatch: 0, identity: 1.0 

gattaaatgcaagtactgtctttcgaatat	CRISPR spacer
gattaaatgcaagtactgtctttcgaatat	Protospacer
******************************

14. spacer 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NC_016608 (Pediococcus claussenii ATCC BAA-344 plasmid pPECL-5, complete sequence) position: , mismatch: 0, identity: 1.0 

gattaaatgcaagtactgtctttcgaatat	CRISPR spacer
gattaaatgcaagtactgtctttcgaatat	Protospacer
******************************

15. spacer 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028242 (Lactobacillus plantarum strain SRCM101518 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0 

gattaaatgcaagtactgtctttcgaatat	CRISPR spacer
gattaaatgcaagtactgtctttcgaatat	Protospacer
******************************

16. spacer 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035152 (Pediococcus acidilactici strain SRCM103367 plasmid unnamed1) position: , mismatch: 0, identity: 1.0 

gattaaatgcaagtactgtctttcgaatat	CRISPR spacer
gattaaatgcaagtactgtctttcgaatat	Protospacer
******************************

17. spacer 1.2|131052|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046657 (Lactobacillus plantarum strain 123-17 plasmid p123-18.1, complete sequence) position: , mismatch: 1, identity: 0.967 

gattaaatgcaagtactgtctttcgaatat	CRISPR spacer
gattaaatgcaggtactgtctttcgaatat	Protospacer
***********.******************

18. spacer 1.6|131316|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 4, identity: 0.867 

acgtcggcgaaatcttcacca----cgccgatta	CRISPR spacer
acgtcggcgaaatcttcaccaacaccgccg----	Protospacer
*********************    *****

19. spacer 1.6|131316|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to AB981169 (Ralstonia phage RSY1 DNA, complete genome) position: , mismatch: 6, identity: 0.8 

acgtcggcgaaatcttcaccacgccgatta	CRISPR spacer
ccatcggcgacatcctcaccacgccgatcg	Protospacer
 *.******* ***.*************..

20. spacer 1.6|131316|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NC_049432 (Ralstonia phage RsoM1USA, complete genome) position: , mismatch: 6, identity: 0.8 

acgtcggcgaaatcttcaccacgccgatta	CRISPR spacer
ccatgggcgacatcctcaccacgccgattg	Protospacer
 *.* ***** ***.**************.

21. spacer 1.6|131316|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8 

acgtcgg-cgaaatcttcaccacgccgatta	CRISPR spacer
-ggtcagtcgaaatattcaccacgccgatag	Protospacer
  ***.* ****** ************** .

22. spacer 1.3|131118|30|CP020093|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027853 (Plesiomonas shigelloides strain MS-17-188 plasmid pPS-MS-17-188-1, complete sequence) position: , mismatch: 8, identity: 0.733 

aattggaaatgtgagtgcatccgctgcatc	CRISPR spacer
cagtggacacgtgagtgcatccgctgtcag	Protospacer
 * **** *.****************.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP020094
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020094_1 11828-12018 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP020094_1 1.1|11868|48|CP020094|PILER-CR 11868-11915 48 NZ_CP020094 Lactobacillus plantarum strain K25 plasmid unnamed1, complete sequence 11855-11902 0 1.0
CP020094_1 1.2|11956|36|CP020094|PILER-CR 11956-11991 36 NZ_CP020094 Lactobacillus plantarum strain K25 plasmid unnamed1, complete sequence 11943-11978 0 1.0
CP020094_1 1.3|11855|50|CP020094|CRISPRCasFinder 11855-11904 50 NZ_CP020094 Lactobacillus plantarum strain K25 plasmid unnamed1, complete sequence 11855-11904 0 1.0
CP020094_1 1.4|11932|49|CP020094|CRISPRCasFinder 11932-11980 49 NZ_CP020094 Lactobacillus plantarum strain K25 plasmid unnamed1, complete sequence 11932-11980 0 1.0

1. spacer 1.1|11868|48|CP020094|PILER-CR matches to NZ_CP020094 (Lactobacillus plantarum strain K25 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0 

atttaagtaatattattttaaagtaataagctttgtataagtcttatc	CRISPR spacer
atttaagtaatattattttaaagtaataagctttgtataagtcttatc	Protospacer
************************************************

2. spacer 1.2|11956|36|CP020094|PILER-CR matches to NZ_CP020094 (Lactobacillus plantarum strain K25 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0 

ccactttaatgtaatatagcttatgtagaactagat	CRISPR spacer
ccactttaatgtaatatagcttatgtagaactagat	Protospacer
************************************

3. spacer 1.3|11855|50|CP020094|CRISPRCasFinder matches to NZ_CP020094 (Lactobacillus plantarum strain K25 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0 

atttaagtaatattattttaaagtaataagctttgtataagtcttatcac	CRISPR spacer
atttaagtaatattattttaaagtaataagctttgtataagtcttatcac	Protospacer
**************************************************

4. spacer 1.4|11932|49|CP020094|CRISPRCasFinder matches to NZ_CP020094 (Lactobacillus plantarum strain K25 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0 

tgacactaaaaccactttaatgtaatatagcttatgtagaactagatac	CRISPR spacer
tgacactaaaaccactttaatgtaatatagcttatgtagaactagatac	Protospacer
*************************************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage