CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP027104	Escherichia coli strain RM14715 chromosome, complete genome	1 crisprs	DEDDh,cas14j,DinG,cas3,c2c9_V-U4,csa3	0	1	10	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP027104_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027104_1

608280-608419

Orphan

Consensus_repeat	Method
TGTGTAGGTCGGATAAGGCGTTCACGTCGCATCCGACAATAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027104_1

>merge|CP027104|1|608280-608419|CRISPRCasFinder
TGTGTAGGTCGGATAAGGCGTTCACGTCGCATCCGACAATAACAGCCTTGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACA

>CP027104|1|1|608280-608419|CRISPRCasFinder
TGTGTAGGTCGGATAAGGCGTTCACGTCGCATCCGACAATAACA	GCCTTGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACGAGTTCAGTGC
TGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACA

Protein	Signature genes	Signature genes Name	Protein_function
CP027104.1\|AVV73859.1\|601190_602195_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
CP027104.1\|AVV73856.1\|596827_597832_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179366
CP027104.1\|AVV73858.1\|600693_601146_+\|YhcH/YjgK/YiaL-family-protein	unknown	unknown	gnl\|CDD\|225345
CP027104.1\|AVV73867.1\|611313_612396_+\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
CP027104.1\|AVV73865.1\|608435_609947_-\|cytosol-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
CP027104.1\|AVV73860.1\|602356_602773_+\|ribonuclease-E-inhibitor-RraB	unknown	unknown	gnl\|CDD\|236876
CP027104.1\|AVV73863.1\|604879_607735_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
CP027104.1\|AVV73869.1\|614188_615208_-\|aldehyde-reductase-Ahr	unknown	unknown	gnl\|CDD\|176186
CP027104.1\|AVV73874.1\|620842_621343_-\|transactivation-protein	unknown	unknown	gnl\|CDD\|137468
CP027104.1\|AVV73873.1\|620196_620769_-\|Polarity-suppression-protein	unknown	unknown	gnl\|CDD\|311413
CP027104.1\|AVV73855.1\|594764_595253_-\|ArgR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224355
CP027104.1\|AVV73868.1\|612556_614059_-\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
CP027104.1\|AVV73857.1\|597842_598787_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|183466
CP027104.1\|AVV73864.1\|607734_608178_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
CP027104.1\|AVV73861.1\|602949_603453_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP027104.1\|AVV73871.1\|616954_617620_-\|DUF2290-domain-containing-protein	unknown	unknown	gnl\|CDD\|370798
CP027104.1\|AVV73862.1\|603645_604833_+\|DUF898-domain-containing-protein	unknown	unknown	gnl\|CDD\|226719
CP027104.1\|AVV73872.1\|619877_620144_-\|hypothetical-protein	unknown	unknown	unknown
CP027104.1\|AVV73870.1\|615651_616908_+\|DUF4102-domain-containing-protein	unknown	unknown	gnl\|CDD\|170049
CP027104.1\|AVV73866.1\|610213_611314_+\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075

Protein	Function_ID	Function_description	E-value
CP027104.1\|AVV73859.1\|601190_602195_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
CP027104.1\|AVV73856.1\|596827_597832_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179366	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated.	0
CP027104.1\|AVV73858.1\|600693_601146_+\|YhcH/YjgK/YiaL-family-protein	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	1.7147e-64
CP027104.1\|AVV73867.1\|611313_612396_+\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
CP027104.1\|AVV73865.1\|608435_609947_-\|cytosol-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
CP027104.1\|AVV73860.1\|602356_602773_+\|ribonuclease-E-inhibitor-RraB	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	8.18116e-69
CP027104.1\|AVV73863.1\|604879_607735_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
CP027104.1\|AVV73869.1\|614188_615208_-\|aldehyde-reductase-Ahr	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	8.15216e-169
CP027104.1\|AVV73874.1\|620842_621343_-\|transactivation-protein	gnl\|CDD\|137468	PRK09678, PRK09678, DNA-binding transcriptional regulator; Provisional.	3.16396e-10
CP027104.1\|AVV73873.1\|620196_620769_-\|Polarity-suppression-protein	gnl\|CDD\|311413	pfam07455, Psu, Phage polarity suppression protein (Psu). This family contains a number of phage polarity suppression proteins (Psu) (approximately 190 residues long). The Psu protein of bacteriophage P4 causes suppression of transcriptional polarity in Escherichia coli by overcoming Rho termination factor activity.	1.04118e-52
CP027104.1\|AVV73855.1\|594764_595253_-\|ArgR-family-transcriptional-regulator	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	4.56237e-49
CP027104.1\|AVV73868.1\|612556_614059_-\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
CP027104.1\|AVV73857.1\|597842_598787_-\|carbamate-kinase	gnl\|CDD\|183466	PRK12354, PRK12354, carbamate kinase; Reviewed.	0
CP027104.1\|AVV73864.1\|607734_608178_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	5.53743e-66
CP027104.1\|AVV73861.1\|602949_603453_-\|N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.51706e-18
CP027104.1\|AVV73871.1\|616954_617620_-\|DUF2290-domain-containing-protein	gnl\|CDD\|370798	pfam10053, DUF2290, Uncharacterized conserved protein (DUF2290). Members of this family of hypothetical bacterial proteins have no known function.	2.31604e-66
CP027104.1\|AVV73862.1\|603645_604833_+\|DUF898-domain-containing-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	1.5064e-105
CP027104.1\|AVV73870.1\|615651_616908_+\|DUF4102-domain-containing-protein	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	4.84933e-83
CP027104.1\|AVV73866.1\|610213_611314_+\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0

>CP027104.1|AVV73864.1|607734_608178_-|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>CP027104.1|AVV73863.1|604879_607735_-|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRASAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIVDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>CP027104.1|AVV73862.1|603645_604833_+|DUF898-domain-containing-protein
MNDVNIGKDNSRHSFVFTGKGGEYFLICLVNFLLTIITMGIYGPWALIKCRRYIYQHVTLKGQPFSYKGTGGAIFVSMLLIVVVYLFSISCFAGQHFALGLFLFALLICGIPCMAVKSLQYQANMTSLNGIRFSFNCSMLRAWWVMLGLPVLLALVFWFALYLIAQVTTSIGGLFFNLVALSLLSAIGLGVVHGITYSKWMPLLGNNATFGIHKFSIQVNVKECIKGCMLAILTMVPFIIVIGIMIAPVFQQLMMMTMLGRSDAGSEFVLQYYPQIMASYFLYFVAILVFASYLYVTLRSLFLNNLTLANGTIRFHSSVTAIGMLLRMLAVLMGSSITCGLAYPWLKMWMVSWIANNTHVQGDLDSLELTNDDKPQDSGSLMWISRGIMPYVPFI
>CP027104.1|AVV73861.1|602949_603453_-|N-acetyltransferase
MNVVASPALRLRKLTVADNPAIAHVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLTGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLRKL
>CP027104.1|AVV73860.1|602356_602773_+|ribonuclease-E-inhibitor-RraB
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGIRH
>CP027104.1|AVV73859.1|601190_602195_-|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEARLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVAECSALAQKHGGKITLTEDIASGVKGADFIYTDVWVSMGEPKEKWAERIALLRDYQVNSKMMALTGNSQVKFLHCLPAFHDEQTTLGKKMAAEFGLYGGMEVTDEVFESPASIVFDQAENRMHTIKAVMVATLAK
>CP027104.1|AVV73858.1|600693_601146_+|YhcH/YjgK/YiaL-family-protein
MIVGNIHHLQSWLPEELREAIEYIKSHVSDETAKGKHAIDGDRLFYLISEDTTEPGELRRAEYHARYLDIQIVLKGQEGMTFSTQPASVPETDWLADKDIAFIGQGIDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKLLKA
>CP027104.1|AVV73857.1|597842_598787_-|carbamate-kinase
MENKPTLVIALGGNALLKRGEPLEAEIQRKNIDLAAKTIAQLTQHWRVVLVHGNGPQVGLLALQNSAYAHVAPYPLDILGAESQGMIGYMLQQALKNQLPQREISVLLTQVEVDANDPAFSNPTKYIGPIYDHAQTQVLQAEKGWVFKADGHSFRRVVPSPQPKRIVERDAIQTLIAHDHLVICNGGGGVPVVEKADGYHGIEAVIDKDLSAALLASQIHANALLILTDADAVYLDWGKPTQRPLAQVTPELLNEMQFDAGSMGPKVTACAKFVSQCRGIAGIGSLADGPEILAGDKGTLIRLDTPITTLDPFL
>CP027104.1|AVV73856.1|596827_597832_-|ornithine-carbamoyltransferase
MATSLKNRNFLKLLDYTPAEIQYLIDLAINLKAAKKSGNEKQTLVGKNIALIFEKSSTRTRCAFEVAAFDQGAQVTYIGPSGSQIGHKESMKDTARVLGRMYDGIEYRGYGQNIVEELGEFAGVPVWNGLTNEFHPTQILADLMTMLEHAPGKTLPELSFAYLGDARNNMGNSLMVGAAKMGMDIRLVAPKSFWPDEALVTQCREIASVTGARITLTEDVEEGVYDVDFLYTDVWVSMGEPKEAWAERVSLMAPYQINQQVITATRNPEVKFMHCLPAFHNEHTTVGREIEMAYGLKGLEVTEEVFESAHSIVFDEAENRMHTIKAVMVATLGD
>CP027104.1|AVV73855.1|594764_595253_-|ArgR-family-transcriptional-regulator
MKEYDDYSAKEKKQLAVCQRLITEKSYLSQEEIRRDLQNHGFDSISQSTVSRLLKLLGVIKIRNTKGQKIYSVNPQLLPTPDAGRSVAEMVLSVEHNGEFILIHTVAGYGRAVARILDFHALPEILGVIAGSNIVWVAPRVVKRTALVHKQINYLLKLNIYS
>CP027104.1|AVV73865.1|608435_609947_-|cytosol-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>CP027104.1|AVV73866.1|610213_611314_+|LPS-export-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>CP027104.1|AVV73867.1|611313_612396_+|LPS-export-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>CP027104.1|AVV73868.1|612556_614059_-|DUF853-domain-containing-protein
MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGIAQAGTTSEKLLARLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPTFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDDVDRESAYEMLQKGFQASIEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR
>CP027104.1|AVV73869.1|614188_615208_-|aldehyde-reductase-Ahr
MSMIKSYAAKEAGGELEVYEYDPGELKPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKTLAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADF
>CP027104.1|AVV73870.1|615651_616908_+|DUF4102-domain-containing-protein
MKLNARQVETAKPKEKNYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKAEQKQAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRLLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKVRHYPALPSSRLPEFLSRLAAYRGRVMTRIAVELSLLTFVRSSELRFARWNEFDFDKALWRVPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLEQLKQISGDKELLFPGDHDATKVMSENTVNNALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDANLHTKITPFDFAKKS
>CP027104.1|AVV73871.1|616954_617620_-|DUF2290-domain-containing-protein
MLTLREIHADILDVTEKVISVGLSNKENYPNVENLGNGISQIGISGVSDLAVALKKVPYKDLYAALEHAKFYNFILADGGIIQMIYVFKNNVIQKHKLAYFPSPDFESFQSESELYMDDCIYVEILDKRVIPVAVRFDYDCTPGTFKDLVHPKSHLTLGQYENCRIPVCSPITPSLFIEFILRSFYNTALMNFSDKINLKMKRFQETATILEKDRIHIRVK
>CP027104.1|AVV73872.1|619877_620144_-|hypothetical-protein
MHGFACVFLPHFLQTAPFPARPERVSATALKPPRKAGGRGGESTARQQKSIYFNGLVRRMLRKINRVLWIRLRSLIGFRGGQAWSEGH
>CP027104.1|AVV73873.1|620196_620769_-|Polarity-suppression-protein
MESTALQQAFDTCQNNKAAWLQHKNELAAAEQEYLRLLSGEGRNVSRLDELRNIIEVRKWQVNQAASRYIRSHEAVQHISIRDRLNDFMQQHGTVLAAALAPELMGYSELTVIARNCAIQRATDALREALLSWLAKGEKINYSAQDSDILTTIGFRPDAASVDDSREKFTPAQNMIFSRKSAQLASHQSV
>CP027104.1|AVV73874.1|620842_621343_-|transactivation-protein
MIYCPSCGHVAHTRRAHFMDDGTKIMIAQCRNIYCSATFEASESFFSDSKDSGMEYISGKQRYRDSLTSASGSMKRPKRMLVTGYCCRRCKGLALSRTSRRLSQEVTERFYVCTDPGCGLVFKTLQTINRFIVRPVTPDELAEHLHEKQELPPVRLKTQSYSLRLE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12113-12164	10	0.808
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	272-323	10	0.808
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31252-31303	10	0.808
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4115-4166	11	0.788
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4114-4165	11	0.788
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4114-4165	11	0.788
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4114-4165	11	0.788
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	152-203	11	0.788
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208982-209033	12	0.769
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	44-95	12	0.769
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219476-219527	12	0.769
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	43-94	12	0.769
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	18332-18383	12	0.769
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210310-210361	12	0.769
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	43-94	12	0.769
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191265-191316	12	0.769
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	43-94	12	0.769
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7393-7444	12	0.769
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84217-84268	12	0.769
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3373-3424	13	0.75
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3372-3423	13	0.75
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	15000-15051	13	0.75
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3372-3423	13	0.75
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3372-3423	13	0.75
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	70-121	14	0.731
CP027104_1	1.1\|608324\|52\|CP027104\|CRISPRCasFinder	608324-608375	52	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30159-30210	14	0.731

1. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 10, identity: 0.808

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
tcggtgcctgatgcgacgctggcgcgtcttatcaggcctacgagtcgcccgt	Protospacer
 *  ***************** ***********************.   .*.

2. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 10, identity: 0.808

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
tcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaaa-ccgttacc	Protospacer
 *  *************************************.*. .*. *.*

3. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 10, identity: 0.808

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc--	CRISPR spacer
tcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacag--ccgttgcca	Protospacer
 *  *************************************..  .*. ***

4. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
cagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaactt-gtgcc	Protospacer
    ***************** ************ ******.*..*. ****

5. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
cagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaactt-gtgcc	Protospacer
    ***************** ************ ******.*..*. ****

6. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
cagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaactt-gtgcc	Protospacer
    ***************** ************ ******.*..*. ****

7. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
cagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaactt-gtgcc	Protospacer
    ***************** ************ ******.*..*. ****

8. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
ttgaagcctgatgcgacgctgacgcgtcttatcaggcctacnagacccgagc	Protospacer
 .   **************** ******************* ** .* * **

9. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******************    .** **.

10. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

11. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******************    .** **.

12. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

13. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

14. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******************    .** **.

15. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

16. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******************    .** **.

17. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

18. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc---	CRISPR spacer
cggatgcctgatgcgacgctggcgcgtcttatcatgcctacaaa---actgcact	Protospacer
    ***************** ************ ******.*.   * ***

19. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc---	CRISPR spacer
cggatgcctgatgcgacgctggcgcgtcttatcatgcctacaaa---actgcact	Protospacer
    ***************** ************ ******.*.   * ***

20. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

21. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

22. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

23. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

24. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

25. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 14, identity: 0.731

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
ccgatgcctgatgcgacgctgacgcgtcttatcatgcctacggacctgaacc	Protospacer
 *  ***************** ************ *******.......  *

26. spacer 1.1|608324|52|CP027104|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 14, identity: 0.731

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaatctgcaccc	Protospacer
 .  ***************** ************ ******.* .*  .. *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

620196 : 630090

Enterobacteria_phage(80.0%)

transposase,integrase

attL 610685:610700|attR 636380:636395

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
610685:610700	attL	NA	NA	NA	NA
AVV73873.1\|620196_620769_-	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	7.9e-93	94.6
AVV73874.1\|620842_621343_-	transactivation protein	NA	NA	NA	NA
AVV73875.1\|621339_622074_-	glycoprotein 3	Q7M2A2	Enterobacteria_phage	1.1e-128	97.1
AVV73876.1\|622625_622892_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	4.9e-45	100.0
AVV73877.1\|622888_623479_+	Ash-like/host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	2.0e-59	89.6
AVV73878.1\|623471_623759_+	Derepression protein	Q7M2A0	Enterobacteria_phage	8.6e-48	97.9
AVV73879.1\|623751_624207_+	hypothetical protein	Q7M298	Enterobacteria_phage	1.6e-64	99.1
AVV73880.1\|624342_624663_+	hypothetical protein	NA	NA	NA	NA
AVV73881.1\|624677_627011_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	98.7
AVV73882.1\|627216_627552_+\|integrase	integrase	Q38404	Enterobacteria_phage	3.9e-23	96.1
AVV73883.1\|627767_628907_+	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	1.1e-74	43.1
AVV73884.1\|628876_630090_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	6.8e-102	57.8
636380:636395	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1032227 : 1102278

Enterobacteria_phage(34.67%)

tail,head,plate,protease,capsid,holin,terminase,integrase,transposase,portal

attL 1051747:1051805|attR 1092882:1092940

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVV74228.1\|1032227_1033575_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.3e-74	52.4
AVV74229.1\|1034189_1035506_+	flagellar hook protein	NA	NA	NA	NA
AVV74230.1\|1035528_1035921_+	flagellar export chaperone FliS	NA	NA	NA	NA
AVV74231.1\|1035925_1036237_+	flagellar protein FliT	NA	NA	NA	NA
AVV74232.1\|1036233_1037295_+	flagellar hook-length control protein FliK	NA	NA	NA	NA
AVV74233.1\|1037302_1037770_+	flagellar basal body protein FliL	NA	NA	NA	NA
AVV74234.1\|1037789_1038506_+	FliA/WhiG family RNA polymerase sigma factor	NA	NA	NA	NA
AVV74235.1\|1038518_1039382_+	flagellar motor stator protein MotA	NA	NA	NA	NA
AVV74236.1\|1039384_1040308_+	putative lateral flagellar export/assembly protein LafU	NA	NA	NA	NA
AVV74237.1\|1040378_1041434_+	DNA polymerase IV	NA	NA	NA	NA
AVV74238.1\|1041430_1041883_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AVV74239.1\|1042061_1043213_+	RNA ligase RtcB family protein	A0A222ZMP7	Mycobacterium_phage	3.5e-31	31.8
AVV74240.1\|1043209_1043824_+	peptide chain release factor H	NA	NA	NA	NA
AVV74241.1\|1043880_1045338_-	cytosol nonspecific dipeptidase	NA	NA	NA	NA
AVV74242.1\|1045598_1046057_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA
AVV74243.1\|1047449_1047851_+	sigma factor-binding protein Crl	NA	NA	NA	NA
AVV74244.1\|1047889_1048945_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	3.5e-118	60.6
AVV74245.1\|1049233_1050337_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
AVV74246.1\|1050348_1051602_+	gamma-glutamyl-phosphate reductase	A0A1X9I5D4	Streptococcus_phage	5.8e-96	47.5
1051747:1051805	attL	NA	NA	NA	NA
AVV77663.1\|1051806_1052745_-\|integrase	site-specific integrase	U5P434	Shigella_phage	4.7e-183	99.7
AVV74247.1\|1052846_1053227_-	DNA-binding protein	M1FJ59	Enterobacteria_phage	2.5e-58	96.6
AVV74248.1\|1053168_1053447_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	4.9e-48	97.8
AVV74249.1\|1053494_1053713_-	conjugal transfer protein TraR	M1FQT7	Enterobacteria_phage	4.1e-34	94.4
AVV74250.1\|1053811_1054093_-	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	5.5e-47	98.9
AVV74251.1\|1054103_1054661_-	phage N-6-adenine-methyltransferase	E5AGF8	Erwinia_phage	2.0e-61	62.3
AVV74252.1\|1054653_1054815_-	DUF1317 domain-containing protein	A0A0P0ZAS9	Stx2-converting_phage	9.1e-23	100.0
AVV74253.1\|1054811_1055492_-	exonuclease	A0A0N6WET1	Escherichia_phage	4.6e-132	99.6
AVV74254.1\|1055488_1056274_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
AVV74255.1\|1056279_1056576_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.4e-48	98.0
AVV74256.1\|1056651_1056858_-	cell division inhibitor protein	K7P6H3	Enterobacteria_phage	3.2e-28	85.3
AVV74257.1\|1057025_1057307_-	hypothetical protein	NA	NA	NA	NA
AVV74258.1\|1057332_1057716_-	hypothetical protein	NA	NA	NA	NA
AVV74259.1\|1057715_1058186_-	DUF4065 domain-containing protein	D0UIM3	Aggregatibacter_phage	5.6e-20	40.1
AVV77664.1\|1058474_1059167_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.5e-109	86.1
AVV74260.1\|1059277_1059505_+	transcriptional regulator	Q76H55	Enterobacteria_phage	3.8e-22	69.0
AVV74261.1\|1059535_1060075_+	regulator	M9NZI6	Enterobacteria_phage	8.9e-62	66.7
AVV74262.1\|1060071_1061091_+	Replication protein O	A0A0M5M7Y1	Salmonella_phage	2.0e-110	63.8
AVV74263.1\|1061087_1061789_+	Replication protein P	Q9EYB6	Enterobacteria_phage	1.9e-128	98.7
AVV74264.1\|1061785_1062079_+	protein ren	A0A0N6WES4	Escherichia_phage	2.9e-43	95.7
AVV74265.1\|1062075_1062276_+	hypothetical protein	NA	NA	NA	NA
AVV74266.1\|1062272_1062503_+	hypothetical protein	Q286X0	Escherichia_phage	2.3e-27	78.9
AVV74267.1\|1062909_1063296_+	hypothetical protein	K7P7J4	Enterobacteria_phage	1.5e-10	72.3
AVV74268.1\|1063347_1063716_+	hypothetical protein	M9NZE4	Enterobacteria_phage	6.2e-06	32.5
AVV74269.1\|1064011_1064521_+	hypothetical protein	NA	NA	NA	NA
AVV74270.1\|1064610_1064712_+	hypothetical protein	NA	NA	NA	NA
AVV74271.1\|1064708_1065164_+	hypothetical protein	I6PD71	Cronobacter_phage	5.4e-60	67.5
AVV74272.1\|1065163_1065334_+	hypothetical protein	K7P7K0	Enterobacteria_phage	5.3e-13	67.9
AVV74273.1\|1065326_1065617_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	3.3e-47	94.8
AVV74274.1\|1065613_1065976_+	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	3.3e-60	95.7
AVV74275.1\|1065972_1066113_+	hypothetical protein	K7PHH3	Enterobacteria_phage	5.0e-09	68.9
AVV74276.1\|1066109_1066799_+	antitermination protein	I6PDF8	Cronobacter_phage	1.7e-57	48.9
AVV74277.1\|1067108_1067426_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	3.3e-40	86.1
AVV74278.1\|1067412_1067889_+	lysozyme	K7PKV2	Enterobacteria_phage	2.3e-85	96.2
AVV74279.1\|1068377_1068671_-	lipoprotein bor	K7PL54	Enterobacteria_phage	2.0e-44	91.8
AVV74280.1\|1068763_1068904_+	Rz1 lytic protein	U5P461	Shigella_phage	2.2e-09	78.6
AVV74281.1\|1069196_1069547_+	HNH endonuclease	M1FQV2	Enterobacteria_phage	3.1e-63	96.6
AVV74282.1\|1069663_1070167_+\|terminase	phage terminase small subunit P27 family	U5P067	Shigella_phage	2.3e-88	99.4
AVV74283.1\|1070163_1071897_+\|terminase	terminase	U5P0Q5	Shigella_phage	0.0e+00	98.6
AVV74284.1\|1071908_1072091_+	hypothetical protein	M1FJ83	Enterobacteria_phage	1.7e-25	100.0
AVV74285.1\|1072090_1073332_+\|portal	phage portal protein	U5P411	Shigella_phage	1.3e-241	99.3
AVV74286.1\|1073273_1073960_+\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	1.1e-125	100.0
AVV74287.1\|1073974_1075180_+\|capsid	phage major capsid protein	M1FPN2	Enterobacteria_phage	1.6e-223	99.5
AVV74288.1\|1075229_1075430_+	hypothetical protein	S5FNU1	Shigella_phage	3.8e-26	97.0
AVV74289.1\|1075432_1075756_+\|head,tail	phage gp6-like head-tail connector protein	U5P072	Shigella_phage	1.1e-56	99.1
AVV74290.1\|1075752_1076163_+\|head,tail	head-tail adaptor protein	M1FJ87	Enterobacteria_phage	8.0e-71	94.9
AVV74291.1\|1076137_1076644_+	hypothetical protein	M1FPE2	Enterobacteria_phage	2.9e-83	92.3
AVV74292.1\|1076640_1077201_+	hypothetical protein	Q8SBH4	Shigella_phage	5.2e-105	98.9
AVV74293.1\|1077209_1077380_+	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	9.3e-26	100.0
AVV74294.1\|1077363_1078860_+\|tail	phage tail protein	M1FN90	Enterobacteria_phage	4.2e-271	98.4
AVV74295.1\|1078859_1079216_+\|tail	phage tail protein	U5P076	Shigella_phage	5.3e-63	100.0
AVV74296.1\|1079215_1079485_+\|tail	phage tail assembly protein	M1FPE4	Enterobacteria_phage	3.5e-43	100.0
AVV74297.1\|1079451_1079634_+	hypothetical protein	NA	NA	NA	NA
AVV74298.1\|1079626_1081459_+\|tail	phage tail tape measure protein	S5FM63	Shigella_phage	1.6e-299	97.2
AVV74299.1\|1081550_1082081_+	hypothetical protein	NA	NA	NA	NA
AVV74300.1\|1082142_1083471_+	DNA circularization protein	Q8SBG8	Shigella_phage	1.1e-243	97.5
AVV74301.1\|1083467_1084547_+\|plate	baseplate protein	U5P0H6	Shigella_phage	7.7e-206	99.4
AVV74302.1\|1084546_1085095_+\|plate	phage baseplate assembly protein V	U5P081	Shigella_phage	5.2e-94	96.2
AVV74303.1\|1085091_1085520_+\|tail	phage tail protein	U5P0R9	Shigella_phage	4.0e-81	99.3
AVV74304.1\|1085506_1086565_+\|plate	phage baseplate protein	Q8SBG4	Shigella_phage	5.2e-199	98.3
AVV74305.1\|1086638_1087139_+	hypothetical protein	O22003	Shigella_phage	4.3e-95	98.2
AVV77665.1\|1087902_1088505_+\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	1.9e-97	89.5
AVV74306.1\|1088476_1088698_-\|tail	phage tail protein	A0A0F7LDZ0	Escherichia_phage	2.7e-25	76.8
AVV77666.1\|1088921_1089317_-	hypothetical protein	NA	NA	NA	NA
AVV74307.1\|1089440_1089995_+	DNA-invertase	A0A1S6L009	Salmonella_phage	2.2e-87	88.9
AVV74308.1\|1090052_1090826_-	hypothetical protein	A0A289ZIY5	Serratia_phage	5.0e-50	44.7
AVV74309.1\|1094348_1095516_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.7e-171	91.5
1092882:1092940	attR	NA	NA	NA	NA
AVV74310.1\|1095647_1096106_-	Na(+)-translocating NADH-quinone reductase subunit E	NA	NA	NA	NA
AVV74311.1\|1096209_1097094_+	LysR family transcriptional regulator	NA	NA	NA	NA
AVV74312.1\|1097295_1098078_-	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	3.3e-49	44.5
AVV77667.1\|1098074_1098314_-	hypothetical protein	Q9XJH3	Enterobacteria_phage	3.8e-33	85.1
AVV74313.1\|1098285_1098834_-	hypothetical protein	E7C9P4	Salmonella_phage	8.0e-34	98.6
AVV74314.1\|1098830_1099052_-	conjugal transfer protein TraR	A0A0N7C211	Escherichia_phage	6.4e-35	98.6
AVV74315.1\|1099150_1099432_-	hypothetical protein	A0A0P0ZE02	Stx2-converting_phage	1.8e-45	95.7
AVV74316.1\|1099442_1099634_-	hypothetical protein	A0A0P0ZC67	Stx2-converting_phage	7.3e-27	100.0
AVV74317.1\|1099606_1099789_-	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	4.3e-29	100.0
AVV74318.1\|1099785_1100466_-	exonuclease	A0A0P0ZCD4	Stx2-converting_phage	1.6e-132	100.0
AVV74319.1\|1100462_1101248_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
AVV74320.1\|1101253_1101550_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.6e-49	100.0
AVV74321.1\|1101714_1102278_+	replication protein P	C1JJ54	Enterobacteria_phage	4.7e-98	95.1

DBSCAN-SWA_3

1818714 : 1873334

Enterobacteria_phage(49.23%)

tail,head,protease,capsid,holin,terminase,transposase,integrase,lysis,portal

attL 1851737:1851754|attR 1873577:1873594

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVV74939.1\|1818714_1819788_-\|integrase	integrase	Q9G075	Enterobacteria_phage	1.1e-199	99.4
AVV74940.1\|1819765_1819969_-	excisionase	Q77WA4	Escherichia_phage	1.2e-19	75.4
AVV74941.1\|1819913_1821082_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.7e-171	91.5
AVV74942.1\|1821275_1821443_-	hypothetical protein	A0A0K2FJ46	Enterobacteria_phage	4.9e-27	98.2
AVV74943.1\|1821531_1821813_-	hypothetical protein	NA	NA	NA	NA
AVV74944.1\|1821927_1822725_-	DUF550 domain-containing protein	A0A075B8H2	Enterobacteria_phage	5.7e-49	41.1
AVV74945.1\|1822721_1822931_-	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	1.3e-32	91.2
AVV74946.1\|1822932_1823121_-	hypothetical protein	Q286W7	Escherichia_phage	6.3e-23	92.6
AVV74947.1\|1823293_1823983_-	hypothetical protein	K7P6J7	Enterobacteria_phage	1.8e-54	56.2
AVV74948.1\|1823979_1824201_-	conjugal transfer protein TraR	A0A1I9LJM6	Stx_converting_phage	8.4e-35	97.3
AVV74949.1\|1824299_1824581_-	hypothetical protein	A0A0P0ZE02	Stx2-converting_phage	6.1e-46	96.8
AVV74950.1\|1824591_1824783_-	hypothetical protein	A0A0P0ZC67	Stx2-converting_phage	6.2e-26	96.8
AVV74951.1\|1824755_1824938_-	DUF1317 domain-containing protein	A0A1U8QQC1	Enterobacteria_phage	4.8e-28	96.7
AVV74952.1\|1824934_1825615_-	exonuclease	A0A0N6WET1	Escherichia_phage	1.6e-132	100.0
AVV74953.1\|1825611_1826397_-	phage recombination protein Bet	A0A0K2FJF1	Enterobacteria_phage	1.4e-148	100.0
AVV74954.1\|1826402_1826699_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.1e-48	99.0
AVV74955.1\|1826667_1826916_-	host cell division inhibitory peptide Kil	A0A0P0ZC96	Stx2-converting_phage	2.5e-19	98.0
AVV74956.1\|1826884_1827049_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q776Q5	Enterobacteria_phage	1.1e-26	100.0
AVV74957.1\|1827121_1827490_-	DUF2528 domain-containing protein	M1FPD2	Enterobacteria_phage	1.7e-64	98.4
AVV74958.1\|1827672_1827873_-	restriction endonuclease	A5VWA0	Enterobacteria_phage	6.7e-31	93.9
AVV74959.1\|1828086_1828668_+	superinfection exclusion protein B	K7P6T7	Enterobacteria_phage	1.5e-91	92.2
AVV74960.1\|1828684_1828957_-	hypothetical protein	K7PH69	Enterobacterial_phage	3.3e-25	95.6
AVV74961.1\|1829269_1829920_-	LexA family transcriptional repressor	K7PM82	Enterobacteria_phage	4.1e-122	98.6
AVV74962.1\|1830000_1830186_+	hypothetical protein	A5VW97	Enterobacteria_phage	1.6e-26	100.0
AVV74963.1\|1830294_1830573_+	hypothetical protein	K7P7A2	Enterobacteria_phage	1.6e-43	100.0
AVV74964.1\|1830607_1831507_+	Replication protein O	A0A0K2FJ31	Enterobacteria_phage	3.2e-173	99.7
AVV74965.1\|1831503_1832205_+	Replication protein P	K7P6G2	Enterobacteria_phage	1.7e-129	99.6
AVV74966.1\|1832201_1832492_+	protein ren	O48423	Enterobacteria_phage	9.6e-47	100.0
AVV74967.1\|1832562_1832835_+	hypothetical protein	Q9ZWY1	Enterobacteria_phage	3.8e-37	84.3
AVV74968.1\|1832837_1833248_+	recombination protein NinB	A0A0P0ZCW6	Stx2-converting_phage	2.6e-69	97.1
AVV74969.1\|1833244_1833427_+	NinE family protein	Q716C5	Shigella_phage	1.3e-28	100.0
AVV74970.1\|1833423_1833594_+	protein ninF	M1FPE8	Enterobacteria_phage	1.4e-26	100.0
AVV74971.1\|1833586_1834198_+	protein NinG	Q716C3	Shigella_phage	3.3e-97	98.0
AVV74972.1\|1834194_1834860_+	serine/threonine protein phosphatase	A0A088CPU5	Enterobacteria_phage	1.4e-128	97.3
AVV74973.1\|1834856_1835480_+	antitermination protein	K7P6X1	Enterobacteria_phage	4.4e-113	98.1
AVV74974.1\|1835758_1836475_+	hypothetical protein	NA	NA	NA	NA
AVV77692.1\|1837340_1837556_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	4.5e-33	98.6
AVV74975.1\|1837555_1838053_+	lysozyme	H6WZK1	Escherichia_phage	3.8e-91	98.8
AVV74976.1\|1838049_1838487_+\|lysis	lysis protein	A0A0P0ZBQ9	Stx2-converting_phage	2.9e-71	97.9
AVV74977.1\|1838636_1839254_+	hypothetical protein	A0A1R3Y613	Salmonella_virus	6.5e-93	85.9
AVV74978.1\|1839743_1840289_+\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	1.4e-94	98.9
AVV74979.1\|1840263_1842189_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.5
AVV74980.1\|1842185_1842392_+\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
AVV74981.1\|1842388_1843990_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.1e-309	99.2
AVV74982.1\|1843970_1845290_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	2.8e-234	98.9
AVV74983.1\|1845299_1845632_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	7.1e-54	97.3
AVV74984.1\|1845687_1846713_+\|capsid	major capsid protein E	C6ZCY2	Enterobacteria_phage	1.5e-190	98.2
AVV74985.1\|1846754_1847153_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	3.0e-59	94.7
AVV74986.1\|1847164_1847518_+\|tail	phage tail protein	A0A2R9YJJ5	Escherichia_phage	2.0e-62	99.1
AVV74987.1\|1847529_1848063_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	3.6e-63	73.4
AVV74988.1\|1848059_1848455_+\|tail	phage tail protein	A0A0K2FIF4	Enterobacteria_phage	5.0e-70	99.2
AVV77693.1\|1848462_1849203_+\|tail	phage tail protein	A0A2I6TC77	Escherichia_phage	2.9e-127	95.5
AVV74989.1\|1849218_1849641_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.1e-59	83.6
AVV74990.1\|1849622_1850057_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	3.4e-64	99.2
AVV74991.1\|1850049_1852629_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	94.6
1851737:1851754	attL	NA	NA	NA	NA
AVV74992.1\|1852625_1852955_+\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	6.0e-53	92.7
AVV74993.1\|1852954_1853653_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.5e-130	97.4
AVV74994.1\|1853657_1854401_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.6e-144	95.1
AVV74995.1\|1854298_1854940_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	1.2e-94	85.6
AVV74996.1\|1855000_1858498_+	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	97.0
AVV74997.1\|1858567_1859167_+	Ail/Lom family protein	A0A0P0ZCF6	Stx2-converting_phage	7.0e-108	96.5
AVV74998.1\|1860545_1860815_+\|tail	phage tail protein	A0A1I9LJT0	Stx_converting_phage	2.2e-45	100.0
AVV74999.1\|1862206_1862578_-\|integrase	integrase	K7PH54	Enterobacteria_phage	2.4e-58	94.3
AVV75000.1\|1863021_1863582_+	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	6.4e-63	64.4
AVV77694.1\|1863791_1864172_+	hypothetical protein	NA	NA	NA	NA
AVV75001.1\|1864255_1864477_+	hypothetical protein	NA	NA	NA	NA
AVV75002.1\|1864489_1865143_-	secretion protein EspJ	NA	NA	NA	NA
AVV75003.1\|1865619_1866648_+	TMAO reductase system periplasmic protein TorT	NA	NA	NA	NA
AVV75004.1\|1866620_1867313_-	two-component system response regulator TorR	W8CYM9	Bacillus_phage	4.5e-18	28.0
AVV75005.1\|1867442_1868615_+	pentaheme c-type cytochrome TorC	NA	NA	NA	NA
AVV75006.1\|1868614_1871161_+	trimethylamine-N-oxide reductase TorA	A0A077SK27	Escherichia_phage	1.0e-70	30.7
AVV75007.1\|1871157_1871757_+	molecular chaperone TorD	NA	NA	NA	NA
AVV75008.1\|1871986_1873334_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.3e-74	52.4
1873577:1873594	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1983572 : 2037406

Enterobacteria_phage(47.73%)

integrase,holin,lysis,tRNA,tail,portal

attL 1971327:1971342|attR 1987340:1987355

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1971327:1971342	attL	NA	NA	NA	NA
AVV75112.1\|1983572_1984691_-\|integrase	integrase	Q77Z04	Phage_21	7.7e-84	44.2
AVV75113.1\|1984659_1984929_-	excisionase	NA	NA	NA	NA
AVV75114.1\|1984990_1987462_-	exonuclease	K7PLW7	Enterobacteria_phage	8.5e-59	60.3
1987340:1987355	attR	NA	NA	NA	NA
AVV75115.1\|1987554_1987746_-	DUF1482 domain-containing protein	NA	NA	NA	NA
AVV75116.1\|1987742_1987931_-	cell division inhibition protein DicB	NA	NA	NA	NA
AVV75117.1\|1988498_1988717_-	hypothetical protein	NA	NA	NA	NA
AVV75118.1\|1988746_1988917_-	hypothetical protein	NA	NA	NA	NA
AVV75119.1\|1988876_1989032_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	3.0e-07	53.2
AVV75120.1\|1989237_1989645_-	transcriptional regulator	I6PD69	Cronobacter_phage	9.8e-29	49.6
AVV75121.1\|1989721_1989949_+	transcriptional regulator	NA	NA	NA	NA
AVV75122.1\|1989932_1990484_+	hypothetical protein	NA	NA	NA	NA
AVV75123.1\|1991283_1991949_+	replication protein	A0A0U2JGJ0	Escherichia_phage	3.2e-85	98.7
AVV75124.1\|1991917_1992730_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	3.3e-108	83.9
AVV75125.1\|1993589_1994348_+	accessory colonization factor AcfC	NA	NA	NA	NA
AVV75126.1\|1994629_1994842_+	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	1.3e-16	72.9
AVV75127.1\|1995062_1995323_+	hypothetical protein	NA	NA	NA	NA
AVV75128.1\|1995389_1995668_+	hypothetical protein	I6PCV7	Cronobacter_phage	1.3e-11	48.4
AVV75129.1\|1995669_1996728_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	9.8e-89	47.7
AVV75130.1\|1996728_1997109_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	4.1e-37	64.6
AVV75131.1\|1997105_1997927_+	antitermination protein	K7P7B9	Enterobacteria_phage	1.1e-79	59.3
AVV75132.1\|1998566_1998998_+	tellurite resistance protein	H6WZJ6	Escherichia_phage	1.6e-66	96.5
AVV75133.1\|1998888_1999155_+	hypothetical protein	NA	NA	NA	NA
AVV75134.1\|1999312_1999441_+	hypothetical protein	NA	NA	NA	NA
AVV75135.1\|1999489_1999660_+	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	9.7e-23	96.4
AVV77699.1\|1999683_1999836_+	hypothetical protein	H6WZJ9	Escherichia_phage	1.7e-15	90.0
AVV75136.1\|1999975_2000119_-	hypothetical protein	NA	NA	NA	NA
AVV75137.1\|2000117_2000333_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	7.7e-33	98.6
AVV75138.1\|2000332_2000830_+	lysozyme	A5LH83	Enterobacteria_phage	1.3e-91	100.0
AVV75139.1\|2000826_2001294_+\|lysis	lysis protein	A5LH84	Enterobacteria_phage	4.6e-75	99.4
AVV75140.1\|2001315_2001678_+	DNA-binding protein	A5LH85	Enterobacteria_phage	8.9e-66	99.2
AVV75141.1\|2002129_2002669_+	DUF1441 domain-containing protein	A5LH26	Enterobacteria_phage	3.0e-94	99.4
AVV75142.1\|2002769_2004776_+	DNA packaging protein	A5LH27	Enterobacteria_phage	0.0e+00	99.4
AVV75143.1\|2004772_2004985_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
AVV75144.1\|2004984_2006493_+\|portal	phage portal protein	A5LH29	Enterobacteria_phage	2.5e-287	99.2
AVV75145.1\|2008504_2008873_+	DUF2190 domain-containing protein	A0A291AWX2	Escherichia_phage	9.7e-52	100.0
AVV75146.1\|2008865_2009141_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
AVV75147.1\|2009152_2009731_+\|tail	phage tail protein	A0A291AWZ0	Escherichia_phage	9.4e-102	99.5
AVV75148.1\|2009727_2010129_+\|tail	phage tail protein	A5LH34	Enterobacteria_phage	1.9e-72	99.2
AVV75149.1\|2010139_2010883_+\|tail	phage tail protein	A5LH35	Enterobacteria_phage	9.5e-131	98.0
AVV77700.1\|2010943_2011330_+\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	1.6e-65	100.0
AVV75150.1\|2011338_2011668_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
AVV75151.1\|2011639_2014705_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	98.8
AVV75152.1\|2014704_2015034_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.7e-60	100.0
AVV75153.1\|2015043_2015742_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	8.6e-134	99.6
AVV75154.1\|2015746_2016490_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.7e-152	99.2
AVV75155.1\|2016387_2017035_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	5.0e-112	97.2
AVV75156.1\|2017095_2020491_+	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	88.9
AVV75157.1\|2020558_2021158_+	Ail/Lom family protein	Q9EV15	Enterobacteria_phage	2.8e-101	91.0
AVV75158.1\|2021222_2022536_+\|tail	phage tail protein	H6WZM9	Escherichia_phage	2.8e-77	98.2
AVV75159.1\|2022537_2022807_+\|tail	phage tail protein	Q687E5	Enterobacteria_phage	1.7e-42	95.5
AVV77701.1\|2023283_2023706_+	hypothetical protein	B6DZB9	Enterobacteria_phage	3.0e-57	77.0
AVV75160.1\|2024986_2025613_-	DUF1076 domain-containing protein	B6DZZ5	Stx2-converting_phage	5.9e-25	37.8
AVV75161.1\|2025796_2026387_+	bfpT-regulated chaperone	NA	NA	NA	NA
AVV75162.1\|2026846_2027011_+\|tail	phage tail protein	K7PMH7	Enterobacteria_phage	8.5e-16	87.2
AVV75163.1\|2027243_2028107_-	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	6.7e-11	28.7
AVV75164.1\|2028090_2029227_-	Fe3+/spermidine/putrescine ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	5.5e-29	39.8
AVV77702.1\|2029205_2029421_-	hypothetical protein	NA	NA	NA	NA
AVV75165.1\|2029476_2030703_+	peptidase T	NA	NA	NA	NA
AVV75166.1\|2030751_2031873_-	cupin domain-containing protein	NA	NA	NA	NA
AVV75167.1\|2031948_2033409_-	sensor protein PhoQ	NA	NA	NA	NA
AVV75168.1\|2033408_2034080_-	two-component system response regulator PhoP	NA	NA	NA	NA
AVV75169.1\|2034248_2035619_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	3.6e-107	44.6
AVV77703.1\|2035622_2036264_-	lysogenization protein HflD	NA	NA	NA	NA
AVV75170.1\|2036299_2037406_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_5

2405358 : 2445102

Enterobacteria_phage(37.84%)

head,capsid,terminase,transposase,lysis,tail,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVV75488.1\|2405358_2405934_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.5e-103	95.3
AVV75489.1\|2405933_2408894_-	hypothetical protein	A0A0K2FIZ6	Escherichia_phage	2.4e-55	53.7
AVV75490.1\|2408958_2409558_-	Ail/Lom family protein	A0A0P0ZCF6	Stx2-converting_phage	1.1e-108	97.5
AVV75491.1\|2413668_2414412_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.7e-149	97.6
AVV75492.1\|2414417_2415116_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	3.1e-131	97.8
AVV75493.1\|2415440_2418002_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	90.2
AVV75494.1\|2417994_2418429_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
AVV75495.1\|2418410_2418833_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.2e-71	97.9
AVV77723.1\|2418848_2419589_-\|tail	phage tail protein	A0A2I6TC77	Escherichia_phage	2.2e-127	95.9
AVV75496.1\|2419596_2419992_-\|tail	phage tail protein	A0A0K2FIF4	Enterobacteria_phage	1.0e-70	100.0
AVV75497.1\|2419988_2420567_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	7.8e-80	97.9
AVV75498.1\|2420578_2420932_-\|tail	phage tail protein	A0A2R9YJJ5	Escherichia_phage	9.0e-63	100.0
AVV75499.1\|2420943_2421339_-	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	1.2e-55	92.4
AVV75500.1\|2421380_2422406_-\|capsid	major capsid protein E	C6ZCY2	Enterobacteria_phage	5.6e-190	97.9
AVV75501.1\|2422461_2422794_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	3.2e-54	98.2
AVV75502.1\|2424102_2425704_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.0e-310	99.4
AVV75503.1\|2425700_2425907_-\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
AVV75504.1\|2425903_2427829_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.4
AVV75505.1\|2427803_2428349_-\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	4.7e-95	99.4
AVV75506.1\|2428488_2428632_-	DNA-packaging protein	NA	NA	NA	NA
AVV75507.1\|2428737_2428971_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.5e-21	84.1
AVV75508.1\|2429028_2429439_+	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	2.5e-56	79.4
AVV75509.1\|2429590_2429764_-	protein GnsB	NA	NA	NA	NA
AVV75510.1\|2429935_2430208_-	hypothetical protein	NA	NA	NA	NA
AVV75511.1\|2430238_2430427_-	cold-shock protein	NA	NA	NA	NA
AVV75512.1\|2430437_2430650_-	cold-shock protein CspI	A0A1W6JNX5	Morganella_phage	1.2e-22	74.3
AVV75513.1\|2431013_2431511_-	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	2.9e-06	29.5
AVV75514.1\|2431507_2432041_-	lysozyme from lambdoid prophage Qin	K7PLY1	Enterobacteria_phage	6.4e-97	93.2
AVV75515.1\|2432037_2432349_-	DUF1327 domain-containing protein	K7PGU6	Enterobacteria_phage	2.0e-26	64.6
AVV75516.1\|2432353_2432569_-\|lysis	lysis protein S	A5LH82	Enterobacteria_phage	1.1e-31	94.4
AVV75517.1\|2433322_2433538_-	cold-shock protein CspB	A0A1W6JNX5	Morganella_phage	3.4e-25	76.5
AVV75518.1\|2433838_2434051_+	cold-shock protein CspF	NA	NA	NA	NA
AVV75519.1\|2434472_2435225_-	antitermination protein Q	A0A192Y5X6	Salmonella_phage	7.1e-134	92.8
AVV75520.1\|2435238_2436288_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.3e-112	57.3
AVV75521.1\|2436289_2436568_-	hypothetical protein	NA	NA	NA	NA
AVV75522.1\|2436634_2436886_-	hypothetical protein	NA	NA	NA	NA
AVV75523.1\|2437102_2437258_-	protein HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
AVV75524.1\|2437329_2437617_-	mRNA interferase RelE	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	66.0
AVV75525.1\|2437616_2437856_-	antitoxin RelB	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
AVV75526.1\|2437880_2438186_+	hypothetical protein	NA	NA	NA	NA
AVV75527.1\|2438388_2438721_+	protein flxA	NA	NA	NA	NA
AVV75528.1\|2438990_2439113_-	plasmid mobilization protein	NA	NA	NA	NA
AVV75529.1\|2440646_2441735_+\|transposase	IS481 family transposase	A0A0M3LR35	Mannheimia_phage	3.0e-08	23.8
AVV75530.1\|2441777_2441960_+	hypothetical protein	Q7Y2Q9	Escherichia_phage	1.7e-12	74.5
AVV75531.1\|2441934_2442114_-	hypothetical protein	NA	NA	NA	NA
AVV75532.1\|2443266_2443623_-	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	4.8e-40	71.4
AVV75533.1\|2443619_2444042_-	DUF977 domain-containing protein	A0A0U2QQN3	Escherichia_phage	4.4e-64	92.0
AVV75534.1\|2444082_2445102_-	hypothetical protein	U5P0A0	Shigella_phage	2.4e-55	60.2

DBSCAN-SWA_6

2448126 : 2458240

Shigella_phage(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVV75541.1\|2448126_2450568_+	exonuclease	V5UQJ3	Shigella_phage	3.3e-111	46.1
AVV75542.1\|2450640_2450892_+	DNA-binding protein	S4TND0	Salmonella_phage	2.2e-15	50.0
AVV75543.1\|2450911_2452207_+	DUF3596 domain-containing protein	B6DZ48	Enterobacteria_phage	2.2e-154	62.1
AVV75544.1\|2452226_2452337_-	transporter	NA	NA	NA	NA
AVV75545.1\|2452394_2453414_-	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	7.4e-17	25.9
AVV75546.1\|2453425_2454640_-	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	2.8e-47	29.5
AVV75547.1\|2454620_2454809_-	hypothetical protein	NA	NA	NA	NA
AVV75548.1\|2454845_2455172_-	YnfA family protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
AVV75549.1\|2455306_2455648_+	hypothetical protein	NA	NA	NA	NA
AVV75550.1\|2455682_2456243_+	spermidine N1-acetyltransferase	NA	NA	NA	NA
AVV75551.1\|2456245_2456956_-	YnfC family lipoprotein	NA	NA	NA	NA
AVV75552.1\|2457063_2457369_+	DUF1161 domain-containing protein	NA	NA	NA	NA
AVV75553.1\|2457625_2458240_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	6.6e-29	36.3

DBSCAN-SWA_7

2733153 : 2817151

Escherichia_phage(22.22%)

head,plate,capsid,holin,terminase,integrase,tRNA,tail,portal

attL 2773271:2773330|attR 2817213:2817337

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVV75809.1\|2733153_2734926_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
AVV75810.1\|2735235_2735802_+	hydrolase	NA	NA	NA	NA
AVV75811.1\|2735798_2736617_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	6.5e-72	99.2
AVV75812.1\|2736669_2737065_+	hypothetical protein	NA	NA	NA	NA
AVV75813.1\|2737105_2737849_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0
AVV75814.1\|2737845_2738817_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
AVV75815.1\|2738981_2741411_-	molybdopterin guanine dinucleotide-containing S/N-oxide reductase	NA	NA	NA	NA
AVV75816.1\|2741435_2742533_-	cytochrome C	NA	NA	NA	NA
AVV75817.1\|2742920_2743667_-	copper homeostasis protein CutC	NA	NA	NA	NA
AVV75818.1\|2743680_2744247_-	VOC family protein	NA	NA	NA	NA
AVV75819.1\|2744462_2746196_+\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	4.4e-86	33.5
AVV75820.1\|2746248_2746641_-	flagellar protein FlhE	NA	NA	NA	NA
AVV75821.1\|2746640_2748719_-	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
AVV75822.1\|2750067_2750712_-	protein phosphatase CheZ	NA	NA	NA	NA
AVV75823.1\|2750722_2751112_-	two-component system response regulator	A0A2K9L4R0	Tupanvirus	1.7e-06	32.0
AVV75824.1\|2751126_2752176_-	chemotaxis response regulator protein-glutamate methylesterase	Q56AR1	Bacillus_thuringiensis_phage	1.0e-05	32.8
AVV75825.1\|2752178_2753039_-	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
AVV75826.1\|2753329_2754991_-	methyl-accepting chemotaxis protein II	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-10	40.3
AVV75827.1\|2755135_2755639_-	chemotaxis protein CheW	NA	NA	NA	NA
AVV75828.1\|2755659_2757624_-	chemotaxis protein CheA	NA	NA	NA	NA
AVV75829.1\|2757628_2758555_-	motility protein MotB	NA	NA	NA	NA
AVV75830.1\|2758551_2759439_-	flagellar motor stator protein MotA	NA	NA	NA	NA
AVV75831.1\|2759567_2760146_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
AVV75832.1\|2760148_2760499_-	flagellar transcriptional activator FlhD	NA	NA	NA	NA
AVV75833.1\|2761278_2761707_+	universal stress protein UspC	NA	NA	NA	NA
AVV75834.1\|2761713_2763138_-	alpha,alpha-trehalose-phosphate synthase	NA	NA	NA	NA
AVV75835.1\|2763112_2763913_-	trehalose-phosphatase	NA	NA	NA	NA
AVV75836.1\|2764079_2765066_-	L-arabinose ABC transporter permease AraH	NA	NA	NA	NA
AVV75837.1\|2765080_2766595_-	arabinose import ATP-binding protein AraG	A0A2H4PQG7	Staphylococcus_phage	5.7e-13	26.6
AVV75838.1\|2767737_2767977_-	hypothetical protein	NA	NA	NA	NA
AVV75839.1\|2768448_2768952_+	non-heme ferritin	NA	NA	NA	NA
AVV75840.1\|2769029_2769281_-	DUF2766 domain-containing protein	NA	NA	NA	NA
AVV75841.1\|2769395_2769482_-	hypothetical protein	NA	NA	NA	NA
AVV75842.1\|2769575_2769788_-	hypothetical protein	NA	NA	NA	NA
AVV75843.1\|2769745_2770069_+	hypothetical protein	NA	NA	NA	NA
AVV75844.1\|2770240_2770738_+	non-heme ferritin	NA	NA	NA	NA
AVV75845.1\|2770775_2771015_-	DUF2492 domain-containing protein	NA	NA	NA	NA
AVV75846.1\|2771205_2772417_+	tyrosine transporter	NA	NA	NA	NA
AVV75847.1\|2772478_2773144_-	YecA family protein	NA	NA	NA	NA
2773271:2773330	attL	NA	NA	NA	NA
AVV75848.1\|2773615_2774035_-	hypothetical protein	G8C7Q7	Escherichia_phage	1.8e-49	68.8
AVV75849.1\|2774201_2775245_-	late control protein	R9TNM7	Vibrio_phage	2.0e-33	28.5
AVV75850.1\|2775248_2775473_-\|tail	phage tail protein	NA	NA	NA	NA
AVV77741.1\|2775633_2776023_-	hypothetical protein	E5FFG4	Burkholderia_phage	1.0e-14	37.9
AVV75851.1\|2777805_2778087_-\|tail	phage tail assembly protein	NA	NA	NA	NA
AVV75852.1\|2778099_2778612_-\|tail	phage tail protein	NA	NA	NA	NA
AVV75853.1\|2780127_2780517_-	hypothetical protein	A0A2H4EXG4	Aeromonas_phage	9.4e-05	30.8
AVV75854.1\|2780516_2781701_-	hypothetical protein	J9QDX3	Clostridium_phage	1.9e-16	35.2
AVV75855.1\|2781693_2782320_-\|tail	phage tail protein I	A0A193GYD1	Enterobacter_phage	3.5e-25	43.0
AVV75856.1\|2782322_2783243_-\|plate	baseplate assembly protein	D5LGZ3	Escherichia_phage	4.9e-68	48.1
AVV75857.1\|2783239_2783581_-\|plate	baseplate assembly protein	D4HTV2	Vibrio_phage	1.2e-19	50.5
AVV75858.1\|2784465_2785002_-	hypothetical protein	NA	NA	NA	NA
AVV75859.1\|2785709_2786090_-	hypothetical protein	NA	NA	NA	NA
AVV75860.1\|2786086_2786506_-	DNA-packaging protein	NA	NA	NA	NA
AVV75861.1\|2786540_2787575_-\|capsid	major capsid protein E	A0A2I6TCE5	Escherichia_phage	4.3e-105	56.5
AVV75862.1\|2787633_2787963_-\|head	head protein	A0A2R9YJN3	Escherichia_phage	2.0e-08	39.5
AVV75863.1\|2787962_2789270_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.4e-105	53.4
AVV75864.1\|2789269_2790844_-\|portal	phage portal protein	E4WL21	Enterobacteria_phage	8.6e-190	64.0
AVV75865.1\|2790840_2791074_-	hypothetical protein	NA	NA	NA	NA
AVV75866.1\|2791073_2792936_-\|terminase	phage terminase large subunit family protein	A0A1I9KF19	Aeromonas_phage	3.7e-192	53.4
AVV75867.1\|2792922_2793489_-	hypothetical protein	A0A1I9KFT4	Aeromonas_phage	3.5e-32	44.0
AVV77742.1\|2793859_2794105_+	hypothetical protein	NA	NA	NA	NA
AVV75868.1\|2794164_2794359_-	hypothetical protein	NA	NA	NA	NA
AVV75869.1\|2794366_2794846_-	TIGR02594 family protein	A0A222YWL8	Escherichia_phage	1.6e-62	69.4
AVV75870.1\|2794842_2795118_-\|holin	phage holin family protein	A0A0A0YPY6	Escherichia_phage	9.9e-09	42.9
AVV75871.1\|2796281_2796575_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	5.0e-35	71.6
AVV75872.1\|2796571_2797168_-	DUF1367 domain-containing protein	H9C173	Pectobacterium_phage	3.0e-71	64.6
AVV75873.1\|2797245_2797425_-	hypothetical protein	NA	NA	NA	NA
AVV77743.1\|2797576_2798218_-	hypothetical protein	NA	NA	NA	NA
AVV75874.1\|2798336_2798615_-	hypothetical protein	NA	NA	NA	NA
AVV75875.1\|2799182_2799671_+	ImmA/IrrE family metallo-endopeptidase	A0A142KB62	Gordonia_phage	6.4e-27	42.7
AVV75876.1\|2799680_2800286_+	hypothetical protein	NA	NA	NA	NA
AVV75877.1\|2800710_2801586_-	hypothetical protein	NA	NA	NA	NA
AVV75878.1\|2801650_2801866_-	hypothetical protein	NA	NA	NA	NA
AVV75879.1\|2802063_2803143_-	DUF2971 domain-containing protein	NA	NA	NA	NA
AVV75880.1\|2803715_2804639_+	DUF1311 domain-containing protein	NA	NA	NA	NA
AVV77744.1\|2804813_2805602_-	hypothetical protein	A0A0P0ZC44	Stx2-converting_phage	1.4e-39	69.0
AVV75881.1\|2805874_2806096_-	hypothetical protein	NA	NA	NA	NA
AVV75882.1\|2806283_2806508_-	hypothetical protein	NA	NA	NA	NA
AVV75883.1\|2806811_2807048_-	hypothetical protein	NA	NA	NA	NA
AVV75884.1\|2807049_2807460_-	hypothetical protein	NA	NA	NA	NA
AVV75885.1\|2807498_2808890_-	replicative DNA helicase	I6R0N4	Salmonella_phage	1.6e-102	45.6
AVV75886.1\|2808886_2809951_-	replication protein RepO	C8CGZ1	Staphylococcus_phage	5.9e-33	54.7
AVV75887.1\|2809953_2810178_-	hypothetical protein	H9C163	Pectobacterium_phage	1.1e-18	56.8
AVV75888.1\|2810217_2810694_-	hypothetical protein	H9C162	Pectobacterium_phage	3.2e-23	48.6
AVV75889.1\|2810753_2810951_-	hypothetical protein	NA	NA	NA	NA
AVV75890.1\|2811037_2811433_+	transcriptional regulator	I6PD69	Cronobacter_phage	1.5e-42	69.2
AVV75891.1\|2812379_2812700_+	hypothetical protein	NA	NA	NA	NA
AVV75892.1\|2814942_2815512_+	hypothetical protein	H9C156	Pectobacterium_phage	3.6e-37	50.3
AVV75893.1\|2815742_2815967_+	hypothetical protein	H9C154	Pectobacterium_phage	2.1e-09	54.9
AVV75894.1\|2815902_2816166_+	DUF4224 domain-containing protein	H9C153	Pectobacterium_phage	1.2e-06	38.0
AVV75895.1\|2816134_2817151_+\|integrase	integrase	H9C152	Pectobacterium_phage	6.7e-127	63.6
2817213:2817337	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2873205 : 2918523

Enterobacteria_phage(38.64%)

head,integrase,capsid,holin,terminase,transposase,lysis,tail,portal

attL 2870002:2870016|attR 2924574:2924588

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2870002:2870016	attL	NA	NA	NA	NA
AVV75959.1\|2873205_2874186_-	type III secretion system effector NleB	Q8HAB2	Salmonella_phage	2.9e-87	49.5
AVV75960.1\|2874362_2874632_-\|tail	phage tail protein	B6DZB8	Enterobacteria_phage	9.3e-44	97.8
AVV77747.1\|2876007_2876631_-	hypothetical protein	A0A1U8QHD6	Enterobacteria_phage	3.9e-69	61.4
AVV75961.1\|2876699_2880176_-	host specificity protein J	Q6H9T2	Enterobacteria_phage	0.0e+00	96.6
AVV75962.1\|2880309_2880837_+	superoxide dismutase	Q9MC02	Salmonella_phage	2.1e-60	61.0
AVV75963.1\|2880867_2881074_-	hypothetical protein	NA	NA	NA	NA
AVV75964.1\|2881604_2882348_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	5.6e-147	97.2
AVV75965.1\|2882353_2883052_-\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	8.1e-132	98.7
AVV75966.1\|2883051_2883381_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	2.2e-55	95.4
AVV75967.1\|2883377_2885957_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	83.0
AVV75968.1\|2885937_2886351_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	2.7e-42	82.2
AVV75969.1\|2886377_2886809_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.7e-42	68.8
AVV75970.1\|2886822_2887575_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	1.6e-133	98.0
AVV75971.1\|2887582_2887978_-\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	3.9e-59	83.2
AVV75972.1\|2887974_2888508_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.2e-57	65.1
AVV75973.1\|2888523_2888877_-\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	1.5e-41	70.1
AVV75974.1\|2888869_2889292_-	hypothetical protein	NA	NA	NA	NA
AVV75975.1\|2889295_2890324_-\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	3.9e-114	60.7
AVV75976.1\|2890381_2890729_-\|head	head decoration protein	C6ZCY1	Enterobacteria_phage	2.6e-22	58.1
AVV75977.1\|2890765_2891992_-	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	2.5e-75	54.2
AVV75978.1\|2891970_2892270_-\|tail	phage tail protein	E4WL22	Enterobacteria_phage	2.4e-16	54.3
AVV75979.1\|2892259_2893852_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	3.2e-184	60.9
AVV75980.1\|2893848_2894055_-\|tail	phage tail protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
AVV75981.1\|2894038_2895967_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	2.7e-262	66.0
AVV75982.1\|2895938_2896448_-\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
AVV75983.1\|2896850_2897075_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.9e-19	88.7
AVV75984.1\|2897156_2897471_-	PerC family transcriptional regulator	NA	NA	NA	NA
AVV75985.1\|2897713_2897854_-	hypothetical protein	NA	NA	NA	NA
AVV75986.1\|2897936_2898404_-\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	2.2e-72	93.5
AVV75987.1\|2898405_2898519_-	hypothetical protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
AVV75988.1\|2898739_2899273_-	lysozyme	A0A1U9AJ98	Stx1_converting_phage	3.1e-99	94.4
AVV75989.1\|2899305_2899500_-	hypothetical protein	NA	NA	NA	NA
AVV75990.1\|2899468_2899705_+	hypothetical protein	NA	NA	NA	NA
AVV75991.1\|2899653_2899998_+	hypothetical protein	NA	NA	NA	NA
AVV75992.1\|2899960_2900176_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	1.7e-32	97.2
AVV75993.1\|2900174_2900336_+	hypothetical protein	NA	NA	NA	NA
AVV75994.1\|2902876_2903143_-	hypothetical protein	NA	NA	NA	NA
AVV75995.1\|2903633_2904455_-	antitermination protein	K7P7B9	Enterobacteria_phage	4.1e-82	61.2
AVV75996.1\|2904451_2904826_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	6.4e-35	62.7
AVV75997.1\|2904838_2905888_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	7.9e-107	53.4
AVV75998.1\|2905889_2906168_-	hypothetical protein	I6PCV7	Cronobacter_phage	1.6e-11	46.9
AVV75999.1\|2906334_2906490_-	protein HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
AVV76000.1\|2906561_2907650_+\|transposase	IS481 family transposase	A0A0M3LR35	Mannheimia_phage	3.0e-08	23.8
AVV76001.1\|2907836_2907941_-	hypothetical protein	NA	NA	NA	NA
AVV76002.1\|2908056_2908926_-	DUF551 domain-containing protein	A0A1U9AJ59	Stx1_converting_phage	1.0e-120	77.2
AVV76003.1\|2908936_2909200_-	hypothetical protein	A0A2P0P958	Salmonella_phage	8.8e-31	72.4
AVV76004.1\|2909201_2909420_-	sugar acetyltransferase inhibitor	A0A1I9LJM2	Stx_converting_phage	1.1e-26	86.1
AVV76005.1\|2909452_2909665_-	hypothetical protein	A0A2R2Z310	Escherichia_phage	5.8e-33	94.3
AVV76006.1\|2910091_2910517_-	DUF977 domain-containing protein	A0A0U2QQN3	Escherichia_phage	2.4e-62	90.7
AVV76007.1\|2910557_2911520_-	DNA-binding protein	U5P0A0	Shigella_phage	2.1e-69	51.2
AVV76008.1\|2911542_2911968_-	Rha family transcriptional regulator	NA	NA	NA	NA
AVV76009.1\|2911951_2912275_-	transcriptional regulator	A0A0R6PH31	Moraxella_phage	6.2e-10	44.9
AVV76010.1\|2912399_2912876_+	hypothetical protein	A0A2D1GNH0	Pseudomonas_phage	5.7e-12	53.4
AVV77748.1\|2913194_2913350_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	8.8e-07	51.1
AVV76011.1\|2913351_2913480_+	hypothetical protein	NA	NA	NA	NA
AVV76012.1\|2913509_2913728_+	hypothetical protein	NA	NA	NA	NA
AVV76013.1\|2913731_2913947_-	hypothetical protein	NA	NA	NA	NA
AVV76014.1\|2914296_2914485_+	cell division inhibition protein DicB	NA	NA	NA	NA
AVV76015.1\|2914481_2914673_+	DUF1482 domain-containing protein	NA	NA	NA	NA
AVV76016.1\|2917294_2917498_+	DUF4224 domain-containing protein	NA	NA	NA	NA
AVV76017.1\|2917497_2918523_+\|integrase	integrase	A0A192Y7M7	Salmonella_phage	2.0e-102	57.9
2924574:2924588	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3107876 : 3117317

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVV76162.1\|3107876_3109013_+	hypothetical protein	Q9EYF7	Enterobacteria_phage	4.2e-162	97.4
AVV76163.1\|3109009_3111010_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.8
AVV76164.1\|3111133_3111595_+	hypothetical protein	Q9EYF5	Enterobacteria_phage	3.2e-76	99.3
AVV76165.1\|3111635_3112106_-	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
AVV76166.1\|3112152_3112872_-	two-component system response regulator YehT	NA	NA	NA	NA
AVV76167.1\|3112868_3114554_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
AVV76168.1\|3114775_3115507_+	transcriptional regulator	Q9EYF2	Enterobacteria_phage	2.2e-111	99.0
AVV76169.1\|3115566_3115674_+	hypothetical protein	NA	NA	NA	NA
AVV76170.1\|3115654_3116386_-	ABC transporter permease	NA	NA	NA	NA
AVV76171.1\|3116390_3117317_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.8e-22	30.3

DBSCAN-SWA_10

3705155 : 3712295

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVV76650.1\|3705155_3707717_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.6e-31	20.8
AVV76651.1\|3707822_3708479_+	serine/threonine protein phosphatase	A0A077SLQ6	Escherichia_phage	8.6e-51	46.6
AVV76652.1\|3708529_3709297_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.2e-69	57.4
AVV76653.1\|3709492_3710401_+	oxidoreductase	A0A077SLF7	Escherichia_phage	1.5e-117	76.5
AVV76654.1\|3710397_3711660_+	3-oxo-tetronate kinase	A0A077SLJ7	Escherichia_phage	2.2e-135	61.4
AVV76655.1\|3711656_3712295_+	class II aldolase	A0A077SK32	Escherichia_phage	2.8e-83	75.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage