CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP028913	Agromyces sp. 30A chromosome, complete genome	4 crisprs	csa3,WYL,Cas9_archaeal,cas3,DEDDh,DinG	0	2	1	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP028913_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP028913_2

419582-419673

Orphan

Consensus_repeat	Method
GCGACGACGATGCGGATGCTCATGCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP028913_2

>merge|CP028913|2|419582-419673|CRISPRCasFinder
GCGACGACGATGCGGATGCTCATGCGGTGTCCTCCAGCGGCAGGGTGGTCGCGGCATCTGCTCGAGCGACGACGATGCGGATGCTCATGCGG

>CP028913|2|2|419582-419673|CRISPRCasFinder
GCGACGACGATGCGGATGCTCATGCGG	TGTCCTCCAGCGGCAGGGTGGTCGCGGCATCTGCTCGA
GCGACGACGATGCGGATGCTCATGCGG

Protein	Signature genes	Signature genes Name	Protein_function
CP028913.1\|AWB94590.1\|425616_427134_-\|phosphodiesterase	unknown	unknown	gnl\|CDD\|235098
CP028913.1\|AWB96728.1\|411820_413629_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377200
CP028913.1\|AWB96729.1\|421683_422568_-\|ABC-transporter	unknown	unknown	gnl\|CDD\|224054
CP028913.1\|AWB94583.1\|414783_415452_+\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|225107
CP028913.1\|AWB94591.1\|427830_428757_+\|transcription-termination/antitermination-protein-NusG	unknown	unknown	gnl\|CDD\|180161
CP028913.1\|AWB94580.1\|410212_411412_+\|UDP-N-acetylmuramate-dehydrogenase	unknown	unknown	gnl\|CDD\|237552
CP028913.1\|AWB96730.1\|422679_423294_-\|amino-acid-transporter	unknown	unknown	gnl\|CDD\|224198
CP028913.1\|AWB94577.1\|407536_409090_+\|amino-acid-transporter	unknown	unknown	gnl\|CDD\|223605
CP028913.1\|AWB94578.1\|409339_409786_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379194
CP028913.1\|AWB94584.1\|415417_416974_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239486
CP028913.1\|AWB94589.1\|423372_424278_+\|ArgP/LysG-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|235144
CP028913.1\|AWB96732.1\|427490_427766_+\|preprotein-translocase-subunit-SecE	unknown	unknown	gnl\|CDD\|236066
CP028913.1\|AWB94585.1\|417125_418829_-\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|235531
CP028913.1\|AWB94582.1\|413546_414791_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|226951
CP028913.1\|AWB94588.1\|420877_421687_-\|ABC-transporter	unknown	unknown	gnl\|CDD\|223912
CP028913.1\|AWB96731.1\|424318_425536_-\|aspartate-aminotransferase	unknown	unknown	gnl\|CDD\|235596
CP028913.1\|AWB94593.1\|429488_430178_+\|50S-ribosomal-protein-L1	unknown	unknown	gnl\|CDD\|180071
CP028913.1\|AWB94579.1\|409785_410211_+\|acyl-dehydratase	unknown	unknown	gnl\|CDD\|239537
CP028913.1\|AWB94592.1\|428913_429342_+\|50S-ribosomal-protein-L11	unknown	unknown	gnl\|CDD\|234661
CP028913.1\|AWB94581.1\|411437_411824_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235476

Protein	Function_ID	Function_description	E-value
CP028913.1\|AWB94590.1\|425616_427134_-\|phosphodiesterase	gnl\|CDD\|235098	PRK03007, PRK03007, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional.	1.84343e-58
CP028913.1\|AWB96728.1\|411820_413629_-\|hypothetical-protein	gnl\|CDD\|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	5.74682e-16
CP028913.1\|AWB96729.1\|421683_422568_-\|ABC-transporter	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.69578e-81
CP028913.1\|AWB94583.1\|414783_415452_+\|DNA-binding-response-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.58431e-56
CP028913.1\|AWB94591.1\|427830_428757_+\|transcription-termination/antitermination-protein-NusG	gnl\|CDD\|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	3.33701e-74
CP028913.1\|AWB94580.1\|410212_411412_+\|UDP-N-acetylmuramate-dehydrogenase	gnl\|CDD\|237552	PRK13903, murB, UDP-N-acetylmuramate dehydrogenase.	5.54362e-144
CP028913.1\|AWB96730.1\|422679_423294_-\|amino-acid-transporter	gnl\|CDD\|224198	COG1279, COG1279, Lysine efflux permease [General function prediction only].	1.54696e-63
CP028913.1\|AWB94577.1\|407536_409090_+\|amino-acid-transporter	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	1.61362e-27
CP028913.1\|AWB94578.1\|409339_409786_+\|hypothetical-protein	gnl\|CDD\|379194	pfam13452, MaoC_dehydrat_N, N-terminal half of MaoC dehydratase. It is clear from the structures of bacterial members of MaoC dehydratase, pfam01575, that the full-length functional dehydratase enzyme is made up of two structures that dimerize to form a whole. Divergence of the N- and C- monomers in higher eukaryotes has led to two distinct domains, this one and MaoC_dehydratas. However, in order to function as an enzyme both are required together.	1.73588e-35
CP028913.1\|AWB94584.1\|415417_416974_-\|hypothetical-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	2.56432e-21
CP028913.1\|AWB94589.1\|423372_424278_+\|ArgP/LysG-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|235144	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator.	4.75291e-133
CP028913.1\|AWB96732.1\|427490_427766_+\|preprotein-translocase-subunit-SecE	gnl\|CDD\|236066	PRK07597, secE, preprotein translocase subunit SecE; Reviewed.	4.47946e-16
CP028913.1\|AWB94585.1\|417125_418829_-\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|235531	PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated.	0
CP028913.1\|AWB94582.1\|413546_414791_+\|ATP-binding-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.93316e-16
CP028913.1\|AWB94588.1\|420877_421687_-\|ABC-transporter	gnl\|CDD\|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	4.18596e-17
CP028913.1\|AWB96731.1\|424318_425536_-\|aspartate-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	0
CP028913.1\|AWB94593.1\|429488_430178_+\|50S-ribosomal-protein-L1	gnl\|CDD\|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	8.10367e-135
CP028913.1\|AWB94579.1\|409785_410211_+\|acyl-dehydratase	gnl\|CDD\|239537	cd03453, SAV4209_like, SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.	1.11008e-50
CP028913.1\|AWB94592.1\|428913_429342_+\|50S-ribosomal-protein-L11	gnl\|CDD\|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	7.7347e-94
CP028913.1\|AWB94581.1\|411437_411824_-\|hypothetical-protein	gnl\|CDD\|235476	PRK05454, PRK05454, glucans biosynthesis glucosyltransferase MdoH.	0.00143413

>CP028913.1|AWB94585.1|417125_418829_-|long-chain-fatty-acid--CoA-ligase
MNAYEHRPWLAHYAEGVPPEIDEPSQTLVDMIDDAVRRFRRRTALEFFGAETSYRELGEQIASAAEGLRRLGVRAGDRVALVLPNCPQHVVAFYAVLRLGAIVVEHNPLYTPPELRHQFEDHGARVAIVWNSVADTVAEFPSDIRPEHIVAVDLTRALPFGKRMALRLPIPKARRSRAALTTTPRARGLVDWEHLTSRRALARRHPRPTLDDTAVLQYTSGTTGSPKGAVLSHRNLRANAMQGRAWVPGLVEGEEVFYAVLPLFHAYGMTLCLTFAMSIGARLVLFPKFDSGLVLDAARHSPPTFLPAVPPIYDQLVRAAVRQPRALRSIRFAISGAMSLPIATVDRWESATGGLLVEGYGMTESSPVALGNPMGPTRRPGTVGVPFPSTDIRVVDPDDPEVDRPVGEPGELLVRGPQVFQGYWRRPAETTETLLPGGWLRTGDIVRVSEDGFVTIVDRVKELIITGGFNVSPSEVEAALLAHPDVRGAAVVGLPRGSGGEAVAAGVELREGAVFDEAALREFCRTSLTPYKVPRRIEPFDELPRSLIGKVLRRQVRDVLLDRAAAK
>CP028913.1|AWB94584.1|415417_416974_-|hypothetical-protein
MNARRSHPAVDRFWSRVSGFADKGVLWWTIAGVLAVTGRRRAAARGLGSLLVASALTNVIAKRVFGGDRPLLADVPVGRHLPKPPITPSFPSGHSASAAAFATGIAIESPRLGAALVPAALGVGYSRLHTGAHWLSDVVGGLALGAGVAGLSALVARPGTTPADDGSAPSGTDRRLPASPDGEGVYIVVNRSSGTSVLRSDPLRVLERRLPRAEIHLLDDGEDPQAAARAALSRDDPPAIVGVCGGDGSVAAVAHEARLAGVPLFVVPGGTFNHFARTAGAASVDLAVDALQRGEGVRADVAELRFADGPPITVLNTASVGLYPDFVAERERHEEHWGKWLAAILAAARVLRRSAPVTVVVDGRRARVWTLYVGVGVNDAGIPAPMQRRRLDGGELDVRVLHAGSRVRAAGALAFGRRTSAVLRRVRLLPERLESFTTESIEVIVRPRQGQPPGFAHDGEVSIEAPAEASARTAVPGYRTTVRIVPAALDVYRPASTELPDASGGTSLTATAGHSPTP
>CP028913.1|AWB94583.1|414783_415452_+|DNA-binding-response-regulator
MAERVRVVIVDDHSIFRSGLKADLDDSIEVVGEAHDVESAVAAVTDAAPDVVLLDVHLPGLAVPAGTSGGAEVIRRAAASVPSTRFLALSVSDKAEDVVGVIRAGARGYITKGSSGTDVSRAVHAVAGGDAVFSPKLAGFVLDAFGAAVGETAAASDELDRLSAREQEVMRLIARGYAYKEVAAELFISTKTVETHVSAVLRKLQLSSRHELTAWANARRLL
>CP028913.1|AWB94582.1|413546_414791_+|ATP-binding-protein
MDTRAIGTTDAAASVPAGGVHPGTAPRMTRPRACVATGVSAGLARHLGWPVWVVRAAFVATSFASGAGLLLYLWLWVLTPWAPGESRPTRRAPVAWVLVVASAVSLLAAWATSGLVVETDGTGLDRWIFAVLAGVGLAVASGAWATFIDRPDPDRGPRNEFAIRVVATSLLAITALALVFGPSAYRYPVPTFVAALAAVIGIALVYVPTLIASWRELTAERTRRIREEQRSEIAAHLHDSVLQTLALIQNRAGATSEVARIARAQERELRDWLFAGDTPADSDLGTDLRDFAAALEIDYPVTVDVVVVGESRERASGEVAAAAREAMLNAARHAGGEVSVYVESTPETVEVFVRDRGPGFALADVPRDRLGVRESIIGRMRRAGGSGEVRPGAGGVGTEVRLRFPAERGEPVRG
>CP028913.1|AWB96728.1|411820_413629_-|hypothetical-protein
MRGAVPGCTPPAGTDAAASVVPIARVSMPAIQADRGEIAPAPVARSGSNQGFTPWRGIRRCCQHRSMETNPTAPEADPVQDDAKGDSAASGPTTPEAAGSPPSSGGPGAATPAPGTGTGFSPWLRRLGVPRRSGWLGGVCAGVAARLGIDPIIVRGIVVVIALLGAPLVLLYAVAWLLLPDTDGEIHFERLTRGIVDPAIVGIAVMGVIGLVPLVQGGWLGWRWWPDMTISDPIFGFNLTWPLRVLWVLLIVGAVIALVVWLARRASQNPPDGGGPRMASAATAAASGYPASTAFAASDAPATTGTAASTEPPVPANGADAAAIAEWRAQHEAWRLSHAEWKSGQESAERAARARAAAENKAKAIALTAQADEARAARRASRPRASAAFVFTFLGLALVAGSIAAVWALGRPSVAGFAIPIALAAVTMLLSLGMVIAALRRRRSGALAFTTTLATASMMVAVLASSFMPQGVLIPPGHSVSLDRTQRLVQPFGDAYLYATPSLIGDSTPVIELRQGTGDTWITLDEGAEIELDAREAGPVQLFITSPDGSVRSTSQLGDADSRVLMLGGEPAVAEDLTGDADARIVLEQGSGMVHIEIREGA
>CP028913.1|AWB94581.1|411437_411824_-|hypothetical-protein
MTMTTNNQDSGQPTTAPDAAVTAILADWGTPAAGAPAAISPDNGDPAARGTTRPTVRWGALVWALIFGATAATTLWVVVDPARRDAVGGWLTSLSPLAAVLYAFIALGVVVAMFGIVGLLRRGERTRR
>CP028913.1|AWB94580.1|410212_411412_+|UDP-N-acetylmuramate-dehydrogenase
MSGDIRFAEYTTLRVGGPIDRLLTATTQRDLVDLAGETWATDAPWLALGGGSNLLVGDEGFDGTVIRVATHGIEVLPGSGDEHSVRVRVQAGESWDDLVAWTVEHGYSGIEALSGIPGSVGAAPVQNIGAYGQELASTLVAIEFLDEGADAPRRMTADELELAYRTSVLKQGLRGIVVTVELELHDTAAEREVLGEALGRPIAYGQLAAALRVQQGDRVPIAKVRESVLELRASKGMVLDAADADSVSAGSFFTNPIVGEHVARTLPAAAPRWYVEPEAPDEVIPLGSLGSESPLDAFLAHQAELEASDSVSADRNASETGPLVKLSAAWLIEQSGIGRGFALPGSRAAISSKHTLALTNRGDASADEIVQLARFVQSRVQAEFGIVLRPEPVLVGVEL
>CP028913.1|AWB94579.1|409785_410211_+|acyl-dehydratase
MPAPDFASLAVGDIVAEQSFPLTRDSLVRYAGASGDFNPIHYRDDVAHAVGLPGVLAHGMLTMGFAVQPVVDWAGDPGRVVDYQVRFTRPVVVDPAIGAVVSVIAKVGQLDEAETVARIDLTVKVGEETVLGKAQVRVALG
>CP028913.1|AWB94578.1|409339_409786_+|hypothetical-protein
MPVNPELQGRVLPPTEPYLVGREKVREFARAVFATNPINLDPEAARAAGYDDVVAPPTFPIVVQELTLAQLLAEPDAGIDFSRVVHGDQRFSYSRPVVAGDLLTATLTVSSVKTLGAHSIVVAESVIVDADGAHVVTALSQLVVRGED
>CP028913.1|AWB94577.1|407536_409090_+|amino-acid-transporter
MTHPSDNPAPITEASRAIDGAAGGLSKKGLSAGSVGLIGAIVIGISCIAPAYTLTAALGPTVSEVGVQVPAIILVGFIPMLLVAFGYRELNRRMPDSGTSFTWATRAFGPWVGWLAGWGLVAATILVLSNLAGIAVDFLFLLISQIAGNPDIADIAANPFVNVVTCLLFMLGATWISYRDMQTTQKLQYWLVGFQVAVLVIFSVAALVEVANGNAFDATAIELSWFNPFAVESFSAFAAGLSLSIFIFWGWDVTLTMNEETRGSEKTPGRAATITVVTIVVLYLLIAVSLIAFAGVGTGEFGLGNPDIQDNVFFHLAGPILGPLAVLVSLAVLTSSASSLQSTFVSPARTLLAMGHYGALPEKFAKVSPRFFTPGYATIVSAIVASVFYAVMRFVSENVLWDTITALGMMICFYYGITAFACVWFFRAVWFRSVRNVFFTLLFPLVGGVILAVLFFTTLIDSMDPDYGSGSSVAGLGLVFVLGVVVLLSGVVIMLWQWRKRPAFFRGETLSRAVAED
>CP028913.1|AWB94588.1|420877_421687_-|ABC-transporter
MTTNLMAQGASRLGLETKIYFRAPDTLFFTFFFPFVMLAIFTAAFSASGEVGPPGNEISIGALYLPGMIAAGILLSGVQNLAIDIALEKSNGTLKRLGGTPLSPVGYFLGKIGQVFVTGGLQAALLILAGWLVLGIDLPTDPAKWLTFAWVFVLGLTTCALLGIALSALPRSGKSASAVVIPVVLLLQFISGVYLQWDMLPEWLQNIASLFPLKWIAQGMRSVFLPDGWEAAEQGGTWNLAGVAIALGIWLVVGFVLSRLTFRWIRRDA
>CP028913.1|AWB96729.1|421683_422568_-|ABC-transporter
MTGTDAAVHIRGLRKLYGTVAAVDGIDLDIAHGETFALLGPNGAGKSTTVEILEGYRVRTEGEVSVLGVDPARGGLDWKSRIGIVLQSTGETGLLTVTEILRNFASLYPNPRDIDEVIAAVGLEAKAKTRIAKLSGGQQRRVDVALGIVGRPELLFLDEPTTGFDPEARRQFWQLIRSLKADGTTIVLTTHYLDEAAQLADRAGVIAGGRLVDVGGIHEIGGAEARVPIVRWVDAGGAPREVRTEEPGLVVASVVAELGGEPAGLEVIRPTLEDIYLQLVRNTAPAATTEEAFA
>CP028913.1|AWB96730.1|422679_423294_-|amino-acid-transporter
MSSALAGLGLGLSLIVAIGAQNVFVLRQGIRREHVFTVAAICALSDLALILVGVSGIGAVLAAVPWLVGVIRWAGAAFLVGYGALAARRAIRPSGAALDAGASPGAGAGTLAAAALTCLALTWLNPHVYLDTVFLLGSVANGHGDERWAFAAGAGLASLVWFFGLAYGARLLGRVLASPRAWRVLDGLIALVMVTLGVLLVLPH
>CP028913.1|AWB94589.1|423372_424278_+|ArgP/LysG-family-DNA-binding-transcriptional-regulator
MEIPLDLARTLAVVIDEGTFDAAARRLRITPSAVSQRVKTLEQQLGRVLVVRSKPARATEAGAPIVRLARQIALLEHDALAEFGPHEASARPISVPLAVNADSLATWFLPALARVGEHHPVVFDLHRDDQDFTAGLLESGTVMGAVTSQAAPVAGCLVRPLGVMRYEAVATPAFAARWALADRDEARSAAALASAPLVDFDRRDDLQREYLSAIGVDPDAPPRHYVPASHDFATAIKLGLGWGMLPAFQSAGEIERGELVRLGGAPIDVPLHWQQWNLRSTLLTAIADELAAEARTALARS
>CP028913.1|AWB96731.1|424318_425536_-|aspartate-aminotransferase
MTEKPRLSARIATIAESATLKVDAKAKALQAEGRPVISYAAGEPDFATPEYIVEAALAATHDPKNYRYTPAAGLPELREAIAAKTLRDSGLEVSPGRVVVTNGGKQAVYQAFQTLLDPGDEVLVPTPYWTTYPEVIKLAGGRQVDVFAGADQGYLVTVDQLEAARTDRTKVLLFVSPSNPTGAVYPADEVRAIGQWALEHGIWVVSDEIYQNLTYAEEPDGVPPRALSIVEAVPELANQTILVNGVAKTYAMTGWRLGWMVGPADIIKGAANLQSHLSSNVANISQRAAIAALTGPQDAVEEMRRAFDRRRRTIVAELSKIEGMTVPVPQGAFYVYPDVSGLLGREWGGVTPTTSLELADLILEQAEVAAVPGEAFGPSGYLRLSYALGDAPLLEGVQRLQRLFA
>CP028913.1|AWB94590.1|425616_427134_-|phosphodiesterase
MPIDRASRLVPEPRSSAEVIGEHSQFRLDLERIRFSPYFSRLSAVTQVIAQPGAGPLIHNRLTHSIKVTAVARAIAVKLTDAAAPTRAFALEHGCDAVVVQAAASAHDLGHPPFGHLGERVLDRLSRETLGLVDGFEGNAQSYRILTALDVSEAAPRGLNLTAAVRTAVAKYPWTRSIDDASMGGGPLPRGLRRSEHGIDVLKFSAYDIDAPDLDQARAGQPPMQQSLECSIMDIADDIAYSIHDVDDFYRAGVLSQGAVAREFRGWVEAGASLRELDDEALAARTAPPGSALEALRRKLWRSDAWVADDDAFADAVDVVADDLVDGLLAIPFDGSISSERALSSFTNRWISHLQSSVVPAPRDVVRSGLVTLDRRAWHEVEILKFVHRHFILDRADIVMYQRGLSRVLARAVKGLTAWATDEHDRDRVPQRLKELVEIATDGYAHLRDSRPDSLPIPAAGDVRRLGVGRGVIDYVASLSDDQALAVSEALDGRPDRLWDIGQNL
>CP028913.1|AWB96732.1|427490_427766_+|preprotein-translocase-subunit-SecE
MARKVIDEPSEDVVANAKRDRAARRNPFSRVALFIRQVIAELRKVVTPTRKELLSFTTVVLVFVVIMMAIVWAFDQVFGWVVLYVFGTPGV
>CP028913.1|AWB94591.1|427830_428757_+|transcription-termination/antitermination-protein-NusG
MSRTEHDDVDWATAAEQSAEDDEAQTGSVLEHEEESVEPAEQRAVHIVDDEGNDVDLDAVLDAMAESSDPEADAVIDDALDIDSVEEAEAAAEAVIEEEEEQADPYAEFRAELRFLPGKWYVIHSYAGFERRVKANIEQRRESMAMADYIYQVEVPMEDVVEIKNGQRKMVTRVRIPGYVLVRMDLNEESWSVIRHTPGVTGFVGNAHNPTPLRFEEAFGMLKSLVEIKDVAPVKGAKAGAATGAARAIPAEVDFEVGETITIKDGSFAGLPGTISEIKPESGKLIVLVSLFERETPVELSFDQVTKL
>CP028913.1|AWB94592.1|428913_429342_+|50S-ribosomal-protein-L11
MAPKKKVTGLIKLQIKAGAANPAPPIGPALGQHGVNIMEFCKAYNAATEAQRGNVIPVEITVYEDRSFTFVLKTPPAAELIKKAAGVAKGSGVPHTTKVGKLTQAQVREIAEAKMVDLNANDLDAASKIIAGTARSMGITVE
>CP028913.1|AWB94593.1|429488_430178_+|50S-ribosomal-protein-L1
MAQKSKAYRAAAEKIEDGKFYTPSEAVALAKETGSAKFDSTVEVALKLGVDPRKADQMVRGTVILPHGTGKTARVIVFATGPAAEAAIAAGADEVGGAELIEKVAGGYTAFDSAVSTPELMGQVGRLGKVLGPRGLMPNPKTGTVTPNVGQAVSDIKGGKIEFRVDKHANVHFVVGKASFTQEQLEENAKAALEEVLRLKPSSSKGRYIQKGAVSTTFGPGIPLDVNAI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP028913_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP028913_4

2234290-2234379

Orphan

Consensus_repeat	Method
AAGACCCCAGCGCCCCGGCGCGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP028913_4

>merge|CP028913|4|2234290-2234379|CRISPRCasFinder
AAGACCCCAGCGCCCCGGCGCGCGCAGCATCGGTCGGGCGATCGAATCCCCCATCCTCCGCCAAGGAAGACCCCAGCGCCCCGGCGCGCG

>CP028913|4|4|2234290-2234379|CRISPRCasFinder
AAGACCCCAGCGCCCCGGCGCGCG	CAGCATCGGTCGGGCGATCGAATCCCCCATCCTCCGCCAAGG
AAGACCCCAGCGCCCCGGCGCGCG

Protein	Signature genes	Signature genes Name	Protein_function
CP028913.1\|AWB96053.1\|2244674_2246555_-\|allantoinase	unknown	unknown	gnl\|CDD\|238640
CP028913.1\|AWB96048.1\|2237748_2239008_+\|DNA-polymerase-domain-containing-protein	unknown	unknown	gnl\|CDD\|240135
CP028913.1\|AWB96046.1\|2235114_2235765_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|235142
CP028913.1\|AWB96043.1\|2229063_2230149_-\|acyl-CoA-desaturase	unknown	unknown	gnl\|CDD\|239583
CP028913.1\|AWB96037.1\|2221924_2223034_-\|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|237845
CP028913.1\|AWB96042.1\|2226105_2228562_-\|DNA-polymerase-III-subunit-gamma-and-tau	unknown	unknown	gnl\|CDD\|236090
CP028913.1\|AWB96050.1\|2242012_2243287_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224662
CP028913.1\|AWB96052.1\|2244321_2244678_-\|hydroxyisourate-hydrolase	unknown	unknown	gnl\|CDD\|274364
CP028913.1\|AWB96044.1\|2230474_2231686_-\|acetate-kinase	unknown	unknown	gnl\|CDD\|234680
CP028913.1\|AWB96047.1\|2235776_2237666_-\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
CP028913.1\|AWB96926.1\|2234802_2235042_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367272
CP028913.1\|AWB96927.1\|2239022_2239859_+\|3'-kinase	unknown	unknown	gnl\|CDD\|226100
CP028913.1\|AWB96049.1\|2239989_2241174_-\|o-succinylbenzoate-synthase	unknown	unknown	gnl\|CDD\|239433
CP028913.1\|AWB96045.1\|2231682_2233851_-\|phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|235537
CP028913.1\|AWB96925.1\|2228742_2229012_+\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|274340
CP028913.1\|AWB96038.1\|2223144_2224419_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|235843
CP028913.1\|AWB96051.1\|2243352_2244318_-\|urate-oxidase	unknown	unknown	gnl\|CDD\|274554
CP028913.1\|AWB96040.1\|2225107_2225467_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366932
CP028913.1\|AWB96041.1\|2225505_2226102_-\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|234616
CP028913.1\|AWB96039.1\|2224545_2225040_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP028913.1\|AWB96053.1\|2244674_2246555_-\|allantoinase	gnl\|CDD\|238640	cd01315, L-HYD_ALN, L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.	0
CP028913.1\|AWB96048.1\|2237748_2239008_+\|DNA-polymerase-domain-containing-protein	gnl\|CDD\|240135	cd04865, LigD_Pol_like_2, LigD_Pol_like_2: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 2. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. It has been suggested that LigD Pol contributes to NHEJ-mediated DNA DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The Pol domains of PaeLigD and Mycobacterium tuberculosis (Mt)LigD are stimulated by manganese, are error-prone, and prefer adding rNTPs to dNTPs in vitro; however PaeLigD and MtLigD belong to other subgroups, proteins in this subgroup await functional characterization.	1.16006e-115
CP028913.1\|AWB96046.1\|2235114_2235765_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|235142	PRK03624, PRK03624, putative acetyltransferase; Provisional.	6.49261e-09
CP028913.1\|AWB96043.1\|2229063_2230149_-\|acyl-CoA-desaturase	gnl\|CDD\|239583	cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria. These desaturases are required for the synthesis of highly unsaturated fatty acids (HUFAs), which are mainly esterified into phospholipids and contribute to maintaining membrane fluidity. While HUFAs may be required for cold tolerance in bacteria, plants and fish, the primary role of HUFAs in mammals is cell signaling. These enzymes are described as front-end desaturases because they introduce a double bond between the pre-exiting double bond and the carboxyl (front) end of the fatty acid. Various substrates are involved, with both acyl-coenzyme A (CoA) and acyl-lipid desaturases present in this CD. Acyl-lipid desaturases are localized in the membranes of cyanobacterial thylakoid, plant endoplasmic reticulum (ER), and plastid; and acyl-CoA desaturases are present in ER membrane. ER-bound plant acyl-lipid desaturases and acyl-CoA desaturases require cytochrome b5 as an electron donor. Most of the eukaryotic desaturase domains have an adjacent N-terminal cytochrome b5-like domain. This domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain the residues: HXXXH, HXX(X)HH, and Q/HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the homolog, stearoyl CoA desaturase.	1.6662e-67
CP028913.1\|AWB96037.1\|2221924_2223034_-\|aspartate-semialdehyde-dehydrogenase	gnl\|CDD\|237845	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional.	0
CP028913.1\|AWB96042.1\|2226105_2228562_-\|DNA-polymerase-III-subunit-gamma-and-tau	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	0
CP028913.1\|AWB96050.1\|2242012_2243287_-\|ATP-binding-protein	gnl\|CDD\|224662	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism].	2.0213e-49
CP028913.1\|AWB96044.1\|2230474_2231686_-\|acetate-kinase	gnl\|CDD\|234680	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed.	0
CP028913.1\|AWB96047.1\|2235776_2237666_-\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
CP028913.1\|AWB96926.1\|2234802_2235042_-\|hypothetical-protein	gnl\|CDD\|367272	pfam02956, TT_ORF1, TT viral orf 1. TT virus (TTV), isolated initially from a Japanese patient with hepatitis of unknown aetiology, has since been found to infect both healthy and diseased individuals and numerous prevalence studies have raised questions about its role in unexplained hepatitis. ORF1 is a large 750 residue protein. The N-terminal half of this protein corresponds to the capsid protein.	0.00111147
CP028913.1\|AWB96927.1\|2239022_2239859_+\|3'-kinase	gnl\|CDD\|226100	COG3570, StrB, Streptomycin 6-kinase [Defense mechanisms].	4.20143e-79
CP028913.1\|AWB96052.1\|2244321_2244678_-\|hydroxyisourate-hydrolase	gnl\|CDD\|274364	TIGR02962, Probable_5-hydroxyisourate_hydrolase_R09H10.3, hydroxyisourate hydrolase. Members of this family, hydroxyisourate hydrolase, represent a distinct clade of transthyretin-related proteins. Bacterial members typically are encoded next to ureidoglycolate hydrolase and often near either xanthine dehydrogenase or xanthine/uracil permease genes and have been demonstrated to have hydroxyisourate hydrolase activity. In eukaryotes, a clade separate from the transthyretins (a family of thyroid-hormone binding proteins) has also been shown to have HIU hydrolase activity in urate catabolizing organisms. Transthyretin, then, would appear to be the recently diverged paralog of the more ancient HIUH family. [Purines, pyrimidines, nucleosides, and nucleotides, Other].	1.39688e-51
CP028913.1\|AWB96045.1\|2231682_2233851_-\|phosphate-acetyltransferase	gnl\|CDD\|235537	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed.	0
CP028913.1\|AWB96925.1\|2228742_2229012_+\|DNA-binding-protein	gnl\|CDD\|274340	TIGR02890, conserved_hypothetical_protein, regulatory protein, yteA family. Members of this predicted regulatory protein are found only in endospore-forming members of the Firmicutes group of bacteria, and in nearly every such species; Clostridium perfringens seems to be an exception. The member from Bacillus subtilis, the model system for the study of the sporulation program, has been designated both yteA and yzwB. Some (but not all) members of this family show a strong sequence match to Pfam family pfam01258 the C4-type zinc finger protein, DksA/TraR family, but only one of the four key Cys residues is conserved. All members of this protein family share an additional C-terminal domain. Smaller proteins from the proteobacteria with just the N-terminal domain, including DksA and DksA2 are RNA polymerase-binding regulatory proteins even if the Zn-binding site is not conserved. [Unknown function, General].	3.36968e-17
CP028913.1\|AWB96038.1\|2223144_2224419_-\|aspartate-kinase	gnl\|CDD\|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	0
CP028913.1\|AWB96051.1\|2243352_2244318_-\|urate-oxidase	gnl\|CDD\|274554	TIGR03383, Structure_Of_Uricase, urate oxidase. Members of this protein family are urate oxidase, also called uricase. This protein contains two copies of the domain described by the uricase model pfam01014. In animals, this enzyme has been lost from primates and birds. [Central intermediary metabolism, Other].	2.63911e-152
CP028913.1\|AWB96040.1\|2225107_2225467_-\|hypothetical-protein	gnl\|CDD\|366932	pfam02136, NTF2, Nuclear transport factor 2 (NTF2) domain. This family includes the NTF2-like Delta-5-3-ketosteroid isomerase proteins.	5.26619e-06
CP028913.1\|AWB96041.1\|2225505_2226102_-\|recombination-protein-RecR	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	8.42214e-114
CP028913.1\|AWB96049.1\|2239989_2241174_-\|o-succinylbenzoate-synthase	gnl\|CDD\|239433	cd03317, NAAAR, N-acylamino acid racemase (NAAAR), an octameric enzyme that catalyzes the racemization of N-acylamino acids. NAAARs act on a broad range of N-acylamino acids rather than amino acids. Enantiopure amino acids are of industrial interest as chiral building blocks for antibiotics, herbicides, and drugs. NAAAR is a member of the enolase superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.	5.14657e-163

>CP028913.1|AWB96045.1|2231682_2233851_-|phosphate-acetyltransferase
MAHRIYICSAEGNTGKSTVALGALDTLTRRATRVGVFRPIARSTAERDYVLELLLAHEGVVPIPYDDAVGVRYDDVHADPEGALATIVSRFKAVEDRCDAVVIIGSDFTDVGSPTELAYNARIAANLGAPVLLVLGGRVGQGQGRSTSERLGYSDARSPEDLAQLTELAVEELEREHATLLGIVTNRADPERLQEIVEVVAVAAGQNGVRATGFGSAAEASVATWAIPEDPYLVAPSMQAIMVAVDGALHAGDPELLNREALGVVIAAMSMENVLTRLTEGAVVVVPGDRSEVLLGVLTAHSSATFPSLSGIVLNGGFPMAEQVDRLVDGLKAGLPIIRTELSSYDTALAITHTRGRLAAESQRKRDTALALFEKHIDGQALLDLLDVARPEVVTPLMFEYDLLERARHARKRIVLPEGYDDRVLRAAATLLARDVADLTILGEEIEVRSRAIGLGLDISNAEVLSNHDFVHVTRFAEEYQRRRAHKGVTLEQARETVQDVSYFGTMMVELGLADGMVSGAAHTTAHTIRPSFEVIKTKPGVDVVSSVFLMALADRVLVYGDCAIVPDPTAEQLADIAISSAETATQFGIAPRVAMLSYSTGESGSGADVDKVRRATELVRERAPHLAVEGPIQYDAAADAAVARTKLPESEVAGRATVFIFPDLNTGNNTYKAVQRSSGAVAIGPVLQGLRKPINDLSRGALVQDIVNTVAITAIQAADAS
>CP028913.1|AWB96044.1|2230474_2231686_-|acetate-kinase
MSIVLVVNSGSSSLKYQLIDVEASQTLASGLVERIGRGVGHARHHRDGSGDDAAGSTWDAAVEVPDHEAAFAVMLEAFAAHGPSLEAHPPIAVGHRVVQGGARFFEPTVITPLVKINIDELAALAPLHNPANLEGIEAAQRAFPDVPHVAVFDTAFHQTMPPAAYTYAIDRELAAKHRIRRYGFHGTSHRLVSRAAAAFLGRPVEELRMIVLHLGNGASACAVAEGRSVETSMGMTPLEGLVMGTRSGDIDPAVLLHLERRAGLDADGVDRLLNSQSGILGLGGHADMRDLVAARDAGDEAATLALDVYAHRVRGYVGAYAAQLGRVDAIVFTAGVGENAPLVRELSLAGLEAFGVELDAERNHARGDDARRISTDASKTAVLVVPTNEELEIARQTLELVAA
>CP028913.1|AWB96043.1|2229063_2230149_-|acyl-CoA-desaturase
MSPVIRTAGRRRDDVDPAQSGFARLSRQIKAEGLLDRFVGFYVRKAVFWALVLGAAVAASVAIGDSWWQLAVAGALGVVFTQFAFMAHEASHRQVFRSGPANDWAGLILANLVVGISYSWWMNKHTRHHGNPNVIGRDPDIAKDTISFLEEDAAASRGLVRLITRKQGYLFFPLLLLEGINLHVHGIRHVLGKGAVKRRRLEITLIAVRLVGVVALVFWAFPPLLATVFLLVQLGVFGVYMGASFAPNHKGMPLIPRGVRVDFLERQVLTSRNIRGGRFMDSFMGGLNYQIEHHLFPSMARPALARTQQIVREYCRENDVRYTETGLVESYAIVIAYLNRVGLAARDPFDCPMISEYRRRD
>CP028913.1|AWB96925.1|2228742_2229012_+|DNA-binding-protein
MTEVRAARSGASADDEHDPEGPTMTQEWSQRTAVLADARAELADIDHALARIADGTYGTCNKCGKRITVPRLEARPTAELCIDCARLAR
>CP028913.1|AWB96042.1|2226105_2228562_-|DNA-polymerase-III-subunit-gamma-and-tau
MVTALYRRYRPETFAEMIGQSQVTEPLMTALRTDRVNHAYLFSGPRGCGKTTSARILARCLNCAEGPTDVPCGVCPSCVELSRGGGGSLDVVEIDAASHNGVDDARDLRERAVFAPARDRFKIFILDEAHMVTPQGFNALLKLVEEPPEHIKFIFATTEPDKVLGTIRSRTHHYPFRLVPPGPMLEYVQQLCTEEGVEVAPGVLPLVVRAGGGSPRDALSLLDQLIAGSEGPTIDYERAVALLGYTHGALLDEVVDAIGAGDAAGAFAAADRVVQTGQDPRRFVEDLLERLRDLIVVAASSPEAAAAVLRGVPEDELARMAAQAAAFGQAELSRVADLVNQTLTEMTGATSPRLHLELMLARVLVPSADDTERGALARVERLERRVGVAAAAEGPAAGTESRPAAQATAAPVAPAARTAPEPARQTAAAATSPAVPAADAVAAATVAAAKPAAEAAAPVKPVGPVTLQQIRDAWPEVLASLQRTKRSAWMVAFTAQVRDFRDGDVLVLTFPSEHDVAGFRGGAPGQSVSELLRGAIVEVLGVRVKFIARVDAPGGAQTAAPAVPEAAPSAAPAPSAASAASAPAEAAPSASAPGGPSPAGSRSDSDRAPTRSASGAARPAPSGSAGMLSTAAATPAAATAEAGSTSAAPAGPVDSWATVAIPRDPTSDADAAVGAGAVYTSASARTATAVAERPQGDAAASDDRSSGPSSAPAIAPAPASGPTGLDELPDDADAPPEDEEPPFDPGPEPEMVVEAPAHAPAPAPAPAPARARPLPATARAAVDGGVQRYGEAVVREVLGATFLEEVEAPARPGFGERG
>CP028913.1|AWB96041.1|2225505_2226102_-|recombination-protein-RecR
MYEGIVQELIDELGRLPGIGPKSAQRIAFHIVQTEHFDVSRLAEILMQIREKVRFCEICGNVSEEATCGICRDPRRDPALICVVEEAKDVVAIERTREFRGFYHVLGGAISPIDGIGPDELRIRQLMQRLADGTVTEVIIATDPNLEGEATATYLSRLLTTLEIRVTRLASGLPVGGDLEYADEVTLGRAFEGRRVVG
>CP028913.1|AWB96040.1|2225107_2225467_-|hypothetical-protein
MARNGAEWVAGYLAAWESNDPEQVGALFADDARYLTSPDAEPRIGRDAIVAGWLEDIDDPGTWAFDWHILHEHDGFVVVQGRTDYRAEQNYLNLWIVRLADDGRAAEFTEWYMPRPHEG
>CP028913.1|AWB96039.1|2224545_2225040_+|hypothetical-protein
MSEALEGWTEFNVAMVGATAALAGLLIVAMSVNISTIMTSKTLPPRAASSIATLVLAIVAGALGLVPGQPVWAYGAVVLIASLVATAFQVHAMRVIAREPGSGAGDRALKSIAGVLPVAVFLLGAVLIVAGAAGAGLILVAVGSVLAIVSAILMAWIVLVEVLR
>CP028913.1|AWB96038.1|2223144_2224419_-|aspartate-kinase
MSLIVQKFGGSSVADAESIKRVAKRIVETRKAGNDVVVAVSAMGDSTDELLDLANEVTPIPAPRELDMLLSAGERISMALLAMAIKGMGHEARSFTGSQAGMITDATHGAARIVDVTPVRLREALDDGAIVIVAGFQGFNRDTRDITTLGRGGSDTTAVALAAALQADVCEIYTDVDGVFTADPRVVKKARKLDRITSEEMLELASSGAKVLHIRAVEYARRHGVTLHVRSSFNNSEGTIVYDPARLPEGEAVEESVIAGVAVDLSEAKITVVGVPDKPGVAAKIFKIVAGANANVDMIVQNVSAASTGRTDISFTLPKSDGERALTALAGSQEAVGFLSLQYDDQIGKLSLVGAAMRSATGVSARLFEALYDAGINIEMISTSEIRISVVTRADSVHAAARAVHSAFELDGDDDAIVHAGTGR
>CP028913.1|AWB96037.1|2221924_2223034_-|aspartate-semialdehyde-dehydrogenase
MEQRFPTAERPRGDGGVHVGNGVNIGIVGATGQVGAVVRKLLEERDFPVASIRYFASARSAGSTLPWRGDDVVIEDASTADPSGLDIAIFSAGATLSKAQAPRFAAAGVTVIDNSSGWRMDPEVPLVVSEVNPHAIDEAVKGIIANPNCTTMAAMPVLKVLHDEAGLERLMISTYQAVSGAGLAGGEELLEQARAAVAQDAIGLVHDGASVVFPEPVKFPRPIAFDVIPLAGSIVDDGDNETDEEKKLRNESRKILELPGLRVAGTCVRVPVFTGHSLSIHAEFANPITPERATELLAAAPGVELSDVPTPLQAAGADPSFVGRIRQDQSAPDGTGLVLFVSNDNLRKGAALNAVQIAELVAAKLPAAV
>CP028913.1|AWB96926.1|2234802_2235042_-|hypothetical-protein
MRRSPRRRAHRRPDPSWAHPRIGLACGRHRARCVRQRRAPASCRGCSPGRAARAAPRRRPVRRPSRPRRRIRVRRCRTC
>CP028913.1|AWB96046.1|2235114_2235765_-|GNAT-family-N-acetyltransferase
MREDGRVPEIRQYRAADRDQLAHICLLTAAAGGDASGVYSDDSLMPEVFALPYVEYAPELAFVVAEGDRVLGYVIGVADTAAFVEWWKREWSPGFAARHPSPGAPTGHEPRFTEARLVEAGTSPERMLIDELAEYPAHLHIDLLPELQGQGFGRRLIGTMRAALAARGVPAVHLGIDASNAGARVFYDRLGFHELPSSRPRSPLLGIATGDTALSG
>CP028913.1|AWB96047.1|2235776_2237666_-|DUF853-domain-containing-protein
MADDAVKQAQEAAAAAAEAAKALQAQAAEAIKKAEEAAALAQAAAEAAATDAAAAARAATTDAAAGPEQPAAPSAPGPAASAGPLDQSRIDAIRAGYAFEGAALEMGALVNGEALPEVPIRIPLAMTNRHGLVAGATGTGKTRTLQLLAERLSANGVAVFAADIKGDLSGVATPGEGNEKLLERTAGIGQDWTPASFPTEFYSLGGVGRGVPIRATISGFGPLLLSKALGLNETQESSLGLVFHYANTNNLALLDLEDLRAVLAYLVSDEGKPELEGLGGLSKATVGVILRELITFADQGADVFFGEPEIDTAEFLRVASDGRGVISLLEVPGVADKPALYSTFLMWLLADLFTDLPEVGDLDQPKLVFFFDEAHLLFTDASRDFLAQITQTVRLIRSKGVGVFFVTQTPKDVPADVLAQLGSRVQHQLRAFTPDDAKALRATVSTYPKSGYDLEETLTMLGTGEAIVTVMNEKGAPSPVAWTRLRAPQASMSPSTDASIDAAVAASPLLAKYGTGIDRESAHEILTKKLADAAARVDAEEAAAAKSKADAEYAKMQAKIAADAAKADKKAQAEYDRLMKQTSGSSRSRSSRSSRSKEKSALEQVLGSKATQNVLTSVITGIFGMAKRR
>CP028913.1|AWB96048.1|2237748_2239008_+|DNA-polymerase-domain-containing-protein
MRRPRVENVSPKASTAEVLLIGDREVRISSPDKVVFPEPGLTKLDVVTYYLAVADGALRGAGGRPMVLKRFVKGIDQEAFFQKRAPENRPEWIETATLHYASGNSADEVVVRDPAALAWVVNLGCLDLNPHPVRAEDLDHPDELRVDLDPMPGVDWSQIVDVAMVAREVLADHGLVGWPKTSGSRGMHICVRIEPRWNFRDVRLAAETLAREVENRAPGLATARWWKEERGESVFVDFNQNAKDRTVASAYSIRPLPDARVSTPLDWNEVRGSHPEHFTVATVLERFAERGDPAAGIDETAGGLDALLELAERLGPAEKPPKSSDGSGRRTSTMPLIEIARANTKAEALEGLERWKARHPDVVALLHPADTLVDGMRGSSSLWYRIRVNLQHVPEARRPEQEPLEVDYDPWAGKEWARP
>CP028913.1|AWB96927.1|2239022_2239859_+|3'-kinase
MDPGHAGELAWLRRWRLRPVGDAVTTASSTLIPVQTMSGEPAMLKLAHAPEEVRGADLLVALDGHGAARVLERSGAAILLERATGARDLVRMVADGRDDDATRTICAAAGRIHVAPGAVLEREDPPELIDLPTWFRELFANADRIGALHRRGADLAEQLLDDPREPVVLHGDLHHGNVLDFGERGWLAIDPKGLTGEAAFDYCNVLCNPSHERALRPGRLERQFGVVVDATGVERARLARWLVAWCALSSTWFAIDDDPGHAESAAEIGERALTLLDE
>CP028913.1|AWB96049.1|2239989_2241174_-|o-succinylbenzoate-synthase
MTTTTRTPRIEAIELHRVEVPLVRPFETSFGRETVREALLVRVRTDTGDGWGECVAGRDPFYSAEYVGGAASVIERYLAPALLDAREIRAVAGDDPRSVGVPLAASVAPALAVVAGHRMAKGAIEAAVLDAELRAQGRPMGEAFGAVRGWVDCGVSVGIASTIEELLDEVAGYAEAGYRRIKLKIKPGWDLVPVGAVRELIGPDALLQVDANTAYTADDIPLLASLDAFGLLLIEQPFAEEDLAAHARLASACETPVCLDESILDVTTAVDAIERGATSVVNIKPGRMGGYLEALRVHDVCRALDVPVWCGGMLETGIGRAANVALAALPGFVLPGDTSASSRYYAEDLTEPFELGEGEHRGQLQVPDAPGTGVTVREELLREWASAAPIILAR
>CP028913.1|AWB96050.1|2242012_2243287_-|ATP-binding-protein
MRILLIGAGGVGDAIAKIAARRDFFELLVIADYDEARAERTLAWIRAKHGDEVASRFDTTQIDASDPYVVTAVALEFDATHVMNAVEPKFVPSIFAGALAAGADYLDMAMSLSEPHPSEPHSLTGVKLGDDQFAQAGDWDAAGRLALVGMGVEPGLSDVFARYAADHLFSEIDELGVRDGANLVVTDEEGNEIFAPSFSIWTTIEECLNPPVVWEKDAGWFTTAPFSEPETFVFPEGIGPVECVNVEHEEVLLMPRWVDAKRVTFKYGLGAEFINVLQVLHLLGLDSTSPVTVRSETGPAHVAPRDVVAASLPDPATIGPRMTGKTCAGLWVTGTGVDGEPREVYLFHVSDNEWTMREYESQCVVWQTALNPVIALELLATEVWQGRGVLGPEAFDAAPFLELMARPVAEGGYGQAWGIEDRLG
>CP028913.1|AWB96051.1|2243352_2244318_-|urate-oxidase
MTEPAIVLGPNQYGKAEVRVVKVTRETARHEIEDLNVTSQLRGDFDRAHLAGDNSHVIATDTQKNTVFAFARGGIGSPEAFLLRLAEHFTSEFDWVSGGRWEAESFAWDRIEVQGAAHDHSFVRSGRETRTAVVVADGAARHVIGGLKGLTVLKTTESGFEGFPRDQYTTLAETSDRVLATDVAARWLYARREGEGEGEGEGEGEGEGEGDGDGGPDYDASYERVRALLLEAFAQRHSPALQATLFEMGSRVLEECPEIAEIRFSMPNKHHFVVDLTPFGLDNPNEVFYAADRPYGLIEAAVTREGVVSPAAAWEGIAGFC
>CP028913.1|AWB96052.1|2244321_2244678_-|hydroxyisourate-hydrolase
MTASRATASRITTHVLDTSTGLPAEGIAVELFVRDGADWRSVATSVTDADGRIMQLGAETIAPGEYRLRFDTRAYFAARDLDAFFPEVLLTFALADDGRHCHVPLLLGPFAYSSYRGS
>CP028913.1|AWB96053.1|2244674_2246555_-|allantoinase
MTDASGFDLVVTGAEVLVAGGFAPAELGVRGGVIARIAPLGAGLVGERRIDLADDEVLIPGLVDTHVHVNEPGRTEWEGFASATRAAAAGGVTTIVDMPLNSIPPTTNVAALELKRQAAAGQAFVDVGFWGGIVPGNRAELEPLVAAGVFGFKCFLAHSGVDEFPPVSADEMEAAMSVLAAESDSLVIVHAEDAALLEAAPHAHSTAYADFLASRPREAEGAAIGAVIERAARTGVRAHILHLSSADALDQIATAKHRGVRLTVETCPHYLVLAADEVPAGATEFKCCPPIREGVNRDALWQGLVDGVIDFIVSDHSPAPPELKRAGGGDFAEAWGGIASLQLGLPLVWTEARRRGIPLARVVEWMSTAPARRVGLAAKGGIVEGAAADLVVVAPDASCVVDAALLEHRHPMTPYDGRELFGVVRAVLLAGAPIERENPRGRLLRRDTSEPGRVTSEPGRVMRLAEFDAADRDAAIAWIRPCLDITRWCEELVDGRPYGSVEELVTAAGTAASPFTAEEVDAAMARHPRIGEHAAGVGAEAALSRSEQAGVDAGDAAIAAALAEGNFAYERRFGRVFLIRAAGRSSEEILGALTERLGHTADEEDLVVAGQLREIAALRLKGRFAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP028913_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP028913_5

2386231-2386335

Orphan

Consensus_repeat	Method
TGGACCGCGCCGCGCAGGACGACTGGTACGGGGCGACGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP028913_5

>merge|CP028913|5|2386231-2386335|CRISPRCasFinder
TGGACCGCGCCGCGCAGGACGACTGGTACGGGGCGACGACCTCGATCACGACTGCGCCGCTCAGGTGGACCGCGCCGCTCAGGACGACTGGTACGGGGCGACGAC

>CP028913|5|5|2386231-2386335|CRISPRCasFinder
TGGACCGCGCCGCGCAGGACGACTGGTACGGGGCGACGAC	CTCGATCACGACTGCGCCGCTCAGG
TGGACCGCGCCGCTCAGGACGACTGGTACGGGGCGACGAC

Protein	Signature genes	Signature genes Name	Protein_function
CP028913.1\|AWB96148.1\|2374470_2375634_-\|glycosyltransferase-family-1-protein	unknown	unknown	gnl\|CDD\|340837
CP028913.1\|AWB96161.1\|2394613_2395528_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223488
CP028913.1\|AWB96151.1\|2377930_2379103_-\|pyridoxal-5'-phosphate-dependent-protein	unknown	unknown	gnl\|CDD\|275034
CP028913.1\|AWB96152.1\|2379059_2380934_-\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|224011
CP028913.1\|AWB96163.1\|2396558_2397848_-\|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380569
CP028913.1\|AWB96159.1\|2390573_2392076_-\|IMP-dehydrogenase	unknown	unknown	gnl\|CDD\|376340
CP028913.1\|AWB96951.1\|2393643_2394624_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119323
CP028913.1\|AWB96165.1\|2399244_2399541_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
CP028913.1\|AWB96157.1\|2387490_2389191_-\|ABC-transporter	unknown	unknown	gnl\|CDD\|223562
CP028913.1\|AWB96162.1\|2395514_2396282_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213191
CP028913.1\|AWB96158.1\|2389319_2390471_+\|aspartate-aminotransferase	unknown	unknown	gnl\|CDD\|224090
CP028913.1\|AWB96164.1\|2398113_2399016_-\|EamA-family-transporter-RarD	unknown	unknown	gnl\|CDD\|225510
CP028913.1\|AWB96155.1\|2382687_2384115_-\|chromosome-partitioning-protein	unknown	unknown	gnl\|CDD\|349772
CP028913.1\|AWB96154.1\|2382049_2382691_-\|low-molecular-weight-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|319972
CP028913.1\|AWB96949.1\|2376575_2377286_-\|acetyltransferase	unknown	unknown	gnl\|CDD\|274656
CP028913.1\|AWB96950.1\|2384405_2386118_-\|glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|223651
CP028913.1\|AWB96149.1\|2375633_2376572_-\|GDP-mannose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|187566
CP028913.1\|AWB96153.1\|2381096_2381969_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273167
CP028913.1\|AWB96160.1\|2392209_2393628_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119324
CP028913.1\|AWB96150.1\|2377295_2377934_-\|UDP-galactose-phosphate-transferase	unknown	unknown	gnl\|CDD\|376775

Protein	Function_ID	Function_description	E-value
CP028913.1\|AWB96148.1\|2374470_2375634_-\|glycosyltransferase-family-1-protein	gnl\|CDD\|340837	cd03808, GT4_CapM-like, capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. CapM in Staphylococcus aureus is required for the synthesis of type 1 capsular polysaccharides.	2.38311e-92
CP028913.1\|AWB96161.1\|2394613_2395528_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223488	COG0411, LivG, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	7.46663e-101
CP028913.1\|AWB96151.1\|2377930_2379103_-\|pyridoxal-5'-phosphate-dependent-protein	gnl\|CDD\|275034	TIGR04181, DegT/DnrJ/EryC1/StrS_aminotransferase, aminotransferase, LLPSF_NHT_00031 family. This clade of aminotransferases is a member of the pfam01041 (DegT/DnrJ/EryC1/StrS) superfamily. The family is named after the instance in Leptospira interrogans serovar Lai, str. 56601, where it is the 31st gene in the 91-gene lipopolysaccharide biosynthesis locus. Members of this family are generally found within a subcluster of seven or more genes including an epimerase/dehydratase, four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD) and a nucleotidyl transferase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analogous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar.	4.51249e-138
CP028913.1\|AWB96152.1\|2379059_2380934_-\|polysaccharide-biosynthesis-protein	gnl\|CDD\|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
CP028913.1\|AWB96163.1\|2396558_2397848_-\|amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380569	cd06346, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems that are predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); however, its ligand specificity has not been determined experimentally.	1.67767e-82
CP028913.1\|AWB96159.1\|2390573_2392076_-\|IMP-dehydrogenase	gnl\|CDD\|376340	pfam00478, IMPDH, IMP dehydrogenase / GMP reductase domain. This family is involved in biosynthesis of guanosine nucleotide. Members of this family contain a TIM barrel structure. In the inosine monophosphate dehydrogenases 2 CBS domains pfam00571 are inserted in the TIM barrel. This family is a member of the common phosphate binding site TIM barrel family.	0
CP028913.1\|AWB96951.1\|2393643_2394624_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119323	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	3.66431e-61
CP028913.1\|AWB96165.1\|2399244_2399541_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	1.03326e-49
CP028913.1\|AWB96157.1\|2387490_2389191_-\|ABC-transporter	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	2.04424e-95
CP028913.1\|AWB96162.1\|2395514_2396282_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213191	cd03224, ABC_TM1139_LivF_branched, ATP-binding cassette domain of branched-chain amino acid transporter. LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.	5.67202e-97
CP028913.1\|AWB96158.1\|2389319_2390471_+\|aspartate-aminotransferase	gnl\|CDD\|224090	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].	1.98319e-118
CP028913.1\|AWB96164.1\|2398113_2399016_-\|EamA-family-transporter-RarD	gnl\|CDD\|225510	COG2962, RarD, Predicted permeases [General function prediction only].	1.87505e-81
CP028913.1\|AWB96155.1\|2382687_2384115_-\|chromosome-partitioning-protein	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	4.65105e-67
CP028913.1\|AWB96154.1\|2382049_2382691_-\|low-molecular-weight-phosphatase-family-protein	gnl\|CDD\|319972	cd16344, LMWPAP, low molecular weight protein arginine phosphatase. Low molecular weight protein arginine phosphatases are part of the low molecular weight phosphatase (LMWP) family. They share a highly conserved active site motif (V/I)CXGNTCRS. It has been shown that the conserved threonine, which in many LMWPTPs is an isoleucine, confers specificity to phosphoarginine over phosphotyrosine.	2.72981e-34
CP028913.1\|AWB96949.1\|2376575_2377286_-\|acetyltransferase	gnl\|CDD\|274656	TIGR03570, NeuD_NnaD, sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. This family of proteins includes the characterized NeuD sialic acid O-acetyltransferase enzymes from E. coli and Streptococcus agalactiae (group B strep). These two are quite closely related to one another, so extension of this annotation to other members of the family in unsupported without additional independent evidence. The neuD gene is often observed in close proximity to the neuABC genes for the biosynthesis of CMP-N-acetylneuraminic acid (CMP-sialic acid), and NeuD sequences from these organisms were used to construct the seed for this model. Nevertheless, there are numerous instances of sequences identified by this model which are observed in a different genomic context (although almost universally in exopolysaccharide biosynthesis-related loci), as well as in genomes for which the biosynthesis of sialic acid (SA) is undemonstrated. Even in the cases where the association with SA biosynthesis is strong, it is unclear in the literature whether the biological substrate is SA iteself, CMP-SA, or a polymer containing SA. Similarly, it is unclear to what extent the enzyme has a preference for acetylation at the 7, 8 or 9 positions. In the absence of evidence of association with SA, members of this family may be involved with the acetylation of differring sugar substrates, or possibly the delivery of alternative acyl groups. The closest related sequences to this family (and those used to root the phylogenetic tree constructed to create this model) are believed to be succinyltransferases involved in lysine biosynthesis. These proteins contain repeats of the bacterial transferase hexapeptide (pfam00132), although often these do not register above the trusted cutoff.	7.71179e-58
CP028913.1\|AWB96950.1\|2384405_2386118_-\|glycerol-3-phosphate-dehydrogenase	gnl\|CDD\|223651	COG0578, GlpA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion].	2.59229e-164
CP028913.1\|AWB96149.1\|2375633_2376572_-\|GDP-mannose-4,6-dehydratase	gnl\|CDD\|187566	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs. This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	4.14147e-100
CP028913.1\|AWB96153.1\|2381096_2381969_-\|hypothetical-protein	gnl\|CDD\|273167	TIGR00601, UV_excision_repair_protein_RAD23_homolog_A, UV excision repair protein Rad23. All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	0.000371696
CP028913.1\|AWB96160.1\|2392209_2393628_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119324	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins. LivH is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivH forms a heterodimer with another TM, LivM, to generate the transmembrane pore. LivM is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	9.74024e-73
CP028913.1\|AWB96150.1\|2377295_2377934_-\|UDP-galactose-phosphate-transferase	gnl\|CDD\|376775	pfam02397, Bac_transf, Bacterial sugar transferase. This Pfam family represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways.	1.85474e-87

>CP028913.1|AWB96950.1|2384405_2386118_-|glycerol-3-phosphate-dehydrogenase
MTRSTKLGPEEREAAIARLKEKELDILVVGGGIVGTGAALDAVTRGLSTGLLEARDWASGTSSRSSKLVHGGIRYLEQLDFRLVREALIERGLLLQRIAPHLVKPVRFLYPLKTRIFERFYVGAGMMLYDIFSYTGGRPPGVPHHRHLSKRQVMRAIPSLSNDALVGGLTYYDAQVDDARYVASLARTASFYGAHVASRVKVEGFVKVGERVVGVKAHDLQTGEHFEIRAKQVVNATGVWTDDTQRMVGERGTFKVRASKGIHLVVPRDRIQSAMGMIFRTEKSVLFVIPWGRHWLIGTTDTDWNLDKAHPAATAADIDYLLEHVNGVLGIPLTREDVEGVYAGLRPLLAGESDQTSKLSREHIVAHTVPGLVVVAGGKWTTYRVMAKDAIDAAADALDGKVPKSTTQDIPLLGAEGYQAAWNKRGKIARAFGVHEVRIEHLLNRYGTMTDELLDLIREDASLGEPLPGADDYLGAEVVYAASHEGALHLDDVLARRTRISIEAWDRGVSAAPVAARLMGGVLGWDAARQSLEVERYLERVAAERASQEQPDDESADRARLEAPDIVKVD
>CP028913.1|AWB96155.1|2382687_2384115_-|chromosome-partitioning-protein
MELRDYVRILHKSWLLILACLLTGIGLAAVYSILVAPKYVATTELYVSVRAGDTAVTGDLVQGTTFARQAVTSYVDVVDSAIVLDRVIEDLELDTSTAALSGQIVASSPVNSVLIDITVTDHDPGLAAEIANSTGRNFADIVVNDLEKPEGGGASLVKIETIQPATVPSAPSSPNVPLNLVLGALIGLAVGIGIAVLRSVLDTRIHSLHDIGQITDKPMLGGIALDPDAKKRPLIVHADPRNPRTESFRSLRTNLQFVNLDGGPRSFVIASAGPGEGKSTTTANLAISLAETGAKVALIDGDLRLPKIADYMGIEGGVGLTDVLIGRAELVDVLQKWSRNHLYVLPAGRIPPNPSELLGSAAMARVLETLTSQFDYVLIDSPPLLLVTDAAVVSKLTSGAILVAASGSTKKQELAGAVRALDAIGSRLLGIIVTMLPTKGPGSYGYGTYTYGMSHDLEGTFDVDATRERPRGARS
>CP028913.1|AWB96154.1|2382049_2382691_-|low-molecular-weight-phosphatase-family-protein
MSFRILTVCTGNICRSPLAEQLLRRELAGIEGVTVASAGTVALVGHGMTPEAQTISTRLGATDASAHVARLLTEQFIAESDLVLGLAREHRRAVVELVPAATRHTFTLREFGRLAASVTDADLDASVSPFAGPVEAGLSSAARIASNLKIAVQAAASLRGVVEPLESPDDADVIDPYGQPVAVYEESTAQLVPALQATVSLLARAAQLTQAHR
>CP028913.1|AWB96153.1|2381096_2381969_-|hypothetical-protein
MLALTFVALTQNRSVPGAGTTPGSSPSATPEATRSEPPSATPAPVARPLAVPGRLIAAIDASSAVRAGATACPEPTTIEVTSDGGATWETAEPAPVSEVQRVAAGDDAFVDLIGLGVEGCAPAYERSFTSGDAWQPVPEELDASWFVDPSNRAGVHAPAGDLSAPCGVVVQLAVIDANAAAVLCEDGSVHATSDAGASWRSAAPVVGAAAIGTNGTAYRVAVVDQNGCVGAQLVELTAGDAGLVPGAAGACLAATVGAGEVAVDSVVGGATWLWAGDALGRSEDGGVSWL
>CP028913.1|AWB96152.1|2379059_2380934_-|polysaccharide-biosynthesis-protein
MAKTDSPERILERGFRAARPVRLSTQFGLDAGAWALAIVLAEVFRYEFDLSQVAVVPMLLLIASAVVLQLAIGWTFHLYRGRFTYGTFEEVRALSAAVVVVAVVLCVPTVLFGTSLSIPRSTILIALPIGLLFMCAARYMKRLYVERRVRPGLDAQRVLVYGAGYLGATLIRRMMTDPDSPYLPVALIDDQPAYRNVRHSGVAVRGTLSDLERIASETDASAIVVAIASADASFLRRVNDEGERLGLHVKVLPRLDEILSGEKQPSDLRDISIEDLIGRHPVDTDVGSIAGYLAGKRVLVTGAGGSIGSELCRQIVQYGPAELIMLDRDETGLQMAQLGTAGHGLLDTRDVVLADIRDVPALQAVFEERRPEVVFHAAALKHLPMLEQYPDEAWKTNVMGTLNVLNAAREVGVDTFVNISTDKAANPTSVLGHSKRVAEKLTAWMATETGLRYLSVRFGNVIGSRGSMLPTFSALIKAGGPITVTHPEVTRFFMTIPEACQLVVQAGGIGKPAEVLILDMGEPVRILDVAERMIEMSGKDIEIVFTGLREGEKLHEELVGASESTDRPLHPKISHARVNSISPERLDKAGWEARIRSARRTNEAAVLGLGDGALVRNAEDSQRD
>CP028913.1|AWB96151.1|2377930_2379103_-|pyridoxal-5'-phosphate-dependent-protein
MGPSSATQRIRSVTERIYMSSPDVGVLEEQFVVDALRSGWVAPLGPHVDAFEAEVASRAGVGHAVALSSGTAALHLGLVTLGVGSGDIVLTSTMTFVATANAIMYTGAEPYFVDCDPVTGEMDPALLAQALAELSAAGEHVAAIVPVDLLGKCVDYTSIERIATEYGVPLLADAAESLGANHRGRAAGSFGRASILSFNGNKIMTTSGGGMLLTDDEAFASQVRYLSTQARQPAVHYEHTEIGFNYRMSNLLAALGRAQLSRLDEMIARRRLHRERYKALFADVPGVEIFGAADDQHDNFWLTAIVVDPTVAGWEPSDLGDWLGEEAIESRPLWKPMHMQPVFADHRAALNGSSEALFRTGLTLPSGSALTPDQVRRVDERIGKFLEARR
>CP028913.1|AWB96150.1|2377295_2377934_-|UDP-galactose-phosphate-transferase
MSATRPYDRIKRVIDAVGAGAGLVVLSPLLLAISIAVACKMGRPVLFVQERPGRDGRPFRLIKFRSMLDADHRNGIHSDADRLTDFGRTLRSTSLDELPELWNVLRGEMSFVGPRPLLMSYLGRYSPEQARRHEVRPGITGLAQVSGRNAVGWDDRFELDVEYVDRRSLMLDAHILWRTIHSVLRRDGVAAEGHVTMPEFGGSTQTPSGHGG
>CP028913.1|AWB96949.1|2376575_2377286_-|acetyltransferase
MLHVVVVGAGGFGREVLDVLEALNEGSPAARYVVDGVIDDSPSELNLSRLADRGYRYLGSLDEYLARGGAARYVIGIGAPQIRARVVMKIGDRLSPIDPIVHPKANFGSRVTLGAGSVVCAGVSMTTNISSGDHVHVNPNVSVGHDSMLGDYVSLNPGCAISGDVVIGDRVLVGTTAAILQGLTIGADAVVGAVACVTRDVAVGQTVIGVPARPQQPAAAPVPEPQSTSQTPDRRR
>CP028913.1|AWB96149.1|2375633_2376572_-|GDP-mannose-4,6-dehydratase
MRVLITGGAGFIGSNLARYFALHDPSVDIRVIDDLSTGRMTNLDGLDVDIRVASVADADAMRSAVEDVDAIVHLGALGSVPRSINDPMASHVANLTGTLTVLEAARSVGAYVVFASSSSVYGANLKLPKSEFDWTRPMSPYAVTKLGAEGYTLAYQFAYGLETLAFRFFNVYGPLQPADHAYAAVIPRFVDAALDGRPLVVHGDGLQSRDFTHVESVCAALFTASVDRIVAPDPVNLAFGTNTTLLELIEVLEAELGFKVAVEHTESRVGDVRASQADGLRIREYFPQIAPVPLAAGVATTVDWFKRQRGQA
>CP028913.1|AWB96148.1|2374470_2375634_-|glycosyltransferase-family-1-protein
MTGDRRVVVLGVTADVSLSLMRGFPEYLSAHGWKVHVVSSTGPRLTELGTSGEVTTHALKMAREPAPFADASSLVSWVRLLRRIRPDVVMVGTPKAGLLGLVAAVLTRVPVRVYHVRGLRLETTRGLARRVYTLLERIAFATSTTAIAVSSSLRDRLIDLRLAQGDQVVVLGRGSSNGVDTKRFRPADPSALRDAGAERARIGLAGVPTVGFVGRLTRDKGLEVLAEACKRLADDGVDHQLLVIGDVEEAESRLVLDQLGAGGYPPVVLGHVPDTAPYYALMDVLCLPTFREGFPNVVLEASASGVPVVTTDATGAVDSVVDDVTGSIARVGDPVSLAAELARLLTNPERAKAMGQAGRELVVASYARDVVWMQTESFLRNLRARRA
>CP028913.1|AWB96157.1|2387490_2389191_-|ABC-transporter
MGFIDVNGVSFSLPDGRPLLADLAFRVTDGATTALIGANGAGKSTLLRIVRGELRPDEGSVQLDGGLGVMDQFVGTGQTVEGAAETVAGLLISVAPTRVRAAAIELEASENALIELDDTAAQMRYATALAEYAEAGGYEQEVVWDHCTIAALGIPFERAKWRELATLSGGEQKRLALEALFRGPEQVLLLDEPDNSLDVPGKRWLESQLRATPKTVLLVSHDRELLARAADRIVTIELGAAGNTAWVHGGSFEGYHRAREERFERLDELRRRWDEQHAALKTLVATLKVKATYNDGMASRYQAAVTRLRKFEEAGPPEERPPAQAVSMRLRGSRTGKRAVVGERLELTGLMKPFDLEVWYGDRVAVLGSNGSGKSHFLRLLAGGGTEPDRTLGHITTVGESLARVPHTGRAVLGARVVPGWSAQNHEHPEYRGRTLLDILHRGDANRDGMAREAASSALDRYGLAASAQQAFESLSGGQQARLQILLLELSGATLLLLDEPTDNLDLVSAEALEEGLSRFDGTVLAVTHDRWFARGFDRFLVFGGEGEVYESDAPVWDEARVARAR
>CP028913.1|AWB96158.1|2389319_2390471_+|aspartate-aminotransferase
MQRITAEPIDALRARTSAKWRAYPADVLPLPIAEMDYPLAEPIAAALRAAIERSDTGYSSGSRQVAEAFQGFAAARLGWEVDPARVTCTADVSLGIVEVLRRVTAPGDGVVITPPIYPPFFDLVTEASTRVVDVPMLGGIDEGWSLDLDGIDAAFAAGARAMVLCNPHNPIGLVPDAAQLAALAEIAARHDVTIVSDEVHGPLVQPGVDYSPFLTVSDAAREHGVAVTAASKAFNIPGLKAALILTASDRGDGVRAALPYEVEWRMSQFGSIASVAAFRDGGPWLDGVLASLDDNRRLLAELLADELPGVRYRVPDATYVAWLDLTALGWGDDPAAYALEHAKVALANGPAFGASVGRGHARLNFACTPEVLAEAITRLADAQ
>CP028913.1|AWB96159.1|2390573_2392076_-|IMP-dehydrogenase
MDQADPFGLTGLTYDDVLLLPGHTDVIPSEADTTSRLTRRISVATPLLSAAMDTVTEARMAIAMARQGGIGILHRNLSIADQADMVDLVKRSESGMVSNPVTTTPEASVADVDALCATYRVSGLPVVDTDGKLVGIISNRDMRFVSDFEKPTTRVSEVMTEMPLITGRVGMNPDEALAIFAKHKIEKLPLIDEDGRLTGLITVKDFDKSEQYPNATKDLEGRLRVGAAMGFFGDAWERAEALRDAGVDVLVVDTANGESAGVLDIIRRLKSDPTFAHIDVIGGNVATREGAQALVDAGADAVKVGVGPGSICTTRVVAGVGVPQITAVYEASKATKPAGVPLIADGGLQYSGDIAKALVAGADTVMLGSLLAGTAESPGELVFQNGKQFKAYRGMGSLGALQTRGQKTSYSKDRYFQADVPSDDKLIPEGIEGQVPYRGPLSAVAYQLIGGLRQSMFYVGARTIAELKTKGRFVRITPAGLKESHPHDVQIVVEAPNYTR
>CP028913.1|AWB96160.1|2392209_2393628_+|branched-chain-amino-acid-ABC-transporter-permease
MRHNRHVLSTKLSTGQDRTQTAISLTGALGGAVKPTRTLAHRSPGRWLVLLGILASALTLSGIAASPAMAEDGSTAQASEEFEYFFTGNVQFDREPLEGVKITVEGGGFEADAETDAEGKWRIGVPEKGEYEVTLDEDTLPEGVVVAKGEATITAEFALTKLKAVNFFLGEGERTTTNFAAQLLERVINGLNFGLLLALAAIGLSLIFGTTGLSNFAHAEMVTFGALMVLSFGVDLAWPIWLAIAVALVLSAALGWSLDAIIWKPLRKRGVGLIPLMIVSIGLSLAIRYTYQFFYGGATRQLPGATAPKELSFGGVQLSWIDVGSMIVSVVVLLAVAFFLLRTRIGKATRAVSDNASLASASGIDVDRVIRIVWVLGAALAGLSGILWAYFRPGVSWDMGFQILLLIFAAVTLGGLGTAFGALVGSLIVGLFIEISTLWLPSDLKYVGALVVLILVLLFRPQGILGRRERIG
>CP028913.1|AWB96951.1|2393643_2394624_+|branched-chain-amino-acid-ABC-transporter-permease
MDWIQIFSNAAQELISPTTAAYALAALGLAIHFGYTGLLNFGQAGFMALGAYGYAISVLSFGLPVWAAVLVGIGASVVFALILGIPTLRLRADYLAIVTIAAAEILRLIFTTNTFEAVTGSAQGLNGYKGSFAALNPIPKGTYGFGPFQYNEYDWWLRIVGWTVVVLLALLTWLIMRSPWGRVIKGIREDEDAVRALGKNVYSYKMQSLILGGVYGTLAGMIFVLPRAVVPANYQTSLTFFVYAILLLGGAATILGPIIGSMIFWVLLSFFSGFISRAVEAGWLPFMTQVQAGQLRFILVGVAIMLIVIFRPQGIFGNKKELAFVK
>CP028913.1|AWB96161.1|2394613_2395528_+|ABC-transporter-ATP-binding-protein
MSSDVTPTSKPVKTTGLHVGAAEPGCRKVDPILIADGVTRTFGGLKAVDVEHVEIPRGAITALIGPNGAGKTTFFNLLTGFDKPDSGTWEFEGRSLAHVPAYRVARMGLIRTFQLTKALGLLTVLDNMKLGAKGQSGENLFRSVLPFLWRKQEEEIEAKAVELLTRFKLDAKQTDYAASLSGGQRKLLEMARALMSDPTLVMLDEPMAGVNPALTQSLLDHILDLKSQGMTVLFVEHDMHMVRHIADWVVVMAEGRIVAEGDPHTVMEDQAVIDAYLGAHHDADLGATDTEHVEVLKELIDDEQ
>CP028913.1|AWB96162.1|2395514_2396282_+|ABC-transporter-ATP-binding-protein
MTNSNPAPGAVLEPVGDMVVEVDTVTAGYLPGVNILNACSLQARQGELIGIIGPNGAGKSTLLKAIFGLVKVREGTIRLNGEEITNLKANKLVAKGVGFVPQTNNVFPSLTIQENLEMGLFQKPKGLKERLEFVTEIFPELGKRLGQRAGSLSGGERQMVAMSRALMMGPHVMLLDEPSAGLSPVRQDEAFLRVKEINRAGVTTIMVEQNARRCLQICDRGYVLDQGRDAYTGTGRDLLNDPKVIGLYLGTLGQD
>CP028913.1|AWB96163.1|2396558_2397848_-|amino-acid-ABC-transporter-substrate-binding-protein
MSVFAKATAKRSARAAWTGLAIAGVSTLLLSACASGGTPSAETEEPADTGDALPIEAGERDLDLKIGTILPQSGTLAFLGPPEEAGVALGAEEVNEADAGMSLEVIFRDSGDTTTDIATVSVTDLLSQDVSAIVGAASSGVSFTVIDQISSAGVVQFSPANTSPDFTEYEDAGLYFRTAPSDLLQGEVLGTQIADDGNSTLGLLVLNDPYGTGLAAATKEAFEAAGGEVVAEELFNTGDSNFDAQLSAISAANPDAVAVITFDEAKVVVPALVGSGYPGEQLYFVDGNLSDYSADFAEGLIAGSKGTLPGPKLEDDFRDRLLAIDPDLADFSYGPESYDATVLIALAAYAANSTEGADIAKYLRQVSGGSGDGEKVTTFADGAKLLAEGKQIDFDGASGPITLDEHGDPTEATIGVYEYGDDNKYTRIN
>CP028913.1|AWB96164.1|2398113_2399016_-|EamA-family-transporter-RarD
MSRSGLLFAIGAYGLWGFLPVYFIALAPSGPFEIVGWRVLFSLVFCALLITVTRALRPLAVLLRDRRIVLTMGLAGLLIFINWQTYVYAALSNQVVEAALGYFINPIVTVFLGVLVLRERLNLTQWIAVGISIVAVVVLAVGYGQLPWIALVLAFSFGFYGLIKKRVGPKVDAVSGLTIETVWLAPLAVVQLVFVSMTTGLTIGTVSVWHTVLLLLAGAITAVPLLLFAAASRRLPLIFMGFIQYFAPFIQFLVGVFVLKEPMPPERWIGFALVWVALIVLTVDLLRGVRASRRVVAEPA
>CP028913.1|AWB96165.1|2399244_2399541_-|co-chaperone-GroES
MSVSIKPLEDRIVIKQVEAEQTTASGLVIPDTAKEKPQEGEVVAVGPGRIDDNGNRVPLDVAVGDKVIYSKYGGTEVKFGGDDLLVLSARDVLAVVVR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP028913_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP028913_6

2888342-2888427

Orphan

Consensus_repeat	Method
CTAGTTGCCGCCCTCGGTGAGTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP028913_6

>merge|CP028913|6|2888342-2888427|CRISPRCasFinder
CTAGTTGCCGCCCTCGGTGAGTTCGACGCTCTGTCTGGCGCTTCTCGAAGGGCGACGCATGACTAGTTGCCGCCCTCGGTGAGTTC

>CP028913|6|6|2888342-2888427|CRISPRCasFinder
CTAGTTGCCGCCCTCGGTGAGTTC	GACGCTCTGTCTGGCGCTTCTCGAAGGGCGACGCATGA
CTAGTTGCCGCCCTCGGTGAGTTC

Protein	Signature genes	Signature genes Name	Protein_function
CP028913.1\|AWB96542.1\|2881732_2882473_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|153240
CP028913.1\|AWB96538.1\|2875318_2878375_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
CP028913.1\|AWB96552.1\|2893294_2894758_-\|dihydropyrimidinase	unknown	unknown	gnl\|CDD\|236240
CP028913.1\|AWB96546.1\|2885353_2886904_-\|methylmalonate-semialdehyde-dehydrogenase-(CoA-acylating)	unknown	unknown	gnl\|CDD\|143404
CP028913.1\|AWB96544.1\|2884011_2884797_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|223955
CP028913.1\|AWB96539.1\|2878374_2878947_-\|orotate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234771
CP028913.1\|AWB96540.1\|2878956_2880381_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377697
CP028913.1\|AWB96547.1\|2886907_2888236_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|235687
CP028913.1\|AWB96545.1\|2884837_2885317_+\|CinA-family-protein	unknown	unknown	gnl\|CDD\|334938
CP028913.1\|AWB96553.1\|2894786_2895635_-\|acyltransferase	unknown	unknown	gnl\|CDD\|143592
CP028913.1\|AWB96551.1\|2892267_2893284_-\|TIGR03842-family-LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|163554
CP028913.1\|AWB96555.1\|2897354_2899409_-\|elongation-factor-G	unknown	unknown	gnl\|CDD\|237186
CP028913.1\|AWB97013.1\|2900367_2900781_+\|DUF4406-domain-containing-protein	unknown	unknown	unknown
CP028913.1\|AWB96543.1\|2882967_2883885_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
CP028913.1\|AWB96550.1\|2890478_2891315_-\|nitrate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213260
CP028913.1\|AWB96541.1\|2880380_2881736_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377076
CP028913.1\|AWB96556.1\|2899559_2900318_-\|DeoR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
CP028913.1\|AWB97012.1\|2891311_2892241_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223673
CP028913.1\|AWB96554.1\|2895867_2897313_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|185378
CP028913.1\|AWB96549.1\|2889618_2890479_-\|nitrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223673

Protein	Function_ID	Function_description	E-value
CP028913.1\|AWB96542.1\|2881732_2882473_-\|hypothetical-protein	gnl\|CDD\|153240	cd03146, GAT1_Peptidase_E, Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.	6.89931e-47
CP028913.1\|AWB96538.1\|2875318_2878375_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	1.63726e-17
CP028913.1\|AWB96552.1\|2893294_2894758_-\|dihydropyrimidinase	gnl\|CDD\|236240	PRK08323, PRK08323, phenylhydantoinase; Validated.	0
CP028913.1\|AWB96546.1\|2885353_2886904_-\|methylmalonate-semialdehyde-dehydrogenase-(CoA-acylating)	gnl\|CDD\|143404	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.	0
CP028913.1\|AWB96544.1\|2884011_2884797_+\|enoyl-CoA-hydratase	gnl\|CDD\|223955	COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism].	5.78245e-54
CP028913.1\|AWB96539.1\|2878374_2878947_-\|orotate-phosphoribosyltransferase	gnl\|CDD\|234771	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated.	5.52104e-66
CP028913.1\|AWB96540.1\|2878956_2880381_-\|hypothetical-protein	gnl\|CDD\|377697	pfam06738, ThrE, Putative threonine/serine exporter. ThrE is a family of bacterial and Archaeal proteins that catalyze the export of L-threonine from the cell. UniProtKB:Q79VD1 has been characterized as being necessary for this export. The domain exhibits 10 putative TMs and catalyzes the proton-motive-force-dependent efflux of threonine and serine.	2.05004e-31
CP028913.1\|AWB96547.1\|2886907_2888236_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|235687	PRK06062, PRK06062, hypothetical protein; Provisional.	0
CP028913.1\|AWB96545.1\|2884837_2885317_+\|CinA-family-protein	gnl\|CDD\|334938	pfam02464, CinA, Competence-damaged protein. CinA is the first gene in the competence-inducible (cin) operon, and is thought to be specifically required at some stage in the process of transformation. This Pfam family consists of putative competence-damaged proteins from the cin operon. Some members of this family have nicotinamide mononucleotide (NMN) deamidase activity.	1.38927e-40
CP028913.1\|AWB96553.1\|2894786_2895635_-\|acyltransferase	gnl\|CDD\|143592	cd07568, ML_beta-AS_like, mammalian-like beta-alanine synthase (beta-AS) and similar proteins (class 5 nitrilases). This family includes mammalian-like beta-AS (EC 3.5.1.6, also known as beta-ureidopropionase or N-carbamoyl-beta-alanine amidohydrolase). This enzyme catalyzes the third and final step in the catabolic pyrimidine catabolic pathway responsible for the degradation of uracil and thymine, the hydrolysis of N-carbamyl-beta-alanine and N-carbamyl-beta-aminoisobutyrate to the beta-amino acids, beta-alanine and beta-aminoisobutyrate respectively. This family belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 5. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer. Beta-ASs from this subgroup are found in various oligomeric states, dimer (human), hexamer (calf liver), decamer (Arabidopsis and Zea mays), and in the case of Drosophila melanogaster beta-AS, as a homooctamer assembled as a left-handed helical turn, with the possibility of higher order oligomers formed by adding dimers at either end. Rat beta-AS changes its oligomeric state (hexamer, trimer, dodecamer) in response to allosteric effectors. Eukaryotic Saccharomyces kluyveri beta-AS belongs to a different superfamily.	4.32421e-142
CP028913.1\|AWB96551.1\|2892267_2893284_-\|TIGR03842-family-LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|163554	TIGR03842, F420_CPS_4043, F420-dependent oxidoreductase, CPS_4043 family. This model represents a family of putative F420-dependent oxidoreductases, fairly closely related to 5,10-methylenetetrahydromethanopterin reductase (mer, TIGR03555), both within the bacterial luciferase-like monoxygenase (LLM) family. A fairly deep split (to about 40 % sequence identity) in the present family separates a strictly Actinobacterial clade from an alpha/beta/gamma-proteobacterial clade, in which the member is often the only apparent F420-dependent LLM family member. The specific function, and whether Actinobacterial and Proteobacterial clades differ in function, are unknown. [Unknown function, Enzymes of unknown specificity].	0
CP028913.1\|AWB96555.1\|2897354_2899409_-\|elongation-factor-G	gnl\|CDD\|237186	PRK12740, PRK12740, elongation factor G-like protein EF-G2.	0
CP028913.1\|AWB96543.1\|2882967_2883885_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	2.31412e-30
CP028913.1\|AWB96550.1\|2890478_2891315_-\|nitrate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213260	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters. NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	1.5352e-115
CP028913.1\|AWB96541.1\|2880380_2881736_-\|hypothetical-protein	gnl\|CDD\|377076	pfam03605, DcuA_DcuB, Anaerobic c4-dicarboxylate membrane transporter.	1.6979e-139
CP028913.1\|AWB96556.1\|2899559_2900318_-\|DeoR-family-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.21466e-77
CP028913.1\|AWB97012.1\|2891311_2892241_-\|ABC-transporter-permease	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	3.64172e-31
CP028913.1\|AWB96554.1\|2895867_2897313_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|185378	PRK15481, PRK15481, transcriptional regulatory protein PtsJ; Provisional.	2.97555e-73
CP028913.1\|AWB96549.1\|2889618_2890479_-\|nitrate-ABC-transporter-permease	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	9.65785e-45

>CP028913.1|AWB96547.1|2886907_2888236_-|aspartate-aminotransferase-family-protein
MTDNLTDGLDELARELDREHVFHSWSAQSQGSNLVVASGRGSRVWDHAGREYLDFSSQLVNVNIGHQHPSVVQAIREQAELLTTIAPSTVNLPRGEAAKRIVAHAPAGFRRVFFTNGGADANENAIRMARLHTGRDKVLSTYRSYHGNTGAAVVATGDWRRIPNEFARGHVHFFGPYYYRSEFWATTPEQEAERALQHLRRVIEAEGPASIAAILLETIPGTAGVLVPPPGYLAGVRELCDRHGILLILDEVMAGFGRTGRWFAFDGYDVRPDLITFAKGVNSGYVPAGGVIIDEPIAETFDERVFPGGLTYSGHPLAMASIVATLDAMSSEGIVDHARDVGATVIAPALAELAERHAVIGEVRGEGVFWALELVADRATREPLPAAAMGRLKSALVARGLLPFVQDNRIHVVPPCVVTAEEVADAMAIYDEVLSTALEGEG
>CP028913.1|AWB96546.1|2885353_2886904_-|methylmalonate-semialdehyde-dehydrogenase-(CoA-acylating)
MGQTDLNTSSPGETQPLDAELVTVDHWIDGASVAGDSARSGPVYNPARGVEQKRVRFASTEDVDVAVQAAARAFPAWRDTSIAKRQQVMFAFRELLNARSDELAAILTSEHGKVLSDAAGEIARGLEVVELACAMPGYAKGEYSENVSTGIDVYSTKQPVGVVGIISPFNFPAMVPLWFFPLAIATGNTVVLKPSEKDPSASIWLARLMQEAGLPDGVLNVVHGDKVAVDALLEHPVVRSISFVGSTPIAKYIYATATAHGKRVQALGGAKNHMLVLPDADLDLAADAAVNAGFGSAGERCMAVSVVLAVDSVADELVEKIGERMSRLTTGDGTRGCDMGPLITREHRDKVVGYLEVAAADGASVVVDGRSAPINGEPDGFWLGPTLVDKVPLESSVYRDEIFGPVLSVVRVDGYQDGVDVINDSPYGNGTAIFTNDGGAARRFQREVTVGMIGINVPIPVPVAYHSFGGWKDSLFGDAKAYGPRGFDFFTQEKAVTSRWLDPSHGGLNLGFPQHE
>CP028913.1|AWB96545.1|2884837_2885317_+|CinA-family-protein
MQDPADEFAAIARDIASRTQAAGVRVATAESLTSGAIANALGAAPDASEWFQGGVVAYAESVKRSVLGVTAESVTSTQGARELAEGVARLLDADATVAVTGVGGPGPEDGEPAGSVYAAVSVRGKILDAHFQFDGGDPSAVVHQTVRAALEMLRDALPR
>CP028913.1|AWB96544.1|2884011_2884797_+|enoyl-CoA-hydratase
MSDDAILFDVSDGLARITLNRPARLNAVDPEAIARWQVLAHEIAERDDIGAVLFDANGRAFCAGGDVVAMSQLAAGEPDAGAVITGLADRIHDGHRTLRESAKPIVAAVQGPVAGGGLGFMLVADLVIASEHATFASRYADVALTPDCGVSTLLPEAIGTRRALELTLTSRTLTATEALDWGLVTEVVAPGALEARAREIAAGWLAGATGAFGQAKRLVRSGLERPFADALDDEARTIGAAFETPQAQAAISAFTARSGSR
>CP028913.1|AWB96543.1|2882967_2883885_+|LysR-family-transcriptional-regulator
MDVRRLDLLRELAERGSITAVAEATGRTPSAVSQQLKVLEREAGMPLTERSGRGVALTSAGHALARSAADVAIALERATALWDEFRNHPSGEVSLLTFPTIGATLLPAVLADLAPVAGLVVNATDLDPGLAEFADLTADFDIVLAHTMPGVLPWGGRGLKAVPLLTEPLDIGIPADHRLAGRAHVTPADLVDETWLSVPPGFPFERILHAIEQQTGHRATVRQRFSDMRIIEAFIEAGLGIAFVPRYTTGTVPDSIVLKPLRGVASARQIVALVRPDVAERLAVRTVLDVLVARASRLERAHAAA
>CP028913.1|AWB96542.1|2881732_2882473_-|hypothetical-protein
MAHVVATGAGKVMMERRADPTHEYILKLTGKERPRVLFVGTATGDDAAYIVSFYTTYDSDRCAPHHLPLFHRAVDDLAGFVRGFDVIHVGGGNTANMLDVWKRQGLDEIMREMWEDPSSNTVFTGGSAGGICWFEGGTTDSYGPTLQVLPEGLGFLHGSFCPHYDAEDQRQPLFHASLLSGELTTGYAVGNLQSLHFDGSEFVTAISPVENALALKVEAVDGSIVETKLPVQVLESTGPIAKGPSS
>CP028913.1|AWB96541.1|2880380_2881736_-|hypothetical-protein
MNDNVWILVAELIVVIAAIFMGTRTSGIGLGVWGLVGVAVLIFVFGEAPGNAPVDAVFIVITVITAASVMQAAGGIDWMVSVAAKVIKKRPKSVVFLAPAMSFLFTVGAGTGNIFYPLLPVIYDVSYQQKIRPERALSVSAVASQVGILCSPVSAATASMVVLLAPQGVDLGKLLLIMWPASIVGLAVAAIVMVRKGKELEDDPEFQRRLAAHLVKPAVQVDVDKKLPRSAVLSASLFLAGVGVIVLFGLFEGIRPVIGTDDDGDPLRVSITVIIEVVMGIIAALIFVTCKVKASDVPKQSTFPAGIVGAIALFGIAWLANTFVAANNTLIVEGLGSLVSGSSAFLGALLFAFALFVVAMLTTSQSSATNAIVPIGITIGLPASLLVGLWPAAMGIYTLPANGSQVATVAFDQTGTTKMGKFVVDHSFQLPNLIYVVVAIIVGVALSFVIV
>CP028913.1|AWB96540.1|2878956_2880381_-|hypothetical-protein
MAEAGDQALLRRFLLGLAEGMNAAADSVDKIRDTLVQVSRANGREDTDFVVLPTVIIIQTGAGEEGRVAIRSAVNASFRFDQIAALYRLIDDAKRAEIAPLDGIKRLNDIGAMKPSHGWVVRTFGHAVLTTGLALLLAPTWEGALVAFVLGAFIGVAKLVRSPTLQIVFPVFAAFVCAIAVFLIAPYFAVGDPIKLLIAPLATFLPGGVLTTAVVELAAGQMLAGASRLVFGLVQLSLLAFGILAAGTLVGVGSSSYVPLQTNEAFPWWTAMVGVLLFAIGNYLHFSAPPRTFGWVLLVLLVAYGGQVVGSALIGASVSGFIGALAMTPVVLWIATLRHGAPSQLTFLPAFWLLVPGAAGLVGLTEAIGTTRGFEDFTEALISIMSIALGVLIGTALYRVVHQGAEELADFHIEVPASLTEEEKPPFWARLVPGTPRTFWRRRRRRPTPDHRGDASSTPAATEESSPFSQATES
>CP028913.1|AWB96539.1|2878374_2878947_-|orotate-phosphoribosyltransferase
MTLRDAKHTDAARSRLIDFIAADAVFHGDFTLTSGKKASYYVDLRKVSLDHRVAPLIGEVMIDLIKDVPDVFAVGGMTMGADPIAAAVLHQGAARGLSYDAFVVRKEPKDHGRGKQVEGPDLAGKRVIVVEDTSTTGGSPLQAIEALKKVGAEVVAVAVVVDRATGAREVIEAAGVPYLAAIGLEDLGLA
>CP028913.1|AWB96538.1|2875318_2878375_-|hypothetical-protein
MSRDGQGLGGDGADWLLAQLASGTAPHRDVPPQPPVATPAQPGHQLPPVGHPPVAPGTPAPRRDEVLDWFSEAPAQAAAQAPDAATRSLPVVGAPTPQQSSSTPPVYLTQVEPPVGTPGPAPLRPAAAPWPPAVSSAPPVAPAAPAPLPPLAPSGYPTVESLSPAARPFVPVVPATRPVAEPTPPGPVTPTAPFALTWGSEELESEDAIRAAFRSLSDPAPSEAQTHEASVAPAAPVQPFPPVTPAAAPVAPATPVAPAAPVAPVPPVDAESPFAGFAPPPVARQSFTPVRPAVTPTHPTTPLTAPAGWDAPVMPATPSTAPAGWDAPASPIPPTSPATPSTAPAGWDAPASPIPPTSPATPSTAPAGWDERRPRASAPAANYDDELWAALHEPEPVANPASAQPTQQAAPARAENDRFAAFAADTTDPFAALAATTALPVQPSAPETEPRPGSASGQQPNAAPAREAHAFNATPFPAFASGASGGDDPTREPPEPVDDLLASLGSGAPRTRDAVPPARESATPGGATPPTGPVPSGLDALGFGFDDEPEAADDTAPRRGVDAEATPGIRGRFFGRGRNPEPEFDEDEAPDGLEAGETGYLWNLTPDPTAEDPKDRPEAVATSFLAAPGAAGDGATDVFGAGWRDDAELEVEPQPDAGPDVEPEPDVEPDLDPAGEQGMQPDWAFPQDTAPFPSDFADRLTAGPAFDAATIALPVSDSSAAASTPAAASTPAAASDDSVTALFGAAASDPFGSPRASNDPFGAPAPGAQPAAGGSPTTPVGGPASTGIGPQRGGAGRPGGPNGNGNGGGGGNGGAAGGTGGRPPGAPKGGNRTLRTLIWVAGGLVVLLVIAGLYFVGTQLSSDDDGGGQASGSASASASETPVVEPTGPQPAGVHAWNTLFGGECIDPFDSVWAEEFTVVDCAAPHAAQLVYRGTLPGDAAAPFPGEAELAAQMPALCRAAGVFEPTLVAGIGDLQVLGSFPVTEEQWAEGQRNYYCFANRAGGEPLTGAINGPGPTA
>CP028913.1|AWB96549.1|2889618_2890479_-|nitrate-ABC-transporter-permease
MSATAASTGAAPQGRGGSRPHGMSPRTETTLRIVAPVAVGLIVLGIWQFLVSVVGVSDYLLPSPASIVEELIAYWPSVVQATLLTGTNALLGLIVGSILGIALAALAARWRPIDQMSAPVVASLAVIPIVALAPVLNSMFGADSQFGRQAIAALASFVPVFVNTLRGFRQTDPVHRDLMKAYAANSGQVLRTLTLPTARPFILTGIRIASSLAVISALVAEYFGGPRGGLGGLISTSAASSAYARAWAYVVASIALGLLFYLATLALERLLQPAGNGRTTPSDGAN
>CP028913.1|AWB96550.1|2890478_2891315_-|nitrate-ABC-transporter-ATP-binding-protein
MTDATPAIAAVEISGVDKVFETRSGQVQALDSIGLTVAAGEFVSLIGPSGCGKSTLMRLVADLDQPSSGSLSVFGKSAKQARLDQEYGIAFQQAGLLPWRTVEGNVALPLELHGAASAARTARVAELLDMVGLSDFADRYPDQLSGGMQQRVAIARALAEQPRLLLMDEPFGALDEMTREKMQTELVRISAETGAAVVFVTHSIPEAVFLSDRVVVMSPRPGRIQEIVPMRLGADAQRAARTEELREERGFFDMVTAVREALHGGSPVAAGPRGVENR
>CP028913.1|AWB97012.1|2891311_2892241_-|ABC-transporter-permease
MTDAAAPAPGIRASRRPGRAGRGVGRWVWGLAGILVIALVWEGYKLLGPADGVVLGGMRVLPRTTDLAMPHVWDMGARLAEPVTRADDALPLWAVVALAALTTLGIAAAGWLVGVVVGIGLALVMQRWRIAEWGLLPWIVLSQTVPLIAFAPVVKSWGSRVEIGSFEWQDWMSVALIASYLAFFPIAIGALKGLQSPDRIHTELMQTYAAGYWQTLVKLRFPASVPYLLPALRLGAANAVIGAVVAEVSTGLQGGIGRILIQFAGQASGDPAKAWGPIFGSIVLGLVAAGSVALLGVILTNYRRTEEAA
>CP028913.1|AWB96551.1|2892267_2893284_-|TIGR03842-family-LLM-class-F420-dependent-oxidoreductase
MEFGAVLQTNPPASRTIQLAKLAENHGFTHVWTFDSHLLWQEPYVIYSQILAETRKVKVGPFVTNPATRDWTVTASIFATLNEMYGNRTICGIGRGDSAVRVTNGKPTTIAELREAIHVIRELANSRPVEYHGSQLQFPWSHGSELDVWVAAYGPMALKLTGEVGDGFILQLADVDIAAWMIQHVRDAAEAAGRDPMSIKFCVAAPMYIGDDWEHMREQCRWFGGMVGNHVADIVTKYGAHGAVPDALTDYIAAREGYDYNEHGRAGNVHTAFVPDEIVDRFCLLGTAEQHIEKLEQLKALGVDQFAGYLQHDNKEETLRVYGETVIPALSEHLTAKA
>CP028913.1|AWB96552.1|2893294_2894758_-|dihydropyrimidinase
MTTTLITGGTVVSATGRAAADVLVDGETIRAVLEPGAALLGTDVAASVDRVIDATGKYVIPGGIDAHTHMELPFGGTAAIDTFETGTRAAAWGGTTSIVDFAVQTYGQRIEDGLAAWHEKAAGNCAIDYAFHQIVGDVNEASLASLARLPDEGVTSFKLFMAYPGVFYSDDAQILKAMQVSRDTGMLTMMHAENGPAIDVLAQQLVEQGKTDPFYHGIARAWEMEEEATHRAIMLAKLTGAPLYVVHVSANQAVEQLAWARDKGQNVYGETCPQYLYLSLEDQLGATSEEWSAFEGAKWVCSTPLRSREEGHQDSMWRALRTNDLQMVSTDHCPFCMKDQKELGLGDFRKIPNGIGSIEHRMDLMYQGVVTGEITLERWVELTSTTPARMFGLYGRKGVIQPGADADLVVYDPNGHTSIGMPVDEAGRPTGRKHHMNMDHAAWEGFEIDGHVDTVLSRGKVIVDDDQYLGAKGDGRFLARGLSQYLI
>CP028913.1|AWB96553.1|2894786_2895635_-|acyltransferase
MTIVRAAITQTTWTGDKESMLDKHEQFARDAKAQGAQVISFQELFYGPYFGITEDVKYYDYAEPADGPIVQRFAALAKELGMVMVLPIYEEEQPGVYYNTAVVVDADGTILGSYRKHHIPNLDKFWEKFYFRPGNLGYPVFNTAVGPIGVYICYDRHFPEGWRELGLNGAQIVFNPNATKPGLSNRLWEIEQPAAAAANGYFVAAANRVGLEDNEYGDLAVNFYGKSQFCDPQGNIVGGYGSESDEEVVVRDLDLDMIRKVRNAWQFYRDRRPDSYTSIPKP
>CP028913.1|AWB96554.1|2895867_2897313_+|GntR-family-transcriptional-regulator
MVVSGIRANGFQVTDVRVDGAALIALAEFPEPSPRGIAGVIARLVNSGELAAGTRLPTVRELASELGVSPATVSQAWQALSRTGLIESRGRAGSFVRPLSPGWLAPRMRGMAAPNDPVRLDLSRGTPDPLLLPALGPALSRVSARAETGSYQAEPVIPALAAVLEASWPSEAESIMVVDGALDAISRTLEQLVRFGDRVVVESPGFPPFLDLLEVLGAEPVPVRLDEHGMVPEALARALLRRPVAVLLQPRAQNPTGASMNAERAVALARVIRSAPDVNDLVVVEDDHSGLISTEGDVSLGGALPGRVVHVRSFSKSHGPDLRIAALGGPRDLVERVVARRMLGPGWTSRMVQTILLDLLTEGTSIDAVAEARRQYYTRQRALGDALRARGVAVAPADGINLWMPVLSERSALVQLAAAGVRVAAGTPFLAASDVAEAANGARTRAGGDFVRVTVGMLRDGTDEIADALASAAHHVAAGGY
>CP028913.1|AWB96555.1|2897354_2899409_-|elongation-factor-G
MNSAPNPTHRAVALVGGAGSGKTTLLEALLLRAGAIPRAGSVEQGTTVGDHEPEEIARGMTLGLSLAHLAWAGPDGTEQTVTLADTAGHPDFVGSVDTALAVADVAVLTVSAVDGVTAGTRSAWAAVQAAGVPLIVVITQEDRARADFRRVLEELRVAFGERLVALELPLGEEHDFTALADVLSERALVYDDTGRHHDEPLPAGAAEVEGHRMHVEVAEEIVSHDDEQLEAYLDGREPAASELERTLAREVAAGEAIPVVACSAVNDTGIDRVADLVCALAPSALDHDSRIVMGGTEVAVAPNPDGETLLHVFRTVADPFVGQVSMFKVLSGVVRPSARLHNATTGSDERLHGLFRLRGADHLPADVLRAGDVGAVAKLTGSPSGTLLWTRVGGSARPAPLPRREPVFAVTLTPVAQSDDEKLMTSLGRIVAEDPTLVIDRTGGEAILRGLGDTHVAVAVERLARVFGVHVTTGPAPIAYRETISGRAEAEGRLKKQSGGHGQFAVVQLRVSPLPLGGGFEFVDSVVGGAVPRSYIPAVEKGARDALAAGGPQGHPVVDVRVELVDGKSHSVDSSDMAFGTAASIGVKAALAEAGTVLLEPVSLVTVTVPSELQGTVLTDLSGRRGRVSATEAADDGRARIVASVPEAELGRYVLDLRSITGGRAELTITPDHYARMLPGAVDR
>CP028913.1|AWB96556.1|2899559_2900318_-|DeoR-family-transcriptional-regulator
MLAAQRRELLLELLQRDGRIVAADAAADLGISEDTIRRDLRELAAAGLCQRVYGGALPASPAVEPYEARTRIEPESKHRIAAAAAALIEPGATVLLDGGTSTLALVGALPRSLHATVITHSPTIAVALAEHEHIELQLIGGRVYRHSMVTCGAIAVEALRDVSADLFFLGVTGVHAEAGLTTGDAEEAAMKRALTRSAAETYVLASTEKIGAASTYRVLPLDEVAGVVTDADAASPAMLELDRAGVRLLPAS
>CP028913.1|AWB97013.1|2900367_2900781_+|DUF4406-domain-containing-protein
MSKPLLILIAGPYRSGTDGDPARIARNLERLEAASWPIYERGHVPMIGEWVALPILRVASTDASGPDASAAPTDAAPVEGDVMYTTAHRLLQHCDAVLRLEGASHGADQDVRIAEARGIPVYRSIDEIPVLEAAPVA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP028913_5	5.1\|2386271\|25\|CP028913\|CRISPRCasFinder	2386271-2386295	25	NZ_CP015746	Shinella sp. HZN7 plasmid pShin-10, complete sequence	59203-59227	2	0.92
CP028913_5	5.1\|2386271\|25\|CP028913\|CRISPRCasFinder	2386271-2386295	25	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	2313496-2313520	3	0.88
CP028913_5	5.1\|2386271\|25\|CP028913\|CRISPRCasFinder	2386271-2386295	25	NZ_CP013109	Sinorhizobium americanum strain CFNEI 73 plasmid B, complete sequence	321815-321839	3	0.88
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NC_019408	Caulobacter phage CcrRogue, complete genome	113301-113331	4	0.871
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NZ_CP032325	Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence	601216-601246	4	0.871
CP028913_5	5.1\|2386271\|25\|CP028913\|CRISPRCasFinder	2386271-2386295	25	NZ_CP022417	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-2, complete sequence	27303-27327	4	0.84
CP028913_5	5.1\|2386271\|25\|CP028913\|CRISPRCasFinder	2386271-2386295	25	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3698564-3698588	4	0.84
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	MK433266	Streptomyces phage Shawty, complete genome	19441-19471	5	0.839
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1468362-1468392	5	0.839
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NZ_CP031358	Erythrobacter aureus strain YH-07 plasmid unnamed, complete sequence	389489-389519	5	0.839
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	KJ510412	Mycobacterium phage ZoeJ, complete genome	26332-26362	5	0.839
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NC_018452	Burkholderia phage DC1, complete genome	48257-48287	5	0.839
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	FJ937737	Burkholderia cenocepacia phage BcepIL02, complete genome	49043-49073	5	0.839
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NC_012743	Burkholderia phage BcepIL02, complete genome	49043-49073	5	0.839
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1810405-1810435	5	0.839
CP028913_5	5.1\|2386271\|25\|CP028913\|CRISPRCasFinder	2386271-2386295	25	NZ_CP013423	Burkholderia sp. MSMB0852 plasmid pMSMB0852, complete sequence	40698-40722	5	0.8
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	MH779514	Mycobacterium phage Paito, complete genome	34264-34294	6	0.806
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NZ_CP009112	Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence	315309-315339	6	0.806
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1511228-1511258	6	0.806
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	AP017627	Pleomorphomonas sp. SM30 plasmid pSM30-1 DNA, complete genome	6650-6680	7	0.774
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NC_003903	Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence	225076-225106	7	0.774
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	559606-559636	7	0.774
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	MT639639	Gordonia phage LittleFella, complete genome	43011-43041	7	0.774
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NZ_CP007796	Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence	45658-45688	7	0.774
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	CP000662	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence	571007-571037	8	0.742
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	659146-659176	8	0.742
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	673647-673677	8	0.742
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	MK373789	Escherichia phage vB_EcoS_PTXU06, complete genome	18667-18697	8	0.742
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	621565-621595	8	0.742
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	555004-555034	8	0.742
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NZ_CP021373	Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence	396662-396692	8	0.742
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NZ_CP023549	Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence	499627-499657	8	0.742
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	62116-62146	9	0.71
CP028913_3	3.1\|1779764\|31\|CP028913\|CRISPRCasFinder	1779764-1779794	31	KF626665	Phage Sano, complete genome	12523-12553	9	0.71

1. spacer 5.1|2386271|25|CP028913|CRISPRCasFinder matches to NZ_CP015746 (Shinella sp. HZN7 plasmid pShin-10, complete sequence) position: , mismatch: 2, identity: 0.92

ctcgatcacgactgcgccgctcagg	CRISPR spacer
ctcgaccacgactgcggcgctcagg	Protospacer
*****.********** ********

2. spacer 5.1|2386271|25|CP028913|CRISPRCasFinder matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 3, identity: 0.88

ctcgatcacgactgcgccgctcagg	CRISPR spacer
ctcgatgacgactgcgccgttcaag	Protospacer
****** ************.***.*

3. spacer 5.1|2386271|25|CP028913|CRISPRCasFinder matches to NZ_CP013109 (Sinorhizobium americanum strain CFNEI 73 plasmid B, complete sequence) position: , mismatch: 3, identity: 0.88

ctcgatcacgactgcgccgctcagg	CRISPR spacer
cacgttcacgagtgcgccgctcagg	Protospacer
* ** ****** *************

4. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NC_019408 (Caulobacter phage CcrRogue, complete genome) position: , mismatch: 4, identity: 0.871

gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
gaagtcgtcggtcgcggcctacttcggcgcg	Protospacer
*  ********.******** **********

5. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 4, identity: 0.871

-gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
cgccgacg-cggccgcggccttcttcgacgcg	Protospacer
 *.** ** ******************.****

6. spacer 5.1|2386271|25|CP028913|CRISPRCasFinder matches to NZ_CP022417 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-2, complete sequence) position: , mismatch: 4, identity: 0.84

ctcgatcacgactgcgccgctcagg	CRISPR spacer
ctcgatcacgacggtgccgctcatc	Protospacer
************ *.********

7. spacer 5.1|2386271|25|CP028913|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 4, identity: 0.84

ctcgatcacgactgcgccgctcagg	CRISPR spacer
ctcgagcacggctgcgccgctcact	Protospacer
***** ****.************

8. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to MK433266 (Streptomyces phage Shawty, complete genome) position: , mismatch: 5, identity: 0.839

gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
gtcgtcgtcggcaacggccttcttcgcctgg	Protospacer
************ .************ *  *

9. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.839

-gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
cggcgt-gtcggcggcggccttcttcggcggt	Protospacer
 * *** ****** ****************

10. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NZ_CP031358 (Erythrobacter aureus strain YH-07 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.839

-gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
cggcttc-ttggctgcggccttcttcggcgcg	Protospacer
 * * ** *.***.******************

11. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to KJ510412 (Mycobacterium phage ZoeJ, complete genome) position: , mismatch: 5, identity: 0.839

gtcgtcgtcggccgcggccttct--tcggcgcg	CRISPR spacer
gtcgtcgtcggccgcgggctcctcgtcgtcg--	Protospacer
***************** **.**  *** **

12. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NC_018452 (Burkholderia phage DC1, complete genome) position: , mismatch: 5, identity: 0.839

-gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
ggccggcg-cgggcgcggcattcttcggcgcg	Protospacer
 *.** ** *** ****** ************

13. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to FJ937737 (Burkholderia cenocepacia phage BcepIL02, complete genome) position: , mismatch: 5, identity: 0.839

-gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
ggccggcg-cgggcgcggcattcttcggcgcg	Protospacer
 *.** ** *** ****** ************

14. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NC_012743 (Burkholderia phage BcepIL02, complete genome) position: , mismatch: 5, identity: 0.839

-gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
ggccggcg-cgggcgcggcattcttcggcgcg	Protospacer
 *.** ** *** ****** ************

15. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 5, identity: 0.839

gtcgtcgtcggccgcggccttcttcggcgcg-	CRISPR spacer
gtcgtcgtaggccgcggcc-tcctcgccgggg	Protospacer
******** ********** **.*** ** *

16. spacer 5.1|2386271|25|CP028913|CRISPRCasFinder matches to NZ_CP013423 (Burkholderia sp. MSMB0852 plasmid pMSMB0852, complete sequence) position: , mismatch: 5, identity: 0.8

ctcgatcacgactgcgccgctcagg	CRISPR spacer
atcgatcacgactgcgccgccttgc	Protospacer
 *******************.. *

17. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to MH779514 (Mycobacterium phage Paito, complete genome) position: , mismatch: 6, identity: 0.806

gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
ctcggcgtcggccgcggccttcttcacggcc	Protospacer
 *** ********************.  **

18. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NZ_CP009112 (Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence) position: , mismatch: 6, identity: 0.806

gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
gtgagtgccggccgcggccttcttcggtgcg	Protospacer
** . .*.*******************.***

19. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 6, identity: 0.806

-gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
cggcgt-gttggcggcggccttcttcggcggt	Protospacer
 * *** **.*** ****************

20. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to AP017627 (Pleomorphomonas sp. SM30 plasmid pSM30-1 DNA, complete genome) position: , mismatch: 7, identity: 0.774

gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
gccgagcgcggccgcggccttcttcagcgcc	Protospacer
*.**    *****************.****

21. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NC_003903 (Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence) position: , mismatch: 7, identity: 0.774

gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
ctggccgtaggccgcggccttcttcagcggc	Protospacer
 * *.*** ****************.***

22. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 7, identity: 0.774

-gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
tgccatt-ccggccgcggccttcatcgccgcg	Protospacer
 *.*.*. .************** *** ****

23. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to MT639639 (Gordonia phage LittleFella, complete genome) position: , mismatch: 7, identity: 0.774

gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
ggagtcgtcggctgcggccttctccgctgcc	Protospacer
*  *********.**********.** .**

24. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 7, identity: 0.774

gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
cgcggccgcggccgcggccgtcttcgacgcg	Protospacer
  ** *  *********** ******.****

25. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 8, identity: 0.742

gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
ctacatgtcggccgcggccttcctcggcgtc	Protospacer
 *   .****************.******.

26. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
gcgcgtttcggccgcggcctgtttcggcgcg	Protospacer
*.   . ************* .*********

27. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.742

gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
cgcgcgctcggccgcggcctgctccggcgcc	Protospacer
  **.  ************* **.******

28. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to MK373789 (Escherichia phage vB_EcoS_PTXU06, complete genome) position: , mismatch: 8, identity: 0.742

gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
gactcgaacggcggcggccttcttcggggcg	Protospacer
* * . . **** ************** ***

29. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.742

gtcgtcgtcggccgcggccttct----tcggcgcg	CRISPR spacer
gtcgtcgtcggcctcggctttctgatcccga----	Protospacer
************* ****.****    .**.

30. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 8, identity: 0.742

gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
gaccggcccggccgaggccctcttcggcgcg	Protospacer
* *    .****** ****.***********

31. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NZ_CP021373 (Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence) position: , mismatch: 8, identity: 0.742

gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
gaacttcacggcctcggccttgttcggcgcg	Protospacer
*   *.  ***** ******* *********

32. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
ctacatgtcggcagcggccttcctcggcgtg	Protospacer
 *   .****** *********.******.*

33. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.71

gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
ctacccgtcgcccgcggccttcttcagcttc	Protospacer
 *  .***** **************.** .

34. spacer 3.1|1779764|31|CP028913|CRISPRCasFinder matches to KF626665 (Phage Sano, complete genome) position: , mismatch: 9, identity: 0.71

gtcgtcgtcggccgcggccttcttcggcgcg	CRISPR spacer
cggagcatcggcggcgaccttcttcggcgca	Protospacer
   . *.***** ***.*************.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2489194 : 2496404

Pandoravirus(16.67%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWB96258.1\|2489194_2490007_-	dihydropteroate synthase	S4VNV0	Pandoravirus	6.1e-22	33.6
AWB96259.1\|2489999_2490596_-	GTP cyclohydrolase I FolE	A0A1W7AF02	Streptococcus_virus	1.1e-31	39.6
AWB96961.1\|2490638_2492657_-	cell division protein FtsH	G8DDJ2	Micromonas_pusilla_virus	9.9e-106	43.4
AWB96260.1\|2492745_2493297_-	hypoxanthine phosphoribosyltransferase	A0A1V0SEQ1	Hokovirus	8.1e-10	30.4
AWB96261.1\|2493350_2494412_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
AWB96262.1\|2494524_2495010_+	inorganic diphosphatase	A0A2H4J8U1	uncultured_Caudovirales_phage	6.2e-38	49.1
AWB96263.1\|2495126_2496404_-	NlpC/P60 family protein	A0A1J0GW44	Streptomyces_phage	2.1e-16	51.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP028913

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection