Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP028729 Salmonella enterica subsp. enterica serovar Thompson strain HFCDC-SM-846 chromosome, complete genome 0 crisprs WYL,DinG,cas3,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK 0 0 7 0
CP029249 Salmonella enterica subsp. enterica serovar Thompson strain HFCDC-SM-846 plasmid p846, complete sequence 0 crisprs DEDDh 0 0 2 0

Results visualization

1. CP028729
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1320750 : 1369681 66 Salmonella_phage(40.38%) portal,protease,integrase,terminase,tail,tRNA,holin,head,capsid,lysis attL 1315048:1315062|attR 1340632:1340646
DBSCAN-SWA_2 1966321 : 2016861 58 Moraxella_phage(14.29%) tRNA,integrase,tail,protease attL 1960875:1960889|attR 2019534:2019548
DBSCAN-SWA_3 2122513 : 2133129 12 Morganella_phage(25.0%) NA NA
DBSCAN-SWA_4 2303588 : 2312759 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_5 2524727 : 2597770 102 Salmonella_phage(54.55%) protease,terminase,tail,tRNA,head,lysis NA
DBSCAN-SWA_6 2889484 : 2899365 12 Enterobacteria_phage(87.5%) NA NA
DBSCAN-SWA_7 4405126 : 4425575 25 Burkholderia_phage(40.0%) plate,tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP029249
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 5399 : 57500 46 Salmonella_phage(33.33%) head,transposase,tail NA
DBSCAN-SWA_2 111675 : 137494 28 Escherichia_phage(37.5%) transposase,integrase attL 131428:131487|attR 137487:138288
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage