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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP028490 Pseudomonas syringae pv. atrofaciens strain LMG5095 chromosome, complete genome 2 crisprs WYL,cas3,DEDDh,csa3,PD-DExK,DinG,RT 0 0 6 0

Results visualization

1. CP028490
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028490_1 3813410-3813499 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028490_2 4670604-4670752 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 665885 : 673628 9 uncultured_Caudovirales_phage(71.43%) tRNA NA
DBSCAN-SWA_2 1113801 : 1144525 46 Pseudomonas_phage(59.38%) protease,tail,integrase,head,terminase,capsid,portal attL 1116869:1116887|attR 1136234:1136252
DBSCAN-SWA_3 1149769 : 1156359 9 Pseudomonas_phage(71.43%) NA NA
DBSCAN-SWA_4 3539301 : 3550119 13 uncultured_Caudovirales_phage(44.44%) integrase,transposase attL 3534508:3534522|attR 3549545:3549559
DBSCAN-SWA_5 4872262 : 4933294 55 Bacteriophage(18.75%) protease,transposase,tRNA,holin NA
DBSCAN-SWA_6 4999101 : 5083024 88 Pseudomonas_phage(41.67%) plate,tail,integrase,lysis,transposase,tRNA,bacteriocin attL 4994408:4994439|attR 5007643:5007674
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage