CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP021642	Campylobacter concisus strain P2CDO4 chromosome, complete genome	1 crisprs	DEDDh,cas6,cas8b1,cas7,cas5,cas3,cas4,cas2,cas1	0	5	1	0
CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	1 crisprs	csf2gr7,DinG,cas3,cas14j	0	39	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP021642_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP021642_1

1147223-1150030

TypeI-B

Consensus_repeat	Method
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	PILER-CR
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CRISPRCasFinder
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CRT

42 spacers

cas1,cas2,cas4,cas3,cas5,cas7,cas8b1,cas6

The CRISPR arrays of CP021642_1

>merge|CP021642|1|1147223-1150030|PILER-CR,CRISPRCasFinder,CRT
ATTAGAATTTACTCCGTTGGAGTTTGAAACTTTTGTTTAGATCGCTATTTTCGGAGCAGGCATACAAATTAGAATTTACTCCGTTGGAGTTTGAAACGCTTTTTTGGCAAAGGCGCAGAGATCGCCAACCAAAATTAGAATTTACTCCGTTGGAGTTTGAAACATATTGCAAGCGATAAGCCAAATTTTGGCGATACAAAAATTAGAATTTACTCCGTTGGAGTTTGAAACATGTAGAAAATTTGGGTCTTTAATGTAGAAAATTTGAATTAGAATTTACTCCGTTGGAGTTTGAAACTTAGTATATTGACTAACTCTTTCCTGACGATTTGAATTAGAATTTACTCCGTTGGAGTTTGAAACTCATCATAAAACATTGCTTTGCAGCCGTTTTTCCAAATTAGAATTTACTCCGTTGGAGTTTGAAACCTCCCACGAATGGCGGTAACGGAATAGGAGCTGCAAATTAGAATTTACTCCGTTGGAGTTTGAAACGGCGAAGGGGGGCTTTTATGACCCAGCTGGCTCATTAATTAGAATTTACTCCGTTGGAGTTTGAAACTAAATTTAGTCCCTGCCCTACTTTCATCTCCAGATAATTAGAATTTACTCCGTTGGAGTTTGAAACGCTGATCGACTGTTAATAGATTTTCTCTCATTTTATAATTAGAATTTACTCCGTTGGAGTTTGAAACAAGACGTCACTCGCTCACAAAGAGTAAGGATAAGTGAAATTAGAATTTACTCCGTTGGAGTTTGAAACTATAGTAGGCTAAATCGCCGTGATTGAGTGGCTTAAAATTAGAATTTACTCCGTTGGAGTTTGAAACAAATACATTCTAAAAGGTGGTCTTGTAAGAAGTTCAAATTAGAATTTACTCCGTTGGAGTTTGAAACCACTATAAAATAAACAATTGTCGTAAGTTTGAAATCCTAATTAGAATTTACTCCGTTGGAGTTTGAAACCCAGTAATAGTATATTCAATAACACTAGGCTCATTAATTAGAATTTACTCCGTTGGAGTTTGAAACCACCTTTGTACACACTTATATTATATTTAGCCAAGAATTAGAATTTACTCCGTTGGAGTTTGAAACAAAGTAATATTTCGATATTCTAAGGCAGATAAACTACTATTAGAATTTACTCCGTTGGAGTTTGAAACCTAAAATGGCTGAAACTACACATAAACCTAGCTATATATTAGAATTTACTCCGTTGGAGTTTGAAACTAGAAAACTAAATGGCAGGATTGATCTAATATCTCATTAGAATTTACTCCGTTGGAGTTTGAAACTTTTATGAAGCCCTTAACTCTGCGAGCAATCATAAAATTAGAATTTACTCCGTTGGAGTTTGAAACATTCTAATTTTTGGTCTGCTCCAAAAAATTCAAAATTAGAATTTACTCCGTTGGAGTTTGAAACATTTCAGCAGTAGAAACAGCAGTGAGAAAAGCGACAAATTAGAATTTACTCCGTTGGAGTTTGAAACCTAATGATGATATAGCTATCTGTATTTGTGCTGGATAATTAGAATTTACTCCGTTGGAGTTTGAAACGAGAAACTGGCAAGATTGATTCTACTATTTCAACTTATTAGAATTTACTCCGTTGGAGTTTGAAACATGCCCTCTTGATCGACAATGCCAAACGCCATCGCCATTAGAATTTACTCCGTTGGAGTTTGAAACGAGGCAGTCACTTGTGAGATTTTGCCAAACAAAAAGGCATTAGAATTTACTCCGTTGGAGTTTGAAACACCGCTAAGGGGCGAGGACTAAAGCCAGTTAAAAAGATTAGAATTTACTCCGTTGGAGTTTGAAACCATGTTTCCAAATTAGAAACAACTACTGCATTGCATTAGAATTTACTCCGTTGGAGTTTGAAACCAGTTTCCATCTTGTCTTTTGCCAGCATAACCGAATTAGAATTTACTCCGTTGGAGTTTGAAACTATAGTTGTTTCTTATGTTTTGTTTTTTGCTTTAGATTAGAATTTACTCCGTTGGAGTTTGAAACACATTTATGGGGTGGTAGTATATGCCTGCGCTTGTAGATTAGAATTTACTCCGTTGGAGTTTGAAACATTTGACAAGAGCCACCATTTGGCGGACTTCGTCATTAGAATTTACTCCGTTGGAGTTTGAAACGCTTTGAGATCATTATGTTTTCTTTGAAATATCTATTAGAATTTACTCCGTTGGAGTTTGAAACACGGCTTTCAAACTTCAATTAATAATCCTAGTGGTATTAGAATTTACTCCGTTGGAGTTTGAAACACGGCTTTCAAACTTCAATTAATAATCCTAGTGGTATTAGAATTTACTCCGTTGGAGTTTGAAACAAAATGGTTTTAAAAACTGGTTAAGCAATATCATAAAATTAGAATTTACTCCGTTGGAGTTTGAAACTCTGCTAATTCTTGCCTAGTCATTTTTAATACTTTTATTAGAATTTACTCCGTTGGAGTTTGAAACCAAAACTAAGAATACCATCATCTTTTAAGTGCCTTAGATTAGAATTTACTCCGTTGGAGTTTGAAACGTTCGTCTTGTAAAGGCAAAAGTGAAGCAAGCGCATTAGAATTTACTCCGTTGGAGTTTGAAACGAGCTAATAAGCGAGCTAAGAAGAATAAGGGCAAGCATATTAGAATTTACTCCGTTGGAGTTTTAAACTTTCGGCAATATCGCTGAAAGTAGCCGAATTTTCATTAGAATTTACTCCGTTGGAGTTTGAAACAACTGGTGAAGTTGGCCTATAAGCTCTCCACTTCCGATTAGAATTTACTCCGTTGGAGTTTGAAAT

>CP021642|1|1|1147223-1150030|PILER-CR
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TTTTGTTTAGATCGCTATTTTCGGAGCAGGCATACAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GCTTTTTTGGCAAAGGCGCAGAGATCGCCAACCAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATATTGCAAGCGATAAGCCAAATTTTGGCGATACAAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATGTAGAAAATTTGGGTCTTTAATGTAGAAAATTTGA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TTAGTATATTGACTAACTCTTTCCTGACGATTTGA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TCATCATAAAACATTGCTTTGCAGCCGTTTTTCCAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CTCCCACGAATGGCGGTAACGGAATAGGAGCTGCAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GGCGAAGGGGGGCTTTTATGACCCAGCTGGCTCATTA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TAAATTTAGTCCCTGCCCTACTTTCATCTCCAGATA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GCTGATCGACTGTTAATAGATTTTCTCTCATTTTATA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	AAGACGTCACTCGCTCACAAAGAGTAAGGATAAGTGAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TATAGTAGGCTAAATCGCCGTGATTGAGTGGCTTAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	AAATACATTCTAAAAGGTGGTCTTGTAAGAAGTTCAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CACTATAAAATAAACAATTGTCGTAAGTTTGAAATCCTA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CCAGTAATAGTATATTCAATAACACTAGGCTCATTA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CACCTTTGTACACACTTATATTATATTTAGCCAAGA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	AAAGTAATATTTCGATATTCTAAGGCAGATAAACTACT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CTAAAATGGCTGAAACTACACATAAACCTAGCTATAT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TAGAAAACTAAATGGCAGGATTGATCTAATATCTC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TTTTATGAAGCCCTTAACTCTGCGAGCAATCATAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATTCTAATTTTTGGTCTGCTCCAAAAAATTCAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATTTCAGCAGTAGAAACAGCAGTGAGAAAAGCGACAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CTAATGATGATATAGCTATCTGTATTTGTGCTGGATA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GAGAAACTGGCAAGATTGATTCTACTATTTCAACTT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATGCCCTCTTGATCGACAATGCCAAACGCCATCGCC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GAGGCAGTCACTTGTGAGATTTTGCCAAACAAAAAGGC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ACCGCTAAGGGGCGAGGACTAAAGCCAGTTAAAAAG
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CATGTTTCCAAATTAGAAACAACTACTGCATTGC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CAGTTTCCATCTTGTCTTTTGCCAGCATAACCGA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TATAGTTGTTTCTTATGTTTTGTTTTTTGCTTTAG
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ACATTTATGGGGTGGTAGTATATGCCTGCGCTTGTAG
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATTTGACAAGAGCCACCATTTGGCGGACTTCGTC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GCTTTGAGATCATTATGTTTTCTTTGAAATATCT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ACGGCTTTCAAACTTCAATTAATAATCCTAGTGGT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ACGGCTTTCAAACTTCAATTAATAATCCTAGTGGT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	AAAATGGTTTTAAAAACTGGTTAAGCAATATCATAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TCTGCTAATTCTTGCCTAGTCATTTTTAATACTTTT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CAAAACTAAGAATACCATCATCTTTTAAGTGCCTTAG
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GTTCGTCTTGTAAAGGCAAAAGTGAAGCAAGCGC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GAGCTAATAAGCGAGCTAAGAAGAATAAGGGCAAGCAT
ATTAGAATTTACTCCGTTGGAGTTTTAAAC	TTTCGGCAATATCGCTGAAAGTAGCCGAATTTTC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	AACTGGTGAAGTTGGCCTATAAGCTCTCCACTTCCG
ATTAGAATTTACTCCGTTGGAGTTTGAAAT

>CP021642|1|1|1147223-1150030|CRISPRCasFinder
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TTTTGTTTAGATCGCTATTTTCGGAGCAGGCATACAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GCTTTTTTGGCAAAGGCGCAGAGATCGCCAACCAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATATTGCAAGCGATAAGCCAAATTTTGGCGATACAAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATGTAGAAAATTTGGGTCTTTAATGTAGAAAATTTGA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TTAGTATATTGACTAACTCTTTCCTGACGATTTGA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TCATCATAAAACATTGCTTTGCAGCCGTTTTTCCAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CTCCCACGAATGGCGGTAACGGAATAGGAGCTGCAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GGCGAAGGGGGGCTTTTATGACCCAGCTGGCTCATTA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TAAATTTAGTCCCTGCCCTACTTTCATCTCCAGATA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GCTGATCGACTGTTAATAGATTTTCTCTCATTTTATA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	AAGACGTCACTCGCTCACAAAGAGTAAGGATAAGTGAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TATAGTAGGCTAAATCGCCGTGATTGAGTGGCTTAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	AAATACATTCTAAAAGGTGGTCTTGTAAGAAGTTCAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CACTATAAAATAAACAATTGTCGTAAGTTTGAAATCCTA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CCAGTAATAGTATATTCAATAACACTAGGCTCATTA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CACCTTTGTACACACTTATATTATATTTAGCCAAGA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	AAAGTAATATTTCGATATTCTAAGGCAGATAAACTACT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CTAAAATGGCTGAAACTACACATAAACCTAGCTATAT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TAGAAAACTAAATGGCAGGATTGATCTAATATCTC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TTTTATGAAGCCCTTAACTCTGCGAGCAATCATAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATTCTAATTTTTGGTCTGCTCCAAAAAATTCAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATTTCAGCAGTAGAAACAGCAGTGAGAAAAGCGACAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CTAATGATGATATAGCTATCTGTATTTGTGCTGGATA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GAGAAACTGGCAAGATTGATTCTACTATTTCAACTT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATGCCCTCTTGATCGACAATGCCAAACGCCATCGCC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GAGGCAGTCACTTGTGAGATTTTGCCAAACAAAAAGGC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ACCGCTAAGGGGCGAGGACTAAAGCCAGTTAAAAAG
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CATGTTTCCAAATTAGAAACAACTACTGCATTGC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CAGTTTCCATCTTGTCTTTTGCCAGCATAACCGA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TATAGTTGTTTCTTATGTTTTGTTTTTTGCTTTAG
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ACATTTATGGGGTGGTAGTATATGCCTGCGCTTGTAG
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATTTGACAAGAGCCACCATTTGGCGGACTTCGTC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GCTTTGAGATCATTATGTTTTCTTTGAAATATCT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ACGGCTTTCAAACTTCAATTAATAATCCTAGTGGT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ACGGCTTTCAAACTTCAATTAATAATCCTAGTGGT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	AAAATGGTTTTAAAAACTGGTTAAGCAATATCATAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TCTGCTAATTCTTGCCTAGTCATTTTTAATACTTTT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CAAAACTAAGAATACCATCATCTTTTAAGTGCCTTAG
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GTTCGTCTTGTAAAGGCAAAAGTGAAGCAAGCGC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GAGCTAATAAGCGAGCTAAGAAGAATAAGGGCAAGCAT
ATTAGAATTTACTCCGTTGGAGTTTTAAAC	TTTCGGCAATATCGCTGAAAGTAGCCGAATTTTC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	AACTGGTGAAGTTGGCCTATAAGCTCTCCACTTCCG
ATTAGAATTTACTCCGTTGGAGTTTGAAAT

>CP021642|1|1|1147223-1150030|CRT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TTTTGTTTAGATCGCTATTTTCGGAGCAGGCATACAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GCTTTTTTGGCAAAGGCGCAGAGATCGCCAACCAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATATTGCAAGCGATAAGCCAAATTTTGGCGATACAAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATGTAGAAAATTTGGGTCTTTAATGTAGAAAATTTGA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TTAGTATATTGACTAACTCTTTCCTGACGATTTGA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TCATCATAAAACATTGCTTTGCAGCCGTTTTTCCAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CTCCCACGAATGGCGGTAACGGAATAGGAGCTGCAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GGCGAAGGGGGGCTTTTATGACCCAGCTGGCTCATTA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TAAATTTAGTCCCTGCCCTACTTTCATCTCCAGATA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GCTGATCGACTGTTAATAGATTTTCTCTCATTTTATA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	AAGACGTCACTCGCTCACAAAGAGTAAGGATAAGTGAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TATAGTAGGCTAAATCGCCGTGATTGAGTGGCTTAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	AAATACATTCTAAAAGGTGGTCTTGTAAGAAGTTCAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CACTATAAAATAAACAATTGTCGTAAGTTTGAAATCCTA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CCAGTAATAGTATATTCAATAACACTAGGCTCATTA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CACCTTTGTACACACTTATATTATATTTAGCCAAGA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	AAAGTAATATTTCGATATTCTAAGGCAGATAAACTACT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CTAAAATGGCTGAAACTACACATAAACCTAGCTATAT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TAGAAAACTAAATGGCAGGATTGATCTAATATCTC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TTTTATGAAGCCCTTAACTCTGCGAGCAATCATAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATTCTAATTTTTGGTCTGCTCCAAAAAATTCAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATTTCAGCAGTAGAAACAGCAGTGAGAAAAGCGACAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CTAATGATGATATAGCTATCTGTATTTGTGCTGGATA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GAGAAACTGGCAAGATTGATTCTACTATTTCAACTT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATGCCCTCTTGATCGACAATGCCAAACGCCATCGCC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GAGGCAGTCACTTGTGAGATTTTGCCAAACAAAAAGGC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ACCGCTAAGGGGCGAGGACTAAAGCCAGTTAAAAAG
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CATGTTTCCAAATTAGAAACAACTACTGCATTGC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CAGTTTCCATCTTGTCTTTTGCCAGCATAACCGA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TATAGTTGTTTCTTATGTTTTGTTTTTTGCTTTAG
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ACATTTATGGGGTGGTAGTATATGCCTGCGCTTGTAG
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ATTTGACAAGAGCCACCATTTGGCGGACTTCGTC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GCTTTGAGATCATTATGTTTTCTTTGAAATATCT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ACGGCTTTCAAACTTCAATTAATAATCCTAGTGGT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	ACGGCTTTCAAACTTCAATTAATAATCCTAGTGGT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	AAAATGGTTTTAAAAACTGGTTAAGCAATATCATAAA
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	TCTGCTAATTCTTGCCTAGTCATTTTTAATACTTTT
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	CAAAACTAAGAATACCATCATCTTTTAAGTGCCTTAG
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GTTCGTCTTGTAAAGGCAAAAGTGAAGCAAGCGC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	GAGCTAATAAGCGAGCTAAGAAGAATAAGGGCAAGCAT
ATTAGAATTTACTCCGTTGGAGTTTTAAAC	TTTCGGCAATATCGCTGAAAGTAGCCGAATTTTC
ATTAGAATTTACTCCGTTGGAGTTTGAAAC	AACTGGTGAAGTTGGCCTATAAGCTCTCCACTTCCG
ATTAGAATTTACTCCGTTGGAGTTTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP021642.1\|AVX44187.1\|1151324_1152017_-\|tRNA-(Guanine37-N1)--methyltransferase	unknown	unknown	gnl\|CDD\|234581
CP021642.1\|AVX44177.1\|1138805_1139498_+\|hypothetical-protein	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|224499
CP021642.1\|AVX44178.1\|1139666_1141433_+\|CRISPR-associated-protein,-Csh1-family	cas8b1	pfam09484_cas8b1_CAS-I-B	gnl\|CDD\|187861
CP021642.1\|AVX44192.1\|1154481_1155240_-\|RNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
CP021642.1\|AVX44188.1\|1152013_1152544_-\|16S-rRNA-processing-protein-RimM	unknown	unknown	gnl\|CDD\|223877
CP021642.1\|AVX44186.1\|1150959_1151316_-\|LSU-ribosomal-protein-L19p	unknown	unknown	gnl\|CDD\|235418
CP021642.1\|AVX44190.1\|1152778_1153006_-\|SSU-ribosomal-protein-S16p	unknown	unknown	gnl\|CDD\|234588
CP021642.1\|AVX44184.1\|1146069_1147068_+\|CRISPR-associated-protein-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
CP021642.1\|AVX44182.1\|1145272_1145773_+\|CRISPR-associated-RecB-family-exonuclease-Cas4a	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
CP021642.1\|AVX44183.1\|1145781_1146060_+\|CRISPR-associated-protein-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
CP021642.1\|AVX44185.1\|1150300_1150822_-\|Late-competence-protein-ComEA,-DNA-receptor	unknown	unknown	gnl\|CDD\|378965
CP021642.1\|AVX44179.1\|1141443_1142385_+\|CRISPR-associated-protein,-Csd2/Csh2-family	cas7	cd09690_cas7_CAS-I-B	gnl\|CDD\|274217
CP021642.1\|AVX44189.1\|1152536_1152779_-\|KH-domain-RNA-binding-protein-YlqC	unknown	unknown	gnl\|CDD\|224750
CP021642.1\|AVX44176.1\|1136683_1137697_-\|3,4-dihydroxy-2-butanone-4-phosphate-synthase	unknown	unknown	gnl\|CDD\|181775
CP021642.1\|AVX44191.1\|1153077_1154418_-\|Signal-recognition-particle,-subunit-Ffh-SRP54	unknown	unknown	gnl\|CDD\|236780
CP021642.1\|AVX44193.1\|1155236_1156373_-\|Lipid-IVA-3-deoxy-D-manno-octulosonic-acid-transferase	unknown	unknown	gnl\|CDD\|235589
CP021642.1\|AVX44181.1\|1143074_1145273_+\|CRISPR-associated-helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP021642.1\|AVX44180.1\|1142386_1143097_+\|CRISPR-associated-protein,-Cas5h-family	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|187824
CP021642.1\|AVX44194.1\|1156381_1157089_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224495
CP021642.1\|AVX44175.1\|1134340_1136314_-\|Methyl-accepting-chemotaxis-signal-transduction-protein	unknown	unknown	gnl\|CDD\|214599

Protein	Function_ID	Function_description	E-value
CP021642.1\|AVX44187.1\|1151324_1152017_-\|tRNA-(Guanine37-N1)--methyltransferase	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	1.61796e-128
CP021642.1\|AVX44177.1\|1138805_1139498_+\|hypothetical-protein	gnl\|CDD\|224499	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	3.1923e-08
CP021642.1\|AVX44178.1\|1139666_1141433_+\|CRISPR-associated-protein,-Csh1-family	gnl\|CDD\|187861	cd09730, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as TM1802 family.	7.06887e-17
CP021642.1\|AVX44192.1\|1154481_1155240_-\|RNA-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	4.33343e-63
CP021642.1\|AVX44188.1\|1152013_1152544_-\|16S-rRNA-processing-protein-RimM	gnl\|CDD\|223877	COG0806, RimM, RimM protein, required for 16S rRNA processing [Translation, ribosomal structure and biogenesis].	2.54236e-29
CP021642.1\|AVX44186.1\|1150959_1151316_-\|LSU-ribosomal-protein-L19p	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	4.00218e-56
CP021642.1\|AVX44190.1\|1152778_1153006_-\|SSU-ribosomal-protein-S16p	gnl\|CDD\|234588	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed.	1.73661e-35
CP021642.1\|AVX44184.1\|1146069_1147068_+\|CRISPR-associated-protein-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	6.88167e-93
CP021642.1\|AVX44182.1\|1145272_1145773_+\|CRISPR-associated-RecB-family-exonuclease-Cas4a	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	9.71452e-42
CP021642.1\|AVX44183.1\|1145781_1146060_+\|CRISPR-associated-protein-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.06699e-17
CP021642.1\|AVX44185.1\|1150300_1150822_-\|Late-competence-protein-ComEA,-DNA-receptor	gnl\|CDD\|378965	pfam12836, HHH_3, Helix-hairpin-helix motif. The HhH domain is a short DNA-binding domain.	1.38503e-18
CP021642.1\|AVX44179.1\|1141443_1142385_+\|CRISPR-associated-protein,-Csd2/Csh2-family	gnl\|CDD\|274217	TIGR02590, hypothetical_protein_MM_0563, CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csh2 protein of the Hmari subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02589, the Csd3 protein of the Dvulg CRISPR subtype.	2.7948e-64
CP021642.1\|AVX44189.1\|1152536_1152779_-\|KH-domain-RNA-binding-protein-YlqC	gnl\|CDD\|224750	COG1837, COG1837, Predicted RNA-binding protein (contains KH domain) [General function prediction only].	2.43898e-17
CP021642.1\|AVX44176.1\|1136683_1137697_-\|3,4-dihydroxy-2-butanone-4-phosphate-synthase	gnl\|CDD\|181775	PRK09314, PRK09314, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II.	0
CP021642.1\|AVX44191.1\|1153077_1154418_-\|Signal-recognition-particle,-subunit-Ffh-SRP54	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
CP021642.1\|AVX44193.1\|1155236_1156373_-\|Lipid-IVA-3-deoxy-D-manno-octulosonic-acid-transferase	gnl\|CDD\|235589	PRK05749, PRK05749, 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed.	8.13692e-143
CP021642.1\|AVX44181.1\|1143074_1145273_+\|CRISPR-associated-helicase-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.02907e-46
CP021642.1\|AVX44180.1\|1142386_1143097_+\|CRISPR-associated-protein,-Cas5h-family	gnl\|CDD\|187824	cd09693, Cas5_I, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	9.24448e-15
CP021642.1\|AVX44194.1\|1156381_1157089_-\|hypothetical-protein	gnl\|CDD\|224495	COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only].	2.82537e-50
CP021642.1\|AVX44175.1\|1134340_1136314_-\|Methyl-accepting-chemotaxis-signal-transduction-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	6.07834e-39

>CP021642.1|AVX44184.1|1146069_1147068_+|CRISPR-associated-protein-Cas1
MQKNDRTHFILSPGRLYRQDNNIYFEKFDEMGERASCKILPVNAIDEIYMLAKVQIDTYTIAFLADNNILLHIFSPYQSFRGNFYPNTPNSVNKSGFVLLCQLRSFDDPIKRAYIAREITRAHIINDAANCKRHGVKFDVQPHIKALDAATSVPAIMAVEGAFQKLYYEKWNEIIADQRSFKFTVRSKRPPADKINSFISYVNTRIYNICLSEIYKTELDPRIGFLHEPNYRALSLHLDLAEIFKPILGDTLIFNMLNKKEITAKDFQTDAGRIKFSNDAVQKIELKMISRLCETLTVGGRELTWRQVIRREANKLKKCICEDAPYEGFRWE
>CP021642.1|AVX44183.1|1145781_1146060_+|CRISPR-associated-protein-Cas2
MYVILFYDIVGREQKERNNANRIRKAVEKFLPRVQFSVYEGEIRESDFKKLSKTLQKECVSELDSIVIYTFNSLKYSERIVIGVDKNSPVFS
>CP021642.1|AVX44182.1|1145272_1145773_+|CRISPR-associated-RecB-family-exonuclease-Cas4a
MFSKDQITGTLVNYYFTCKREAWLYAHQIHADQEDENVLMGKALADIKERDLQEFAFGNLKFDKLSKQHGHYLITEYKKSLKNELAGKMQLLFYIYLLKTGLNLKEVKGKLISGKKVILVDDTSENFALMEQILGEISALANLEKPPKFTQGKFCQNCAYHDYCTV
>CP021642.1|AVX44181.1|1143074_1145273_+|CRISPR-associated-helicase-Cas3
MKESILFDEFWSHPNKLLENHIKNMISPDDDELGKQVKLYHDIAKLKNNFQIYIRDTSNDKLDKNHSLLSAYFFLLNSKFDEIPTLFGFLAIVSHHGDVVNLMTLAREANKFFKNQKELEQWDEVAGAAKNIKIYSGLSTKKDEFLDRAEKLRQYLVLSQYRHKFTYEDFINFKSLYSNLIYNDKFEAIFSMPKQQSKDIPIDVLESDIQNLPPNKKRDAFRNFVLNNFDKECKLFTLTAPTGYGKTLTALNFALKFNKPRIIYALPFTSIIDQTYDIVAKIYKNSDILVSKAHHKTTIGEENLTQEDRYSKIKFLMESFSGEINVTTLYQLIFALFGNKNKDNVKFNQLKNSVVIIDEAQAIPYNFRKDFILLCEIISQRLGTIFIFMSATMPVIKSENFKEISNLDYFSKQDRYVIKWLDIGGEDELLEKICEAASDKNTLVVVNTIKKAQELFTKLRDKFSCFCLNGYMYDDHKRATIEAVRCAVNKSKVDPLASKILLISTQSIEAGVDLDFDIGFREVSPISSIIQTAGRVNRHFGATRGELYVFPEISKFTNLIYGDLYKVSGTILSDLKQKEVRESEILEISNLYFQKISNQLENLHVKSEIEKLEFENINQKIEEIMNDNYKQTIIIEPKENFIKDFEAKIFEIKNSPNEKFTIKDLFKNHIRKLSKFSINVTLKDMNKLMPNLKQINGLKDMFYLPFGSSYFYSAEYGLKKDTNLDITDEVFD
>CP021642.1|AVX44180.1|1142386_1143097_+|CRISPR-associated-protein,-Cas5h-family
MSIVAFRLFGDYAHFSHPATIYSSLTYPVPPKTTIMGFLGAVIGEEEYFKLSNIQYSVKIDRQILKKSFVFNGIKFALSSNMHIEEGYQNAKEKKQFYRELICSPSYVVFLNLENLGQRYQDKIISNLKEHKTAFTPYLGINFCIADFSWIDIKICEKISQAESFINTFTLMDDFIFEDINENAKLTTARMPCGCENGRIFKDFKDFVMEINGKELIKSKNHGNIYQINDERVYFI
>CP021642.1|AVX44179.1|1141443_1142385_+|CRISPR-associated-protein,-Csd2/Csh2-family
MQKKEILFLWDGENWNPNGDMLKDNAPRRDDETGVAEVTDVRIKRTIRDEIMKKDEASIFIKEYRIEDALLDAKTAIRQSINIKQGKSELQKEILSKFIDIRAFGGVLPISDKDEMKQDKEIKTAGVQFTGPVQFRLSKSLNKVEVEHVKGTGAFASDYDPNDPKKQKDQATFREEEFIKYAIFATYGIIDNYNAAKTGFNEADEAKILKALWHGTKNLTTRSKIGQTPRFMLIITYKDDTFAGDLNNSISLKSEKEDRVIRSINEYTIDFTNLKNKLARYAANIEKIEYMSDYDFETINKENFDSSWKKIEA
>CP021642.1|AVX44178.1|1139666_1141433_+|CRISPR-associated-protein,-Csh1-family
MADIVKILADIGEVYEKEELKLKNGAHKYDKIKVYLCDIKTKRIEPNLNISKDDLIICRFGVGANSGNLFPNSQFLSKEINKDEAKFIRGILKSISNLLSFFEPSIIEKDAILSILSSINEEYFAGIIDEIKGLDELKNEKGKKVATFFSLSYNGKPVSAYFKQIFENHISVKEQKSSYGYDILTNKKGIGGDANLAFCSVNEMPANMQFIKSKLLPLSANSAKKVENGFKAIKDKLSHNFYGMKMAILPTILSSSVNLEEIVKILEETSKNDIKNIEIAEEAIKFSIDYYLETTAKKQENLPVLNTILFYTQSNAAIDLKLAIDDVLPSFISRISNLMSHFNIKAFYEKNSGTEETIYLQNLFESRLGVMSFLLSRNKFDLEIMIERYSDLIYYGSVNKSYAKKLEWSKYFNDFYKERKFENIAKYQNFFNEINVLNKKLVFQKECDLENLTDKKELIKELIKNSEFLNQNDALTSAYLLGMLSAAMINWQLGVNGGVSFSNWLNDCGSISMENLERIWTKCDEMIRKLKAASGKPNANIENIKECLIEILPQVFSKERKMVKTSHTTLAFAMGGSDYRKFIKEKTK
>CP021642.1|AVX44177.1|1138805_1139498_+|hypothetical-protein
MIIINSRLPTQNLKIVKSLSRLIQGYIYSYLPKAEHDGYTHKESGKNFKRSNFDFNLNGLSLEIRFSSFVPEFEKTIAFAVLKDGLKLGNIYLVDTSVSVKEHRILQNEATFQGCVACSVVGLLGYKVHLEPQDSRHLEMMKTNALQRFETLMGYKYKGEFELNLLWQNLQKPLYFYYGNNNMPVKAWPAKWHIKARPELINLILDVGVGSGCMNCGLGFLEAVEEKQVE
>CP021642.1|AVX44176.1|1136683_1137697_-|3,4-dihydroxy-2-butanone-4-phosphate-synthase
MALENVLKAIEDIKNGKMVVMVDDEDRENEGDLVFSAASSDMQKVNFAITHAKGVLCLAMDEANAKRLDLPLMVAKNTSSHETAFTVTIDAKDATTGVSAYERDMTIRLAADASSKPEDFVRPGHIFPLIAKNGGVLVRTGHTEGSVDLCKLAGVAPMASICEIVKEDGTMARRDYLEEFCKKFGLNMISVSDLVEYRLSHESLIRVGEKSDVMIADCAAARYDITDHKGKIHSAYIFGEPKSKTNVKFQKIIADHELLSSPKYEELLKTIKFLSQNGGILIFLDSDNSNTSKDYGIGAQILNHFGVKEIELLSSNKNKEFVSLAGFGLNIVGYKEI
>CP021642.1|AVX44175.1|1134340_1136314_-|Methyl-accepting-chemotaxis-signal-transduction-protein
MRSISNKIALTLIVLLSVCFAVMSAVSYFNAKDEVVKLISQNQDQILSDIKSVTQSFIDDYMEDSQKLANKLAGSIGREDEILARLKSTKENLKSIVIGAYFAAESNGYTYGSNGKTLTPEKDKYEPRGRGWYIAAKSSGKTIFTKPYIDMVAPEHDLCMTFSTPITEGGKLLGATFTDVNIRLLSKKLLKMGKTEFGYVYFMDKDGVILLHDDESLINSSVEATKTLAAKFASKDFDENGLISYKNAKNENVLAKILPINDDGWLAVAAINADTFTSQTMPLLKIQLILAVLFIVILSAFVYFLLKKSLNPIKTIQSKLDDLFKFVTYEAKAPSKLEVRSNDEFGEMSKAINENIDKVVAGIKKDSTMIDELNKVANLMIKGSLGAKIGSTPNNPSLNELKELLNKFFTSISANLKGITNVLSSYTKNDFTAKVEINEELEADLKAMILGVSNMGEVICTMLNSNLNDAKMLEEKATTLASAMKELTQGASTQASSLQESAAAVEQMSSSMNAISQKTADVIRQSDEIKNIITIIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLGEIEANTNVLAQSINEMSESIKEQSEGINMINQSVAQIDHLTKENVVIANRANEVTSDVDNMAKTIVSEVRKNKF
>CP021642.1|AVX44185.1|1150300_1150822_-|Late-competence-protein-ComEA,-DNA-receptor
MKKILISLAAIASLAMAAINLNTATKEELMSLDGIGSAKADAIIEYRKANKFNSIDDLKNVNGIGDKTFDNLKGEISTTGKSEVSEKAKASKKKMDEVKDEMKDKISDKKDKFKKKASKTKEELTSSKEDETSMGEKAKDEKDKVVDKVKEKKEKAASKAKSKKEKLKEKLEK
>CP021642.1|AVX44186.1|1150959_1151316_-|LSU-ribosomal-protein-L19p
MRNKYIEAFENAQIVGKNIPDFRAGDTLRVATRIHEGDKTRIQNFEGICIARRGSGTGETFIIRKIGANSVGVERIFPIFSDSIEEIKVLRKGRVRRAKLFYLRELRGKAAKIRELRK
>CP021642.1|AVX44187.1|1151324_1152017_-|tRNA-(Guanine37-N1)--methyltransferase
MKFTFITLFENLVKPYFCDSILKRAISNKFIEIDFINPRNFTNDKHNKVDDYMIGGGAGLLMFPQPLDESIKLLKEKDKNTHVIFLTPAGKKFSQNDAKRLSKKDHICFVCSRYEGLDERVIELWADEVFCIGDFILTGGELPALCMSDAISRNVPGVLGNDMSLEVESFEDNLLEAPSFTKPDNFKSIFVVSEFLKGNHAKIHNLKNKMAHCKTRYFRPDLYQKLKPHK
>CP021642.1|AVX44188.1|1152013_1152544_-|16S-rRNA-processing-protein-RimM
MNSDIVEVATIGRCVGLKGYLKLHNKSDFPEQFKKGATFFDKNNDQLIIKDYNRSKELVLFENFDDLDLAKTLVNKTIYTTKELTRKNCKLKKDEFFQFDIVGLKVVENGEILGVVEDIQDNFANSLLYIKTDEELIAGGKPKNFYIPYLERFIESVNLDSGEILVKGARDILENS
>CP021642.1|AVX44189.1|1152536_1152779_-|KH-domain-RNA-binding-protein-YlqC
MVENFLYEYAKLIADFPEKVTIERQELGENFVEIIISADKVDTGKLIGKDGKMINAIKTVIIGCKAKDNTSYRVTVKAIE
>CP021642.1|AVX44190.1|1152778_1153006_-|SSU-ribosomal-protein-S16p
MATVVRLTRMGRKKRPFYRIVVTDSRKRRDSGWIESIGYYNPMVEPNVINFNKERLDYWKSVGAKLSDRVAQITK
>CP021642.1|AVX44191.1|1153077_1154418_-|Signal-recognition-particle,-subunit-Ffh-SRP54
MFEQISESFRLAVSKIRFVDDEKALKNALDVLKKALLKADVHHKVTKDLLASIESELKQTGVGQKNFLDAIKSNLTTILTAPGNQGFVYAPVAPTIVLMAGLQGSGKTTTTIKLANYLKLRKKKVLVAACDLQRLAAVEQLKQLCVANDIDLFYIENENNPIKVAKEALEKAKSGLYDVLLVDTAGRLAIDEKLMQEIKDVKNAINPHEIFYVADAMSGQDAVKTATSFNEILGISGVILSKFDSDSKGGVAISIAKQLNIPLRFVGTGEKVADIESFIPDRIVSRIMGEGDLATLVEKTSTIIDEKEAKRLNQKIKKGQFNFNDFLDQMESVKKLGSMKSLMGMIPGLSNIANQIKDIDLDNSKEILHIKAMINSMTQKERENPDLLNNSRKRRLAAGSGLSQVEVNRFLKQFENASKLAKKFSGKGGAKGLANMLSQANLKRPV
>CP021642.1|AVX44192.1|1154481_1155240_-|RNA-pseudouridine-synthase
MSEEKAYKILAKQKNISNNEAKELIDSGLVYAKGQKVMIARALMSENTKFSVEEMPKPSIIFEDENLIAINKPAAITSEKISQIYKFPLLHRLDKDTSGVLLLVKNDEFASLAINEFKKMKVEKIYVAAVRGIMSEEVVVNEPILTIKNKNGAFSKISKDGKEAISEISPLMVVGKKTLVKVAIKTGRTHQIRVHLASLNLPIVGDEKYGKNRANRMFLHAYSIALLNYKFKAPIPREFNSLGFELSNKFEI
>CP021642.1|AVX44193.1|1155236_1156373_-|Lipid-IVA-3-deoxy-D-manno-octulosonic-acid-transferase
MIIIYYFLASILYFFGAIFLLLLSFKKKYHRSIPARFFLFNNPKFKDADVHFHACSFGEVQALKPLMQKFDSKAISVVTNTGFEAASKICANTRFLPFEIFLPFWLKKSKILVIFEAELWLMLVFMAKLKGSRVILINARISDRSYKSYLIFGFFYRYLFKFIDKIYAQSELDKERLKSLGAGEIEVVGNIKAAFLPSVSKIYEKPKVRVIVLASTHTGEEEMILDNLNLKENDLLIIAPRHPERFAEVEKLASDYAKKYDFSFAKFSQKHKFEAKVNLLDTLGELVNIYAISDVVVLGGSFVPNIGGHNPIECAQFSPVIISGEFIFNQKTLFGLVENIYIAKASEIGDIIDSDAKKSKIAVQASADAIIEDIRSTL
>CP021642.1|AVX44194.1|1156381_1157089_-|hypothetical-protein
MNKYLQQLVELSDLDKQIDGFTPRIQEVEKAYKSIEEECETIAVNAERLDEEVNDLKSQKSGTNAHIAEFSAKIKDVAKKSSSAKSEKEIKALGLEEDIAKEQLEAANEEIARLEKLIDNKNAQKDELNAKKTELEGNLEKIKSEVSSELEKIEKERKEVYAKKDKLVAAMNQKILAFYEKIRKWAHNTAVVPVKKQACYGCFMQINDKTFSAVVKGEDIVTCPHCGRILYKQEQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP021642_1	1.4\|1147454\|37\|CP021642\|PILER-CR,CRISPRCasFinder,CRT	1147454-1147490	37	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	110483-110519	3	0.919
CP021642_1	1.10\|1147851\|37\|CP021642\|PILER-CR,CRISPRCasFinder,CRT	1147851-1147887	37	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	106744-106780	3	0.919
CP021642_1	1.29\|1149115\|34\|CP021642\|PILER-CR,CRISPRCasFinder,CRT	1149115-1149148	34	NZ_CP014629	Lactobacillus backii strain TMW 1.1988 plasmid L11988-5, complete sequence	1226-1259	7	0.794
CP021642_1	1.30\|1149179\|35\|CP021642\|PILER-CR,CRISPRCasFinder,CRT	1149179-1149213	35	NZ_CP007767	Campylobacter peloridis LMG 23910 plasmid pPEL1, complete sequence	28445-28479	9	0.743
CP021642_1	1.28\|1149051\|34\|CP021642\|PILER-CR,CRISPRCasFinder,CRT	1149051-1149084	34	KY065449	Streptococcus phage IPP5, complete genome	3486-3519	10	0.706
CP021642_1	1.28\|1149051\|34\|CP021642\|PILER-CR,CRISPRCasFinder,CRT	1149051-1149084	34	FR671405	Streptococcus phage V22	34789-34822	10	0.706
CP021642_1	1.28\|1149051\|34\|CP021642\|PILER-CR,CRISPRCasFinder,CRT	1149051-1149084	34	MH552499	Podoviridae sp. isolate ctcf755, complete genome	39656-39689	10	0.706
CP021642_1	1.30\|1149179\|35\|CP021642\|PILER-CR,CRISPRCasFinder,CRT	1149179-1149213	35	NZ_KX711616	Bacillus subtilis strain 72 plasmid pBS72, complete sequence	95758-95792	10	0.714

1. spacer 1.4|1147454|37|CP021642|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 3, identity: 0.919

atgtagaaaatttgggtctttaatgtagaaaatttga	CRISPR spacer
tggtagaaaatttgggtctttaatgtagaaaatttgt	Protospacer
  **********************************

2. spacer 1.10|1147851|37|CP021642|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 3, identity: 0.919

gctgatcgactgttaatagattttctctcattttata	CRISPR spacer
gctgattgactgttaatagattttctctcattttacg	Protospacer
******.****************************..

3. spacer 1.29|1149115|34|CP021642|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014629 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-5, complete sequence) position: , mismatch: 7, identity: 0.794

cagtttccatcttgtcttttgccagcataaccga--	CRISPR spacer
cagtttccatctcgtcttttacca--tttgccgaag	Protospacer
************.*******.***   * .****

4. spacer 1.30|1149179|35|CP021642|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007767 (Campylobacter peloridis LMG 23910 plasmid pPEL1, complete sequence) position: , mismatch: 9, identity: 0.743

tatagttgtttcttatgttttgttttttgctttag	CRISPR spacer
aataaaatttttttatgttttgttttttggttttt	Protospacer
 ***.   ***.***************** ***

5. spacer 1.28|1149051|34|CP021642|PILER-CR,CRISPRCasFinder,CRT matches to KY065449 (Streptococcus phage IPP5, complete genome) position: , mismatch: 10, identity: 0.706

catgtttccaaattagaaacaactactgcattgc	CRISPR spacer
actgtttccaaaatggaaacaactacttgacaaa	Protospacer
  ********** *.************  *. .

6. spacer 1.28|1149051|34|CP021642|PILER-CR,CRISPRCasFinder,CRT matches to FR671405 (Streptococcus phage V22) position: , mismatch: 10, identity: 0.706

catgtttccaaattagaaacaactactgcattgc	CRISPR spacer
actgtttccaaaatggaaacaactacttgacaaa	Protospacer
  ********** *.************  *. .

7. spacer 1.28|1149051|34|CP021642|PILER-CR,CRISPRCasFinder,CRT matches to MH552499 (Podoviridae sp. isolate ctcf755, complete genome) position: , mismatch: 10, identity: 0.706

catgtttccaaattagaaacaactactgcattgc	CRISPR spacer
tatgtttccaaaatagaaacaattattttaaaaa	Protospacer
.*********** *********.**.* .*  .

8. spacer 1.30|1149179|35|CP021642|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX711616 (Bacillus subtilis strain 72 plasmid pBS72, complete sequence) position: , mismatch: 10, identity: 0.714

tatagttgtttcttatgttttgttttttgctttag	CRISPR spacer
ctgaagtgttccttatgttttcttttttgctgttt	Protospacer
.  *. ****.********** ********* *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

18637 : 27787

Hokovirus(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVX43081.1\|18637_19945_+	Mannose-1-phosphate guanylyltransferase (GDP)	A0A1V0SH58	Hokovirus	1.1e-52	32.4
AVX43082.1\|19948_21091_+	GDP-mannose 4,6-dehydratase	M1HKK4	Acanthocystis_turfacea_Chlorella_virus	4.1e-125	61.3
AVX43083.1\|21094_22141_+	GDP-L-fucose synthetase	D1LW79	Prochlorococcus_phage	1.4e-90	49.9
AVX43084.1\|22133_23822_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.4e-25	25.4
AVX43085.1\|23818_25009_+	UDP-N-acetylglucosamine 4,6-dehydratase	NA	NA	NA	NA
AVX43086.1\|24995_26147_+	aminotransferase DegT	M4R0P6	Ostreococcus_lucimarinus_virus	3.4e-10	22.9
AVX43087.1\|26149_26761_+	4-amino-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) acetyltrasferase	NA	NA	NA	NA
AVX43088.1\|26785_27787_+	N-acetylneuraminate synthase	A0A1B1IVE2	uncultured_Mediterranean_phage	7.5e-30	36.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP021643

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP021643_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP021643_1

35889-37227

TypeIV-A

Consensus_repeat	Method
NGTTCTAAACTTNCANTANATTGTTTAAAAC	CRT
GTTCTAAACTTCCACTACATTGTTTA	CRISPRCasFinder
GTTCTAAACTTCCACTACATTGTTTAAAAC	PILER-CR

20 spacers

csf2gr7,DinG

The CRISPR arrays of CP021643_1

>merge|CP021643|1|35889-37227|CRT,CRISPRCasFinder,PILER-CR
TTTTTTAAAATTTCAAATTTTGTTTAAAACGTGCGAAGCTTGGGCTGGCATATTGTTGTTGCCGTTTTTAAACTTGCATAACATTATTTAAAATGGTCGCTTGATGACGATTTTAAGCGCGCTTGGGGAATTCTAAACTTTCATTACACCATTTAAAACTATAAATTCCACGCCATTTATACCTATCCTCTTTGTTCTAAACTTCCAAAATATTGTTTAAAATCGAAGTGGGGAATGAGCGTGCTCTCTTGGCTATATAGTTCTAAACTTTCAATATATTATTTAAAACATTAGCTACAAAGCTATCGTAAGGGGTCATATCCTGTTCTAAACTTTCAATATATTGTTTAAAACGCTCTTTTTCTATATTTAAAAATACCAAGTTATCGTAGTTCTAAACCTCCACTACATTGTTTAAAACATTTTGTAAAAGATAAATGACGTCGATTATCCTTGCTCTAAACTTTCAATATATTGTTTAAAACTAATCTTCAAATGATCGCAAAGATCAGTCCTTGTGTTCTAAACTTTCATTATATTGTTTAAAACAACAAAAACGTCGCTACTTTTTTCTCGCTCTCGTAGTTTTAAACTTTCAATATATTATTTAAAATTATGCACCAAGTGCATCACTTATTGAGCCACCTCCTGCGTTCTAAACTTCCACTACATTGTTTTAAACGATAATAGAGCTTGCTGTTTTTGTAAGGCAAGAGTTTAGTTTTAAACTTCCATTACATTGTTTAAAACATCTAGTCTTTGGCTTTGATAGCCGCCATATATATGTTCTAAACTTTCAATATATTACTTAAAACACTATTTATCAGGTTAAAAAGCTCGCCTTTCTCCGCGTTCTAAACCTTCACTACATTGTTTAAAATACAAAAAGCACAATATATATTTTCTTGTGCGATGTTCTAAACTTCCATTACATTGTTTAAAACAGCGTAGTCCTTCAGCGTTTGCATCCATTCCATCGGTTCTAAACTTCCACTATATTGTTTAAAACGGTAGCAATGGAGCAAGTGCATTGAAAGCCTTTGAGTGTTCTAAACTTCCACTATATTGTTTAAAACCTTGTAAATTTGTGCCTAAATCTTTTATATCTTTGTTCTAAACTTCCACTACATTGTTTAGAACTAGACCCAAATTTTATTTTTAAGGCGGAGCGAAACAGTTCTAAACTTCCACTACATTGTTTAAAACCGCACGGAGTGGATAATGTAAATCAAAAGTGTATAAGTTCTAAACTTCCACTACATTGTTTAAAACGATGAAAATTCGGCGACTTTTAGCGATATTACCGAAAGTTCTAAACTTCCACTACATTGTTTAAAAC

>CP021643|1|1|35889-37227|CRT
TTTTTTAAAATTTCAAATTTTGTTTAAAAC	GTGCGAAGCTTGGGCTGGCATATTGTTGTTGCCG
TTTTTAAACTTGCATAACATTATTTAAAAT	GGTCGCTTGATGACGATTTTAAGCGCGCTTGGGGA
ATTCTAAACTTTCATTACACCATTTAAAAC	TATAAATTCCACGCCATTTATACCTATCCTCTTT
GTTCTAAACTTCCAAAATATTGTTTAAAAT	CGAAGTGGGGAATGAGCGTGCTCTCTTGGCTATATA
GTTCTAAACTTTCAATATATTATTTAAAAC	ATTAGCTACAAAGCTATCGTAAGGGGTCATATCCT
GTTCTAAACTTTCAATATATTGTTTAAAAC	GCTCTTTTTCTATATTTAAAAATACCAAGTTATCGTA
GTTCTAAACCTCCACTACATTGTTTAAAAC	ATTTTGTAAAAGATAAATGACGTCGATTATCCTT
GCTCTAAACTTTCAATATATTGTTTAAAAC	TAATCTTCAAATGATCGCAAAGATCAGTCCTTGT
GTTCTAAACTTTCATTATATTGTTTAAAAC	AACAAAAACGTCGCTACTTTTTTCTCGCTCTCGTA
GTTTTAAACTTTCAATATATTATTTAAAAT	TATGCACCAAGTGCATCACTTATTGAGCCACCTCCTGC
GTTCTAAACTTCCACTACATTGTTTTAAAC	GATAATAGAGCTTGCTGTTTTTGTAAGGCAAGAGTTTA
GTTTTAAACTTCCATTACATTGTTTAAAAC	ATCTAGTCTTTGGCTTTGATAGCCGCCATATATAT
GTTCTAAACTTTCAATATATTACTTAAAAC	ACTATTTATCAGGTTAAAAAGCTCGCCTTTCTCCGC
GTTCTAAACCTTCACTACATTGTTTAAAAT	ACAAAAAGCACAATATATATTTTCTTGTGCGAT
GTTCTAAACTTCCATTACATTGTTTAAAAC	AGCGTAGTCCTTCAGCGTTTGCATCCATTCCATCG
GTTCTAAACTTCCACTATATTGTTTAAAAC	GGTAGCAATGGAGCAAGTGCATTGAAAGCCTTTGAGT
GTTCTAAACTTCCACTATATTGTTTAAAAC	CTTGTAAATTTGTGCCTAAATCTTTTATATCTTT
GTTCTAAACTTCCACTACATTGTTTAGAAC	TAGACCCAAATTTTATTTTTAAGGCGGAGCGAAACA
GTTCTAAACTTCCACTACATTGTTTAAAAC	CGCACGGAGTGGATAATGTAAATCAAAAGTGTATAA
GTTCTAAACTTCCACTACATTGTTTAAAAC	GATGAAAATTCGGCGACTTTTAGCGATATTACCGAAA
GTTCTAAACTTCCACTACATTGTTTAAAAC

>CP021643|1|1|35953-37223|CRISPRCasFinder
TTTTTAAACTTGCATAACATTATTTA	AAATGGTCGCTTGATGACGATTTTAAGCGCGCTTGGGGA
ATTCTAAACTTTCATTACACCATTTA	AAACTATAAATTCCACGCCATTTATACCTATCCTCTTT
GTTCTAAACTTCCAAAATATTGTTTA	AAATCGAAGTGGGGAATGAGCGTGCTCTCTTGGCTATATA
GTTCTAAACTTTCAATATATTATTTA	AAACATTAGCTACAAAGCTATCGTAAGGGGTCATATCCT
GTTCTAAACTTTCAATATATTGTTTA	AAACGCTCTTTTTCTATATTTAAAAATACCAAGTTATCGTA
GTTCTAAACCTCCACTACATTGTTTA	AAACATTTTGTAAAAGATAAATGACGTCGATTATCCTT
GCTCTAAACTTTCAATATATTGTTTA	AAACTAATCTTCAAATGATCGCAAAGATCAGTCCTTGT
GTTCTAAACTTTCATTATATTGTTTA	AAACAACAAAAACGTCGCTACTTTTTTCTCGCTCTCGTA
GTTTTAAACTTTCAATATATTATTTA	AAATTATGCACCAAGTGCATCACTTATTGAGCCACCTCCTGC
GTTCTAAACTTCCACTACATTGTTTT	AAACGATAATAGAGCTTGCTGTTTTTGTAAGGCAAGAGTTTA
GTTTTAAACTTCCATTACATTGTTTA	AAACATCTAGTCTTTGGCTTTGATAGCCGCCATATATAT
GTTCTAAACTTTCAATATATTACTTA	AAACACTATTTATCAGGTTAAAAAGCTCGCCTTTCTCCGC
GTTCTAAACCTTCACTACATTGTTTA	AAATACAAAAAGCACAATATATATTTTCTTGTGCGAT
GTTCTAAACTTCCATTACATTGTTTA	AAACAGCGTAGTCCTTCAGCGTTTGCATCCATTCCATCG
GTTCTAAACTTCCACTATATTGTTTA	AAACGGTAGCAATGGAGCAAGTGCATTGAAAGCCTTTGAGT
GTTCTAAACTTCCACTATATTGTTTA	AAACCTTGTAAATTTGTGCCTAAATCTTTTATATCTTT
GTTCTAAACTTCCACTACATTGTTTA	GAACTAGACCCAAATTTTATTTTTAAGGCGGAGCGAAACA
GTTCTAAACTTCCACTACATTGTTTA	AAACCGCACGGAGTGGATAATGTAAATCAAAAGTGTATAA
GTTCTAAACTTCCACTACATTGTTTA	AAACGATGAAAATTCGGCGACTTTTAGCGATATTACCGAAA
GTTCTAAACTTCCACTACATTGTTTA

>CP021643|1|1|36803-37227|PILER-CR
GTTCTAAACTTCCATTACATTGTTTAAAAC	AGCGTAGTCCTTCAGCGTTTGCATCCATTCCATCG
GTTCTAAACTTCCACTATATTGTTTAAAAC	GGTAGCAATGGAGCAAGTGCATTGAAAGCCTTTGAGT
GTTCTAAACTTCCACTATATTGTTTAAAAC	CTTGTAAATTTGTGCCTAAATCTTTTATATCTTT
GTTCTAAACTTCCACTACATTGTTTAGAAC	TAGACCCAAATTTTATTTTTAAGGCGGAGCGAAACA
GTTCTAAACTTCCACTACATTGTTTAAAAC	CGCACGGAGTGGATAATGTAAATCAAAAGTGTATAA
GTTCTAAACTTCCACTACATTGTTTAAAAC	GATGAAAATTCGGCGACTTTTAGCGATATTACCGAAA
GTTCTAAACTTCCACTACATTGTTTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP021643.1\|AVX45046.1\|21570_28947_-\|DNA-directed-RNA-polymerase,-omega-subunit-family-protein	unknown	unknown	unknown
CP021643.1\|AVX45063.1\|47180_49580_-\|IcmO-(DotL)-protein	unknown	unknown	gnl\|CDD\|313610
CP021643.1\|AVX45050.1\|33172_33430_-\|hypothetical-protein	unknown	unknown	unknown
CP021643.1\|AVX45060.1\|44516_44645_-\|hypothetical-protein	unknown	unknown	unknown
CP021643.1\|AVX45044.1\|19558_20134_+\|hypothetical-protein	unknown	unknown	unknown
CP021643.1\|AVX45059.1\|43879_44524_-\|hypothetical-protein	unknown	unknown	unknown
CP021643.1\|AVX45049.1\|32431_32875_-\|hypothetical-protein	unknown	unknown	unknown
CP021643.1\|AVX45045.1\|20152_21571_-\|ATPase,-AAA-family	unknown	unknown	gnl\|CDD\|365803
CP021643.1\|AVX45054.1\|37535_38546_-\|hypothetical-protein	csf2gr7	mkCas0183_csf2gr7_CAS-IV-A	gnl\|CDD\|274435
CP021643.1\|AVX45055.1\|38563_39235_-\|hypothetical-protein	unknown	unknown	unknown
CP021643.1\|AVX45051.1\|34009_34999_+\|Integrase-recombinase-protein-XERCD-family	unknown	unknown	gnl\|CDD\|274043
CP021643.1\|AVX45057.1\|40767_42597_+\|DinG-family-ATP-dependent-helicase-YoaA	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|224120
CP021643.1\|AVX45056.1\|39235_40669_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|132160
CP021643.1\|AVX45062.1\|45442_46852_-\|putative-DNA-helicase	unknown	unknown	gnl\|CDD\|237554
CP021643.1\|AVX45048.1\|31255_32431_+\|hypothetical-protein	unknown	unknown	unknown
CP021643.1\|AVX45047.1\|29098_31231_+\|UvrD/REP-helicase	unknown	unknown	gnl\|CDD\|224000
CP021643.1\|AVX45058.1\|42593_43850_+\|hipA-protein	unknown	unknown	gnl\|CDD\|377920
CP021643.1\|AVX45061.1\|44895_45432_-\|hypothetical-protein	unknown	unknown	unknown
CP021643.1\|AVX45053.1\|35709_35865_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271188
CP021643.1\|AVX45052.1\|35353_35617_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374224

Protein	Function_ID	Function_description	E-value
CP021643.1\|AVX45054.1\|37535_38546_-\|hypothetical-protein	gnl\|CDD\|274435	TIGR03115, cas7_csf2, CRISPR type IV/AFERR-associated protein Csf2. Members of this family show up near CRISPR repeats in Acidithiobacillus ferrooxidans ATCC 23270, Azoarcus sp. EbN1, and Rhodoferax ferrireducens DSM 15236. In the latter two species, the CRISPR/cas locus is found on a plasmid. This family is one of several characteristic of a type of CRISPR-associated (cas) gene cluster we designate Aferr after A. ferrooxidans, where it is both chromosomal and the only type of cas gene cluster found. The gene is designated csf2 (CRISPR/cas Subtype as in A. ferrooxidans protein 2), as it lies second closest to the repeats.	5.69826e-15
CP021643.1\|AVX45063.1\|47180_49580_-\|IcmO-(DotL)-protein	gnl\|CDD\|313610	pfam10412, TrwB_AAD_bind, Type IV secretion-system coupling protein DNA-binding domain. The plasmid conjugative coupling protein TrwB forms hexamers from six structurally very similar protomers. This hexamer contains a central channel running from the cytosolic pole (made up by the AADs) to the membrane pole ending at the transmembrane pore shaped by 12 transmembrane helices, rendering an overall mushroom-like structure. The TrwB_AAD (all-alpha domain) domain appears to be the DNA-binding domain of the structure. TrwB, a basic integral inner-membrane nucleoside-triphosphate-binding protein, is the structural prototype for the type IV secretion system coupling proteins, a family of proteins essential for macromolecular transport between cells and export.	4.98887e-07
CP021643.1\|AVX45058.1\|42593_43850_+\|hipA-protein	gnl\|CDD\|377920	pfam07804, HipA_C, HipA-like C-terminal domain. The members of this family are similar to a region close to the C-terminus of the HipA protein expressed by various bacterial species. This protein is known to be involved in high-frequency persistence to the lethal effects of inhibition of either DNA or peptidoglycan synthesis. When expressed alone, it is toxic to bacterial cells, but it is usually tightly associated with HipB, and the HipA-HipB complex may be involved in autoregulation of the hip operon. The hip proteins may be involved in cell division control and may interact with cell division genes or their products.	1.40774e-51
CP021643.1\|AVX45051.1\|34009_34999_+\|Integrase-recombinase-protein-XERCD-family	gnl\|CDD\|274043	TIGR02225, Tyrosine_recombinase_XerD, tyrosine recombinase XerD. The phage integrase family describes a number of recombinases with tyrosine active sites that transiently bind covalently to DNA. Many are associated with mobile DNA elements, including phage, transposons, and phase variation loci. This model represents XerD, one of two closely related chromosomal proteins along with XerC (TIGR02224). XerC and XerD are site-specific recombinases which help resolve chromosome dimers to monomers for cell division after DNA replication. In species with a large chromosome and with homologs of XerD on other replicons, the chomosomal copy was preferred for building this model. This model does not detect all XerD, as some apparent XerD examples score below the trusted and noise cutoff scores. XerC and XerD interact with cell division protein FtsK. [DNA metabolism, DNA replication, recombination, and repair].	2.0924e-26
CP021643.1\|AVX45057.1\|40767_42597_+\|DinG-family-ATP-dependent-helicase-YoaA	gnl\|CDD\|224120	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].	6.09662e-28
CP021643.1\|AVX45056.1\|39235_40669_-\|hypothetical-protein	gnl\|CDD\|132160	TIGR03116, cas5_csf3, CRISPR type IV/AFERR-associated protein Csf3. Members of this family show up near CRISPR repeats in Acidithiobacillus ferrooxidans ATCC 23270, Azoarcus sp. EbN1, and Rhodoferax ferrireducens DSM 15236. In the latter two species, the CRISPR/cas locus is found on a plasmid. This family is one of several characteristic of a type of CRISPR-associated (cas) gene cluster we designate Aferr after A. ferrooxidans, where it is both chromosomal and the only type of cas gene cluster found. The gene is designated csf3 (CRISPR/cas Subtype as in A. ferrooxidans protein 3), as it lies third closest to the repeats.	2.45449e-05
CP021643.1\|AVX45062.1\|45442_46852_-\|putative-DNA-helicase	gnl\|CDD\|237554	PRK13909, PRK13909, RecB-like helicase.	2.88823e-12
CP021643.1\|AVX45053.1\|35709_35865_+\|hypothetical-protein	gnl\|CDD\|271188	cd01188, INT_RitA_C_like, C-terminal catalytic domain of recombinase RitA, a component of the recombinase trio. Recombinases RitA (also known as pAE1), RitB, and RitC are encoded by three adjacent and overlapping genes. Collectively they are known as the Recombinase in Trio (RIT). This RitA family includes various bacterial integrases and integrases from the deletion-prone region of plasmid pAE1 of Alcaligenes eutrophus H1. All three integrases contain a catalytic motif, suggesting that they are all active enzymes. However, their specific roles are not fully understood. All three families belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	0.00615166
CP021643.1\|AVX45052.1\|35353_35617_+\|hypothetical-protein	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	1.21285e-06
CP021643.1\|AVX45047.1\|29098_31231_+\|UvrD/REP-helicase	gnl\|CDD\|224000	COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair].	2.05297e-10
CP021643.1\|AVX45045.1\|20152_21571_-\|ATPase,-AAA-family	gnl\|CDD\|365803	pfam00004, AAA, ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.	6.17948e-20

>CP021643.1|AVX45053.1|35709_35865_+|hypothetical-protein
MLTINACIILVTSYLGVIQKALRHKKIQTTMIYADATGDMVKKEMRRIEGN
>CP021643.1|AVX45052.1|35353_35617_+|hypothetical-protein
MPELNSIAFFYGDGESKEEALAELEEAFKFTIETALADGIKIPEPIDENAKVRINLTIPKGVLNAIDAVTSNRSAWLSELARKALAI
>CP021643.1|AVX45051.1|34009_34999_+|Integrase-recombinase-protein-XERCD-family
MKNNEKLDFADEMANYRDSFISYNKIADKSINTINTYKNCLDGFVEFCYENNDVISFNNLSHKHITDYFIWLDDLYRKKQHKKIANRTKSISSSTKISYLTILKIFFKYITNNNDKLIDLEKILDNYKIAKKKTSKLENFMKEGERDKILDYIENKLVKKPEYRYIKNYRNSLLIKLMLKSGLRISEALNLKFCDFQESDDGEFYDINILAKGGEYQTAYIPKSHIEDDFERLSSIYPPESYIFTNKNGDKPISRQCVYTLLERIYRKCGIVNKRGCHILRHSFAMNMVEKNTNLGVIQKALRHKKIQTTMIYADATGDMVKKEMKRVM
>CP021643.1|AVX45050.1|33172_33430_-|hypothetical-protein
MALKKIELPDELLAKLGATKSPKELGEIVESYVVAGMECANFSKENITLYNITLDLSKRLGKEQEANALIKEAIREINVKLMNDL
>CP021643.1|AVX45049.1|32431_32875_-|hypothetical-protein
MLNYSNDATDVLINDDLTQRLEAIKEKIRTILNIYYKNEGDRIAKLINSLDLRTINTVTHFSITAEQVGLNLLSLNLPYNERLCKVSSKNTTSRKPLSLAPVLEQFWLENKDEIWTLLDMINVSQYEKYALDSERLAYFYIEQMRAL
>CP021643.1|AVX45048.1|31255_32431_+|hypothetical-protein
MASILIKGSDGSFCKYEFESRSELSSIFYQSLLSKYHLAGRVIKCGCNPKKELWMSVVSRGGLFLRTFPKITQTHEDECIFSNTASELYDEETQTYSLSLFKEPTKSEADENSSNAMKRIMAKATTFNSFCIDWISSANAFAFNIANKGNDRYIQNYTYENFRYGLNKSDIKISKIGSIENIKDRSDFFLFKGITFDDLTKYDDSDDDKSIAEIHFQDSKYIIKSTVKRVKIAIKRLKIFNNFIQPPYFVIASVSRNLAVRLFVCPVFFSAEKEQIAFIESENERDMARKLFAANRTFFKSVSDEHNRLSKKKFPYFRSQYRPDFFVFGEGNILVVELSGFDTQEYIDQLKDKEKDYRQIVNFNQNKEITFSYKRVNALTNQVEVAFEPRK
>CP021643.1|AVX45047.1|29098_31231_+|UvrD/REP-helicase
MSAISYTDEQFKIIQEVSQHRNICPNMLVSAGAGTGKSFTIKEALINYFTNCHYGIRDWKFDPATQRIDYDSGMSYRHDALYLVFNRAMADYFKNLIKKVDIEISLVDNLWLSDIVDVKTYHSFLKSGENMQRALAQVGINDLNAVKINYAKNGLTKNDYAVIANKLTNSFFENRILQYNQTDEETLKMLRGYSRSIRGEIEKFFNVYLKSDNVAYNIRGAHKAFVDAGLSYDDTPFKSCGVEYTLAKFCANNSVTPEAVLAHEINKALDTAIKENELEISHTYYYKRIYEYAMKDDDFLKEIFHKYDLIVIDEAQDADAMIFNLIHKYMNIAREDECLKNKYFLAFGDPKQSIYKFNGSFNIFEWANQNNSWFQDLTLTTSFRYGENIAKFGEKIARHIHPNDRLIGNERVKDTIDSKVFDNDTLARVIIENYNKEESHKTDAKSRKNNTAIIFRTNSGCIDCFNELSKSLEKIVASDYPDSDFSPDNVVLDPAIKKDLKGVYQKNIFSVIESDYVKNQIRKAYSILQPDFDGDVLNISMAVKDENVRKLLEKMPEYNYLVRYDEAFLEKYLNIRAKANASVIITNVHQSKGKEYKNVIIGDDFFTRKNEYYCTDEEINIAHTAVTRAKSSILFYERDSNKNFLRYFYCKDESPSSDTKIDQNFFSYKKITEPVEGEDDRISINSDIYDDQDEPFVNNSNRVTFSFPKM
>CP021643.1|AVX45046.1|21570_28947_-|DNA-directed-RNA-polymerase,-omega-subunit-family-protein
MANLHFNDYTFVLSASTKDEVFDDLVSKFPNINFERQDLELNYNQRVDAFFLSNGIKKYEVGNLKFETINEKTSIKTTETTNNAPFALITVTRENMFSVNSPKLKEEVIAILDYLEEQHNIKMDVSFMQHRVGGGYLDVFFDSQSLKKITLNSNIGHQEAKRMGQSVFWGKQLDQEKFNTLIEVLNIQKELLLKTQLLKNIIHLVGLQAIEEQYEFYKEHETTIKATHTINNIETRISRGETAKSIYADIHREIFSTSNISSDTRRISLFETLVNKNKDFIDFPGSLKDFVTFYIENPASSPTLERYIDFIKDFSIEKVNKEIRSKSDLGNFFANVLNLSSQNNQIIVPQGLKLSETELETSLSTTPGITQNISILSNNTSELESRNFGSVELVTKAKTEQEISENFDLFYQLGRSYDAEQKQYYDISDLELSTSEAKTLLSGLNGFIVAKAGFGSKVKLSSIKLGADKELCLTHSKAEKTIDTKVFNSINASLGNIHNRYLLDKLLNISSVSLKSDFLSIEDKSAKIMRLEHELATNQKYYLDVVNALTRNDARIDIIPFHTTSINNGKIKSSPRSIPQGDDASLTDEEKINKYVYLEAYKQKGYDLENLDNNPPVYNAAFGGDGCVKNLGYPLKIDLSSDKKKEIFYNLCVKALDNYSSIAESSDELKTKQFNQITNLLSNDKTYSAMLNLTSIIDSTENVTRIIPFEFYGVLNKDNELLGHINVPASFVYNEMLQEKLVSLENDRLKVIPTDFNKKKKLINNQLAYFNSFRDYLESNNIISRKELNAILSNIFSKGKITPKEIFQLNYNSSEEMKKIYTISKAYLDSILTLPNLESTNKKIYGSKFFKDLDTSKKQEIVNAIDAIYAQNNKKALSNQFLELERIVEDNKFYKRAEEAIVKYKDGLELIKNTTKIVAHSILFNAHHLMLVNRSAQIENAKKELLSVAKEEFSDNYLDKTIGDIAPEKLPKAVINTLLANKDKTIADVASSMTRQANDEIQKAFDGNRIKLLFLNKLKEHQYFSPEAILSAGVKRADLNFAPRSGKTRTALNVLYALGDKNPSNFYIQNGNATDIVGQLVQTFPEILHTVNLKGISDKIDFIDPKFQKEYTSEIGVLNIPNIIKKFLQSEKDDQRKGEYALKDEFPFVALSFISYFKNKSRSEIKDLINTQLPQRPFLEIYLDLLNTERNNRKINEKDVFNHNMAAVYAYYLDYIARNGYIDIADYDKIRTAIGNAYEKILEDRRKIANKDLRINIVSKNNMQTMLPGEELLMNIGEAAKLQSINYLDKYFLSSGSKDIKFNTSVERIYSFSNEETCEKLSKLYKDAKDTIDFIPNSSLKKLSDNNEIIVFPFDRKSKKGDAHILISNKFNEIRDEFIKACKEITHTTLGEAHKNEISVQDLSRVIENSFNDFEGIKSNIIKSSEFDHDKLGNYMGTINDVMANNKEAVGIIIRVGEFLENQIATTKLAVKKNLDENKAIFDRALPLLNVVNYDELISQLHEGLDSLKNSFALRHNKEILLSAYKDFLFPAINSNSNTIGRRKDYQLLLDKYTNNSSNANTQSLRLNYKQNSDFILMPSKFSKYGLSIVSAKPQGLKFNPEKQELFESVQLNKNIITVDFIKNNNQSWETKISLDTKESIKLRASDQAKILSTKSNTFTLQNGKNASINIIDESHKNQGEDTLSNIGLQNAILNSNISVEISATKKENLQSVFSIREIPDLLSSIIYLATTLPEINDLVTKDAFISATDHDRHAKFDPFLVRANRVLPALCGQLEEFMARRNEAIDTSSYEEILNDKDKLKSDGGILSGINRAFETIISALSKKYIEDDIKKFKEVDSIDLADISFVQEYFPNLADKENVLLCSNASILAENFRAKSEADKLKITKSPDTLYDVKIDKDTYIYNNKFAIASLYAKKYFVQNKANKFISTINGLVDALKISLIKVKIEDDEAEDIKKEKRLFNKLVGENLKGFQNLIDYYGFDMSIKDFIVMENKDDKETSGLEMIKEAAINGGLPDVVINANKNKEKLLLKYNIAKEVFLPKILPYINNEKKIEFHSENGFDTQMGFNLAINKNFIKQNLTNLLIKPDFSIVDGTNNKKINLSLQITFDYDMVKEMLPNVGRYLLDDNDGNVLYKEKVSAGNYDTFYSFYTLVNKGAKDLIEEQLQKGYKFPLFTDKIGSSLLSSLLVLETMIKTNSDNKNKSILLFSENQQVISAINKINLEEIRDNHNISFKLITEKNKLQDEINKFHSMDADPDVIISNRKATAEGMQFRSYHPEAYSLYIDGQEVRNNFAAFIQSASRTDSPEARDIFAKHYGKNEKFVQRLNVSFKKYDLVLEKRDGFFKQTDIIDKMQNIFEDGKLDNDAMQQISNLAYSYNKNTVAVIIPKEASRIPYLLKAYSDSYLSSPKMDEDYVKMSLAAVYKLETKSLSENIINNKFGIKQDKNEENKNTIGAKI
>CP021643.1|AVX45045.1|20152_21571_-|ATPase,-AAA-family
MLYLKVDDEYYYSEEGKKELAAKYNLSEENLVFARSKEAILNAFADGSIARIVFIAPYLPESLSSEFKGIFDVIRVDNKYGLLTKKQKEENIDPMTILREKLGSNIYAPVVTFDDYIIDKTSGSFITMMSNLKAIETRQECGVISKGFFLTGVPGTGKTFFAKCIAGELKRYLIELNLSFFINADDTFGLLNKFFSFFKFTEGKFVLLIDEIEKMFNDSPKSKQVLGYLLTTLNEFADKNSKNKADVLFIATANNVTDLVKKNPELFRKGRFDQSIYLTAPKAEKAISTFEYYIKKSQEKFANVSIPMLFLTAKLNQNNEKVIFYDDNTRYSQIVTLIQSNDAVMNIINNYTLVSDKRSEQKNELYEILLKKQDAVNLIDEIKTTYKFAPDAIQLVEDGFSIYRDRMETNRSEFPYVPAEIESIVTELFSDYYFSERDTDIIKFFNANTPLQISMSSGIKEMNGATMEFTKM
>CP021643.1|AVX45044.1|19558_20134_+|hypothetical-protein
MPARFFNSSIIKFSLGVILFLLLLIFFTNAFNSSKKPSIAKFLLLNSFFFFAFAKSLLQALNRGKNIASTLADGDRSFLKAFSLYAIWYIFESGTSFLMILTGIVCSGGLSSLLNALFNALRAASLLLPLINSSSLSPFLAKINGTTMPFASMSLTRERKSSLFSRSPSIDLSSRLSLISYSFGSMLLISS
>CP021643.1|AVX45054.1|37535_38546_-|hypothetical-protein
MLKDYKIKLVIKTVSPIAIIENNDTEPGGNIVTRIKKTATVNQNSDDGKIEYIPYLPANGIRGLLRRLATKKLVDKVKENENIEELKDTDIHAMLSGSGVSKSGLKFKEIEEIREKNPILSLFGTGILIAGKLKVADAIPLDKENAKNLVKRQTFVKVDDILMGTKFSQLYTKKQIEDWEKSVEENSEARKKDRDAKKLAKEMDKTFDEEAKTKKSSIQHFAQREHIVSGATFNGGFFLEKVSKLELGMFLHALEGFIENGRLGSSQNIGFGVVDIHIEDASESASLTMDRLSDSDYIFNAKIDVSLESEFDEAYKAYAEFLKRATKDNIELISKF
>CP021643.1|AVX45055.1|38563_39235_-|hypothetical-protein
MRIVLTFTDDVSEIKPREVRNFCGSITEQKFNSIIMYHGNDAPPLIYKKPLKYAIEILFYENNFFAFQHLMERLEGHKNNFFGRKIKKIIPKEDGYMPPFYLGSQTIEYSTRTPIIITANKTEYNMKYYFEKNDKIQDYISYRIKRNLAYQLECYTKFKQDFENLVLNFKDFRVITERYKENINYIGLWANFTSNYQFPEMIGYKNGLGYGQLLQNTKIDIKK
>CP021643.1|AVX45056.1|39235_40669_-|hypothetical-protein
MENLKISFFLNSPLLIGRFSTIDSILVNLYVKRHFGKNIEIEKLYDFDFIEKYKDGYCGSIWFVEENDQVSLENRCIVKKPEYEYLNENRANKIEYSMGSGEFKAYNIWNELLKTPKIYFYVRGKKEIIEDLLQDLKFIGKKTAIGYGQVSSFLVETIPEDKSVFLAKNTPARPISVKNYPSLENARIIYYNSKVPYWANWSKEACYMPNSSLIETIYPGKERPSIDEKYLSKYHSAINFVYDVLHEDKNNWQEIDLKEKATAKDLIVDGQDHLCAFSGEQSKEGILCKSIEKTLGSTFTDYAFLNNSKFVSKQTFWTLQCGVNSRVGKKSLGFHVVDKNGITYVMGKNKTKSIEQAIKDASLPFNLALKTTPNNQHVVFKSNLTLSKDLIACQYGSETYYFGYEEAKECLKRVNEIIKDYPITKSHLIPNPQIDAPFISLKKDARNKDTILLISDFYKQYSKDVRVGAYILTIGEK
>CP021643.1|AVX45057.1|40767_42597_+|DinG-family-ATP-dependent-helicase-YoaA
MELRSEQRKFVDYAAKRVKENKYCVCEMPTAFGKTFSALMLAKKLIDEKIAQRVVIATSDNSLAKSIFLEAKNVDNLPDYVLGIGKNNYLDIKKLTFFMDTEISSEVLPLDKEVVDGAIKKLKEDFSYVLIEDFLNELDIVDADKREYIANNLALEKSNSESFKEYTIQITNYSFLFSKFMFDEKYAEVDGTVYIFDEIQELPNMAEMTLSSAFSLYSYYLQLKTIAKTINDDASAPKTLIKLLNEEVERVKSINEIMSDEKMAGKTLTANDIAIQRATNVLSKLFDQEKSKALRAKLKSYYKKTPFFQLGVFLNKFDDVKSTLSSKDIYISFSQERGFISFHTYSKDIKLKLADKFWSKIDRFVGITATALLTQDVHDLEIYKRMGINFSDIKLGDTVIKERKSKVCVIKSFEGILRPEQATYSITSNDFIEDEQKRFEYFADEILRGYDGKNTMVLVGGFDEVRLLAQKLESVKDRLVLAEQGRSVQNIIEGFKKSGGILIATRNYATGINLKGKTLERLFITKLPYPVYQTKKWILLKEKNPSFFWFEYNNEMVMTFRQAIGRLIRSPEDTGKIFLLDGKFNALSEGLKNRLIYFLEKIALKGAQL
>CP021643.1|AVX45058.1|42593_43850_+|hipA-protein
MSDTLKIYSNDDLVGFLKIYAVGRNETYYFEYDKEWLKNGFEIDPNLPLQSSQFVSKNLWGAFCDISPDRWGRLIQKRKAGSELTESEYMLGVSDYFRIGSLRIEKESEFVSATNDIPKLTHISELCISSQRIERGESLESDIKNLLAPSGSLGGARPKASVLKGNELYIVKFPSIKDEYRQISRSEKTMLDVASIAKINVCQSELFETAKGTALLVKRFDRNGDKRIPYKSAMTLLGVRDGDENNDKSYCDLANVLDSKNKKELFRRMVFNGLFGNTDDHLRNHGVLYDEKTKSWNLSPAFDITPTPIIYSKQNHALNFVGFKSLPSVQLFYDIKSKFDINDSEFKEIIADMLMARDKFEEIAKRNKINSDNLKMLRNNYCHEDFGRGGEFIAQINQNMAEEYISLDDEANSYKFKL
>CP021643.1|AVX45059.1|43879_44524_-|hypothetical-protein
MVDFSKQYTKIPLSHIPDQWFIALGKYIDFEKVLAIHPLSDFTLRQIPGISWETIARAQGISPLLFEQLTNFSYVKLCGQRPELNGFGVSPHTIEMRKYEIKDYNWKLYASRAKLDREHFVDHFIAFIKNKIIFNDVEAQALLEALSQNPFLPSSKQEALQVYQHVSIDAEPKQDTIEQQTKPQSSNSTKNVSFFDDEHSPSNENNDGESFFAN
>CP021643.1|AVX45060.1|44516_44645_-|hypothetical-protein
MKATGKRPQEVRACMVANNYDEKKLPRDIVGISTSVKTYIYG
>CP021643.1|AVX45061.1|44895_45432_-|hypothetical-protein
MSASMYENSSVVVQSKNIDKADFDLFLNSIFALRENDLNITELIKNYGVSRINVFSWLEPKRPDVDSLWRYAVMKFLLRYDEEKQTALYKTLSDMQILKKSDANIDDKILSLILKVPIGNLERMRDNNSGWQKKFYNIVKRQHPKVLYYQFYYIRQFILKNTQYIPLGVGYGDIGVKG
>CP021643.1|AVX45062.1|45442_46852_-|putative-DNA-helicase
MKFTQEQLDIFAVCKNLKDDQKVSIIAPAGSGKTSTLVELAKQLPDKTILYLAYNQSIKREAQGKFPNNVTVLTTHGLALRSQSIKIEDISTTDLSVVDVQTMFGIEPLEAFNAIKIFNDFCNSNYKKFNEEVVKKNVAVHAASLIYEKMRRREIPITHSFYLKEFQFFDKSKINFDLVFLDEAQDSNDVVLNIFLQLKGSKVFIGDPNQAIYGFRGSANAFNKISADYSMKLTSCFRCVPDVVNKANKVLERYKQDPVKMVSKVMPRDDIAALNYEHIKKSSIKNAIITRTNSKIVEILSSGLDKDTSYILIKKPQDIFKEAINFVRFLNNEKDKIEPEFSYLKEFNSQAALKQHLEDCGDNNLLSTFNLAKRYGKRIFSIYRKASDDYKNRNKIAHHGTYLMTAHTAKGLEFDIVTLEKDFPSLSDLIYKKKISFSELQEEVNLYYVAITRAKYLLIDKTKNEEEFN
>CP021643.1|AVX45063.1|47180_49580_-|IcmO-(DotL)-protein
MAAILLETNKIHRSVRYFGLEESRFRFKRYTKTVRSLFWLSLVSFMFSPYMAVFFLCLFVSKTAGELFGVFFKNEAYMRQYNAILQPQTAKKVVSVIGYRIYNEELDGHLSIIKSGDKTSLAAKQKTMEHPHNKLRHIGIDMDLAKTHMVLVGKTGAGKTEALRSMMDDIMKIGGGIVFNDGKSDVKMLDEILAQAKLNYRETSVRVLNFLKAEKSAESNTFNFFNNQHPVKLIEFLSNLAFKDSSEGNTAYFQNRGKALLLPVASALYIRDKLLGEGIDSEKLSSNTSVLNVTLIFIAFYCMCRDLDEIIAENKNVEPLIGDNSIVVAKTSFFDNIERLIETVIQEPTRRIDIEKELGIEYSFIKDTYTNVYKIIRSYLDKVWNRFIPILDVVALVVYSQGKSQSDGKKRFYSKDVSPETIYSMQDIKIFYNLAKEAFTNTPGQNQSVMPISQEAETLKNNLTNIVNDFSRGTLTISYATTILSEAFTTKGASLENPPADNMMQHSYAQQQWEQLFNVFAAFKHILAQSKSEINPVDVIADNQILYVLLPPLELSRSQVEILGKIIIATIKAFAGSALGGEYIGIHQTIKNIAKDKFTPKPFTLINLDEYGAYPVADLDTILAQVRSLNMSVALGIQDFVSLKASGTDETAQKRALANTSKIIFKVADKDVIEWLEAMINEEEVESSEYKRDAAGELVLDVQTRLENKKIIPIKKTQDANYGLCLMLLGAENDRAVWCQTFFRGGKTENVRLIHTNAIAGISADVISNMKKGYEDFKDEIIQDNIVGKINMELEELAS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP021643_1	1.1\|35919\|34\|CP021643\|CRT	35919-35952	34	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	35919-35952	0	1.0
CP021643_1	1.2\|35983\|35\|CP021643\|CRT	35983-36017	35	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	35983-36017	0	1.0
CP021643_1	1.3\|36048\|34\|CP021643\|CRT	36048-36081	34	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36048-36081	0	1.0
CP021643_1	1.4\|36112\|36\|CP021643\|CRT	36112-36147	36	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36112-36147	0	1.0
CP021643_1	1.5\|36178\|35\|CP021643\|CRT	36178-36212	35	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36178-36212	0	1.0
CP021643_1	1.6\|36243\|37\|CP021643\|CRT	36243-36279	37	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36243-36279	0	1.0
CP021643_1	1.7\|36310\|34\|CP021643\|CRT	36310-36343	34	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36310-36343	0	1.0
CP021643_1	1.8\|36374\|34\|CP021643\|CRT	36374-36407	34	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36374-36407	0	1.0
CP021643_1	1.9\|36438\|35\|CP021643\|CRT	36438-36472	35	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36438-36472	0	1.0
CP021643_1	1.10\|36503\|38\|CP021643\|CRT	36503-36540	38	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36503-36540	0	1.0
CP021643_1	1.11\|36571\|38\|CP021643\|CRT	36571-36608	38	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36571-36608	0	1.0
CP021643_1	1.12\|36639\|35\|CP021643\|CRT	36639-36673	35	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36639-36673	0	1.0
CP021643_1	1.13\|36704\|36\|CP021643\|CRT	36704-36739	36	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36704-36739	0	1.0
CP021643_1	1.14\|36770\|33\|CP021643\|CRT	36770-36802	33	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36770-36802	0	1.0
CP021643_1	1.15\|36833\|35\|CP021643\|CRT,PILER-CR	36833-36867	35	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36833-36867	0	1.0
CP021643_1	1.16\|36898\|37\|CP021643\|CRT,PILER-CR	36898-36934	37	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36898-36934	0	1.0
CP021643_1	1.17\|36965\|34\|CP021643\|CRT,PILER-CR	36965-36998	34	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36965-36998	0	1.0
CP021643_1	1.18\|37029\|36\|CP021643\|CRT,PILER-CR	37029-37064	36	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	37029-37064	0	1.0
CP021643_1	1.19\|37095\|36\|CP021643\|CRT,PILER-CR	37095-37130	36	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	37095-37130	0	1.0
CP021643_1	1.20\|37161\|37\|CP021643\|CRT,PILER-CR	37161-37197	37	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	37161-37197	0	1.0
CP021643_1	1.21\|35979\|39\|CP021643\|CRISPRCasFinder	35979-36017	39	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	35979-36017	0	1.0
CP021643_1	1.22\|36044\|38\|CP021643\|CRISPRCasFinder	36044-36081	38	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36044-36081	0	1.0
CP021643_1	1.23\|36108\|40\|CP021643\|CRISPRCasFinder	36108-36147	40	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36108-36147	0	1.0
CP021643_1	1.24\|36174\|39\|CP021643\|CRISPRCasFinder	36174-36212	39	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36174-36212	0	1.0
CP021643_1	1.25\|36239\|41\|CP021643\|CRISPRCasFinder	36239-36279	41	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36239-36279	0	1.0
CP021643_1	1.26\|36306\|38\|CP021643\|CRISPRCasFinder	36306-36343	38	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36306-36343	0	1.0
CP021643_1	1.27\|36370\|38\|CP021643\|CRISPRCasFinder	36370-36407	38	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36370-36407	0	1.0
CP021643_1	1.28\|36434\|39\|CP021643\|CRISPRCasFinder	36434-36472	39	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36434-36472	0	1.0
CP021643_1	1.29\|36499\|42\|CP021643\|CRISPRCasFinder	36499-36540	42	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36499-36540	0	1.0
CP021643_1	1.30\|36567\|42\|CP021643\|CRISPRCasFinder	36567-36608	42	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36567-36608	0	1.0
CP021643_1	1.31\|36635\|39\|CP021643\|CRISPRCasFinder	36635-36673	39	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36635-36673	0	1.0
CP021643_1	1.32\|36700\|40\|CP021643\|CRISPRCasFinder	36700-36739	40	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36700-36739	0	1.0
CP021643_1	1.33\|36766\|37\|CP021643\|CRISPRCasFinder	36766-36802	37	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36766-36802	0	1.0
CP021643_1	1.34\|36829\|39\|CP021643\|CRISPRCasFinder	36829-36867	39	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36829-36867	0	1.0
CP021643_1	1.35\|36894\|41\|CP021643\|CRISPRCasFinder	36894-36934	41	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36894-36934	0	1.0
CP021643_1	1.36\|36961\|38\|CP021643\|CRISPRCasFinder	36961-36998	38	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	36961-36998	0	1.0
CP021643_1	1.37\|37025\|40\|CP021643\|CRISPRCasFinder	37025-37064	40	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	37025-37064	0	1.0
CP021643_1	1.38\|37091\|40\|CP021643\|CRISPRCasFinder	37091-37130	40	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	37091-37130	0	1.0
CP021643_1	1.39\|37157\|41\|CP021643\|CRISPRCasFinder	37157-37197	41	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	37157-37197	0	1.0
CP021643_1	1.15\|36833\|35\|CP021643\|CRT,PILER-CR	36833-36867	35	NZ_CP032181	Citrobacter freundii strain AR_0116 plasmid unnamed3, complete sequence	39204-39238	9	0.743
CP021643_1	1.17\|36965\|34\|CP021643\|CRT,PILER-CR	36965-36998	34	NC_012732	Rickettsia peacockii str. Rustic plasmid pRPR, complete sequence	4314-4347	9	0.735

1. spacer 1.1|35919|34|CP021643|CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgaagcttgggctggcatattgttgttgccg	CRISPR spacer
gtgcgaagcttgggctggcatattgttgttgccg	Protospacer
**********************************

2. spacer 1.2|35983|35|CP021643|CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

ggtcgcttgatgacgattttaagcgcgcttgggga	CRISPR spacer
ggtcgcttgatgacgattttaagcgcgcttgggga	Protospacer
***********************************

3. spacer 1.3|36048|34|CP021643|CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

tataaattccacgccatttatacctatcctcttt	CRISPR spacer
tataaattccacgccatttatacctatcctcttt	Protospacer
**********************************

4. spacer 1.4|36112|36|CP021643|CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

cgaagtggggaatgagcgtgctctcttggctatata	CRISPR spacer
cgaagtggggaatgagcgtgctctcttggctatata	Protospacer
************************************

5. spacer 1.5|36178|35|CP021643|CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

attagctacaaagctatcgtaaggggtcatatcct	CRISPR spacer
attagctacaaagctatcgtaaggggtcatatcct	Protospacer
***********************************

6. spacer 1.6|36243|37|CP021643|CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

gctctttttctatatttaaaaataccaagttatcgta	CRISPR spacer
gctctttttctatatttaaaaataccaagttatcgta	Protospacer
*************************************

7. spacer 1.7|36310|34|CP021643|CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

attttgtaaaagataaatgacgtcgattatcctt	CRISPR spacer
attttgtaaaagataaatgacgtcgattatcctt	Protospacer
**********************************

8. spacer 1.8|36374|34|CP021643|CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

taatcttcaaatgatcgcaaagatcagtccttgt	CRISPR spacer
taatcttcaaatgatcgcaaagatcagtccttgt	Protospacer
**********************************

9. spacer 1.9|36438|35|CP021643|CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aacaaaaacgtcgctacttttttctcgctctcgta	CRISPR spacer
aacaaaaacgtcgctacttttttctcgctctcgta	Protospacer
***********************************

10. spacer 1.10|36503|38|CP021643|CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

tatgcaccaagtgcatcacttattgagccacctcctgc	CRISPR spacer
tatgcaccaagtgcatcacttattgagccacctcctgc	Protospacer
**************************************

11. spacer 1.11|36571|38|CP021643|CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

gataatagagcttgctgtttttgtaaggcaagagttta	CRISPR spacer
gataatagagcttgctgtttttgtaaggcaagagttta	Protospacer
**************************************

12. spacer 1.12|36639|35|CP021643|CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

atctagtctttggctttgatagccgccatatatat	CRISPR spacer
atctagtctttggctttgatagccgccatatatat	Protospacer
***********************************

13. spacer 1.13|36704|36|CP021643|CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

actatttatcaggttaaaaagctcgcctttctccgc	CRISPR spacer
actatttatcaggttaaaaagctcgcctttctccgc	Protospacer
************************************

14. spacer 1.14|36770|33|CP021643|CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

acaaaaagcacaatatatattttcttgtgcgat	CRISPR spacer
acaaaaagcacaatatatattttcttgtgcgat	Protospacer
*********************************

15. spacer 1.15|36833|35|CP021643|CRT,PILER-CR matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

agcgtagtccttcagcgtttgcatccattccatcg	CRISPR spacer
agcgtagtccttcagcgtttgcatccattccatcg	Protospacer
***********************************

16. spacer 1.16|36898|37|CP021643|CRT,PILER-CR matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

ggtagcaatggagcaagtgcattgaaagcctttgagt	CRISPR spacer
ggtagcaatggagcaagtgcattgaaagcctttgagt	Protospacer
*************************************

17. spacer 1.17|36965|34|CP021643|CRT,PILER-CR matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

cttgtaaatttgtgcctaaatcttttatatcttt	CRISPR spacer
cttgtaaatttgtgcctaaatcttttatatcttt	Protospacer
**********************************

18. spacer 1.18|37029|36|CP021643|CRT,PILER-CR matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

tagacccaaattttatttttaaggcggagcgaaaca	CRISPR spacer
tagacccaaattttatttttaaggcggagcgaaaca	Protospacer
************************************

19. spacer 1.19|37095|36|CP021643|CRT,PILER-CR matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

cgcacggagtggataatgtaaatcaaaagtgtataa	CRISPR spacer
cgcacggagtggataatgtaaatcaaaagtgtataa	Protospacer
************************************

20. spacer 1.20|37161|37|CP021643|CRT,PILER-CR matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

gatgaaaattcggcgacttttagcgatattaccgaaa	CRISPR spacer
gatgaaaattcggcgacttttagcgatattaccgaaa	Protospacer
*************************************

21. spacer 1.21|35979|39|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaatggtcgcttgatgacgattttaagcgcgcttgggga	CRISPR spacer
aaatggtcgcttgatgacgattttaagcgcgcttgggga	Protospacer
***************************************

22. spacer 1.22|36044|38|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaactataaattccacgccatttatacctatcctcttt	CRISPR spacer
aaactataaattccacgccatttatacctatcctcttt	Protospacer
**************************************

23. spacer 1.23|36108|40|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaatcgaagtggggaatgagcgtgctctcttggctatata	CRISPR spacer
aaatcgaagtggggaatgagcgtgctctcttggctatata	Protospacer
****************************************

24. spacer 1.24|36174|39|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaacattagctacaaagctatcgtaaggggtcatatcct	CRISPR spacer
aaacattagctacaaagctatcgtaaggggtcatatcct	Protospacer
***************************************

25. spacer 1.25|36239|41|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaacgctctttttctatatttaaaaataccaagttatcgta	CRISPR spacer
aaacgctctttttctatatttaaaaataccaagttatcgta	Protospacer
*****************************************

26. spacer 1.26|36306|38|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaacattttgtaaaagataaatgacgtcgattatcctt	CRISPR spacer
aaacattttgtaaaagataaatgacgtcgattatcctt	Protospacer
**************************************

27. spacer 1.27|36370|38|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaactaatcttcaaatgatcgcaaagatcagtccttgt	CRISPR spacer
aaactaatcttcaaatgatcgcaaagatcagtccttgt	Protospacer
**************************************

28. spacer 1.28|36434|39|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaacaacaaaaacgtcgctacttttttctcgctctcgta	CRISPR spacer
aaacaacaaaaacgtcgctacttttttctcgctctcgta	Protospacer
***************************************

29. spacer 1.29|36499|42|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaattatgcaccaagtgcatcacttattgagccacctcctgc	CRISPR spacer
aaattatgcaccaagtgcatcacttattgagccacctcctgc	Protospacer
******************************************

30. spacer 1.30|36567|42|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaacgataatagagcttgctgtttttgtaaggcaagagttta	CRISPR spacer
aaacgataatagagcttgctgtttttgtaaggcaagagttta	Protospacer
******************************************

31. spacer 1.31|36635|39|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaacatctagtctttggctttgatagccgccatatatat	CRISPR spacer
aaacatctagtctttggctttgatagccgccatatatat	Protospacer
***************************************

32. spacer 1.32|36700|40|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaacactatttatcaggttaaaaagctcgcctttctccgc	CRISPR spacer
aaacactatttatcaggttaaaaagctcgcctttctccgc	Protospacer
****************************************

33. spacer 1.33|36766|37|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaatacaaaaagcacaatatatattttcttgtgcgat	CRISPR spacer
aaatacaaaaagcacaatatatattttcttgtgcgat	Protospacer
*************************************

34. spacer 1.34|36829|39|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaacagcgtagtccttcagcgtttgcatccattccatcg	CRISPR spacer
aaacagcgtagtccttcagcgtttgcatccattccatcg	Protospacer
***************************************

35. spacer 1.35|36894|41|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaacggtagcaatggagcaagtgcattgaaagcctttgagt	CRISPR spacer
aaacggtagcaatggagcaagtgcattgaaagcctttgagt	Protospacer
*****************************************

36. spacer 1.36|36961|38|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaaccttgtaaatttgtgcctaaatcttttatatcttt	CRISPR spacer
aaaccttgtaaatttgtgcctaaatcttttatatcttt	Protospacer
**************************************

37. spacer 1.37|37025|40|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

gaactagacccaaattttatttttaaggcggagcgaaaca	CRISPR spacer
gaactagacccaaattttatttttaaggcggagcgaaaca	Protospacer
****************************************

38. spacer 1.38|37091|40|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaaccgcacggagtggataatgtaaatcaaaagtgtataa	CRISPR spacer
aaaccgcacggagtggataatgtaaatcaaaagtgtataa	Protospacer
****************************************

39. spacer 1.39|37157|41|CP021643|CRISPRCasFinder matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 0, identity: 1.0

aaacgatgaaaattcggcgacttttagcgatattaccgaaa	CRISPR spacer
aaacgatgaaaattcggcgacttttagcgatattaccgaaa	Protospacer
*****************************************

40. spacer 1.15|36833|35|CP021643|CRT,PILER-CR matches to NZ_CP032181 (Citrobacter freundii strain AR_0116 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.743

agcgtagtccttcagcgtttgcatccattccatcg	CRISPR spacer
cccggtctccttcagcgtgttcatccattccacca	Protospacer
  **   *********** * ***********.*.

41. spacer 1.17|36965|34|CP021643|CRT,PILER-CR matches to NC_012732 (Rickettsia peacockii str. Rustic plasmid pRPR, complete sequence) position: , mismatch: 9, identity: 0.735

cttgtaaatttgtgcctaaatcttttatatcttt	CRISPR spacer
aatgtaaatttgttcttaaatcttttctctggat	Protospacer
  *********** *.********** * *   *

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP021642

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP021643

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection