CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP029121	Escherichia coli strain AR435 plasmid unnamed8, complete sequence	0 crisprs	NA	0	0
CP029114	Escherichia coli strain AR435 plasmid unnamed2	0 crisprs	NA	0	0
CP029117	Escherichia coli strain AR435 plasmid unnamed4	0 crisprs	c2c9_V-U4	0	1
CP029120	Escherichia coli strain AR435 plasmid unnamed7	0 crisprs	NA	0	0
CP029115	Escherichia coli strain AR435 chromosome, complete genome	5 crisprs	c2c9_V-U4,RT,DEDDh,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK	14	10
CP029113	Escherichia coli strain AR435 plasmid unnamed1, complete sequence	0 crisprs	NA	0	1
CP029116	Escherichia coli strain AR435 plasmid unnamed3	0 crisprs	NA	0	0
CP029119	Escherichia coli strain AR435 plasmid unnamed6	0 crisprs	NA	0	0
CP029118	Escherichia coli strain AR435 plasmid unnamed5, complete sequence	0 crisprs	DEDDh,RT	0	2

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

42670 : 75594

Salmonella_phage(33.33%)

tRNA,integrase,transposase,protease

attL 35523:35536|attR 58269:58282

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
35523:35536	attL	NA	NA	NA	NA
AWF18820.1\|42670_43069_-\|tRNA	tRNA(fMet)-specific endonuclease VapC	NA	NA	NA	NA
AWF18768.1\|43068_43296_-	antitoxin VapB	NA	NA	NA	NA
AWF18888.1\|43581_48648_+	conjugative transfer relaxase protein TraI	NA	NA	NA	NA
AWF18764.1\|48923_50465_+\|integrase	integrase core domain protein	K4I413	Acidithiobacillus_phage	1.3e-129	46.4
AWF18890.1\|50476_51226_+	istB-like ATP binding family protein	K4HZD4	Acidithiobacillus_phage	3.9e-55	48.3
AWF18881.1\|51325_52000_+	type-F conjugative transfer system pilin acetylase TraX	A0A077JBM8	Xanthomonas_phage	2.4e-08	30.5
AWF18870.1\|52054_52615_+	fertility inhibition protein	NA	NA	NA	NA
AWF18802.1\|52927_53065_+	hypothetical protein	NA	NA	NA	NA
AWF18858.1\|53366_53993_+	NYN domain protein	NA	NA	NA	NA
AWF18772.1\|54144_54714_+	hypothetical protein	NA	NA	NA	NA
AWF18796.1\|55088_55355_+	hypothetical protein	NA	NA	NA	NA
AWF18825.1\|55897_56065_-	hypothetical protein	NA	NA	NA	NA
AWF18850.1\|56031_56289_+	replication regulatory RepB family protein	NA	NA	NA	NA
AWF18824.1\|56591_57449_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
AWF18827.1\|58149_58290_+	hypothetical protein	NA	NA	NA	NA
58269:58282	attR	NA	NA	NA	NA
AWF18867.1\|58268_58391_+	hypothetical protein	NA	NA	NA	NA
AWF18859.1\|58387_59041_+\|protease	CAAX protease self-immunity family protein	NA	NA	NA	NA
AWF18829.1\|59133_59391_+	antitoxin PemI	NA	NA	NA	NA
AWF18769.1\|59392_59725_+	mRNA interferase PemK	NA	NA	NA	NA
AWF18854.1\|59861_62759_-	hypothetical protein	A0A1B0V7H9	Salmonella_phage	4.2e-182	37.8
AWF18804.1\|62853_63459_+	resolvase, N terminal domain protein	A0A1S5Y2X8	uncultured_archaeal_virus	9.4e-20	35.3
AWF18856.1\|63455_64217_-\|transposase	tn3 transposase DDE domain protein	A0A1B0V7H9	Salmonella_phage	1.9e-134	98.4
AWF18797.1\|64220_64628_+	isochorismatase family protein	NA	NA	NA	NA
AWF18857.1\|64765_65650_+	multidrug resistance efflux transporter family protein	NA	NA	NA	NA
AWF18851.1\|65681_66881_-	tetracycline resistance protein, class C	NA	NA	NA	NA
AWF18834.1\|66986_67637_+	tetracycline repressor protein class B from transposon Tn10	NA	NA	NA	NA
AWF18837.1\|67952_69542_-\|transposase	tn3 transposase DDE domain protein	A0A1B0V7H9	Salmonella_phage	1.4e-293	100.0
AWF18767.1\|69532_70237_+\|transposase	transposase IS66 family protein	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWF18771.1\|70438_71227_+	nucleotidyltransferase domain protein	NA	NA	NA	NA
AWF18847.1\|71773_72613_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AWF18826.1\|73099_74305_+	chromate transporter, chromate ion transporter family protein	NA	NA	NA	NA
AWF18864.1\|74315_74621_+	winged helix DNA-binding domain protein	NA	NA	NA	NA
AWF18853.1\|74646_74760_-	hypothetical protein	NA	NA	NA	NA
AWF18765.1\|74772_75594_-\|transposase	putative transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP029117

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 116920

153

Escherichia_phage(59.26%)

terminase,plate,transposase,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWF23829.1\|0_115_-	ddrB domain protein	A0A077SK08	Escherichia_phage	2.1e-13	100.0
AWF23701.1\|296_890_+	helix-turn-helix domain protein	A0A077SL42	Escherichia_phage	1.6e-104	98.4
AWF23780.1\|1021_1444_+\|transposase	transposase, IS605 OrfB family	A0A077SL42	Escherichia_phage	4.5e-69	100.0
AWF23699.1\|1482_1767_-	putative upf26.7	A0A1B0V846	Salmonella_phage	1.2e-38	73.3
AWF23747.1\|1871_2000_-\|head	putative internal head protein	A0A077SLK4	Escherichia_phage	9.5e-07	100.0
AWF23711.1\|2019_2145_-\|head	putative internal head protein	A0A077SLK4	Escherichia_phage	3.4e-09	82.5
AWF23788.1\|2113_2341_-\|head	putative internal head protein	A0A077SLK4	Escherichia_phage	2.4e-24	94.6
AWF23722.1\|2360_2498_-\|head	putative internal head protein	NA	NA	NA	NA
AWF23765.1\|2521_2809_-\|head	putative internal head protein	A0A077SLK4	Escherichia_phage	1.3e-30	94.4
AWF23685.1\|3043_3241_+	hypothetical protein	NA	NA	NA	NA
AWF23739.1\|3265_3481_-	putative darA domain protein	A0A077SLK4	Escherichia_phage	9.7e-28	98.5
AWF23827.1\|3437_3647_-	putative darA domain protein	Q1MVM7	Enterobacteria_phage	1.4e-07	100.0
AWF23751.1\|3737_4328_-	hypothetical protein	Q1MVM6	Enterobacteria_phage	9.8e-30	47.3
AWF23787.1\|4314_4467_-	hypothetical protein	NA	NA	NA	NA
AWF23815.1\|4517_4631_-	putative lydB	Q37877	Escherichia_phage	6.4e-15	97.3
AWF23708.1\|4831_4948_+	hypothetical protein	NA	NA	NA	NA
AWF23784.1\|5834_5948_-	helix-turn-helix domain of resolvase family protein	A0A0A7NPV4	Enterobacteria_phage	4.6e-05	77.8
AWF23720.1\|5977_6394_-	resolvase, N terminal domain protein	A0A1S6L009	Salmonella_phage	5.1e-65	91.1
AWF23731.1\|6433_6577_+	hypothetical protein	NA	NA	NA	NA
AWF23828.1\|6651_6843_+	hypothetical protein	NA	NA	NA	NA
AWF23737.1\|6995_7145_-	hypothetical protein	NA	NA	NA	NA
AWF23810.1\|7185_7353_+\|tail	caudovirales tail fiber assembly family protein	E5G6P1	Salmonella_phage	3.0e-08	57.7
AWF23805.1\|7324_7498_-\|tail	caudovirales tail fiber assembly family protein	U5P0S4	Shigella_phage	1.6e-12	82.2
AWF23745.1\|7464_7632_+	hypothetical protein	NA	NA	NA	NA
AWF23762.1\|7597_7729_-\|tail	putative tail fiber chaperone (Assembly protein) e14 prophage	A0A0F7LDQ5	Escherichia_phage	1.3e-06	80.8
AWF23697.1\|7815_8280_-	hypothetical protein	M1TAS6	Escherichia_phage	3.0e-26	61.1
AWF23817.1\|8498_8846_-\|tail	phage tail fiber repeat family protein	U5N099	Enterobacteria_phage	6.9e-07	75.6
AWF23759.1\|9005_9236_-\|tail	phage tail fiber repeat family protein	U5N099	Enterobacteria_phage	6.8e-11	92.5
AWF23798.1\|9384_9702_-\|tail	phage tail fiber repeat family protein	U5N099	Enterobacteria_phage	2.2e-12	93.2
AWF23804.1\|9969_10938_-\|tail	phage tail fiber repeat family protein	A0A1B0V7G4	Salmonella_phage	4.6e-77	94.5
AWF23794.1\|11630_12467_-	putative pep42	A0A1B0V7F2	Salmonella_phage	8.4e-152	98.2
AWF23820.1\|12466_13900_-	putative bplA domain protein	A0A1B0VAD6	Salmonella_phage	8.2e-272	99.8
AWF23686.1\|13896_14253_-	putative pmgA	Q71TP1	Escherichia_phage	1.0e-61	100.0
AWF23706.1\|14252_17948_-	transglycosylase SLT domain protein	A0A1B0VDM8	Salmonella_phage	0.0e+00	85.9
AWF23683.1\|17959_18076_-	hypothetical protein	NA	NA	NA	NA
AWF23729.1\|18029_18911_-	putative pmgB	Q71TC9	Escherichia_phage	2.7e-172	98.6
AWF23676.1\|18925_19537_-	putative tubB	Q71TN8	Escherichia_phage	2.9e-109	99.5
AWF23790.1\|19547_20114_-	putative tubA	Q1MVL0	Enterobacteria_phage	1.1e-99	99.5
AWF23749.1\|20344_21238_+	hypothetical protein	A0A1B5FPC5	Escherichia_phage	3.4e-26	30.3
AWF23764.1\|21289_21601_-	hypothetical protein	NA	NA	NA	NA
AWF23782.1\|21788_21947_-	putative membrane protein	NA	NA	NA	NA
AWF23735.1\|22635_22857_+	putative cell division repressor	Q38557	Escherichia_phage	9.3e-26	80.3
AWF23732.1\|22853_23945_+	hypothetical protein	A0A077SLR9	Escherichia_phage	7.1e-159	79.8
AWF23679.1\|24109_24910_+	kilA-N domain protein	Q1MVK4	Enterobacteria_phage	1.9e-148	100.0
AWF23713.1\|24939_25785_+	putative replication protein repL	Q1MVK3	Enterobacteria_phage	1.8e-149	97.5
AWF23770.1\|26049_27105_+	cobQ/CobB/MinD/ParA nucleotide binding domain protein	H2BD62	Pseudomonas_phage	9.0e-143	70.8
AWF23698.1\|27751_28186_-	hypothetical protein	A0A1B0VBK8	Salmonella_phage	3.5e-77	100.0
AWF23753.1\|28519_29029_-	putative upf52.7	Q1MVJ9	Enterobacteria_phage	1.3e-91	100.0
AWF23724.1\|29040_29280_-	putative pmgG	Q71TB4	Escherichia_phage	1.3e-36	98.7
AWF23736.1\|29344_29545_+	hypothetical protein	NA	NA	NA	NA
AWF23824.1\|29657_30389_-	putative upf54.2	A0A1B0V835	Salmonella_phage	3.4e-96	98.8
AWF23808.1\|30482_32072_-	putative gp22	Q71TB2	Escherichia_phage	1.9e-301	98.5
AWF23819.1\|32132_33839_-	putative upf57.5	Q1MVJ5	Enterobacteria_phage	4.7e-311	94.4
AWF23826.1\|34065_35067_-	parB	Q38420	Escherichia_phage	4.8e-178	99.7
AWF23761.1\|35083_36232_-	plasmid partition protein A	A0A077SL49	Escherichia_phage	4.6e-217	100.0
AWF23756.1\|36837_37596_-	replication protein RepA	Q71TL8	Escherichia_phage	5.7e-139	100.0
AWF23719.1\|38024_38426_-	putative upfA	Q71TL7	Escherichia_phage	5.5e-32	54.0
AWF23755.1\|38496_38856_-	phage family protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	4.6e-38	69.1
AWF23677.1\|38867_38999_-	putative membrane lipoprotein	Q71TL6	Escherichia_phage	6.1e-17	97.7
AWF23821.1\|39033_39456_-	putative ppfA	A0A1B0VCB0	Salmonella_phage	2.7e-58	100.0
AWF23778.1\|39495_40284_-	putative upfB	A0A1B0V830	Salmonella_phage	1.7e-117	96.9
AWF23802.1\|41022_41928_+	recombination-associated protein RdgC	A0A077SK17	Escherichia_phage	1.6e-159	99.7
AWF23803.1\|41996_44189_+	DNA adenine methylase family protein	A0A077SL51	Escherichia_phage	1.8e-23	98.1
AWF23730.1\|45317_45434_+	hypothetical protein	A0A1B0VAL9	Salmonella_phage	1.1e-14	97.4
AWF23750.1\|46163_46991_+	SPFH domain / Band 7 family protein	A0A077SLJ6	Escherichia_phage	1.6e-131	100.0
AWF23710.1\|47174_47315_-	hypothetical protein	NA	NA	NA	NA
AWF23716.1\|47449_48745_+	replicative DNA helicase	O80281	Escherichia_phage	2.3e-241	99.8
AWF23777.1\|48744_49743_+	glycosyl transferases group 1 family protein	Q71TK3	Escherichia_phage	8.1e-194	99.1
AWF23796.1\|49789_50197_-	putative upf76.8	A0A077SK50	Escherichia_phage	3.5e-42	98.9
AWF23809.1\|50414_51248_-	putative upf77.7	A0A077SLQ1	Escherichia_phage	1.9e-156	99.3
AWF23703.1\|51432_52218_-	putative gp24	A0A1B0V7N6	Salmonella_phage	3.6e-144	99.6
AWF23831.1\|52204_52933_-	putative upf79.2	A0A077SK19	Escherichia_phage	9.3e-139	100.0
AWF23758.1\|52936_54154_-	putative gp25	A0A077SL53	Escherichia_phage	1.1e-224	100.0
AWF23675.1\|54163_54424_-	putative 26 protein	Q38620	Escherichia_phage	1.6e-45	100.0
AWF23691.1\|54687_54933_+	putative pmgL	Q71T86	Escherichia_phage	5.7e-40	100.0
AWF23741.1\|54935_55514_+	VRR-NUC domain protein	Q71T85	Escherichia_phage	5.7e-107	99.5
AWF23774.1\|55619_55736_+	putative hdmA	Q71TJ4	Escherichia_phage	2.8e-13	100.0
AWF23738.1\|56237_56864_+	putative pmgP	Q71T82	Escherichia_phage	6.1e-123	100.0
AWF23684.1\|56860_57538_+	serine/threonine-protein phosphatase	Q71TJ1	Escherichia_phage	1.1e-133	99.6
AWF23717.1\|57534_58236_+	putative pmgQ	Q71TJ0	Escherichia_phage	2.1e-143	99.6
AWF23779.1\|58537_59800_+	putative pmgS	Q71TI8	Escherichia_phage	9.2e-235	99.8
AWF23718.1\|59872_60379_+	putative morphogenetic protein	A0A1B0VAK0	Salmonella_phage	1.8e-93	99.4
AWF23723.1\|60429_60564_+	putative membrane protein	A0A1B0VBV0	Salmonella_phage	9.6e-18	100.0
AWF23702.1\|60573_61302_+	hypothetical protein	Q71T76	Escherichia_phage	1.7e-140	99.1
AWF23816.1\|61385_61589_+	hypothetical protein	A0A2R2Z313	Escherichia_phage	5.2e-31	94.0
AWF23789.1\|61581_61821_+	hypothetical protein	S5MQM0	Escherichia_phage	1.3e-36	97.5
AWF23797.1\|61817_62543_+	ead/Ea22-like family protein	A0A0U2QW67	Escherichia_phage	7.5e-48	49.8
AWF23793.1\|62638_62839_+	hypothetical protein	Q716F3	Shigella_phage	2.4e-36	100.0
AWF23715.1\|62840_63398_+	ead/Ea22-like family protein	A0A0N7BYR8	Escherichia_phage	5.1e-36	62.8
AWF23746.1\|63399_63663_+	hypothetical protein	A0A2P0P958	Salmonella_phage	6.7e-31	73.6
AWF23769.1\|63673_64273_+	hypothetical protein	A0A1B0V865	Salmonella_phage	7.5e-78	92.6
AWF23709.1\|64355_64589_+	hypothetical protein	A0A1B0V7L5	Salmonella_phage	1.6e-36	97.4
AWF23694.1\|64637_64760_+	putative membrane protein	A0A1B0V7K1	Salmonella_phage	1.4e-12	87.5
AWF23757.1\|64767_65061_+	putative gp44	A0A077SK23	Escherichia_phage	9.1e-45	91.8
AWF23792.1\|65067_65442_+	hypothetical protein	A0A1B0VBU7	Salmonella_phage	1.1e-66	97.6
AWF23740.1\|65438_66356_+	putative upf89.5	A0A1B0VDS6	Salmonella_phage	9.2e-176	97.7
AWF23801.1\|66352_66715_+	putative pmgV	Q71TI4	Escherichia_phage	2.2e-56	100.0
AWF23680.1\|66789_66927_-	hypothetical protein	NA	NA	NA	NA
AWF23695.1\|67227_67341_+	hypothetical protein	Q71TI1	Escherichia_phage	4.7e-10	94.6
AWF23752.1\|67376_67628_+	hot	Q71T70	Escherichia_phage	4.6e-37	94.0
AWF23704.1\|67841_68141_+	putative sOS mutagenesis and repair protein UmuD	Q1MVE7	Enterobacteria_phage	1.3e-51	100.0
AWF23678.1\|68213_68435_+	antitoxin phd	A0A222YXU1	Escherichia_phage	6.7e-32	100.0
AWF23696.1\|68434_68815_+	toxin doc	Q71T66	Escherichia_phage	1.9e-63	100.0
AWF23771.1\|68819_68999_+	putative pdcA	Q71TH5	Escherichia_phage	2.7e-23	98.3
AWF23776.1\|69026_70070_+	hypothetical protein	A0A077SLM1	Escherichia_phage	2.2e-205	98.8
AWF23692.1\|70236_70611_+	putative late promoter-activating protein	A0A1B0VDS0	Salmonella_phage	1.6e-62	99.2
AWF23823.1\|70697_71891_+	helix-turn-helix domain protein	Q5QBP3	Enterobacteria_phage	4.1e-208	99.0
AWF23744.1\|71890_73375_+\|terminase	putative large terminase protein	Q5QBP2	Enterobacteria_phage	2.5e-292	100.0
AWF23748.1\|73399_74251_-	repressor protein C1	A0A077SLM8	Escherichia_phage	6.1e-158	99.6
AWF23760.1\|75174_75396_+	putative cre-associated protein	Q5QBN7	Enterobacteria_phage	4.5e-36	100.0
AWF23734.1\|75403_76435_+	recombinase cre	Q71TG5	Escherichia_phage	2.2e-194	99.7
AWF23806.1\|77042_77603_+	recombination enhancement function protein	Q5QBN4	Enterobacteria_phage	2.3e-97	95.7
AWF23775.1\|77818_78433_+	putative maturation control protein	A0A077SK30	Escherichia_phage	2.5e-108	98.0
AWF23785.1\|78489_79797_+	SIR2-like domain protein	NA	NA	NA	NA
AWF23727.1\|79843_79981_-	modulator protein	Q71TG0	Escherichia_phage	4.7e-20	100.0
AWF23693.1\|80088_80463_-	hypothetical protein	A0A077SLF0	Escherichia_phage	2.9e-67	99.2
AWF23688.1\|80562_87219_-	SNF2 family N-terminal domain protein	Q1MVN7	Enterobacteria_phage	0.0e+00	98.6
AWF23783.1\|87405_89115_+	putative proA	Q1MVN6	Enterobacteria_phage	0.0e+00	99.6
AWF23714.1\|89212_90127_+	putative proB	Q71TR6	Escherichia_phage	6.6e-142	88.5
AWF23690.1\|90418_90976_-	lysozyme	Q71TF3	Escherichia_phage	4.2e-107	100.0
AWF23767.1\|91144_91633_+	single-stranded DNA-binding protein	A0A1B0VAF5	Salmonella_phage	1.1e-74	87.7
AWF23721.1\|91835_92624_+	putative isaA	A0A077SK34	Escherichia_phage	8.0e-144	99.2
AWF23791.1\|92616_93711_+	hypothetical protein	Q5QBP2	Enterobacteria_phage	6.7e-40	36.7
AWF23813.1\|93742_94051_-	putative odaA	O21974	Escherichia_phage	5.4e-48	97.1
AWF23754.1\|94040_97004_-	putative ddrB	A0A1B0VFX4	Salmonella_phage	0.0e+00	99.5
AWF23830.1\|97187_98336_+\|transposase	transposase, IS605 OrfB family	A0A077SL42	Escherichia_phage	5.3e-213	100.0
AWF23733.1\|98375_98717_-	putative upf26.7	A0A1B0V846	Salmonella_phage	6.9e-44	84.1
AWF23812.1\|98737_100657_-	putative darA protein	A0A1B0V7H1	Salmonella_phage	0.0e+00	98.4
AWF23707.1\|100658_101261_-	hypothetical protein	Q1MVM6	Enterobacteria_phage	5.4e-100	100.0
AWF23814.1\|101247_101691_-	putative lydB	A0A077SK09	Escherichia_phage	1.3e-82	100.0
AWF23681.1\|101687_101804_-	putative lydA	Q37876	Escherichia_phage	8.0e-13	100.0
AWF23743.1\|102790_103363_-	resolvase, N terminal domain protein	A0A0A7NPV4	Enterobacteria_phage	1.5e-83	85.6
AWF23768.1\|103393_103882_+	phage Tail Collar domain protein	M1TAS6	Escherichia_phage	1.7e-59	72.2
AWF23728.1\|103881_104484_+\|tail	caudovirales tail fiber assembly family protein	M1SV83	Escherichia_phage	2.3e-95	87.5
AWF23781.1\|104455_104872_-\|tail	caudovirales tail fiber assembly family protein	B6SCW7	Bacteriophage	4.1e-22	47.6
AWF23700.1\|104874_106983_-	hypothetical protein	A0A0F7LDR4	Escherichia_phage	1.3e-28	50.5
AWF23726.1\|107089_107395_-\|tail	phage tail fiber repeat family protein	Q71TP5	Escherichia_phage	1.2e-07	61.6
AWF23682.1\|107417_108092_-\|tail	putative major tail fiber protein S	A0A077SK37	Escherichia_phage	8.4e-102	92.4
AWF23795.1\|108103_108538_-\|tail	putative tail fiber protein R	A0A077SLL3	Escherichia_phage	3.3e-75	100.0
AWF23725.1\|108616_109453_-	putative pep42	A0A1B0V7F2	Salmonella_phage	8.4e-152	98.2
AWF23800.1\|109433_109829_-	bplA domain protein	Q71TP2	Escherichia_phage	1.4e-59	100.0
AWF23825.1\|109968_110367_-	putative pep43	Q71TP2	Escherichia_phage	2.8e-65	96.2
AWF23705.1\|110380_110776_-\|plate	putative baseplate structural protein	Q71TP2	Escherichia_phage	9.4e-53	92.4
AWF23822.1\|110919_111066_+	hypothetical protein	NA	NA	NA	NA
AWF23811.1\|111230_111548_-	hypothetical protein	A0A1B0VDM8	Salmonella_phage	6.4e-52	100.0
AWF23687.1\|111800_111947_-	sit domain protein	Q71TP0	Escherichia_phage	1.7e-12	94.3
AWF23742.1\|112686_113019_-	putative structural lytic transglycosylase domain protein	NA	NA	NA	NA
AWF23772.1\|113987_114176_-	hypothetical protein	Q71TP0	Escherichia_phage	1.9e-11	78.0
AWF23766.1\|115176_115524_-	putative pmgB	Q71TC9	Escherichia_phage	1.8e-31	100.0
AWF23763.1\|115520_115682_-	hypothetical protein	A0A077SLL9	Escherichia_phage	9.5e-12	88.2
AWF23807.1\|115835_115991_-\|tail	putative major tail tube protein	Q71TN8	Escherichia_phage	1.6e-19	100.0
AWF23799.1\|116208_116331_-	hypothetical protein	NA	NA	NA	NA
AWF23773.1\|116506_116920_-	putative tubA	Q1MVL0	Enterobacteria_phage	1.5e-61	99.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP029118

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

45205 : 89268

Acidithiobacillus_phage(18.18%)

integrase,transposase

attL 61441:61454|attR 96704:96717

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWF23855.1\|45205_46726_+\|integrase	integrase core domain protein	K4I413	Acidithiobacillus_phage	1.4e-125	46.7
AWF23955.1\|46740_47496_+	phoH-like family protein	K4HZD4	Acidithiobacillus_phage	3.4e-59	51.5
AWF23848.1\|47533_47764_-	hypothetical protein	NA	NA	NA	NA
AWF23872.1\|47766_48288_-	hypothetical protein	NA	NA	NA	NA
AWF24017.1\|48292_48901_-	hypothetical protein	NA	NA	NA	NA
AWF23927.1\|49168_50284_+	phosphoadenosine phosphosulfate reductase family protein	H7BVI4	unidentified_phage	8.3e-46	28.9
AWF23906.1\|50301_50736_+	putative membrane protein	NA	NA	NA	NA
AWF23948.1\|51772_52873_-	putative repAC protein	NA	NA	NA	NA
AWF23885.1\|52857_53145_-	hypothetical protein	NA	NA	NA	NA
AWF23961.1\|54187_55171_+	putative stbA plasmid stability protein	A7KUY1	Bacillus_phage	2.1e-08	24.4
AWF24022.1\|55623_55902_+	H-NS histone family protein	NA	NA	NA	NA
AWF23972.1\|56509_57118_-	flagellar transcriptional activator family protein	NA	NA	NA	NA
AWF24021.1\|59049_62664_-	putative traG protein	NA	NA	NA	NA
61441:61454	attL	NA	NA	NA	NA
AWF23973.1\|62676_64110_-	conjugative relaxosome accessory transposon family protein	NA	NA	NA	NA
AWF23997.1\|64111_65152_-	F plasmid transfer operon family protein	NA	NA	NA	NA
AWF23934.1\|65262_66774_-	description family protein	A0A2D1GN12	Pseudoalteromonas_phage	3.6e-44	30.7
AWF23935.1\|67060_68101_-	plasmid replication region DNA-binding N-term family protein	NA	NA	NA	NA
AWF23834.1\|68253_69129_-	DNA replication terminus site-binding family protein	NA	NA	NA	NA
AWF23959.1\|69445_69937_-	hypothetical protein	NA	NA	NA	NA
AWF23857.1\|69933_70803_-	exonuclease family protein	A0A1S6L012	Salmonella_phage	3.5e-23	35.1
AWF23853.1\|70807_71818_-\|integrase	phage integrase family protein	A0A0K0N6I5	Gordonia_phage	3.1e-07	31.9
AWF23871.1\|71820_72357_-	hypothetical protein	NA	NA	NA	NA
AWF23932.1\|72655_72937_-	hypothetical protein	NA	NA	NA	NA
AWF23905.1\|73206_73809_+	hypothetical protein	NA	NA	NA	NA
AWF24002.1\|73824_74169_-	hypothetical protein	NA	NA	NA	NA
AWF23942.1\|74447_74813_-	hypothetical protein	NA	NA	NA	NA
AWF23856.1\|74859_79113_-	RHS repeat-associated core domain protein	A0A2H4JHK7	uncultured_Caudovirales_phage	1.1e-18	47.6
AWF23983.1\|79245_79971_-	hypothetical protein	NA	NA	NA	NA
AWF23849.1\|80864_81368_+\|transposase	putative transposase	Q71TF0	Escherichia_phage	1.5e-95	100.0
AWF24000.1\|81718_82723_-\|transposase	transposase family protein	NA	NA	NA	NA
AWF23903.1\|82801_83236_-	hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
AWF24003.1\|83307_83658_+	merT mercuric transport family protein	NA	NA	NA	NA
AWF23838.1\|83671_83947_+	mercuric transport protein periplasmic component	NA	NA	NA	NA
AWF23883.1\|83982_84405_+	merC mercury resistance family protein	NA	NA	NA	NA
AWF24006.1\|84456_86151_+	mercuric reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
AWF24005.1\|86168_86531_+	mercuric resistance transcriptional repressor protein MerD	NA	NA	NA	NA
AWF23930.1\|86527_86764_+	merE family protein	NA	NA	NA	NA
AWF23946.1\|86799_87354_+	EAL domain protein	NA	NA	NA	NA
AWF23994.1\|87542_88811_+\|integrase	integrase core domain protein	NA	NA	NA	NA
AWF23945.1\|88857_89268_+\|transposase	transposase IS66 family protein	A0A077SL39	Escherichia_phage	1.9e-72	100.0
96704:96717	attR	NA	NA	NA	NA

DBSCAN-SWA_2

93468 : 136105

Escherichia_phage(40.91%)

integrase,transposase

attL 87339:87353|attR 140152:140166

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
87339:87353	attL	NA	NA	NA	NA
AWF23956.1\|93468_94026_-	transposon Tn3 resolvase	Q1MVP4	Enterobacteria_phage	2.0e-93	98.4
AWF23914.1\|94189_97195_+	hypothetical protein	Q1MVP5	Enterobacteria_phage	0.0e+00	99.5
AWF23879.1\|97234_97564_+	DDE domain protein	A0A077SL39	Escherichia_phage	2.4e-57	99.1
AWF23928.1\|97933_98461_-	hypothetical protein	A0A077SLJ7	Escherichia_phage	1.4e-91	98.9
AWF23960.1\|98553_99186_-	hypothetical protein	A0A077SLJ7	Escherichia_phage	8.5e-96	98.9
AWF23967.1\|99197_100100_-	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
AWF23979.1\|100361_101123_+	HTH domain protein	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AWF23962.1\|101143_102004_-	beta-lactamase SHV-2	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AWF23929.1\|102140_102845_+\|transposase	transposase IS66 family protein	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWF23937.1\|102995_103361_-\|transposase	transposase domain protein	NA	NA	NA	NA
AWF23947.1\|103360_104527_-\|transposase	transposase family protein	NA	NA	NA	NA
AWF23918.1\|104500_104776_+	hypothetical protein	NA	NA	NA	NA
AWF23869.1\|105078_106719_-	chaperonin GroL	A0A219YK78	uncultured_virus	8.2e-175	62.1
AWF23915.1\|106774_107065_-	10 kDa chaperonin	A0A221S322	uncultured_virus	2.1e-17	47.8
AWF23975.1\|107092_107596_+	divalent-cation tolerance CutA domain protein	NA	NA	NA	NA
AWF23902.1\|107592_108624_+	disulfide bond corrector DsbC family protein	NA	NA	NA	NA
AWF23882.1\|108634_109105_-	N-(5'phosphoribosyl)anthranilate (PRA) isomerase family protein	NA	NA	NA	NA
AWF23936.1\|109277_109643_-	bleomycin resistance protein	NA	NA	NA	NA
AWF23953.1\|109646_110459_-	beta-lactamase NDM-1	NA	NA	NA	NA
AWF23865.1\|110839_111343_+\|transposase	putative transposase	Q71TF0	Escherichia_phage	1.5e-95	100.0
AWF23860.1\|111693_112698_-\|transposase	transposase family protein	NA	NA	NA	NA
AWF23878.1\|112776_113211_-	hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
AWF23923.1\|113405_115421_-\|transposase	tn3 transposase DDE domain protein	Q1MVP5	Enterobacteria_phage	0.0e+00	99.9
AWF23861.1\|115665_116370_-\|transposase	transposase IS66 family protein	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AWF24009.1\|116360_117188_+	initiator Replication family protein	A0A218MNI2	uncultured_virus	3.9e-48	42.5
AWF23847.1\|117575_117797_+	hypothetical protein	NA	NA	NA	NA
AWF23978.1\|118155_119040_-	phosphotransferase enzyme family protein	NA	NA	NA	NA
AWF23944.1\|119095_120571_-	miro-like family protein	A0A1B0RXA0	Streptococcus_phage	2.3e-160	59.0
AWF23891.1\|120969_122145_-\|transposase	transposase DDE domain protein	A0A0F7LAS3	uncultured_marine_virus	4.5e-50	35.4
AWF24008.1\|122202_122388_+	hypothetical protein	NA	NA	NA	NA
AWF23896.1\|122869_123685_-	16S rRNA methylase	NA	NA	NA	NA
AWF23963.1\|123968_124535_-\|transposase	transposase DDE domain protein	A0A1V0E8E1	Vibrio_phage	1.6e-61	64.2
AWF24020.1\|125041_125287_-	hypothetical protein	NA	NA	NA	NA
AWF23845.1\|125618_126581_-\|transposase	transposase family protein	NA	NA	NA	NA
AWF23920.1\|126985_127825_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AWF23863.1\|128329_129109_-	nucleotidyltransferase domain protein	NA	NA	NA	NA
AWF23992.1\|129166_129280_+	hypothetical protein	NA	NA	NA	NA
AWF24013.1\|130170_131184_+\|integrase	integron integrase family protein	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AWF23995.1\|131489_132047_+	resolvase, N terminal domain protein	A0A1B0V7I5	Salmonella_phage	5.8e-48	81.3
AWF24023.1\|132400_135022_+	hypothetical protein	A0A1B0V7H9	Salmonella_phage	0.0e+00	74.9
AWF23911.1\|135100_136105_+\|transposase	transposase family protein	NA	NA	NA	NA
140152:140166	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP029115

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP029115_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029115_1

660168-660317

Orphan

Consensus_repeat	Method
CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029115_1

>merge|CP029115|1|660168-660317|CRISPRCasFinder
CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCATGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

>CP029115|1|1|660168-660317|CRISPRCasFinder
CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	TGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTTG
CGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

Protein	Signature genes	Signature genes Name	Protein_function
CP029115.1\|AWF22677.1\|666104_667124_-\|zinc-binding-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|176186
CP029115.1\|AWF23385.1\|654304_654721_+\|regulator-of-ribonuclease-activity-B	unknown	unknown	gnl\|CDD\|236876
CP029115.1\|AWF23214.1\|654766_655270_-\|acetyltransferase-domain-protein	unknown	unknown	gnl\|CDD\|366181
CP029115.1\|AWF18993.1\|664474_665977_-\|AAA-like-domain-protein	unknown	unknown	gnl\|CDD\|283518
CP029115.1\|AWF21945.1\|652812_653082_+\|hypothetical-protein	unknown	unknown	unknown
CP029115.1\|AWF20751.1\|653138_654143_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
CP029115.1\|AWF20283.1\|667625_668831_+\|integrase	unknown	unknown	gnl\|CDD\|170049
CP029115.1\|AWF19046.1\|656701_659557_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
CP029115.1\|AWF20461.1\|662089_662218_-\|hypothetical-protein	unknown	unknown	unknown
CP029115.1\|AWF20298.1\|668941_669499_+\|hypothetical-protein	unknown	unknown	unknown
CP029115.1\|AWF19341.1\|659556_660000_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
CP029115.1\|AWF22187.1\|670203_670389_-\|hypothetical-protein	unknown	unknown	unknown
CP029115.1\|AWF22380.1\|651338_652760_+\|hypothetical-protein	unknown	unknown	unknown
CP029115.1\|AWF21051.1\|660353_661865_-\|cytosol-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
CP029115.1\|AWF23002.1\|669876_670107_+\|prophage-CP4-57-regulatory-family-protein	unknown	unknown	gnl\|CDD\|225848
CP029115.1\|AWF20991.1\|655462_656650_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226719
CP029115.1\|AWF22025.1\|663231_664314_+\|lipopolysaccharide-export-system-permease-protein-LptG	unknown	unknown	gnl\|CDD\|237900
CP029115.1\|AWF21714.1\|662224_663232_+\|lipopolysaccharide-export-system-permease-protein-LptF	unknown	unknown	gnl\|CDD\|185075
CP029115.1\|AWF19403.1\|650025_650619_+\|bacterial-regulatory,-tetR-family-protein	unknown	unknown	gnl\|CDD\|224228
CP029115.1\|AWF19934.1\|650763_651216_+\|toxin-antitoxin-biofilm-protein-TabA	unknown	unknown	gnl\|CDD\|225345

Protein	Function_ID	Function_description	E-value
CP029115.1\|AWF22677.1\|666104_667124_-\|zinc-binding-dehydrogenase-family-protein	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	8.44277e-169
CP029115.1\|AWF23385.1\|654304_654721_+\|regulator-of-ribonuclease-activity-B	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	8.03891e-69
CP029115.1\|AWF23214.1\|654766_655270_-\|acetyltransferase-domain-protein	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.71083e-18
CP029115.1\|AWF18993.1\|664474_665977_-\|AAA-like-domain-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
CP029115.1\|AWF20751.1\|653138_654143_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
CP029115.1\|AWF20283.1\|667625_668831_+\|integrase	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	1.60148e-76
CP029115.1\|AWF19046.1\|656701_659557_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
CP029115.1\|AWF19934.1\|650763_651216_+\|toxin-antitoxin-biofilm-protein-TabA	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	4.50803e-70
CP029115.1\|AWF19341.1\|659556_660000_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	5.53743e-66
CP029115.1\|AWF21051.1\|660353_661865_-\|cytosol-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
CP029115.1\|AWF23002.1\|669876_670107_+\|prophage-CP4-57-regulatory-family-protein	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	2.99457e-15
CP029115.1\|AWF20991.1\|655462_656650_+\|hypothetical-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	3.73478e-110
CP029115.1\|AWF22025.1\|663231_664314_+\|lipopolysaccharide-export-system-permease-protein-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
CP029115.1\|AWF19403.1\|650025_650619_+\|bacterial-regulatory,-tetR-family-protein	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.97779e-10
CP029115.1\|AWF21714.1\|662224_663232_+\|lipopolysaccharide-export-system-permease-protein-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0

>CP029115.1|AWF19341.1|659556_660000_-|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>CP029115.1|AWF19046.1|656701_659557_-|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIDGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>CP029115.1|AWF20991.1|655462_656650_+|hypothetical-protein
MNGVNVGKDNPRHAFVFTGKGGEYFLICLVNFLLTIITLGIYGPWALVKCRRYICQHVTLKGQPFSYKGTGGAIFVSMLLIMVVYFLSISCVAGQHFVLAFLLFALLICGIPCMAVKSLQYQANMTSLNGIRFGFNCSMLRAWWVMLGLPVLLALAFWLVLYLIAQVTTSIGGLFFNLVVLSLLSVIGLGVINGITYSKWMPLLGNNATFGVHQFSIKVNVKECIKGCMLAILTMVPFIIVIGIMIAPVFQQLIMMSMLGQSEAGGELILQYYPQIMASYFLYFVAILVFASYLYVTLRSLFLNNLTLANGTIRFHSSVTTFGMLLRMLAVLMGSSITCGLAYPWLKMWMVSWIANNTHVQGDLDSLELTNDDKPQDSGPLMWISRGIMPYVPFI
>CP029115.1|AWF23214.1|654766_655270_-|acetyltransferase-domain-protein
MNVVASPALRLRKLTVADNPAIASVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLAGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLREL
>CP029115.1|AWF23385.1|654304_654721_+|regulator-of-ribonuclease-activity-B
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEEDDGVRH
>CP029115.1|AWF20751.1|653138_654143_-|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNNKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSN
>CP029115.1|AWF21945.1|652812_653082_+|hypothetical-protein
MYLNELGYVYGDEEKKEIVNKLPGYVVKIFEEKIDNELKIRTRMMETLRDGKINIYDYINEKQLEKLNPPQDLRSAIEKIGWKNRPITA
>CP029115.1|AWF22380.1|651338_652760_+|hypothetical-protein
MSKISDLNYSQHITLADNFKQKSEVLNTWRVGMNDFARNAEGQDNTRNILDPKTFLEFLVKIFTLGYVDFSKRSNEAGRNMMAHIESSSYIKNNDGSEIMKFVMNNPEGERADLSKVEIEITLSTITTMGTRQGHTAIIFPQPDGLTNRYEGKSFERKDESSLHLITNKVLACYQREANKEVALLLNNHQKLNYRQKLNNSQGLNNSQGLNNSQGLNNSQELNDSQELNDSQDLNNSQVSCKGSVDSTITDLLEKPLNNALLAIRKEHLLLMPHVCDESISYLLGEKGILEEIDKLYALNDHGIDNDKVGNNEINDIKVNLSHILIDSLDDAKVNLTPVIDSILETFSKSPYINDVRILDWCFNKSMQYFGDSEKITHACSVMSHIDFDCNQSKIAETLFFNLDKEPYKNSRELQELIWEKLVAYVNVFNLSNQEKSRLILRLFDDVKLLFNEVPVSILVNDIFLKVFFHEAT
>CP029115.1|AWF19934.1|650763_651216_+|toxin-antitoxin-biofilm-protein-TabA
MIIGNIHNLQPWLPQELRQAIEHVKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEARRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA
>CP029115.1|AWF19403.1|650025_650619_+|bacterial-regulatory,-tetR-family-protein
MVTKKQSRVPGRPRRFAPEQAVSAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLADILLDDRPVGECLVEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQSAQCVTDFMSTVMSGLSAKAREGHSIEQLCATAALAGEAIKTILKE
>CP029115.1|AWF21051.1|660353_661865_-|cytosol-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>CP029115.1|AWF20461.1|662089_662218_-|hypothetical-protein
MTEEDQKQDEEYRQLAFERLPHQISYDYHFKYARKNSSFAGF
>CP029115.1|AWF21714.1|662224_663232_+|lipopolysaccharide-export-system-permease-protein-LptF
MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>CP029115.1|AWF22025.1|663231_664314_+|lipopolysaccharide-export-system-permease-protein-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>CP029115.1|AWF18993.1|664474_665977_-|AAA-like-domain-protein
MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGIAQAGTASEKLLTRLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLTLEQQGATHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDDVDRESAYEMLQKGVQASTEQQNNPAVKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR
>CP029115.1|AWF22677.1|666104_667124_-|zinc-binding-dehydrogenase-family-protein
MSMIKSYAAKEAGGELEVYEYDPGELKPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSISGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADF
>CP029115.1|AWF20283.1|667625_668831_+|integrase
MADGGGLYLEVSPKGSKYWRMKYRRPSDKKEDRLAFGVYPTVTLAEARGKRDAAKKLLSQGIDPKAEQKGAQAEIEGAYLFETIARQWHASNLTWSEDHSRRVLLTLEQYIFPSIGQIDARTLRTSQLLNPIKAVDTAGKHDVAQRLMQRVTAIMRFGVQNDLLESNPACDMAGALLSVKATHHPALPPKRIPELLERLSRYKGRLMTRLAVELTLLTFIRSSEMRFARWSEVNFERSEWTIPGIRKPIPGVKHSERGMKMKTEHIVPLSKQAFDIFKRLHALSGKGEVIFPSDHDPKKVMSENTVNNALRVMGYDTKTEVCGHGFRTMARGALSESKLWNDDAIERQLSHVERKNVKGSYMHTSEYLEERRLMLQWWADYIDANKNGSVTPYDFARMHGK
>CP029115.1|AWF20298.1|668941_669499_+|hypothetical-protein
MNGFDYDTENDELTEVQLKEVIRLRKAITRNLQLINEYKNVSATQKVEANLLLTAAYIFQREGIVPVEIKERIENALRQQVKNKDWSDILMTLGGSELYEVGKKLRSNGRGQYRKDDEDNYSCKLIYLLIELLKRHGKVSYSDNSVIYNDIVSFCNENEILMKGVKKATFYKKIKLGKDIIKYGE
>CP029115.1|AWF23002.1|669876_670107_+|prophage-CP4-57-regulatory-family-protein
MEYANSFSDNQTLISAKEVLRRVQRSKAWLYKQLANNTFPRPVKIGTRAISFVESEVDHWIQEQIYASRGERYENH
>CP029115.1|AWF22187.1|670203_670389_-|hypothetical-protein
MATSSTNNKSQQLNARFPHDVVAELESNLEDGETKAQFIVTAVKGEIKRRQRRKNKPEQGS

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Crispr_ID: CP029115_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029115_3

1439634-1439730

Orphan

Consensus_repeat	Method
GCTTGACGCGTCTTATCAGGCCTACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029115_3

>merge|CP029115|3|1439634-1439730|CRISPRCasFinder
GCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACAATGCCTGATGCGATGCTTGACGCATCTTATCAGGCCTACAA

>CP029115|3|3|1439634-1439730|CRISPRCasFinder
GCTTGACGCGTCTTATCAGGCCTACAA	CCGGTGCCGCATCCGGCAATTGGTGCACAATGCCTGATGCGAT
GCTTGACGCATCTTATCAGGCCTACAA

Protein	Signature genes	Signature genes Name	Protein_function
CP029115.1\|AWF22505.1\|1427414_1428776_+\|allantoinase	unknown	unknown	gnl\|CDD\|169193
CP029115.1\|AWF22520.1\|1431528_1432314_-\|mif2/CENP-C-like-family-protein	unknown	unknown	gnl\|CDD\|200251
CP029115.1\|AWF22012.1\|1433581_1434631_-\|ureidoglycolate-dehydrogenase	unknown	unknown	gnl\|CDD\|184985
CP029115.1\|AWF19297.1\|1438706_1439600_+\|carbamate-kinase	unknown	unknown	gnl\|CDD\|181831
CP029115.1\|AWF20338.1\|1440858_1441368_-\|N5-carboxyaminoimidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|223119
CP029115.1\|AWF19175.1\|1430155_1431301_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|182152
CP029115.1\|AWF21996.1\|1442210_1442705_-\|peptidyl-prolyl-cis-trans-isomerase-B	unknown	unknown	gnl\|CDD\|182734
CP029115.1\|AWF23375.1\|1445142_1446009_-\|bifunctional-protein-FolD	unknown	unknown	gnl\|CDD\|236760
CP029115.1\|AWF22712.1\|1442878_1444264_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
CP029115.1\|AWF20035.1\|1437894_1438710_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378658
CP029115.1\|AWF20456.1\|1444299_1444821_-\|inner-membrane-protein-YbcI	unknown	unknown	gnl\|CDD\|224899
CP029115.1\|AWF23238.1\|1434947_1436615_+\|protein-FdrA	unknown	unknown	gnl\|CDD\|180395
CP029115.1\|AWF19583.1\|1428832_1430134_+\|putative-purine-permease-YbbY	unknown	unknown	gnl\|CDD\|183124
CP029115.1\|AWF18912.1\|1432324_1433560_-\|allantoate-amidohydrolase	unknown	unknown	gnl\|CDD\|274471
CP029115.1\|AWF23139.1\|1444928_1445141_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183166
CP029115.1\|AWF21272.1\|1446479_1447022_+\|type-1-fimbrial-protein,-A-chain	unknown	unknown	gnl\|CDD\|237920
CP029115.1\|AWF22490.1\|1439794_1440862_-\|phosphoribosylaminoimidazole-carboxylase,-ATPase-subunit	unknown	unknown	gnl\|CDD\|235674
CP029115.1\|AWF21425.1\|1436624_1437884_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377673
CP029115.1\|AWF19369.1\|1447241_1447934_+\|gram-negative-pili-assembly-chaperone,-C-terminal-domain-protein	unknown	unknown	gnl\|CDD\|185117
CP029115.1\|AWF22588.1\|1441485_1442208_-\|UDP-2,3-diacylglucosamine-hydrolase	unknown	unknown	gnl\|CDD\|235420

Protein	Function_ID	Function_description	E-value
CP029115.1\|AWF22505.1\|1427414_1428776_+\|allantoinase	gnl\|CDD\|169193	PRK08044, PRK08044, allantoinase AllB.	0
CP029115.1\|AWF22520.1\|1431528_1432314_-\|mif2/CENP-C-like-family-protein	gnl\|CDD\|200251	TIGR03214, ura-cupin, putative allantoin catabolism protein. This model represents a protein containing a tandem arrangement of cupin domains (N-terminal part of pfam07883 and C-terminal more distantly related to pfam00190). This protein is found in the vicinity of genes involved in the catabolism of allantoin, a breakdown product of urate and sometimes of urate iteslf. The distribution of pathway components in the genomes in which this family is observed suggests that the function is linked to the allantoate catabolism to glyoxylate pathway (GenProp0686) since it is sometimes found in genomes lacking any elements of the xanthine-to-allantoin pathways (e.g. in Enterococcus faecalis).	2.39799e-151
CP029115.1\|AWF22012.1\|1433581_1434631_-\|ureidoglycolate-dehydrogenase	gnl\|CDD\|184985	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional.	0
CP029115.1\|AWF19297.1\|1438706_1439600_+\|carbamate-kinase	gnl\|CDD\|181831	PRK09411, PRK09411, carbamate kinase; Reviewed.	0
CP029115.1\|AWF20338.1\|1440858_1441368_-\|N5-carboxyaminoimidazole-ribonucleotide-mutase	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	1.14024e-91
CP029115.1\|AWF19175.1\|1430155_1431301_+\|glycerate-kinase	gnl\|CDD\|182152	PRK09932, PRK09932, glycerate 3-kinase.	0
CP029115.1\|AWF21996.1\|1442210_1442705_-\|peptidyl-prolyl-cis-trans-isomerase-B	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	9.12357e-121
CP029115.1\|AWF23375.1\|1445142_1446009_-\|bifunctional-protein-FolD	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
CP029115.1\|AWF22712.1\|1442878_1444264_+\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
CP029115.1\|AWF20035.1\|1437894_1438710_+\|hypothetical-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	3.47659e-37
CP029115.1\|AWF20456.1\|1444299_1444821_-\|inner-membrane-protein-YbcI	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	1.2285e-30
CP029115.1\|AWF23238.1\|1434947_1436615_+\|protein-FdrA	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	0
CP029115.1\|AWF19583.1\|1428832_1430134_+\|putative-purine-permease-YbbY	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	0
CP029115.1\|AWF18912.1\|1432324_1433560_-\|allantoate-amidohydrolase	gnl\|CDD\|274471	TIGR03176, AllC, allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea. [Central intermediary metabolism, Nitrogen metabolism].	0
CP029115.1\|AWF23139.1\|1444928_1445141_-\|hypothetical-protein	gnl\|CDD\|183166	PRK11507, PRK11507, ribosome-associated protein YbcJ.	1.38756e-42
CP029115.1\|AWF21272.1\|1446479_1447022_+\|type-1-fimbrial-protein,-A-chain	gnl\|CDD\|237920	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA.	9.67411e-92
CP029115.1\|AWF22490.1\|1439794_1440862_-\|phosphoribosylaminoimidazole-carboxylase,-ATPase-subunit	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	2.50904e-178
CP029115.1\|AWF21425.1\|1436624_1437884_+\|hypothetical-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.27269e-131
CP029115.1\|AWF19369.1\|1447241_1447934_+\|gram-negative-pili-assembly-chaperone,-C-terminal-domain-protein	gnl\|CDD\|185117	PRK15195, PRK15195, molecular chaperone FimC.	4.4332e-149
CP029115.1\|AWF22588.1\|1441485_1442208_-\|UDP-2,3-diacylglucosamine-hydrolase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	2.41122e-165

>CP029115.1|AWF19297.1|1438706_1439600_+|carbamate-kinase
MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTDDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSRGKPAWIGALSRIEETLAGEAGTCISL
>CP029115.1|AWF20035.1|1437894_1438710_+|hypothetical-protein
MTIIHPLLASSSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRPFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP
>CP029115.1|AWF21425.1|1436624_1437884_+|hypothetical-protein
MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPSWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG
>CP029115.1|AWF23238.1|1434947_1436615_+|protein-FdrA
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALMQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLSPAAQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
>CP029115.1|AWF22012.1|1433581_1434631_-|ureidoglycolate-dehydrogenase
MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQNGVAVVGISRMGHSGAISYFVQQAARAGFIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEILTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGVPTTDPFAVHALLPAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSSELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ
>CP029115.1|AWF18912.1|1432324_1433560_-|allantoate-amidohydrolase
MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCEREKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK
>CP029115.1|AWF22520.1|1431528_1432314_-|mif2/CENP-C-like-family-protein
MGYLNNVTGYREDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGYAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI
>CP029115.1|AWF19175.1|1430155_1431301_+|glycerate-kinase
MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADGGEGTVDAMVAATGGNIVTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRHALDNDIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQALAANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN
>CP029115.1|AWF19583.1|1428832_1430134_+|putative-purine-permease-YbbY
MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVMCLVLAMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE
>CP029115.1|AWF22505.1|1427414_1428776_+|allantoinase
MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILKHQQ
>CP029115.1|AWF22490.1|1439794_1440862_-|phosphoribosylaminoimidazole-carboxylase,-ATPase-subunit
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG
>CP029115.1|AWF20338.1|1440858_1441368_-|N5-carboxyaminoimidazole-ribonucleotide-mutase
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
>CP029115.1|AWF22588.1|1441485_1442208_-|UDP-2,3-diacylglucosamine-hydrolase
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRKMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
>CP029115.1|AWF21996.1|1442210_1442705_-|peptidyl-prolyl-cis-trans-isomerase-B
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE
>CP029115.1|AWF22712.1|1442878_1444264_+|cysteine--tRNA-ligase
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK
>CP029115.1|AWF20456.1|1444299_1444821_-|inner-membrane-protein-YbcI
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGFTHSLVFVFVVPLLCVFIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLPGMLLMGMLWWRRR
>CP029115.1|AWF23139.1|1444928_1445141_-|hypothetical-protein
MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
>CP029115.1|AWF23375.1|1445142_1446009_-|bifunctional-protein-FolD
MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE
>CP029115.1|AWF21272.1|1446479_1447022_+|type-1-fimbrial-protein,-A-chain
MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE
>CP029115.1|AWF19369.1|1447241_1447934_+|gram-negative-pili-assembly-chaperone,-C-terminal-domain-protein
MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN

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Crispr_ID: CP029115_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029115_4

3227672-3227798

Orphan

Consensus_repeat	Method
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029115_4

>merge|CP029115|4|3227672-3227798|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

>CP029115|4|4|3227672-3227798|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	TCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGA
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

Protein	Signature genes	Signature genes Name	Protein_function
CP029115.1\|AWF20269.1\|3227854_3228985_+\|ribonucleoside-diphosphate-reductase-1-subunit-beta	unknown	unknown	gnl\|CDD\|181647
CP029115.1\|AWF20081.1\|3208618_3210268_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227732
CP029115.1\|AWF23059.1\|3215426_3217115_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227030
CP029115.1\|AWF21351.1\|3225335_3227621_+\|ribonucleoside-diphosphate-reductase,-alpha-subunit	unknown	unknown	gnl\|CDD\|181649
CP029115.1\|AWF21448.1\|3220887_3224640_-\|outer-membrane-autotransporter-barrel-domain-protein	unknown	unknown	gnl\|CDD\|182059
CP029115.1\|AWF22515.1\|3207837_3208614_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227021
CP029115.1\|AWF22492.1\|3235991_3237182_+\|glycerol-3-phosphate-dehydrogenase,-anaerobic,-C-subunit	unknown	unknown	gnl\|CDD\|132422
CP029115.1\|AWF21200.1\|3214806_3215430_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225774
CP029115.1\|AWF19726.1\|3210268_3214783_-\|PKD-domain-protein	unknown	unknown	gnl\|CDD\|225248
CP029115.1\|AWF23148.1\|3230157_3230364_+\|putative-yfaH	unknown	unknown	gnl\|CDD\|182050
CP029115.1\|AWF21626.1\|3220037_3220760_+\|3-demethylubiquinone-9-3-O-methyltransferase	unknown	unknown	gnl\|CDD\|235350
CP029115.1\|AWF21764.1\|3206579_3207764_+\|acetyl-CoA-C-acetyltransferase-family-protein	unknown	unknown	gnl\|CDD\|180261
CP029115.1\|AWF23351.1\|3237206_3237332_+\|hypothetical-protein	unknown	unknown	unknown
CP029115.1\|AWF20988.1\|3229292_3229943_-\|lipopolysaccharide-kinase-family-protein	unknown	unknown	gnl\|CDD\|182136
CP029115.1\|AWF20181.1\|3230405_3231356_-\|glycerophosphoryl-diester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
CP029115.1\|AWF23024.1\|3231486_3232845_-\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
CP029115.1\|AWF20159.1\|3233117_3234746_+\|glycerol-3-phosphate-dehydrogenase,-anaerobic,-A-subunit	unknown	unknown	gnl\|CDD\|236847
CP029115.1\|AWF22618.1\|3217263_3219891_-\|DNA-gyrase,-A-subunit	unknown	unknown	gnl\|CDD\|235502
CP029115.1\|AWF22461.1\|3228984_3229239_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-protein	unknown	unknown	gnl\|CDD\|182668
CP029115.1\|AWF23525.1\|3234735_3235995_+\|glycerol-3-phosphate-dehydrogenase,-anaerobic,-B-subunit	unknown	unknown	gnl\|CDD\|225617

Protein	Function_ID	Function_description	E-value
CP029115.1\|AWF20269.1\|3227854_3228985_+\|ribonucleoside-diphosphate-reductase-1-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
CP029115.1\|AWF20081.1\|3208618_3210268_-\|hypothetical-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	8.04949e-127
CP029115.1\|AWF23059.1\|3215426_3217115_-\|hypothetical-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
CP029115.1\|AWF21351.1\|3225335_3227621_+\|ribonucleoside-diphosphate-reductase,-alpha-subunit	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
CP029115.1\|AWF21448.1\|3220887_3224640_-\|outer-membrane-autotransporter-barrel-domain-protein	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
CP029115.1\|AWF22515.1\|3207837_3208614_-\|hypothetical-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	4.17009e-153
CP029115.1\|AWF22492.1\|3235991_3237182_+\|glycerol-3-phosphate-dehydrogenase,-anaerobic,-C-subunit	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
CP029115.1\|AWF21200.1\|3214806_3215430_-\|hypothetical-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	7.99004e-141
CP029115.1\|AWF19726.1\|3210268_3214783_-\|PKD-domain-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
CP029115.1\|AWF23148.1\|3230157_3230364_+\|putative-yfaH	gnl\|CDD\|182050	PRK09729, PRK09729, hypothetical protein; Provisional.	1.13329e-36
CP029115.1\|AWF21626.1\|3220037_3220760_+\|3-demethylubiquinone-9-3-O-methyltransferase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.65303e-171
CP029115.1\|AWF21764.1\|3206579_3207764_+\|acetyl-CoA-C-acetyltransferase-family-protein	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
CP029115.1\|AWF20988.1\|3229292_3229943_-\|lipopolysaccharide-kinase-family-protein	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	2.86156e-158
CP029115.1\|AWF20181.1\|3230405_3231356_-\|glycerophosphoryl-diester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
CP029115.1\|AWF23024.1\|3231486_3232845_-\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
CP029115.1\|AWF20159.1\|3233117_3234746_+\|glycerol-3-phosphate-dehydrogenase,-anaerobic,-A-subunit	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
CP029115.1\|AWF22618.1\|3217263_3219891_-\|DNA-gyrase,-A-subunit	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
CP029115.1\|AWF22461.1\|3228984_3229239_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-protein	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
CP029115.1\|AWF23525.1\|3234735_3235995_+\|glycerol-3-phosphate-dehydrogenase,-anaerobic,-B-subunit	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0

>CP029115.1|AWF21351.1|3225335_3227621_+|ribonucleoside-diphosphate-reductase,-alpha-subunit
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>CP029115.1|AWF21448.1|3220887_3224640_-|outer-membrane-autotransporter-barrel-domain-protein
MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>CP029115.1|AWF21626.1|3220037_3220760_+|3-demethylubiquinone-9-3-O-methyltransferase
MNAEKSPVNHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK
>CP029115.1|AWF22618.1|3217263_3219891_-|DNA-gyrase,-A-subunit
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDLAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>CP029115.1|AWF23059.1|3215426_3217115_-|hypothetical-protein
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERTAEKTPVRQRIVVSARWLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGIAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>CP029115.1|AWF21200.1|3214806_3215430_-|hypothetical-protein
MRHGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>CP029115.1|AWF19726.1|3210268_3214783_-|PKD-domain-protein
MGTGLANADDSLPSSNYAPPAGGTFFLLADSSFSSSEEAKVRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVKQFRYPLWQAKPFEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGKELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVIGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALAKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGENALILPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQALGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQTAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPALAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWREPAKMAQQSNIPVTVERQLYRLIPGEEEMSFILQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAAGSEWTGMQVK
>CP029115.1|AWF20081.1|3208618_3210268_-|hypothetical-protein
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVNPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTWARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>CP029115.1|AWF22515.1|3207837_3208614_-|hypothetical-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>CP029115.1|AWF21764.1|3206579_3207764_+|acetyl-CoA-C-acetyltransferase-family-protein
MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKANSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN
>CP029115.1|AWF20269.1|3227854_3228985_+|ribonucleoside-diphosphate-reductase-1-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
>CP029115.1|AWF22461.1|3228984_3229239_+|2Fe-2S-iron-sulfur-cluster-binding-domain-protein
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>CP029115.1|AWF20988.1|3229292_3229943_-|lipopolysaccharide-kinase-family-protein
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>CP029115.1|AWF23148.1|3230157_3230364_+|putative-yfaH
MNFIRQGLGIALQPELTLKSIAGELCSVPLEPTFYRQISLLAKEKPVEGSPLFLLQMCMEQLVAIGKI
>CP029115.1|AWF20181.1|3230405_3231356_-|glycerophosphoryl-diester-phosphodiesterase
MPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>CP029115.1|AWF23024.1|3231486_3232845_-|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQERNGG
>CP029115.1|AWF20159.1|3233117_3234746_+|glycerol-3-phosphate-dehydrogenase,-anaerobic,-A-subunit
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>CP029115.1|AWF23525.1|3234735_3235995_+|glycerol-3-phosphate-dehydrogenase,-anaerobic,-B-subunit
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYSLLEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>CP029115.1|AWF22492.1|3235991_3237182_+|glycerol-3-phosphate-dehydrogenase,-anaerobic,-C-subunit
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRNIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>CP029115.1|AWF23351.1|3237206_3237332_+|hypothetical-protein
MWLPGIFAYTIPCPMYALQRSENSSENVSQRLKLADVKGLG

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Crispr_ID: CP029115_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029115_5

3723540-3724241

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	PILER-CR

11 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of CP029115_5

>merge|CP029115|5|3723540-3724241|CRISPRCasFinder,CRT,PILER-CR
CGGTTTATCCCCGCTGATGCGGGGAACACCAGCGTCAGGCGTGAAATCTCACCGTCGTTGCCGGTTTATCCCTGCTGGCGCGGGGAACTCTCGGTTCAGGCGTTGCAAACCTGGCTACCGGGCGGTTTATCCCCGCTAACGCGGGGAACTCGTAGTCCATCATTCCACCTATGTCTGAACTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCATCGTCCATATTAACAATCGTGGTGAGTTCAACGGTTTATCCCCGCTGGCGCGGGGAACTCACTATGGCCCCGGCAAAAAACGCGCTGGTGGGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTC

>CP029115|5|5|3723540-3724241|CRISPRCasFinder
CGGTTTATCCCCGCTGATGCGGGGAACAC	CAGCGTCAGGCGTGAAATCTCACCGTCGTTGC
CGGTTTATCCCTGCTGGCGCGGGGAACTC	TCGGTTCAGGCGTTGCAAACCTGGCTACCGGG
CGGTTTATCCCCGCTAACGCGGGGAACTC	GTAGTCCATCATTCCACCTATGTCTGAACTCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CCGGGGGATAATGTTTACGGTCATGCGCCCCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATCGTCCATATTAACAATCGTGGTGAGTTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACTATGGCCCCGGCAAAAAACGCGCTGGTGGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AAGCTGGCTGGCAATCTCTTTCGGGGTGAGTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TAGTTTCCGTATCTCCGGATTTATAAAGCTGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCAGGCGGCGACGCGCAGGGTATGCGCGATTCG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCGACCGCTCAGAAATTCCAGACCCGATCCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC

>CP029115|5|1|3723540-3724241|CRT
CGGTTTATCCCCGCTGATGCGGGGAACAC	CAGCGTCAGGCGTGAAATCTCACCGTCGTTGC
CGGTTTATCCCTGCTGGCGCGGGGAACTC	TCGGTTCAGGCGTTGCAAACCTGGCTACCGGG
CGGTTTATCCCCGCTAACGCGGGGAACTC	GTAGTCCATCATTCCACCTATGTCTGAACTCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CCGGGGGATAATGTTTACGGTCATGCGCCCCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATCGTCCATATTAACAATCGTGGTGAGTTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACTATGGCCCCGGCAAAAAACGCGCTGGTGGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AAGCTGGCTGGCAATCTCTTTCGGGGTGAGTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TAGTTTCCGTATCTCCGGATTTATAAAGCTGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCAGGCGGCGACGCGCAGGGTATGCGCGATTCG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCGACCGCTCAGAAATTCCAGACCCGATCCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC

>CP029115|5|1|3723723-3724241|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CCGGGGGATAATGTTTACGGTCATGCGCCCCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATCGTCCATATTAACAATCGTGGTGAGTTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACTATGGCCCCGGCAAAAAACGCGCTGGTGGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AAGCTGGCTGGCAATCTCTTTCGGGGTGAGTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TAGTTTCCGTATCTCCGGATTTATAAAGCTGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCAGGCGGCGACGCGCAGGGTATGCGCGATTCG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCGACCGCTCAGAAATTCCAGACCCGATCCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC

Protein	Signature genes	Signature genes Name	Protein_function
CP029115.1\|AWF19253.1\|3719225_3719831_-\|adenylylsulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP029115.1\|AWF22441.1\|3730330_3732997_-\|CRISPR-associated-endonuclease/helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
CP029115.1\|AWF23196.1\|3726151_3726646_-\|CRISPR-associated-protein-Cas5/CasD,-subtype-I-E	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
CP029115.1\|AWF20108.1\|3728407_3729790_-\|CRISPR-associated-protein-CasA/Cse1	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|236613
CP029115.1\|AWF19194.1\|3726828_3727920_-\|CRISPR-associated-protein-Cas7/Cse4/CasC,-subtype-I-E	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
CP029115.1\|AWF20802.1\|3727932_3728415_-\|CRISPR-associated-protein-CasB/Cse2	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|187801
CP029115.1\|AWF21880.1\|3725565_3726165_-\|CRISPR-associated-protein-Cas6/Cse3/CasE,-subtype-I-E	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
CP029115.1\|AWF21842.1\|3718852_3719176_-\|inner-membrane-protein-YgbE	unknown	unknown	gnl\|CDD\|371891
CP029115.1\|AWF22551.1\|3724632_3725550_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP029115.1\|AWF23283.1\|3729912_3730032_-\|hypothetical-protein	unknown	unknown	unknown
CP029115.1\|AWF23414.1\|3716093_3717143_-\|tRNA-pseudouridine-synthase-D	unknown	unknown	gnl\|CDD\|234884
CP029115.1\|AWF23616.1\|3719830_3721258_-\|sulfate-adenylyltransferase,-large-subunit	unknown	unknown	gnl\|CDD\|235349
CP029115.1\|AWF23478.1\|3722419_3723457_+\|M42-glutamyl-aminopeptidase-family-protein	unknown	unknown	gnl\|CDD\|182299
CP029115.1\|AWF20457.1\|3724346_3724508_-\|CRISPR-associated-endoribonuclease-Cas2,-subtype-I-E	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP029115.1\|AWF22981.1\|3715351_3716113_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP029115.1\|AWF22324.1\|3717618_3718329_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP029115.1\|AWF18960.1\|3718347_3718659_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP029115.1\|AWF19986.1\|3717139_3717619_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP029115.1\|AWF19103.1\|3721259_3722168_-\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP029115.1\|AWF23571.1\|3733355_3734090_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997

Protein	Function_ID	Function_description	E-value
CP029115.1\|AWF19253.1\|3719225_3719831_-\|adenylylsulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
CP029115.1\|AWF22441.1\|3730330_3732997_-\|CRISPR-associated-endonuclease/helicase-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	0
CP029115.1\|AWF23196.1\|3726151_3726646_-\|CRISPR-associated-protein-Cas5/CasD,-subtype-I-E	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	3.44475e-70
CP029115.1\|AWF20108.1\|3728407_3729790_-\|CRISPR-associated-protein-CasA/Cse1	gnl\|CDD\|236613	PRK09693, PRK09693, Cascade antiviral complex protein; Validated.	0
CP029115.1\|AWF19194.1\|3726828_3727920_-\|CRISPR-associated-protein-Cas7/Cse4/CasC,-subtype-I-E	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	5.43824e-154
CP029115.1\|AWF20802.1\|3727932_3728415_-\|CRISPR-associated-protein-CasB/Cse2	gnl\|CDD\|187801	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.76293e-33
CP029115.1\|AWF21880.1\|3725565_3726165_-\|CRISPR-associated-protein-Cas6/Cse3/CasE,-subtype-I-E	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.81669e-101
CP029115.1\|AWF21842.1\|3718852_3719176_-\|inner-membrane-protein-YgbE	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
CP029115.1\|AWF22551.1\|3724632_3725550_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	2.68794e-159
CP029115.1\|AWF23414.1\|3716093_3717143_-\|tRNA-pseudouridine-synthase-D	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP029115.1\|AWF23616.1\|3719830_3721258_-\|sulfate-adenylyltransferase,-large-subunit	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP029115.1\|AWF23478.1\|3722419_3723457_+\|M42-glutamyl-aminopeptidase-family-protein	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP029115.1\|AWF20457.1\|3724346_3724508_-\|CRISPR-associated-endoribonuclease-Cas2,-subtype-I-E	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	7.8123e-31
CP029115.1\|AWF22981.1\|3715351_3716113_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
CP029115.1\|AWF22324.1\|3717618_3718329_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
CP029115.1\|AWF18960.1\|3718347_3718659_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
CP029115.1\|AWF19986.1\|3717139_3717619_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
CP029115.1\|AWF19103.1\|3721259_3722168_-\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP029115.1\|AWF23571.1\|3733355_3734090_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.39575e-137

>CP029115.1|AWF23478.1|3722419_3723457_+|M42-glutamyl-aminopeptidase-family-protein
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTPAFPAGNSWHDVRLDNHQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>CP029115.1|AWF19103.1|3721259_3722168_-|sulfate-adenylyltransferase-subunit-2
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>CP029115.1|AWF23616.1|3719830_3721258_-|sulfate-adenylyltransferase,-large-subunit
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>CP029115.1|AWF19253.1|3719225_3719831_-|adenylylsulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>CP029115.1|AWF21842.1|3718852_3719176_-|inner-membrane-protein-YgbE
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>CP029115.1|AWF18960.1|3718347_3718659_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>CP029115.1|AWF22324.1|3717618_3718329_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>CP029115.1|AWF19986.1|3717139_3717619_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>CP029115.1|AWF23414.1|3716093_3717143_-|tRNA-pseudouridine-synthase-D
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>CP029115.1|AWF22981.1|3715351_3716113_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>CP029115.1|AWF20457.1|3724346_3724508_-|CRISPR-associated-endoribonuclease-Cas2,-subtype-I-E
MIWEQIAGLAEEGNVVMAWATNTETGFEFQTFGLNRRTPVDLDGLRLVSFLPV
>CP029115.1|AWF22551.1|3724632_3725550_-|CRISPR-associated-endonuclease-Cas1
MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
>CP029115.1|AWF21880.1|3725565_3726165_-|CRISPR-associated-protein-Cas6/Cse3/CasE,-subtype-I-E
MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVLTINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
>CP029115.1|AWF23196.1|3726151_3726646_-|CRISPR-associated-protein-Cas5/CasD,-subtype-I-E
MQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ
>CP029115.1|AWF19194.1|3726828_3727920_-|CRISPR-associated-protein-Cas7/Cse4/CasC,-subtype-I-E
MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSGYYAQNIGESSLRTIHLAQLRDVLRQKLGERFDQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKVLKEDIAAIRVNLQQGVDIALSGRMATSGMMTELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLGGASREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKAKDGFLQPSIQAFNQYWDRVANGYGLNGAAAQFSLSDVDPITAQVKQMPTLEQLKSWVRNNGEA
>CP029115.1|AWF20802.1|3727932_3728415_-|CRISPR-associated-protein-CasB/Cse2
MADEIDAMALYRAWQQLDNGSCAQIRRVSEPDELRDIPAFYRLVQPFGWENPRHQQALLRMVFCLSAGKNVIRHQDKKSEQTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRLLTHAEPVLDWPLMARMLTWWGKRERQQLLEDFVLTTNKNA
>CP029115.1|AWF20108.1|3728407_3729790_-|CRISPR-associated-protein-CasA/Cse1
MELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPVTTFVRGIDLRSTVLLNVLTLPRLQKQFPNESHTENQPTWIKPIKSNESIPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG
>CP029115.1|AWF23283.1|3729912_3730032_-|hypothetical-protein
MNVIIELITPYFFFVFTDNGSVPTYRNAGEMSEHMKENK
>CP029115.1|AWF22441.1|3730330_3732997_-|CRISPR-associated-endonuclease/helicase-Cas3
MEPFKYICHYWGKSSKSLTKGNDIHLLIYHCLDVAAVADCWWDQSVVLQNTFCRNEMLSKQRVKAWLLFFIALHDIGKFDIRFQYKSAESWLKLNPATPSLNGPSTQMCRKFNHGAAGLYWFNQDSLSEQSLGDFFSFFDAAPHPYESWFPWVEAVTGHHGFILHSQDQDKSRWEMPASLASYAAQDKQAREEWISVLEALFLTPAGLSINDIPPDCSSLLAGFCSLADWLGSWTTTNTFLFNEDAPSDINALRTYFQDRQQDASRVLELSGLVSNKRCYEGVHALLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVENNSAYPLINWRGVNGAQRFDLLAHPEQLPPRFSIQPEPIYLADMLPDLTMLERMIAAANAGAQACLICNLVDVAQVCYQRLKELNNTQVDIDLFHARFTLNDRREKENRVISNFGKNGKRNVGRILVATQVVEQSLDVDFDWLITQHCPADLLFQRLGRLHRHHRKYRPAGFEIPVATILLPDGEGYGRHEHIYSNVRVMWRTQQHIEELNGASLFFPDAYRQWLDSIYDDAEMDEPEWVGNGMDKFESAECEKRFKARKVLQWAEEYSLQDNDETILAVTRDGEMSLPLLPYVQTSSGKQLLDGQVYEDLSHEQQYEALALNRVNVPFTWKRSFSEVVDEDGLLWLEGKQNLDGWVWQGNSIVITYTGDEGMTRVIPANPK
>CP029115.1|AWF23571.1|3733355_3734090_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG

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Crispr_ID: CP029115_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029115_6

3749790-3750124

Unclear

I-E

Consensus_repeat	Method
TCGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
GGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
GGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

5 spacers

The CRISPR arrays of CP029115_6

>merge|CP029115|6|3749790-3750124|CRISPRCasFinder,CRT,PILER-CR
GTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACCCATGACCACGTCGGTTTATCCCCGCTGGCGCGGGGAACACGAAATACTGGTGAGCGTTAATGCCGCAAACACAGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP029115|6|6|3749790-3750124|CRISPRCasFinder
GTGGTTTATCCCCGCTGGCGCGGGGAACTC	GACAGAACGGCCTCAGTAGTCTCGTCAGGCT
CCGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTTTTCGCAAATCTATGGACTATTGCTAT
TCGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGCACGGAATACAAAGCCGTGTATCTGC
TCGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGCTCTGCAACAGCAGCACCCATGACCACG
TCGGTTTATCCCCGCTGGCGCGGGGAACAC	GAAATACTGGTGAGCGTTAATGCCGCAAACA
CAGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP029115|6|2|3749792-3750124|CRT
GGTTTATCCCCGCTGGCGCGGGGAACTC	GACAGAACGGCCTCAGTAGTCTCGTCAGGCTCC
GGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTTTTCGCAAATCTATGGACTATTGCTATTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGCACGGAATACAAAGCCGTGTATCTGCTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	TGGCTCTGCAACAGCAGCACCCATGACCACGTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GAAATACTGGTGAGCGTTAATGCCGCAAACACA
GGTTTATCCCCGCTGGCGCGGGGAACAC

>CP029115|6|2|3749853-3750124|PILER-CR
GGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTTTTCGCAAATCTATGGACTATTGCTATTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGCACGGAATACAAAGCCGTGTATCTGCTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	TGGCTCTGCAACAGCAGCACCCATGACCACGTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GAAATACTGGTGAGCGTTAATGCCGCAAACACA
GGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
CP029115.1\|AWF23190.1\|3751427_3752300_+\|repair-family-protein	unknown	unknown	gnl\|CDD\|224429
CP029115.1\|AWF23182.1\|3738434_3739706_+\|HI0933-like-family-protein	unknown	unknown	gnl\|CDD\|182194
CP029115.1\|AWF20360.1\|3759415_3760717_-\|23S-rRNA-(uracil-5-)-methyltransferase-RumA	unknown	unknown	gnl\|CDD\|237291
CP029115.1\|AWF21640.1\|3739696_3739957_+\|putative-4Fe-4S-binding-protein	unknown	unknown	gnl\|CDD\|225289
CP029115.1\|AWF21985.1\|3755610_3756402_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP029115.1\|AWF20528.1\|3753745_3755383_-\|CTP-synthase	unknown	unknown	gnl\|CDD\|235437
CP029115.1\|AWF19814.1\|3757133_3759368_-\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
CP029115.1\|AWF19727.1\|3746369_3747647_+\|inner-membrane-protein-YqcE	unknown	unknown	gnl\|CDD\|349949
CP029115.1\|AWF19642.1\|3756472_3756808_-\|mRNA-interferase-MazF	unknown	unknown	gnl\|CDD\|182138
CP029115.1\|AWF19592.1\|3747673_3749152_+\|FGGY-family-of-carbohydrate-kinase,-N-terminal-domain-protein	unknown	unknown	gnl\|CDD\|212662
CP029115.1\|AWF21639.1\|3751273_3751414_+\|hypothetical-protein	unknown	unknown	unknown
CP029115.1\|AWF21281.1\|3743741_3745196_-\|FAD-binding-domain-protein	unknown	unknown	gnl\|CDD\|223354
CP029115.1\|AWF21299.1\|3741553_3742333_-\|electron-transfer-flavodomain-protein	unknown	unknown	gnl\|CDD\|224997
CP029115.1\|AWF21818.1\|3745265_3746051_-\|KR-domain-protein	unknown	unknown	gnl\|CDD\|187605
CP029115.1\|AWF23084.1\|3739973_3740549_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224865
CP029115.1\|AWF21492.1\|3742310_3743648_-\|inner-membrane-metabolite-transport-protein-YgcS	unknown	unknown	gnl\|CDD\|340929
CP029115.1\|AWF21245.1\|3750463_3751135_-\|putative-7-cyano-7-deazaguanosine-(preQ0)-biosynthesis-protein-QueE	unknown	unknown	gnl\|CDD\|275126
CP029115.1\|AWF22298.1\|3752359_3753658_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
CP029115.1\|AWF19660.1\|3740696_3741557_-\|electron-transfer-flavodomain-protein	unknown	unknown	gnl\|CDD\|224936
CP029115.1\|AWF19700.1\|3756807_3757056_-\|antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082

Protein	Function_ID	Function_description	E-value
CP029115.1\|AWF23190.1\|3751427_3752300_+\|repair-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	3.25867e-100
CP029115.1\|AWF23182.1\|3738434_3739706_+\|HI0933-like-family-protein	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	5.03655e-125
CP029115.1\|AWF20360.1\|3759415_3760717_-\|23S-rRNA-(uracil-5-)-methyltransferase-RumA	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
CP029115.1\|AWF21640.1\|3739696_3739957_+\|putative-4Fe-4S-binding-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	7.43419e-42
CP029115.1\|AWF21985.1\|3755610_3756402_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
CP029115.1\|AWF20528.1\|3753745_3755383_-\|CTP-synthase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP029115.1\|AWF19814.1\|3757133_3759368_-\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
CP029115.1\|AWF19727.1\|3746369_3747647_+\|inner-membrane-protein-YqcE	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.60446e-29
CP029115.1\|AWF19642.1\|3756472_3756808_-\|mRNA-interferase-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
CP029115.1\|AWF19592.1\|3747673_3749152_+\|FGGY-family-of-carbohydrate-kinase,-N-terminal-domain-protein	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	4.82999e-110
CP029115.1\|AWF21281.1\|3743741_3745196_-\|FAD-binding-domain-protein	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	2.41244e-83
CP029115.1\|AWF21299.1\|3741553_3742333_-\|electron-transfer-flavodomain-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
CP029115.1\|AWF21818.1\|3745265_3746051_-\|KR-domain-protein	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	7.96451e-139
CP029115.1\|AWF23084.1\|3739973_3740549_+\|hypothetical-protein	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
CP029115.1\|AWF21492.1\|3742310_3743648_-\|inner-membrane-metabolite-transport-protein-YgcS	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.74708e-50
CP029115.1\|AWF21245.1\|3750463_3751135_-\|putative-7-cyano-7-deazaguanosine-(preQ0)-biosynthesis-protein-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
CP029115.1\|AWF22298.1\|3752359_3753658_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP029115.1\|AWF19660.1\|3740696_3741557_-\|electron-transfer-flavodomain-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	7.42017e-90
CP029115.1\|AWF19700.1\|3756807_3757056_-\|antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48

>CP029115.1|AWF19592.1|3747673_3749152_+|FGGY-family-of-carbohydrate-kinase,-N-terminal-domain-protein
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEVLGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>CP029115.1|AWF19727.1|3746369_3747647_+|inner-membrane-protein-YqcE
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK
>CP029115.1|AWF21818.1|3745265_3746051_-|KR-domain-protein
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>CP029115.1|AWF21281.1|3743741_3745196_-|FAD-binding-domain-protein
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVTGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNIVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>CP029115.1|AWF21492.1|3742310_3743648_-|inner-membrane-metabolite-transport-protein-YgcS
MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>CP029115.1|AWF21299.1|3741553_3742333_-|electron-transfer-flavodomain-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>CP029115.1|AWF19660.1|3740696_3741557_-|electron-transfer-flavodomain-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>CP029115.1|AWF23084.1|3739973_3740549_+|hypothetical-protein
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>CP029115.1|AWF21640.1|3739696_3739957_+|putative-4Fe-4S-binding-protein
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>CP029115.1|AWF23182.1|3738434_3739706_+|HI0933-like-family-protein
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGVTTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGRICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL
>CP029115.1|AWF21245.1|3750463_3751135_-|putative-7-cyano-7-deazaguanosine-(preQ0)-biosynthesis-protein-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>CP029115.1|AWF21639.1|3751273_3751414_+|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFIQI
>CP029115.1|AWF23190.1|3751427_3752300_+|repair-family-protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIVVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAKGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW
>CP029115.1|AWF22298.1|3752359_3753658_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP029115.1|AWF20528.1|3753745_3755383_-|CTP-synthase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>CP029115.1|AWF21985.1|3755610_3756402_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>CP029115.1|AWF19642.1|3756472_3756808_-|mRNA-interferase-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>CP029115.1|AWF19700.1|3756807_3757056_-|antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>CP029115.1|AWF19814.1|3757133_3759368_-|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>CP029115.1|AWF20360.1|3759415_3760717_-|23S-rRNA-(uracil-5-)-methyltransferase-RumA
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP029115_5	5.7\|3723935\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723935-3723966	32	NC_021229	Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919	65474-65505	5	0.844
CP029115_5	5.7\|3723935\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723935-3723966	32	NZ_CP017422	Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence	208287-208318	6	0.812
CP029115_6	6.4\|3750003\|31\|CP029115\|CRISPRCasFinder	3750003-3750033	31	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755174-755204	6	0.806
CP029115_6	6.4\|3750003\|31\|CP029115\|CRISPRCasFinder	3750003-3750033	31	MH067970	Arthrobacter sp. strain ANT_H40 plasmid pA40H1, complete sequence	47826-47856	6	0.806
CP029115_5	5.5\|3723813\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723813-3723844	32	MF351863	Synechococcus phage Bellamy, complete genome	123998-124029	7	0.781
CP029115_5	5.6\|3723874\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723874-3723905	32	MK416018	Klebsiella phage ST147-VIM1phi7.1, complete genome	24790-24821	7	0.781
CP029115_6	6.1\|3749820\|31\|CP029115\|CRISPRCasFinder	3749820-3749850	31	MG945629	UNVERIFIED: Microviridae sp. isolate 6200-1602, complete genome	4209-4239	7	0.774
CP029115_6	6.1\|3749820\|31\|CP029115\|CRISPRCasFinder	3749820-3749850	31	MK814759	Gordonia phage Reyja, complete genome	4468-4498	7	0.774
CP029115_5	5.1\|3723569\|32\|CP029115\|CRISPRCasFinder,CRT	3723569-3723600	32	NZ_AP018516	Acetobacter orientalis strain FAN1 plasmid pAOF1, complete sequence	48296-48327	8	0.75
CP029115_5	5.7\|3723935\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723935-3723966	32	MK113951	Phage 5P_3, complete genome	11967-11998	8	0.75
CP029115_5	5.7\|3723935\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723935-3723966	32	AP017924	Ralstonia phage RP12 DNA, complete genome	11643-11674	8	0.75
CP029115_5	5.10\|3724118\|33\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3724118-3724150	33	NC_013856	Azospirillum sp. B510 plasmid pAB510b, complete sequence	375744-375776	8	0.758
CP029115_6	6.2\|3749881\|31\|CP029115\|CRISPRCasFinder	3749881-3749911	31	NZ_CP033579	Vibrio mediterranei strain 117-T6 plasmid unnamed, complete sequence	47369-47399	8	0.742
CP029115_6	6.4\|3750003\|31\|CP029115\|CRISPRCasFinder	3750003-3750033	31	NZ_CP007070	Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence	191920-191950	8	0.742
CP029115_6	6.9\|3750003\|33\|CP029115\|CRT,PILER-CR	3750003-3750035	33	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755172-755204	8	0.758
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229083-229131	9	0.816
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229184-229232	9	0.816
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229285-229333	9	0.816
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239577-239625	9	0.816
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239678-239726	9	0.816
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239779-239827	9	0.816
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230489-230537	9	0.816
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230590-230638	9	0.816
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230691-230739	9	0.816
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211459-211507	9	0.816
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211560-211608	9	0.816
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211661-211709	9	0.816
CP029115_5	5.6\|3723874\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723874-3723905	32	NZ_CP050104	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence	1143591-1143622	9	0.719
CP029115_5	5.6\|3723874\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723874-3723905	32	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	891493-891524	9	0.719
CP029115_5	5.6\|3723874\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723874-3723905	32	NZ_CP050109	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence	1143594-1143625	9	0.719
CP029115_5	5.6\|3723874\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723874-3723905	32	NZ_CP022666	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence	315030-315061	9	0.719
CP029115_5	5.6\|3723874\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723874-3723905	32	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	1123532-1123563	9	0.719
CP029115_5	5.10\|3724118\|33\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3724118-3724150	33	NZ_CP010957	Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence	26182-26214	9	0.727
CP029115_6	6.5\|3750064\|31\|CP029115\|CRISPRCasFinder	3750064-3750094	31	MF158039	Shigella phage Sf12, complete genome	4976-5006	9	0.71
CP029115_6	6.5\|3750064\|31\|CP029115\|CRISPRCasFinder	3750064-3750094	31	MF158042	Shigella phage Sd1, complete genome	939-969	9	0.71
CP029115_2	2.1\|1299491\|59\|CP029115\|CRISPRCasFinder	1299491-1299549	59	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	97-155	10	0.831
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229386-229434	10	0.796
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239880-239928	10	0.796
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230792-230840	10	0.796
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211762-211810	10	0.796
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7442-7490	10	0.796
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84266-84314	10	0.796
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386508-386556	10	0.796
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14196-14244	10	0.796
CP029115_5	5.7\|3723935\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723935-3723966	32	NC_002580	Propionibacterium freudenreichii plasmid p545, complete sequence	2898-2929	10	0.688
CP029115_5	5.8\|3723996\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723996-3724027	32	NZ_CP028970	Aminobacter sp. MSH1 plasmid pUSP2, complete sequence	156123-156154	10	0.688
CP029115_5	5.8\|3723996\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723996-3724027	32	NZ_CP053984	Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence	21888-21919	10	0.688
CP029115_5	5.8\|3723996\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723996-3724027	32	NC_010935	Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence	28766-28797	10	0.688
CP029115_5	5.8\|3723996\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723996-3724027	32	JX469826	Uncultured bacterium plasmid pB12, complete sequence	11283-11314	10	0.688
CP029115_5	5.8\|3723996\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723996-3724027	32	JN106171	Uncultured bacterium plasmid pAKD26, complete sequence	11289-11320	10	0.688
CP029115_5	5.8\|3723996\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723996-3724027	32	NC_016968	Comamonas testosteroni plasmid pTB30, complete sequence	11287-11318	10	0.688
CP029115_5	5.8\|3723996\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723996-3724027	32	NC_016978	Comamonas testosteroni plasmid pI2, complete sequence	11272-11303	10	0.688
CP029115_5	5.8\|3723996\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723996-3724027	32	NZ_CP017760	Cupriavidus necator strain NH9 plasmid pENH91, complete sequence	67078-67109	10	0.688
CP029115_5	5.8\|3723996\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723996-3724027	32	NZ_CP053554	Diaphorobacter sp. JS3050 plasmid pDCNB, complete sequence	4235-4266	10	0.688
CP029115_5	5.8\|3723996\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723996-3724027	32	NC_019263	Delftia acidovorans plasmid pLME1, complete sequence	11288-11319	10	0.688
CP029115_5	5.8\|3723996\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723996-3724027	32	NC_019264	Delftia acidovorans plasmid pNB8c, complete sequence	11288-11319	10	0.688
CP029115_5	5.8\|3723996\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723996-3724027	32	NC_019283	Delftia acidovorans plasmid pC1-1, complete sequence	11288-11319	10	0.688
CP029115_5	5.8\|3723996\|32\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3723996-3724027	32	NC_006830	Achromobacter xylosoxidans A8 plasmid pA81, complete sequence	11350-11381	10	0.688
CP029115_5	5.10\|3724118\|33\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3724118-3724150	33	CP046443	Pseudomonas coronafaciens pv. coronafaciens strain B19001 plasmid unnamed2, complete sequence	31933-31965	10	0.697
CP029115_5	5.10\|3724118\|33\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3724118-3724150	33	NZ_LT963392	Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP1, complete sequence	103013-103045	10	0.697
CP029115_5	5.10\|3724118\|33\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3724118-3724150	33	NZ_LT963392	Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP1, complete sequence	110510-110542	10	0.697
CP029115_5	5.10\|3724118\|33\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3724118-3724150	33	NZ_CP034079	Pseudomonas syringae pv. pisi str. PP1 plasmid pPP1-1, complete sequence	48454-48486	10	0.697
CP029115_5	5.10\|3724118\|33\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3724118-3724150	33	NZ_CP034080	Pseudomonas syringae pv. pisi str. PP1 plasmid pPP1-2, complete sequence	39480-39512	10	0.697
CP029115_5	5.10\|3724118\|33\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3724118-3724150	33	NC_005918	Pseudomonas syringae pv. maculicola strain ES4326 plasmid pPMA4326A, complete sequence	31117-31149	10	0.697
CP029115_5	5.10\|3724118\|33\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3724118-3724150	33	NZ_CP047262	Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326A, complete sequence	30966-30998	10	0.697
CP029115_5	5.10\|3724118\|33\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3724118-3724150	33	NZ_CP026560	Pseudomonas amygdali pv. morsprunorum strain R15244 plasmid p3_tig5, complete sequence	19118-19150	10	0.697
CP029115_5	5.10\|3724118\|33\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3724118-3724150	33	NZ_LT963406	Pseudomonas syringae pv. avii isolate CFBP3846 plasmid PP4, complete sequence	54820-54852	10	0.697
CP029115_5	5.10\|3724118\|33\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3724118-3724150	33	LT985193	Pseudomonas syringae strain CFBP 2116 genome assembly, plasmid: PP2	32077-32109	10	0.697
CP029115_5	5.10\|3724118\|33\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3724118-3724150	33	NZ_LT963393	Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP2, complete sequence	50597-50629	10	0.697
CP029115_5	5.10\|3724118\|33\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3724118-3724150	33	NZ_LT985210	Pseudomonas syringae pv. cerasicola strain CFBP 6110 plasmid PP1, complete sequence	105842-105874	10	0.697
CP029115_5	5.10\|3724118\|33\|CP029115\|CRISPRCasFinder,CRT,PILER-CR	3724118-3724150	33	NZ_LT985211	Pseudomonas syringae pv. cerasicola strain CFBP 6110 plasmid PP2, complete sequence	84272-84304	10	0.697
CP029115_6	6.5\|3750064\|31\|CP029115\|CRISPRCasFinder	3750064-3750094	31	MT840185	Bacteriophage sp. Joined_contig_19 genomic sequence	64310-64340	10	0.677
CP029115_6	6.5\|3750064\|31\|CP029115\|CRISPRCasFinder	3750064-3750094	31	KF356199	Microcystis phage MaMV-DC, complete genome	50157-50187	10	0.677
CP029115_6	6.5\|3750064\|31\|CP029115\|CRISPRCasFinder	3750064-3750094	31	NC_008562	Microcystis phage Ma-LMM01 DNA, complete genome	44744-44774	10	0.677
CP029115_2	2.1\|1299491\|59\|CP029115\|CRISPRCasFinder	1299491-1299549	59	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40375-40433	11	0.814
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194003-194051	11	0.776
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194096-194144	11	0.776
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194282-194330	11	0.776
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204497-204545	11	0.776
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204590-204638	11	0.776
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204776-204824	11	0.776
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195331-195379	11	0.776
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195424-195472	11	0.776
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195610-195658	11	0.776
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176286-176334	11	0.776
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176379-176427	11	0.776
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176565-176613	11	0.776
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27282-27330	11	0.776
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27381-27429	11	0.776
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51834-51882	11	0.776
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	19389-19437	11	0.776
CP029115_6	6.10\|3750064\|33\|CP029115\|CRT,PILER-CR	3750064-3750096	33	MF158039	Shigella phage Sf12, complete genome	4974-5006	11	0.667
CP029115_6	6.10\|3750064\|33\|CP029115\|CRT,PILER-CR	3750064-3750096	33	MF158042	Shigella phage Sd1, complete genome	937-969	11	0.667
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211730-211778	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211930-211978	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194189-194237	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222224-222272	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222424-222472	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204683-204731	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213058-213106	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213258-213306	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195517-195565	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194013-194061	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194213-194261	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176472-176520	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	11511-11559	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397088-397136	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404133-404181	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	27994-28042	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31299-31347	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	33059-33107	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	141016-141064	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	MF374379	Escherichia phage DN1, complete genome	31158-31206	12	0.755
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14105-14153	13	0.735
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	6859-6907	13	0.735
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NC_049343	Escherichia phage 500465-2, complete genome	31797-31845	13	0.735
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	94-142	13	0.735
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	82842-82890	14	0.714
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313592-313640	14	0.714
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	63889-63937	14	0.714
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	110186-110234	14	0.714
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	198909-198957	14	0.714
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40305-40353	14	0.714
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	91418-91466	14	0.714
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	102544-102592	15	0.694
CP029115_4	4.1\|3227711\|49\|CP029115\|CRISPRCasFinder	3227711-3227759	49	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56031-56079	15	0.694

1. spacer 5.7|3723935|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NC_021229 (Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919) position: , mismatch: 5, identity: 0.844

tgggcggcttgccttgcagccagctccagcag-	CRISPR spacer
tgggcggcttgcgttgcagcctgc-cgagcgga	Protospacer
************ ******** ** * ***.*

2. spacer 5.7|3723935|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017422 (Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence) position: , mismatch: 6, identity: 0.812

tgggcggcttgccttgcagccagctccagcag-	CRISPR spacer
ggggcggcttgcgttgcagcctgc-cgagcgga	Protospacer
 *********** ******** ** * ***.*

3. spacer 6.4|3750003|31|CP029115|CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.806

tggctctgcaacagcagcacccatgaccacg	CRISPR spacer
cgctccagcaacagcagcacccacgaccacg	Protospacer
.* ..* ****************.*******

4. spacer 6.4|3750003|31|CP029115|CRISPRCasFinder matches to MH067970 (Arthrobacter sp. strain ANT_H40 plasmid pA40H1, complete sequence) position: , mismatch: 6, identity: 0.806

tggctctgcaacagcagcacccatgaccacg	CRISPR spacer
aggcgtgggaacagcagcacccttgaccacg	Protospacer
 *** . * ************* ********

5. spacer 5.5|3723813|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to MF351863 (Synechococcus phage Bellamy, complete genome) position: , mismatch: 7, identity: 0.781

atcgtccatattaacaatcgtggtgagttcaa	CRISPR spacer
atcgcccatatcaacaatcgtggtgatacctt	Protospacer
****.******.**************  .*

6. spacer 5.6|3723874|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to MK416018 (Klebsiella phage ST147-VIM1phi7.1, complete genome) position: , mismatch: 7, identity: 0.781

actatggccccggcaaaaaacgcgctggtggg	CRISPR spacer
tccatcacaccgccaaaaaacgcgctgatggg	Protospacer
 *.** .* *** **************.****

7. spacer 6.1|3749820|31|CP029115|CRISPRCasFinder matches to MG945629 (UNVERIFIED: Microviridae sp. isolate 6200-1602, complete genome) position: , mismatch: 7, identity: 0.774

gacagaacggcctcagtagtctcgtcaggct	CRISPR spacer
gactgaacggcctcagtagtcttggcctttt	Protospacer
*** ******************.* *   .*

8. spacer 6.1|3749820|31|CP029115|CRISPRCasFinder matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 7, identity: 0.774

-gacagaacggcctcagtagtctcgtcaggct	CRISPR spacer
ccaccg-ctggccccagtagcctcgtcaggct	Protospacer
  ** *  .****.******.***********

9. spacer 5.1|3723569|32|CP029115|CRISPRCasFinder,CRT matches to NZ_AP018516 (Acetobacter orientalis strain FAN1 plasmid pAOF1, complete sequence) position: , mismatch: 8, identity: 0.75

cagcgtcaggcgtgaaatctcaccgtcgttgc	CRISPR spacer
attctttaggcgtgacatcttaccgtcgttga	Protospacer
   * *.******** ****.**********

10. spacer 5.7|3723935|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to MK113951 (Phage 5P_3, complete genome) position: , mismatch: 8, identity: 0.75

tgggcggcttgccttgcagccagctccagcag	CRISPR spacer
ggggcagcttgccttgcagccagccgatgctc	Protospacer
 ****.******************.   **

11. spacer 5.7|3723935|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to AP017924 (Ralstonia phage RP12 DNA, complete genome) position: , mismatch: 8, identity: 0.75

tgggcggcttgccttgcagccagctccagcag	CRISPR spacer
tgggccgcttgccgtgcagccagcgcttccgc	Protospacer
***** ******* ********** *.  *.

12. spacer 5.10|3724118|33|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
cgcgtcggcgacgcgcaggtaatgcgcgatcag	Protospacer
   * **************  *********. *

13. spacer 6.2|3749881|31|CP029115|CRISPRCasFinder matches to NZ_CP033579 (Vibrio mediterranei strain 117-T6 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

ctgttttcgcaaatctatggactattgctat	CRISPR spacer
cagttttcgcaaatcaatggactacaaacct	Protospacer
* ************* ********. . . *

14. spacer 6.4|3750003|31|CP029115|CRISPRCasFinder matches to NZ_CP007070 (Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

tggctctgcaacagcagcacccatgaccacg	CRISPR spacer
catcactgcaacatcagcatccatgaccgca	Protospacer
.. * ******** *****.********.*.

15. spacer 6.9|3750003|33|CP029115|CRT,PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758

tggctctgcaacagcagcacccatgaccacgtc	CRISPR spacer
cgctccagcaacagcagcacccacgaccacgga	Protospacer
.* ..* ****************.*******

16. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

17. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

18. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

19. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

20. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

21. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

22. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

23. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

24. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

25. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

26. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

27. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

28. spacer 5.6|3723874|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050104 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence) position: , mismatch: 9, identity: 0.719

actatggccccggcaaaaaacgcgctggtggg	CRISPR spacer
atatccggcccggcaaaaaaagcgcgggtggc	Protospacer
*.  . * ************ **** *****

29. spacer 5.6|3723874|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 9, identity: 0.719

actatggccccggcaaaaaacgcgctggtggg	CRISPR spacer
atatccggcccggcaaaaaaagcgcgggtggc	Protospacer
*.  . * ************ **** *****

30. spacer 5.6|3723874|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050109 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence) position: , mismatch: 9, identity: 0.719

actatggccccggcaaaaaacgcgctggtggg	CRISPR spacer
atatccggcccggcaaaaaaagcgcgggtggc	Protospacer
*.  . * ************ **** *****

31. spacer 5.6|3723874|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022666 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence) position: , mismatch: 9, identity: 0.719

actatggccccggcaaaaaacgcgctggtggg	CRISPR spacer
atatccggcccggcaaaaaaagcgcgggtggc	Protospacer
*.  . * ************ **** *****

32. spacer 5.6|3723874|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 9, identity: 0.719

actatggccccggcaaaaaacgcgctggtggg	CRISPR spacer
atatccggcccggcaaaaaaagcgcgggtggc	Protospacer
*.  . * ************ **** *****

33. spacer 5.10|3724118|33|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010957 (Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence) position: , mismatch: 9, identity: 0.727

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
cgaggcggcgacacgcaaggtatgcgggtcgag	Protospacer
  **********.****.******** * .  *

34. spacer 6.5|3750064|31|CP029115|CRISPRCasFinder matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 9, identity: 0.71

gaaatactggtgagcgttaatgccgcaaaca	CRISPR spacer
cggcacttggggagcgttaatgctgcaaaca	Protospacer
 ..   .*** ************.*******

35. spacer 6.5|3750064|31|CP029115|CRISPRCasFinder matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 9, identity: 0.71

gaaatactggtgagcgttaatgccgcaaaca	CRISPR spacer
cggcacttggagagcgttaatgctgcaaaca	Protospacer
 ..   .*** ************.*******

36. spacer 2.1|1299491|59|CP029115|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 10, identity: 0.831

ggtgccagaaccgtaggccggataaggcgttcacgccgcatccggcaataagtgctccg-	CRISPR spacer
gagcacagaaccgtaggacggataaggcgttcacgccgcatccggcgat-cgtgcactga	Protospacer
*.   ************ ****************************.**  **** *.*

37. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

38. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

39. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

40. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

41. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

42. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

43. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga--	CRISPR spacer
cacaagtgccggatgcggcgtaaacgccttatccggcctacg--ccagact	Protospacer
. *..***********.****.********************  .*.**

44. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gctggttgccggatgcggcgtgaacgccttatccggcctacattcggca	Protospacer
 *.** **********.************************. .. * *

45. spacer 5.7|3723935|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NC_002580 (Propionibacterium freudenreichii plasmid p545, complete sequence) position: , mismatch: 10, identity: 0.688

tgggcggcttgccttgcagccagctccagcag	CRISPR spacer
ccagcggcttgcgtggcagccagctctcaggg	Protospacer
. .********* * ***********. . .*

46. spacer 5.8|3723996|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028970 (Aminobacter sp. MSH1 plasmid pUSP2, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
gcgtgtgctggcaatcgcttccggggtgacgt	Protospacer
. *.  ********** ***.********  .

47. spacer 5.8|3723996|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053984 (Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

48. spacer 5.8|3723996|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NC_010935 (Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

49. spacer 5.8|3723996|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to JX469826 (Uncultured bacterium plasmid pB12, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

50. spacer 5.8|3723996|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to JN106171 (Uncultured bacterium plasmid pAKD26, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

51. spacer 5.8|3723996|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NC_016968 (Comamonas testosteroni plasmid pTB30, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

52. spacer 5.8|3723996|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NC_016978 (Comamonas testosteroni plasmid pI2, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

53. spacer 5.8|3723996|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017760 (Cupriavidus necator strain NH9 plasmid pENH91, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

54. spacer 5.8|3723996|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053554 (Diaphorobacter sp. JS3050 plasmid pDCNB, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

55. spacer 5.8|3723996|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NC_019263 (Delftia acidovorans plasmid pLME1, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

56. spacer 5.8|3723996|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NC_019264 (Delftia acidovorans plasmid pNB8c, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

57. spacer 5.8|3723996|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NC_019283 (Delftia acidovorans plasmid pC1-1, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

58. spacer 5.8|3723996|32|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NC_006830 (Achromobacter xylosoxidans A8 plasmid pA81, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

59. spacer 5.10|3724118|33|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to CP046443 (Pseudomonas coronafaciens pv. coronafaciens strain B19001 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.697

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

60. spacer 5.10|3724118|33|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT963392 (Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP1, complete sequence) position: , mismatch: 10, identity: 0.697

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

61. spacer 5.10|3724118|33|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT963392 (Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP1, complete sequence) position: , mismatch: 10, identity: 0.697

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

62. spacer 5.10|3724118|33|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034079 (Pseudomonas syringae pv. pisi str. PP1 plasmid pPP1-1, complete sequence) position: , mismatch: 10, identity: 0.697

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

63. spacer 5.10|3724118|33|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034080 (Pseudomonas syringae pv. pisi str. PP1 plasmid pPP1-2, complete sequence) position: , mismatch: 10, identity: 0.697

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

64. spacer 5.10|3724118|33|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NC_005918 (Pseudomonas syringae pv. maculicola strain ES4326 plasmid pPMA4326A, complete sequence) position: , mismatch: 10, identity: 0.697

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

65. spacer 5.10|3724118|33|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047262 (Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326A, complete sequence) position: , mismatch: 10, identity: 0.697

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

66. spacer 5.10|3724118|33|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026560 (Pseudomonas amygdali pv. morsprunorum strain R15244 plasmid p3_tig5, complete sequence) position: , mismatch: 10, identity: 0.697

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

67. spacer 5.10|3724118|33|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT963406 (Pseudomonas syringae pv. avii isolate CFBP3846 plasmid PP4, complete sequence) position: , mismatch: 10, identity: 0.697

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

68. spacer 5.10|3724118|33|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to LT985193 (Pseudomonas syringae strain CFBP 2116 genome assembly, plasmid: PP2) position: , mismatch: 10, identity: 0.697

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

69. spacer 5.10|3724118|33|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT963393 (Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP2, complete sequence) position: , mismatch: 10, identity: 0.697

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

70. spacer 5.10|3724118|33|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT985210 (Pseudomonas syringae pv. cerasicola strain CFBP 6110 plasmid PP1, complete sequence) position: , mismatch: 10, identity: 0.697

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

71. spacer 5.10|3724118|33|CP029115|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT985211 (Pseudomonas syringae pv. cerasicola strain CFBP 6110 plasmid PP2, complete sequence) position: , mismatch: 10, identity: 0.697

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

72. spacer 6.5|3750064|31|CP029115|CRISPRCasFinder matches to MT840185 (Bacteriophage sp. Joined_contig_19 genomic sequence) position: , mismatch: 10, identity: 0.677

gaaatactggtgagcgttaatgccgcaaaca	CRISPR spacer
accatacttgtgagcattaatgccgccgcac	Protospacer
.  ***** ******.********** .

73. spacer 6.5|3750064|31|CP029115|CRISPRCasFinder matches to KF356199 (Microcystis phage MaMV-DC, complete genome) position: , mismatch: 10, identity: 0.677

gaaatactggtgagcgttaatgccgcaaaca	CRISPR spacer
accatacttgtgagcattaatgccgccgcac	Protospacer
.  ***** ******.********** .

74. spacer 6.5|3750064|31|CP029115|CRISPRCasFinder matches to NC_008562 (Microcystis phage Ma-LMM01 DNA, complete genome) position: , mismatch: 10, identity: 0.677

gaaatactggtgagcgttaatgccgcaaaca	CRISPR spacer
accatacttgtgagcattaatgccgccgcac	Protospacer
.  ***** ******.********** .

75. spacer 2.1|1299491|59|CP029115|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.814

-ggtgccagaaccgtaggccggataaggcgttcacgccgcatccggcaataagtgctccg	CRISPR spacer
tcgcacca-aaccgtaggccggataaggcgtttacgccgcatccggcaaaaagccgtacc	Protospacer
  *..*** ***********************.**************** ***.  * *

76. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

77. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

78. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

79. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

80. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

81. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

82. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

83. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

84. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

85. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

86. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

87. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

88. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagc	Protospacer
. *.. .*********.************************** * .*

89. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagt	Protospacer
. *.. .*********.************************** * .*

90. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agctggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgc	Protospacer
  * ************.****.*******************.. *  *

91. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggtgtgaacgccttatccggcctacggatggcc	Protospacer
* .  .**********.*.************************ * *

92. spacer 6.10|3750064|33|CP029115|CRT,PILER-CR matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667

gaaatactggtgagcgttaatgccgcaaacaca	CRISPR spacer
cggcacttggggagcgttaatgctgcaaacaat	Protospacer
 ..   .*** ************.*******

93. spacer 6.10|3750064|33|CP029115|CRT,PILER-CR matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667

gaaatactggtgagcgttaatgccgcaaacaca	CRISPR spacer
cggcacttggagagcgttaatgctgcaaacaat	Protospacer
 ..   .*** ************.*******

94. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

95. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

96. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

97. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

98. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

99. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

100. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

101. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

102. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

103. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

104. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

105. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

106. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
aatttttgccggatgcggcgtgaacgccttatccggcctacaacgggca	Protospacer
  .   **********.************************..*  * *

107. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga---	CRISPR spacer
cacaattgccggatgcggcgtaaacgccttatccggcctaca---tggataa	Protospacer
. *.. **********.****.*******************.   .***

108. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttttcttgccggatgcggcgtaaacgccttatccggcctacaggacgtg	Protospacer
*..   **********.****.*******************.*  ** .

109. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ctcaaatgccggatgcggcgtgaacgccttatccggcctacgcacacta	Protospacer
..*...**********.*************************  .   *

110. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agcaaatgccggatgcggcgtaaacgccttatccggcctacatttggca	Protospacer
  *...**********.****.*******************. .* * *

111. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

112. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

113. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcg	Protospacer
* .  .**********.************************.. .** .

114. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gttgattgccggatgcggcgtaaacgccttatccggcctacattcggca	Protospacer
 ..*. **********.****.*******************. .. * *

115. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttgttttgccggatgcggcgtgaacgccttatccggcctacaaaaccat	Protospacer
*.    **********.************************..  * .

116. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtgtttgccggatgcggcgtgaacgccttatccgacctacgtgtgacg	Protospacer
  .*  **********.******************.******  * . .

117. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttatgttgccggatgcggcgtaaacgccttatccggcctacaaaagcaa	Protospacer
*.  * **********.****.*******************..    .*

118. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gtaaaatgccggatgcggcgtgaacgccttatccggcctacaaaccaag	Protospacer
 . ...**********.************************.. .*...

119. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acaaaatgccggatgcggcgtaaacgccttatccggcctacaaaatcgt	Protospacer
 * ...**********.****.*******************..  . *

120. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

121. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

122. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

123. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtaaacgccttatccggcctacaaaaagcg	Protospacer
* .  .**********.****.*******************..   * .

124. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

125. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtcaatgccggatgcggcgtgaacgccttatccggcctacaaaagcat	Protospacer
  . ..**********.************************..    .

126. spacer 4.1|3227711|49|CP029115|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtaaacgccttatccggcctacaaaaaacg	Protospacer
. * . **********.****.*******************..   . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

197056 : 280529

104

Escherichia_phage(50.0%)

portal,protease,plate,terminase,holin,tail,tRNA,integrase,head,lysis,transposase,capsid

attL 190264:190281|attR 282141:282158

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
190264:190281	attL	NA	NA	NA	NA
AWF21157.1\|197056_197494_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
AWF20724.1\|197538_198480_+	putative thioesterase domain protein	NA	NA	NA	NA
AWF20822.1\|198839_198998_+	hypothetical protein	NA	NA	NA	NA
AWF20722.1\|199332_199551_+	ribbon-helix-helix, copG family protein	NA	NA	NA	NA
AWF21716.1\|199792_200011_+	copG-family DNA-binding protein	NA	NA	NA	NA
AWF20251.1\|200340_201270_-	formate dehydrogenase accessory protein FdhE	NA	NA	NA	NA
AWF23417.1\|201266_201902_-	formate dehydrogenase, gamma subunit	NA	NA	NA	NA
AWF22091.1\|201898_202801_-	formate dehydrogenase, beta subunit	NA	NA	NA	NA
AWF20778.1\|202813_205228_-	formate dehydrogenase, alpha subunit	NA	NA	NA	NA
AWF19570.1\|205276_205864_-	molybdopterin oxidoreductase Fe4S4 domain protein	NA	NA	NA	NA
AWF20970.1\|205972_206122_+	hypothetical protein	NA	NA	NA	NA
AWF20779.1\|206090_206891_+	formate dehydrogenase family accessory protein FdhD	NA	NA	NA	NA
AWF20524.1\|207043_208099_+	hypothetical protein	NA	NA	NA	NA
AWF19491.1\|208148_209897_-	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein	NA	NA	NA	NA
AWF21688.1\|209896_210967_-	M42 glutamyl aminopeptidase family protein	NA	NA	NA	NA
AWF19503.1\|210956_212408_-	PTS system, Fru family, IIB component domain protein	NA	NA	NA	NA
AWF20734.1\|212418_212865_-	PTS system, fructose subfamily, IIA component domain protein	NA	NA	NA	NA
AWF20206.1\|213165_213480_-	L-rhamnose 1-epimerase	NA	NA	NA	NA
AWF20129.1\|213489_214314_-	rhamnulose-1-phosphate aldolase	NA	NA	NA	NA
AWF23102.1\|214764_216024_-	L-rhamnose isomerase	NA	NA	NA	NA
AWF20647.1\|216020_217490_-	rhamnulokinase	NA	NA	NA	NA
AWF22950.1\|217568_217718_+	hypothetical protein	NA	NA	NA	NA
AWF20857.1\|217825_218614_+	HTH-type transcriptional activator RhaS	NA	NA	NA	NA
AWF23578.1\|218687_219536_+	HTH-type transcriptional activator RhaR	NA	NA	NA	NA
AWF21036.1\|219532_220567_-	L-rhamnose-proton symporter	NA	NA	NA	NA
AWF19615.1\|220851_221472_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	8.4e-64	59.3
AWF19572.1\|221512_221629_-	hypothetical protein	NA	NA	NA	NA
AWF22761.1\|221731_222715_+	2-keto-3-deoxygluconate transporter	NA	NA	NA	NA
AWF22720.1\|222863_223538_+	protein YiiM	NA	NA	NA	NA
AWF19280.1\|223643_225017_-	sensor protein CpxA	W8CYF6	Bacillus_phage	3.8e-16	25.9
AWF19815.1\|225013_225646_-	response regulator	NA	NA	NA	NA
AWF19333.1\|225861_226362_+	periplasmic protein CpxP	NA	NA	NA	NA
AWF19957.1\|226548_227529_-\|integrase	phage integrase family protein	S4TP66	Salmonella_phage	4.7e-186	100.0
AWF23464.1\|228028_228301_+	regulatory phage cox family protein	Q1JS36	Enterobacteria_phage	1.4e-47	100.0
AWF22287.1\|228276_228474_+	putative orf78	S4TNZ7	Salmonella_phage	7.3e-30	100.0
AWF21815.1\|228470_228971_+	putative replication gene B protein	M1SV55	Escherichia_phage	2.6e-92	100.0
AWF22139.1\|229034_229259_+	hypothetical protein	S4TP68	Salmonella_phage	4.7e-33	100.0
AWF19597.1\|229258_229561_+	hypothetical protein	A0A0F7LDT6	Escherichia_phage	2.5e-45	96.0
AWF20304.1\|229560_229785_+	phage/conjugal plasmid C-4 type zinc finger, TraR family protein	A0A0F7LDI3	Escherichia_phage	3.8e-35	98.6
AWF22569.1\|229781_230057_+	phage/conjugal plasmid C-4 type zinc finger protein, TraR family	A0A0F7LCM4	Escherichia_phage	2.3e-45	100.0
AWF20207.1\|230046_231417_+	bacteriophage replication protein A	A0A0F7LA09	Escherichia_phage	1.3e-255	99.5
AWF19692.1\|231531_233073_+\|integrase	integrase core domain protein	K4I413	Acidithiobacillus_phage	1.3e-129	46.4
AWF20789.1\|233084_233834_+	istB-like ATP binding family protein	U5N3V8	Enterobacteria_phage	3.5e-24	31.6
AWF23368.1\|233884_234061_+	bacteriophage replication A domain protein	NA	NA	NA	NA
AWF21912.1\|234138_234912_+	putative bacteriophage replication A protein	Q858T4	Yersinia_virus	2.1e-133	93.0
AWF23130.1\|235151_237635_-	helicase C-terminal domain protein	NA	NA	NA	NA
AWF22806.1\|237806_237968_+	hypothetical protein	M1TAP7	Escherichia_phage	4.6e-14	83.0
AWF20639.1\|238006_239041_-\|portal	phage portal protein, PBSX family	U5N087	Enterobacteria_phage	1.6e-200	99.1
AWF19231.1\|239040_240813_-\|terminase	ATPase subunit of terminase family protein	A0A0F7LCK3	Escherichia_phage	0.0e+00	100.0
AWF22325.1\|240986_241841_+\|capsid	phage capsid scaffolding (GPO) serine peptidase family protein	Q778Z1	Enterobacteria_phage	1.7e-136	99.6
AWF23269.1\|241899_242973_+\|capsid	phage major capsid protein, P2 family	Q94MI3	Enterobacteria_phage	2.2e-200	98.9
AWF21362.1\|243021_243720_+\|terminase	phage small terminase subunit	Q94MJ2	Enterobacteria_phage	1.9e-117	96.1
AWF20356.1\|243819_244329_+\|head	phage head completion family protein	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
AWF23409.1\|244328_244532_+	phage Tail Protein X family protein	A0A0F7LCN2	Escherichia_phage	2.6e-30	98.5
AWF21957.1\|244535_244817_+\|holin	phage holin 2 family protein	A0A0F7LA12	Escherichia_phage	1.3e-43	100.0
AWF20098.1\|244816_245314_+	phage lysozyme family protein	A0A0F7LBS0	Escherichia_phage	1.5e-92	99.4
AWF21318.1\|245328_245754_+	putative protein lysA	A0A0F7LBP4	Escherichia_phage	3.7e-55	92.9
AWF21621.1\|245741_246167_+\|lysis	phage lysis regulatory, LysB family protein	A0A0F7L9Y0	Escherichia_phage	1.3e-63	94.3
AWF19477.1\|246153_246312_+	putative protein lysB	M1RZ27	Escherichia_phage	2.6e-22	100.0
AWF21189.1\|246274_246742_+\|tail	P2 phage tail completion R family protein	A0A0F7LA33	Escherichia_phage	3.3e-81	98.7
AWF22998.1\|246734_247187_+	phage virion morphogenesis protein	A0A0F7LDR6	Escherichia_phage	4.5e-75	97.3
AWF21000.1\|247253_247889_+\|plate	baseplate assembly protein V	U5N3F0	Enterobacteria_phage	2.5e-111	98.1
AWF22633.1\|247906_248233_+	lysozyme family protein	A0A0F7LDQ1	Escherichia_phage	5.4e-54	99.1
AWF21206.1\|248237_249146_+\|plate	baseplate J-like family protein	U5N3T9	Enterobacteria_phage	3.7e-161	99.3
AWF23123.1\|249138_249750_+\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	1.4e-116	99.5
AWF22833.1\|249746_251042_+\|tail	phage tail-collar fiber family protein	A0A0F7LBW5	Escherichia_phage	7.9e-141	96.5
AWF21548.1\|251044_251461_+\|tail	caudovirales tail fiber assembly family protein	B6SCW7	Bacteriophage	3.4e-21	46.0
AWF22402.1\|251432_251816_-\|tail	caudovirales tail fiber assembly family protein	Q9MCR5	Enterobacteria_phage	2.4e-53	83.5
AWF19048.1\|251830_252016_-\|tail	putative tail fiber assembly protein	NA	NA	NA	NA
AWF23424.1\|252049_252562_-	phage Tail Collar domain protein	A0A0F7LCR3	Escherichia_phage	3.8e-46	56.8
AWF21808.1\|252555_252678_+	hypothetical protein	NA	NA	NA	NA
AWF19965.1\|252706_253111_+\|transposase	transposase family protein	A0A0P0ZCV4	Stx2-converting_phage	3.0e-70	100.0
AWF20420.1\|253107_253455_+\|transposase	putative transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
AWF20468.1\|253503_255039_+\|transposase	transposase C of IS166 homeodomain protein	A0A0P0ZEB3	Stx2-converting_phage	3.5e-289	99.4
AWF22306.1\|255103_255649_+	resolvase, N terminal domain protein	A0A0F7LA37	Escherichia_phage	4.0e-94	95.6
AWF19903.1\|255708_256899_+\|tail	major tail sheath protein	A0A0F7LBW9	Escherichia_phage	3.7e-225	99.7
AWF22207.1\|256911_257430_+\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
AWF23081.1\|257486_257762_+	mu-like prophage FluMu gp41 family protein	A0A0F7LDQ8	Escherichia_phage	2.2e-40	98.9
AWF22715.1\|257906_260354_+\|tail	phage tail tape measure protein, TP901 family, core region	M1T2S3	Escherichia_phage	0.0e+00	95.2
AWF20650.1\|260368_260848_+	phage P2 GpU family protein	A0A0F7LDE8	Escherichia_phage	1.5e-84	99.4
AWF20800.1\|260847_262011_+	phage late control D family protein	U5N3V4	Enterobacteria_phage	4.8e-206	99.5
AWF20241.1\|262092_262311_+	ogr/Delta-like zinc finger family protein	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
AWF21576.1\|262383_262905_+	hypothetical protein	A0A2I6AZV8	Macacine_betaherpesvirus	2.7e-92	100.0
AWF20328.1\|262901_263753_+	DDE domain protein	A0A2I6AZV9	Macacine_betaherpesvirus	7.8e-113	100.0
AWF22665.1\|263897_264539_+	hypothetical protein	NA	NA	NA	NA
AWF21315.1\|264609_264732_+	putative membrane protein	NA	NA	NA	NA
AWF18950.1\|264746_265649_+	cation diffusion facilitator transporter family protein	NA	NA	NA	NA
AWF20044.1\|265829_266792_+	6-phosphofructokinase	NA	NA	NA	NA
AWF22066.1\|267111_268101_+	sulfate-binding protein	NA	NA	NA	NA
AWF22037.1\|268207_268963_+	CDP-diacylglycerol pyrophosphatase	NA	NA	NA	NA
AWF22228.1\|269017_269767_-	triose-phosphate isomerase	NA	NA	NA	NA
AWF22842.1\|269892_270492_-	hypothetical protein	NA	NA	NA	NA
AWF23258.1\|270592_271033_+	hypothetical protein	NA	NA	NA	NA
AWF20522.1\|271244_271544_+	hypothetical protein	NA	NA	NA	NA
AWF19860.1\|271570_271999_+	universal stress family protein	NA	NA	NA	NA
AWF22938.1\|272003_272750_-	ferredoxin--NADP reductase	NA	NA	NA	NA
AWF18951.1\|272846_273857_-	fructose-1,6-bisphosphatase, class II	NA	NA	NA	NA
AWF23595.1\|273991_275500_-	glycerol kinase	NA	NA	NA	NA
AWF20559.1\|275522_276368_-	MIP channel family protein	M1HWZ0	Paramecium_bursaria_Chlorella_virus	4.4e-15	28.0
AWF19021.1\|276798_277038_+	cell division protein ZapB	NA	NA	NA	NA
AWF20284.1\|277122_277608_-	regulator of ribonuclease activity A	NA	NA	NA	NA
AWF19858.1\|277700_278627_-	1,4-dihydroxy-2-naphthoate octaprenyltransferase	NA	NA	NA	NA
AWF22909.1\|278693_280025_-\|protease	ATP-dependent protease HslVU, ATPase subunit	A0A191ZC11	Erwinia_phage	1.7e-45	29.9
AWF21247.1\|280034_280529_-\|protease	ATP-dependent protease HslVU, peptidase subunit	NA	NA	NA	NA
282141:282158	attR	NA	NA	NA	NA

DBSCAN-SWA_2

656701 : 739529

Enterobacteria_phage(20.0%)

holin,tRNA,integrase,transposase

attL 680543:680585|attR 709420:709462

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWF19046.1\|656701_659557_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	1.3e-140	36.7
AWF19341.1\|659556_660000_-	DNA polymerase III subunit chi	NA	NA	NA	NA
AWF21051.1\|660353_661865_-	cytosol aminopeptidase	Q6GYZ8	Mycoplasma_phage	6.0e-47	38.0
AWF20461.1\|662089_662218_-	hypothetical protein	NA	NA	NA	NA
AWF21714.1\|662224_663232_+	lipopolysaccharide export system permease protein LptF	NA	NA	NA	NA
AWF22025.1\|663231_664314_+	lipopolysaccharide export system permease protein LptG	NA	NA	NA	NA
AWF18993.1\|664474_665977_-	AAA-like domain protein	A0A248XCZ8	Klebsiella_phage	1.4e-83	44.6
AWF22677.1\|666104_667124_-	zinc-binding dehydrogenase family protein	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	8.4e-45	30.7
AWF20283.1\|667625_668831_+\|integrase	integrase	Q7M297	Enterobacteria_phage	3.4e-61	35.2
AWF20298.1\|668941_669499_+	hypothetical protein	NA	NA	NA	NA
AWF23002.1\|669876_670107_+	prophage CP4-57 regulatory family protein	NA	NA	NA	NA
AWF22187.1\|670203_670389_-	hypothetical protein	NA	NA	NA	NA
AWF19094.1\|670435_670753_+	hypothetical protein	Q7M2A7	Enterobacteria_phage	7.7e-05	55.6
AWF23501.1\|670745_671105_+	hypothetical protein	NA	NA	NA	NA
AWF19347.1\|671136_671421_+	hypothetical protein	NA	NA	NA	NA
AWF20852.1\|671417_671801_+	hypothetical protein	NA	NA	NA	NA
AWF22937.1\|671797_674470_+	hypothetical protein	A0A1B0VP75	Pseudomonas_phage	4.1e-59	34.6
AWF22347.1\|674870_675614_+	phage polarity suppression family protein	NA	NA	NA	NA
AWF20671.1\|675610_676162_+	phage polarity suppression family protein	NA	NA	NA	NA
AWF23621.1\|676317_676440_+	ogr family transcription activator	NA	NA	NA	NA
AWF23042.1\|676617_676767_+	hypothetical protein	NA	NA	NA	NA
AWF18953.1\|677085_678054_+	putative inner membrane protein	NA	NA	NA	NA
AWF23034.1\|678055_678988_+	reverse transcriptase family protein	Q7M2A9	Enterobacteria_phage	1.8e-25	29.4
AWF20151.1\|679442_679745_+	hypothetical protein	Q7M297	Enterobacteria_phage	1.9e-21	50.5
AWF19150.1\|679804_680356_+\|integrase	phage integrase family protein	B7SYF8	Stenotrophomonas_phage	2.3e-28	40.6
680543:680585	attL	NA	NA	NA	NA
AWF22567.1\|680586_680958_-\|integrase	integrase core domain protein	Q6H9S3	Enterobacteria_phage	1.6e-65	99.2
AWF21256.1\|681149_682496_-	group II intron, maturase-specific domain protein	A0A0U4J920	Pseudomonas_phage	6.1e-43	32.9
AWF21160.1\|682504_682672_-	putative reverse transcriptase-like from prophage/plasmid domain protein	NA	NA	NA	NA
AWF21355.1\|682853_682967_-	hypothetical protein	NA	NA	NA	NA
AWF22417.1\|683263_683689_-	HTH-like domain protein	S5FNT8	Shigella_phage	1.0e-65	96.7
AWF21163.1\|683744_684047_-\|transposase	transposase family protein	Q716C1	Shigella_phage	1.2e-36	96.5
AWF18902.1\|684283_685075_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
AWF19018.1\|685653_686166_+	glycosyl transferases group 1 family protein	NA	NA	NA	NA
AWF19207.1\|686170_687121_+	hypothetical protein	NA	NA	NA	NA
AWF18916.1\|687185_688130_+	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	NA	NA	NA	NA
AWF19977.1\|688631_689450_+	HTH-like domain protein	A0A0P0I4A4	Acinetobacter_phage	1.2e-65	45.2
AWF19758.1\|689597_691601_+\|holin	transporter, betaine/carnitine/choline transporter family protein	A0A2I7QNT1	Vibrio_phage	7.5e-21	25.9
AWF21658.1\|691684_692941_+	hypothetical protein	NA	NA	NA	NA
AWF21361.1\|692997_693123_+	hypothetical protein	NA	NA	NA	NA
AWF19140.1\|693220_694087_-	DDE domain protein	A0A0P0I4A4	Acinetobacter_phage	1.1e-50	40.2
AWF23604.1\|694083_694383_-\|transposase	transposase family protein	NA	NA	NA	NA
AWF20874.1\|694449_694668_+	bacterial regulatory, tetR family protein	NA	NA	NA	NA
AWF19222.1\|694718_695012_-	istB-like ATP binding family protein	A0A2L1IVB6	Escherichia_phage	5.2e-48	99.0
AWF20663.1\|695186_695513_+\|transposase	putative transposase	Q6H9S4	Enterobacteria_phage	2.4e-54	97.2
AWF22803.1\|695512_695992_+	HTH-like domain protein	Q6H9S3	Enterobacteria_phage	1.4e-74	100.0
AWF21604.1\|696288_696402_+	hypothetical protein	NA	NA	NA	NA
AWF23253.1\|696598_698107_+	group II intron, maturase-specific domain protein	A0A0U4J920	Pseudomonas_phage	3.6e-44	31.8
AWF21613.1\|698301_698436_+\|transposase	putative transposase	NA	NA	NA	NA
AWF19385.1\|698757_699015_+	hypothetical protein	NA	NA	NA	NA
AWF20550.1\|699458_699584_+	hypothetical protein	NA	NA	NA	NA
AWF21415.1\|699572_700184_-	ABC transporter family protein	W6JKT0	Anomala_cuprea_entomopoxvirus	6.6e-05	26.5
AWF21840.1\|700143_700308_+	hypothetical protein	NA	NA	NA	NA
AWF21156.1\|700340_701297_-	fe(3+) dicitrate transport system permease protein FecD	A0A2H4IY97	uncultured_Caudovirales_phage	1.1e-17	26.1
AWF23392.1\|701293_702292_-	ABC 3 transport family protein	NA	NA	NA	NA
AWF19790.1\|702288_703191_-	periplasmic binding family protein	NA	NA	NA	NA
AWF20640.1\|703235_705560_-	fe(3+) dicitrate transport protein FecA	NA	NA	NA	NA
AWF19000.1\|705646_706600_-	fecR family protein	NA	NA	NA	NA
AWF19285.1\|706596_707118_-	putative RNA polymerase sigma factor FecI	NA	NA	NA	NA
AWF21269.1\|707603_707897_+\|transposase	putative transposase	U5P0U6	Shigella_phage	4.7e-41	87.9
AWF22086.1\|707897_708107_+\|transposase	putative transposase	U5P0U6	Shigella_phage	4.4e-33	100.0
AWF20750.1\|708868_709126_+	biofilm development YmgB/AriR family protein	NA	NA	NA	NA
AWF22868.1\|709288_709498_-	hypothetical protein	A0A0N7BTS3	Escherichia_phage	5.9e-06	96.0
709420:709462	attR	NA	NA	NA	NA
AWF21290.1\|709876_711235_+	esterase-like activity of phytase family protein	NA	NA	NA	NA
AWF20203.1\|711473_712859_-\|transposase	transposase IS66 family protein	A0A0P0ZBS5	Stx2-converting_phage	1.9e-257	89.1
AWF19470.1\|712908_713256_-\|transposase	putative transposase	A0A0P0ZBY2	Stx2-converting_phage	6.3e-61	99.1
AWF21900.1\|713252_713414_-	hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	3.8e-21	98.1
AWF19992.1\|713680_713848_-	hypothetical protein	NA	NA	NA	NA
AWF22692.1\|714160_714319_-	putative restriction endonuclease	NA	NA	NA	NA
AWF21870.1\|714550_714682_+	hypothetical protein	NA	NA	NA	NA
AWF23221.1\|714678_714801_+	putative hNH endonuclease domain protein	NA	NA	NA	NA
AWF23058.1\|714808_715789_-	hypothetical protein	H6WZJ9	Escherichia_phage	1.6e-101	56.3
AWF20739.1\|715853_716960_-	mutarotase, YjhT family protein	NA	NA	NA	NA
AWF20196.1\|716979_717528_-	putative N-acetylneuraminic acid outer membrane channel protein NanC	NA	NA	NA	NA
AWF20348.1\|718901_719405_-\|transposase	putative transposase	U5P0U6	Shigella_phage	8.2e-94	98.8
AWF19970.1\|719659_719824_+	FimH domain protein	NA	NA	NA	NA
AWF23605.1\|719997_721341_-	H+ symporter family protein	NA	NA	NA	NA
AWF21381.1\|721680_722865_+	mannonate dehydratase	NA	NA	NA	NA
AWF20323.1\|722945_724406_+	mannitol dehydrogenase Rossmann domain protein	H8ZJP8	Ostreococcus_tauri_virus	1.4e-48	32.4
AWF19710.1\|724427_724622_-	hypothetical protein	NA	NA	NA	NA
AWF22953.1\|724620_725394_+	FCD domain protein	NA	NA	NA	NA
AWF22671.1\|725631_726210_-	hypothetical protein	NA	NA	NA	NA
AWF23187.1\|726534_726657_+	putative membrane protein	NA	NA	NA	NA
AWF20512.1\|726892_727027_+	hypothetical protein	NA	NA	NA	NA
AWF21622.1\|726992_727385_+	anti-adapter protein IraD	NA	NA	NA	NA
AWF19562.1\|727377_728289_-	HTH-type transcriptional regulator YjiE	NA	NA	NA	NA
AWF21941.1\|728353_729526_-	beta-aspartyl peptidase	NA	NA	NA	NA
AWF21887.1\|729538_730000_-	inner membrane protein YjiG	NA	NA	NA	NA
AWF20116.1\|729996_730680_-	nucleoside recognition family protein	NA	NA	NA	NA
AWF23097.1\|730928_731483_+	RNA 2'-phosphotransferase, Tpt1 / KptA family protein	A0A2R2ZGT8	Clostridioides_phage	2.7e-37	45.6
AWF21539.1\|731495_732674_-	hypothetical protein	NA	NA	NA	NA
AWF21052.1\|732741_733602_-	hypothetical protein	NA	NA	NA	NA
AWF21582.1\|733666_733924_-	hypothetical protein	NA	NA	NA	NA
AWF21725.1\|733920_734688_-	putative CoA-substrate-specific enzyme activase domain protein	NA	NA	NA	NA
AWF22836.1\|734697_735849_-	2-hydroxyglutaryl-CoA dehydratase, D-component family protein	NA	NA	NA	NA
AWF19747.1\|735964_737245_-	hypothetical protein	NA	NA	NA	NA
AWF22799.1\|737285_738518_-	multidrug resistance protein MdtM	NA	NA	NA	NA
AWF22239.1\|739026_739287_+\|transposase	putative transposase	U5P0U6	Shigella_phage	6.6e-31	92.4
AWF22056.1\|739319_739529_+\|transposase	putative transposase	U5P0U6	Shigella_phage	4.4e-33	100.0

DBSCAN-SWA_3

805362 : 813301

Macacine_betaherpesvirus(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWF19376.1\|805362_807279_+	chaperone protein DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	6.9e-149	51.1
AWF19839.1\|807367_808498_+	chaperone protein DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	3.6e-28	34.6
AWF20845.1\|808760_809873_-\|transposase	transposase DDE domain protein	NA	NA	NA	NA
AWF20765.1\|809950_810103_-	protein HokC	A0A0U2QV81	Escherichia_phage	1.6e-13	78.0
AWF22980.1\|810202_811054_-	DDE domain protein	A0A2I6AZV9	Macacine_betaherpesvirus	7.8e-113	100.0
AWF22017.1\|811050_811572_-	hypothetical protein	A0A2I6AZV8	Macacine_betaherpesvirus	2.7e-92	100.0
AWF18922.1\|812134_813301_+	na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	7.5e-90	50.3

DBSCAN-SWA_4

1086257 : 1157738

Enterobacteria_phage(41.07%)

portal,terminase,tail,head,integrase,lysis,transposase

attL 1100495:1100511|attR 1156006:1156022

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWF23388.1\|1086257_1087313_-	outer membrane pore protein E	Q1MVN1	Enterobacteria_phage	2.0e-118	60.9
AWF19913.1\|1087600_1088704_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
AWF20858.1\|1088715_1089969_+	gamma-glutamyl phosphate reductase	A0A1X9I5D4	Streptococcus_phage	9.8e-96	47.2
AWF23558.1\|1090173_1091337_-\|integrase	phage integrase family protein	U5P434	Shigella_phage	1.7e-227	99.2
AWF19628.1\|1091563_1091869_-	hypothetical protein	U5P0J0	Shigella_phage	5.8e-50	98.0
AWF23430.1\|1091868_1092210_-	putative phage protein	U5P092	Shigella_phage	1.7e-63	100.0
AWF19091.1\|1092221_1092758_-	hypothetical protein	U5P0T3	Shigella_phage	4.3e-101	100.0
AWF20103.1\|1092885_1093710_-	hypothetical protein	U5P439	Shigella_phage	6.0e-150	100.0
AWF19567.1\|1093775_1094138_-	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
AWF21241.1\|1094840_1095488_-	helix-turn-helix domain protein	K7PKK1	Enterobacteria_phage	2.3e-117	99.5
AWF22051.1\|1095630_1095891_+	helix-turn-helix domain protein	K7PJQ8	Enterobacteria_phage	7.1e-41	98.8
AWF19105.1\|1095883_1096435_+	putative dNA-binding transcriptional regulator	U5P4K1	Shigella_phage	3.8e-100	98.9
AWF22830.1\|1096779_1097766_+	helix-turn-helix domain protein	U5P0A0	Shigella_phage	1.4e-134	87.8
AWF22414.1\|1098129_1098264_+	hypothetical protein	NA	NA	NA	NA
AWF22523.1\|1098256_1098910_+	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	8.1e-126	98.6
AWF19416.1\|1098906_1099233_+	lexA DNA binding domain protein	A0A291AWY9	Escherichia_phage	5.4e-54	100.0
AWF22638.1\|1099229_1099619_+	endodeoxyribonuclease RusA family protein	A0A0P0ZD39	Stx2-converting_phage	7.1e-69	100.0
AWF19873.1\|1099638_1100448_+	kilA-N domain protein	A0A291AWU7	Escherichia_phage	1.4e-148	98.1
AWF22987.1\|1100455_1101445_+	hypothetical protein	A0A291AWV9	Escherichia_phage	7.5e-192	98.5
1100495:1100511	attL	NA	NA	NA	NA
AWF19296.1\|1102334_1103276_-	hypothetical protein	A5LH79	Enterobacteria_phage	5.0e-68	44.2
AWF22005.1\|1103375_1103501_+	hypothetical protein	NA	NA	NA	NA
AWF23285.1\|1103544_1103748_+	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
AWF19953.1\|1103898_1104951_+	DNA methylase family protein	A5LH81	Enterobacteria_phage	2.7e-208	100.0
AWF20290.1\|1105018_1105234_+\|lysis	lysis S family protein	A5LH82	Enterobacteria_phage	9.0e-34	100.0
AWF20301.1\|1105233_1105731_+	lysozyme RrrD	A0A291AWW2	Escherichia_phage	4.5e-92	100.0
AWF22733.1\|1105727_1106195_+\|lysis	bacteriophage lysis family protein	A0A291AWW3	Escherichia_phage	7.7e-78	100.0
AWF23057.1\|1106182_1106335_+	hypothetical protein	A0A291AWZ2	Escherichia_phage	4.7e-21	98.0
AWF19027.1\|1107010_1107502_+	hypothetical protein	A0A291AWV8	Escherichia_phage	1.3e-72	87.2
AWF22663.1\|1107501_1109604_+\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	0.0e+00	97.1
AWF22662.1\|1109600_1109813_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
AWF20753.1\|1109812_1111282_+\|portal	phage portal protein, lambda family	K7PJP3	Enterobacteria_phage	3.1e-282	99.8
AWF22661.1\|1111334_1113293_+\|head	mu-like prophage major head subunit gpT family protein	A0A291AWT6	Escherichia_phage	0.0e+00	99.4
AWF21224.1\|1113379_1113703_+	hypothetical protein	A0A291AWX2	Escherichia_phage	8.5e-52	99.1
AWF19686.1\|1113695_1113971_+	ATP-binding sugar transporter from pro-phage family protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
AWF22450.1\|1113982_1114561_+\|tail	prophage minor tail Z family protein	A5LH33	Enterobacteria_phage	1.2e-101	99.5
AWF21782.1\|1114557_1114959_+\|tail	phage minor tail U family protein	A5LH34	Enterobacteria_phage	1.9e-72	99.2
AWF20787.1\|1114969_1115713_+	bacterial Ig-like domain family protein	A5LH35	Enterobacteria_phage	2.3e-132	99.2
AWF19908.1\|1115773_1116160_+\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	1.6e-65	100.0
AWF20513.1\|1116180_1116498_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.5e-53	100.0
AWF22767.1\|1116469_1119535_+\|tail	phage tail tape measure protein, lambda family	A0A291AWX1	Escherichia_phage	0.0e+00	99.2
AWF19457.1\|1119534_1119864_+\|tail	phage minor tail family protein	A5LH39	Enterobacteria_phage	1.7e-60	99.1
AWF19557.1\|1119873_1120572_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	6.0e-135	100.0
AWF23132.1\|1120577_1121321_+	nlpC/P60 family protein	K7PLW1	Enterobacteria_phage	2.3e-148	96.0
AWF23069.1\|1121365_1121866_+\|tail	bacteriophage lambda tail assembly I family protein	K7PH50	Enterobacteria_phage	7.7e-84	97.0
AWF19677.1\|1121926_1125424_+	hypothetical protein	A5LH43	Enterobacteria_phage	0.0e+00	97.0
AWF21018.1\|1125493_1126093_+	ompA-like transmembrane domain protein	A0A291AWV3	Escherichia_phage	5.7e-110	98.5
AWF21752.1\|1126093_1126267_-	hypothetical protein	Q6H9T0	Enterobacteria_phage	5.2e-24	93.0
AWF19546.1\|1126654_1127143_-	hypothetical protein	NA	NA	NA	NA
AWF22674.1\|1129343_1129916_+	chaperone of endosialidase family protein	A0A2D1UII2	Escherichia_phage	6.9e-97	95.3
AWF20300.1\|1130071_1130221_+	hypothetical protein	NA	NA	NA	NA
AWF22912.1\|1130776_1131658_+	hypothetical protein	NA	NA	NA	NA
AWF21002.1\|1132016_1132217_+	hypothetical protein	NA	NA	NA	NA
AWF23389.1\|1132358_1132535_-\|integrase	putative integrase	A0A2D1GN00	Marinobacter_phage	1.9e-05	49.1
AWF20856.1\|1132927_1133110_+	hypothetical protein	NA	NA	NA	NA
AWF19596.1\|1133610_1134453_-	hypothetical protein	NA	NA	NA	NA
AWF19909.1\|1134664_1134817_+	hypothetical protein	NA	NA	NA	NA
AWF22984.1\|1135091_1136300_+\|integrase	phage integrase family protein	Q7M297	Enterobacteria_phage	7.7e-130	56.5
AWF21980.1\|1136556_1137750_+	eco57I restriction-modification methylase family protein	NA	NA	NA	NA
AWF22041.1\|1137742_1139449_+	archaeal ATPase family protein	NA	NA	NA	NA
AWF21800.1\|1139426_1140497_+	hypothetical protein	NA	NA	NA	NA
AWF21283.1\|1140897_1141620_-	putative membrane protein	A0A2L1IVB6	Escherichia_phage	2.8e-18	97.9
AWF20952.1\|1141591_1142050_-\|transposase	putative transposase	A0A2L1IVA1	Escherichia_phage	1.3e-42	84.0
AWF20971.1\|1142215_1142707_-\|transposase	putative transposase	A0A2L1IVA1	Escherichia_phage	2.8e-86	96.3
AWF21317.1\|1142703_1143111_-	phosphoethanolamine N-methyltransferase domain protein	NA	NA	NA	NA
AWF18995.1\|1143121_1143379_-	hypothetical protein	NA	NA	NA	NA
AWF20066.1\|1143491_1143644_-	hypothetical protein	NA	NA	NA	NA
AWF23587.1\|1143753_1144497_-	ribulose-phosphate 3 epimerase family protein	NA	NA	NA	NA
AWF21773.1\|1144507_1144798_-	autoinducer 2-degrading protein LsrG	NA	NA	NA	NA
AWF21243.1\|1144846_1145722_-	hypothetical protein	NA	NA	NA	NA
AWF20088.1\|1145750_1146773_-	autoinducer 2-binding protein LsrB	NA	NA	NA	NA
AWF19712.1\|1146799_1147798_-	branched-chain amino acid transport system / permease component family protein	NA	NA	NA	NA
AWF21077.1\|1147797_1148844_-	branched-chain amino acid transport system / permease component family protein	NA	NA	NA	NA
AWF20056.1\|1148837_1150391_-	heme ABC exporter, ATP-binding protein CcmA	A0A2H4PQG7	Staphylococcus_phage	1.9e-19	29.5
AWF19481.1\|1150640_1151597_+	transcriptional regulator LsrR	NA	NA	NA	NA
AWF22647.1\|1151696_1153289_+	autoinducer 2 kinase LsrK	NA	NA	NA	NA
AWF19778.1\|1153301_1153652_+	hypothetical protein	NA	NA	NA	NA
AWF20951.1\|1154254_1154626_-\|integrase	integrase core domain protein	A0A0N7C1X7	Escherichia_phage	1.0e-64	96.7
AWF23361.1\|1154817_1156326_-	group II intron, maturase-specific domain protein	A0A0U4J920	Pseudomonas_phage	3.6e-44	31.8
1156006:1156022	attR	NA	NA	NA	NA
AWF21408.1\|1156522_1156636_-	hypothetical protein	NA	NA	NA	NA
AWF23267.1\|1156932_1157412_-	HTH-like domain protein	Q6H9S3	Enterobacteria_phage	2.2e-72	97.1
AWF19777.1\|1157411_1157738_-\|transposase	putative transposase	Q6H9S4	Enterobacteria_phage	2.4e-54	97.2

DBSCAN-SWA_5

1442878 : 1494435

Escherichia_phage(20.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWF22712.1\|1442878_1444264_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	6.7e-45	34.5
AWF20456.1\|1444299_1444821_-	inner membrane protein YbcI	NA	NA	NA	NA
AWF23139.1\|1444928_1445141_-	hypothetical protein	NA	NA	NA	NA
AWF23375.1\|1445142_1446009_-	bifunctional protein FolD	A0A249XZQ2	Enterococcus_phage	1.7e-30	37.5
AWF21272.1\|1446479_1447022_+	type-1 fimbrial protein, A chain	NA	NA	NA	NA
AWF19369.1\|1447241_1447934_+	gram-negative pili assembly chaperone, C-terminal domain protein	NA	NA	NA	NA
AWF20286.1\|1447964_1450568_+	papC C-terminal domain protein	NA	NA	NA	NA
AWF22048.1\|1450618_1451587_+	fimbrial family protein	NA	NA	NA	NA
AWF21907.1\|1451915_1452113_+	putative fimbrial protein	NA	NA	NA	NA
AWF21511.1\|1452115_1452748_-	bacterial regulatory, luxR family protein	NA	NA	NA	NA
AWF19190.1\|1452802_1452958_+	hypothetical protein	NA	NA	NA	NA
AWF23374.1\|1453112_1453874_-	HTH-type transcriptional regulator AdiY	NA	NA	NA	NA
AWF20835.1\|1454056_1454947_-	putative n5-glutamine methyltransferase	NA	NA	NA	NA
AWF21528.1\|1454947_1457920_-	bacteriophage N adsorption A C-term family protein	NA	NA	NA	NA
AWF19440.1\|1457906_1460144_-	glycosyl transferase group 2 family protein	NA	NA	NA	NA
AWF19881.1\|1460293_1461736_-	sensor kinase CusS	A0A1V0SGX0	Hokovirus	3.0e-11	26.2
AWF20008.1\|1461725_1462409_-	transcriptional regulatory protein CusR	W8CYM9	Bacillus_phage	1.0e-30	35.1
AWF20082.1\|1462455_1462611_+	putative cu(I)/Ag(I) efflux system outer membrane protein CusC	NA	NA	NA	NA
AWF21966.1\|1462565_1463939_+	cation efflux system protein CusC	NA	NA	NA	NA
AWF19193.1\|1464096_1464429_+	cation efflux system protein CusF	NA	NA	NA	NA
AWF19359.1\|1464444_1465668_+	cation efflux system protein CusB	NA	NA	NA	NA
AWF19169.1\|1465679_1468823_+	cation efflux system protein CusA	S5VTK5	Leptospira_phage	2.2e-59	22.1
AWF23588.1\|1468924_1470301_+	phenylalanine-specific permease	NA	NA	NA	NA
AWF19119.1\|1470381_1471629_-	miniconductance mechanosensitive channel	NA	NA	NA	NA
AWF19155.1\|1471736_1472390_-	oxygen-insensitive NAD(P)H nitroreductase	NA	NA	NA	NA
AWF20326.1\|1472437_1472578_-\|transposase	putative transposase domain protein	NA	NA	NA	NA
AWF22612.1\|1472568_1473273_+\|transposase	transposase IS66 family protein	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWF19367.1\|1473312_1474110_+	putative colanic acid biosynthesis protein	A0A291LBB9	Klebsiella_phage	7.8e-14	41.7
AWF21812.1\|1474274_1475168_+	regulatory protein GalF	A0A127AW70	Bacillus_phage	3.3e-45	40.3
AWF21222.1\|1475624_1476629_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	2.2e-82	47.3
AWF20632.1\|1476662_1478879_+	glycosyl transferases group 1 family protein	NA	NA	NA	NA
AWF22592.1\|1478875_1479655_+	ABC-2 type transporter family protein	NA	NA	NA	NA
AWF21529.1\|1479661_1480414_+	ABC transporter family protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.1e-12	29.4
AWF19011.1\|1480431_1481511_+	glycosyltransferase Family 4 family protein	NA	NA	NA	NA
AWF19531.1\|1481520_1482675_+	glycosyl transferases group 1 family protein	NA	NA	NA	NA
AWF21075.1\|1482722_1483913_+	methionine biosynthesis MetW family protein	NA	NA	NA	NA
AWF22709.1\|1483916_1485998_+	glycosyl transferases group 1 family protein	A0A2K9L4U1	Tupanvirus	2.5e-19	27.7
AWF23262.1\|1486215_1487139_-\|transposase	transposase DDE domain protein	Q9MCT5	Escherichia_phage	2.2e-177	100.0
AWF18967.1\|1487365_1487494_+	hypothetical protein	NA	NA	NA	NA
AWF20651.1\|1488210_1488702_+	acetyltransferase family protein	NA	NA	NA	NA
AWF21801.1\|1488787_1489150_-	hypothetical protein	NA	NA	NA	NA
AWF20812.1\|1489234_1489939_-\|transposase	transposase IS66 family protein	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWF21906.1\|1489915_1490080_+\|transposase	putative transposase	NA	NA	NA	NA
AWF22844.1\|1490076_1491195_-	carboxylate-amine ligase YbdK	NA	NA	NA	NA
AWF19795.1\|1491626_1492148_+	hypothetical protein	A0A2I6AZV8	Macacine_betaherpesvirus	2.7e-92	100.0
AWF21649.1\|1492144_1492996_+	DDE domain protein	A0A2I6AZV9	Macacine_betaherpesvirus	7.8e-113	100.0
AWF21804.1\|1493093_1493246_+	hok/gef family protein	NA	NA	NA	NA
AWF20073.1\|1493322_1494435_+\|transposase	transposase DDE domain protein	NA	NA	NA	NA

DBSCAN-SWA_6

2067509 : 2123551

Escherichia_phage(40.82%)

portal,protease,terminase,tail,head,integrase,tRNA,lysis,transposase,capsid

attL 2079795:2079810|attR 2121793:2121808

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWF20630.1\|2067509_2068628_-\|integrase	phage integrase family protein	Q77Z04	Phage_21	1.6e-84	44.4
AWF20854.1\|2068596_2068866_-	excisionase-like family protein	NA	NA	NA	NA
AWF22721.1\|2068927_2071369_-	enterobacterial exodeoxyribonuclease VIII family protein	V5UQJ3	Shigella_phage	3.1e-114	46.9
AWF19715.1\|2071462_2071654_-	hypothetical protein	NA	NA	NA	NA
AWF20893.1\|2071650_2071839_-	dicB family protein	NA	NA	NA	NA
AWF21179.1\|2071855_2071978_+	putative ybl82 protein	NA	NA	NA	NA
AWF22097.1\|2072239_2072443_+	hypothetical protein	NA	NA	NA	NA
AWF21992.1\|2072407_2072626_-	hypothetical protein	NA	NA	NA	NA
AWF23535.1\|2072697_2073054_-	hypothetical protein	NA	NA	NA	NA
AWF19811.1\|2073350_2073989_-	helix-turn-helix family protein	H9C160	Pectobacterium_phage	8.7e-16	26.7
AWF19480.1\|2074306_2074732_+	hypothetical protein	NA	NA	NA	NA
AWF19544.1\|2074803_2075874_+	hypothetical protein	A0A088CD36	Shigella_phage	2.6e-52	56.6
AWF23255.1\|2075914_2076337_+	hypothetical protein	A0A0U2QQN3	Escherichia_phage	2.6e-64	90.6
AWF21554.1\|2076394_2076751_+	putative bacteriophage protein	A0A2R2Z307	Escherichia_phage	1.8e-58	99.2
AWF19984.1\|2076844_2077027_+	putative phage protein	A0A2R2Z308	Escherichia_phage	1.4e-27	100.0
AWF22452.1\|2077019_2077196_+	putative yheA protein	A0A2R2X2A8	Escherichia_phage	6.7e-27	94.8
AWF21543.1\|2078844_2079780_+	hypothetical protein	U5P0K4	Shigella_phage	6.9e-78	48.7
AWF22440.1\|2079780_2080161_+	endodeoxyribonuclease RusA family protein	V5URS4	Shigella_phage	1.3e-35	63.6
2079795:2079810	attL	NA	NA	NA	NA
AWF21667.1\|2080157_2080979_+	antitermination family protein	K7P7B9	Enterobacteria_phage	5.1e-77	58.2
AWF19339.1\|2081343_2081460_+	hypothetical protein	H6WZJ7	Escherichia_phage	3.6e-05	93.5
AWF19460.1\|2081431_2081587_+	hypothetical protein	NA	NA	NA	NA
AWF21962.1\|2082231_2082417_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	1.7e-20	75.4
AWF19694.1\|2082812_2083016_+	hypothetical protein	H6WZJ9	Escherichia_phage	7.7e-27	95.2
AWF21221.1\|2083012_2083174_+	hypothetical protein	Q08JA2	Stx2-converting_phage	5.9e-14	87.0
AWF22949.1\|2083332_2083539_+\|lysis	lysis S family protein	A0A2R2Z340	Escherichia_phage	8.1e-32	100.0
AWF23038.1\|2083543_2083894_+	hypothetical protein	K7PGU6	Enterobacteria_phage	1.4e-36	94.0
AWF22429.1\|2083957_2084491_+	phage lysozyme family protein	Q08J98	Stx2-converting_phage	1.5e-98	93.2
AWF23114.1\|2084487_2084949_+\|lysis	bacteriophage lysis family protein	A0A0K2FJD0	Enterobacteria_phage	9.6e-65	87.6
AWF18908.1\|2084980_2085274_-	lipoprotein bor	K7PL54	Enterobacteria_phage	5.9e-44	90.7
AWF19072.1\|2085712_2086066_-	hypothetical protein	NA	NA	NA	NA
AWF22684.1\|2086459_2086780_+\|terminase	phage terminase, small subunit, P27 family	A0A1B5FPA0	Escherichia_phage	4.9e-52	98.1
AWF19983.1\|2086779_2088537_+	phage Terminase family protein	A0A1B5FP96	Escherichia_phage	0.0e+00	99.3
AWF20095.1\|2088554_2088695_+	putative membrane protein	NA	NA	NA	NA
AWF22177.1\|2088684_2089911_+\|portal	phage portal protein, HK97 family	Q8SBI0	Shigella_phage	3.7e-204	83.3
AWF21628.1\|2090142_2090502_+\|head,protease	caudovirus prohead protease family protein	Q8SBH9	Shigella_phage	5.2e-50	82.4
AWF22062.1\|2090516_2091734_+\|capsid	phage major capsid protein, HK97 family	A0A1W6JP20	Morganella_phage	5.9e-162	71.6
AWF20927.1\|2091810_2092128_+\|head,tail	phage gp6-like head-tail connector family protein	A0A1W6JNZ5	Morganella_phage	5.3e-22	49.5
AWF22225.1\|2092136_2092475_+\|head,tail	putative head-tail adaptor	A0A1B5FP90	Escherichia_phage	7.5e-51	90.2
AWF23347.1\|2092474_2092921_+	hypothetical protein	S4TR46	Salmonella_phage	2.3e-63	81.1
AWF23452.1\|2092980_2093262_+	hypothetical protein	A0A1B5FP84	Escherichia_phage	4.8e-43	95.7
AWF21684.1\|2093322_2094027_+	immunoglobulin domain protein	A0A1B5FP82	Escherichia_phage	1.4e-112	92.7
AWF19719.1\|2094041_2094413_+\|tail	phage tail assembly chaperone family protein	A0A1B5FP91	Escherichia_phage	6.5e-64	100.0
AWF20239.1\|2094424_2094715_+	hypothetical protein	A0A1B5FP87	Escherichia_phage	7.2e-42	95.7
AWF19522.1\|2094761_2097989_+\|tail	phage tail tape measure protein, lambda family	A0A1B5FPE2	Escherichia_phage	0.0e+00	95.0
AWF20347.1\|2098023_2098323_+\|tail	phage minor tail family protein	A0A0P0ZDL9	Stx2-converting_phage	5.5e-37	69.7
AWF22353.1\|2098322_2099021_+\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	3.4e-130	97.0
AWF19134.1\|2099134_2099770_+	nlpC/P60 family protein	K7PLW1	Enterobacteria_phage	5.5e-127	97.2
AWF23239.1\|2099802_2100315_+\|tail	bacteriophage lambda tail assembly I family protein	K7PH50	Enterobacteria_phage	3.9e-83	93.5
AWF20972.1\|2100375_2103855_+	fibronectin type III family protein	A0A291AWT4	Escherichia_phage	0.0e+00	89.9
AWF22314.1\|2103922_2104522_+	outer membrane beta-barrel domain protein	H6WZM8	Escherichia_phage	1.6e-107	95.0
AWF20391.1\|2104522_2104696_-	hypothetical protein	Q6H9T0	Enterobacteria_phage	1.9e-26	100.0
AWF19524.1\|2105083_2105572_-	hypothetical protein	NA	NA	NA	NA
AWF22726.1\|2105615_2107910_+	hypothetical protein	A0A2D1UII2	Escherichia_phage	0.0e+00	82.6
AWF21918.1\|2107912_2108284_-\|integrase	integrase core domain protein	Q6H9S3	Enterobacteria_phage	1.6e-65	99.2
AWF20658.1\|2108475_2109984_-	group II intron, maturase-specific domain protein	A0A0U4J920	Pseudomonas_phage	3.6e-44	31.8
AWF19286.1\|2110180_2110294_-	hypothetical protein	NA	NA	NA	NA
AWF22737.1\|2110590_2111070_-	HTH-like domain protein	Q6H9S3	Enterobacteria_phage	1.4e-74	100.0
AWF21513.1\|2111069_2111396_-\|transposase	putative transposase	Q6H9S4	Enterobacteria_phage	2.4e-54	97.2
AWF21057.1\|2111676_2111928_+	hypothetical protein	A0A2D1UII2	Escherichia_phage	2.3e-36	96.4
AWF23540.1\|2112165_2112597_-	putative 3-demethylubiquinone-9 3-methyltransferase 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase DHHB methyltransferase	NA	NA	NA	NA
AWF19179.1\|2113388_2114222_-	binding-protein-dependent transport system inner membrane component family protein	Q6GZ02	Mycoplasma_phage	6.5e-11	28.7
AWF22482.1\|2114235_2115372_-	spermidine/putrescine import ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	5.5e-29	39.8
AWF23470.1\|2115621_2116848_+	peptidase T	NA	NA	NA	NA
AWF20622.1\|2116896_2118018_-	50S ribosomal protein L16 arginine hydroxylase	NA	NA	NA	NA
AWF23462.1\|2118093_2119554_-	sensor protein PhoQ	NA	NA	NA	NA
AWF20110.1\|2119553_2120225_-	transcriptional regulatory protein PhoP	NA	NA	NA	NA
AWF21662.1\|2120393_2121764_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.2e-107	44.9
AWF19835.1\|2121767_2122409_-	high frequency lysogenization protein HflD	NA	NA	NA	NA
2121793:2121808	attR	NA	NA	NA	NA
AWF22533.1\|2122444_2123551_-\|tRNA	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_7

2929117 : 3012248

Shigella_phage(19.05%)

integrase,transposase

attL 2945138:2945153|attR 2955426:2955441

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWF20853.1\|2929117_2929621_-\|transposase	putative transposase	U5P0U6	Shigella_phage	3.7e-94	99.4
AWF20736.1\|2929965_2930103_+	hypothetical protein	NA	NA	NA	NA
AWF21262.1\|2930275_2930440_-	mATE family multidrug exporter	NA	NA	NA	NA
AWF19907.1\|2930783_2931773_-	MATE efflux family protein	NA	NA	NA	NA
AWF21641.1\|2932079_2933030_-	HTH-type transcriptional regulator cbl	NA	NA	NA	NA
AWF20638.1\|2933131_2934049_-	lysR substrate binding domain protein	NA	NA	NA	NA
AWF22127.1\|2934506_2935439_-	putative L,D-transpeptidase ErfK/SrfK	NA	NA	NA	NA
AWF19756.1\|2935503_2936583_-	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
AWF21286.1\|2936594_2937338_-	cobalamin 5'-phosphate synthase	NA	NA	NA	NA
AWF21213.1\|2937334_2937880_-	bifunctional adenosylcobalamin biosynthesis protein CobU	NA	NA	NA	NA
AWF19131.1\|2938031_2938154_-	cobalamin biosynthesis family protein	NA	NA	NA	NA
AWF22617.1\|2938344_2938509_-	hypothetical protein	NA	NA	NA	NA
AWF22475.1\|2938932_2939289_+\|transposase	transposase family protein	U5P4I9	Shigella_phage	4.4e-33	92.5
AWF23461.1\|2939245_2940397_+	bacterial regulatory, luxR family protein	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
AWF23023.1\|2941683_2942088_-	hypothetical protein	NA	NA	NA	NA
AWF21968.1\|2942272_2942752_+\|transposase	transposase family protein	NA	NA	NA	NA
AWF19936.1\|2942818_2943241_+\|transposase	transposase IS116/IS110/IS902 family protein	NA	NA	NA	NA
AWF22911.1\|2943250_2943643_-	hypothetical protein	NA	NA	NA	NA
AWF20467.1\|2943808_2944378_-	hypothetical protein	NA	NA	NA	NA
AWF19425.1\|2945122_2945263_-	hemolysin expression modulating family protein	NA	NA	NA	NA
2945138:2945153	attL	NA	NA	NA	NA
AWF20146.1\|2946006_2946213_+	helix-turn-helix domain protein	NA	NA	NA	NA
AWF20563.1\|2946307_2946910_+	hypothetical protein	NA	NA	NA	NA
AWF20315.1\|2947080_2947278_+	hypothetical protein	NA	NA	NA	NA
AWF21282.1\|2947424_2947553_-	hypothetical protein	NA	NA	NA	NA
AWF21738.1\|2947988_2948135_+	hypothetical protein	NA	NA	NA	NA
AWF21948.1\|2948313_2949027_+	hypothetical protein	NA	NA	NA	NA
AWF21296.1\|2949111_2949984_+	miro-like family protein	NA	NA	NA	NA
AWF21971.1\|2950475_2951225_-	istB-like ATP binding family protein	U5N3V8	Enterobacteria_phage	3.5e-24	31.6
AWF22813.1\|2951236_2952778_-\|integrase	integrase core domain protein	K4I413	Acidithiobacillus_phage	1.3e-129	46.4
AWF22237.1\|2953004_2955788_+	autotransporter beta-domain protein	NA	NA	NA	NA
2955426:2955441	attR	NA	NA	NA	NA
AWF20587.1\|2955822_2956017_+	hypothetical protein	NA	NA	NA	NA
AWF22336.1\|2956171_2956990_+	hypothetical protein	A0A2C9CX26	Yersinia_phage	4.2e-47	40.1
AWF20994.1\|2957331_2957805_+	intergenic-region protein	A9J566	Pseudomonas_phage	1.5e-12	30.3
AWF19352.1\|2957820_2958297_+	DNA repair RadC family protein	NA	NA	NA	NA
AWF20931.1\|2958365_2958587_+	hypothetical protein	A0A142F0X9	Klebsiella_phage	1.9e-10	45.8
AWF20902.1\|2958586_2958700_+	putative intergenic-region protein	NA	NA	NA	NA
AWF23617.1\|2958749_2959118_+	yagB/YeeU/YfjZ family protein	NA	NA	NA	NA
AWF21799.1\|2959207_2959585_+	hypothetical protein	NA	NA	NA	NA
AWF20794.1\|2960344_2961880_-\|transposase	transposase C of IS166 homeodomain protein	A0A0P0ZEB3	Stx2-converting_phage	3.5e-289	99.4
AWF19508.1\|2961928_2962276_-\|transposase	putative transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
AWF20369.1\|2962272_2962677_-\|transposase	transposase family protein	A0A0P0ZCV4	Stx2-converting_phage	3.0e-70	100.0
AWF21040.1\|2962705_2962858_-	hypothetical protein	NA	NA	NA	NA
AWF22997.1\|2963088_2963229_+	hypothetical protein	NA	NA	NA	NA
AWF21702.1\|2963377_2963560_+\|transposase	transposase IS116/IS110/IS902 family protein	NA	NA	NA	NA
AWF23266.1\|2963941_2964196_+	ethanolamine utilization - propanediol utilization family protein	NA	NA	NA	NA
AWF22331.1\|2964296_2964626_-	hypothetical protein	NA	NA	NA	NA
AWF22160.1\|2964710_2964833_+	hypothetical protein	NA	NA	NA	NA
AWF19171.1\|2964797_2965856_-	inner membrane protein YeeA	NA	NA	NA	NA
AWF23489.1\|2966053_2966527_-	DNA gyrase inhibitor	NA	NA	NA	NA
AWF23312.1\|2966622_2967135_+\|transposase	helix-turn-helix domain of transposase ISL3 family protein	NA	NA	NA	NA
AWF23301.1\|2967137_2967842_+\|transposase	transposase family protein	NA	NA	NA	NA
AWF23185.1\|2967968_2969135_-	D-alanyl-D-alanine carboxypeptidase DacD	B6DZZ7	Stx2-converting_phage	1.5e-226	99.0
AWF21951.1\|2969343_2970771_+	exodeoxyribonuclease I	NA	NA	NA	NA
AWF21523.1\|2970813_2971041_-	sirA-like family protein	NA	NA	NA	NA
AWF21593.1\|2971054_2972113_-	hypothetical protein	NA	NA	NA	NA
AWF19516.1\|2972291_2973650_-	low-affinity putrescine importer PlaP	NA	NA	NA	NA
AWF20546.1\|2973916_2974846_-	lysR substrate binding domain protein	NA	NA	NA	NA
AWF22679.1\|2974891_2975716_-	NADH(P)-binding family protein	NA	NA	NA	NA
AWF19912.1\|2975798_2976053_-	addiction module toxin, Txe/YoeB family	NA	NA	NA	NA
AWF23079.1\|2976049_2976301_-	antitoxin YefM	NA	NA	NA	NA
AWF22351.1\|2976780_2977680_+	ATP phosphoribosyltransferase	A0A0F7Q4B0	Cellulophaga_phage	1.8e-11	94.7
AWF19946.1\|2977685_2978990_+	histidinol dehydrogenase	NA	NA	NA	NA
AWF21473.1\|2978986_2980057_+	histidinol-phosphate transaminase	NA	NA	NA	NA
AWF21629.1\|2980056_2981124_+	histidine biosynthesis bifunctional protein HisB	NA	NA	NA	NA
AWF20934.1\|2981123_2981714_+	imidazole glycerol phosphate synthase, glutamine amidotransferase subunit	NA	NA	NA	NA
AWF21969.1\|2981713_2982451_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
AWF22330.1\|2982432_2983209_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
AWF20965.1\|2983202_2983811_+	phosphoribosyl-ATP diphosphatase	NA	NA	NA	NA
AWF20354.1\|2983849_2984674_-	glycosyl transferases group 1 family protein	NA	NA	NA	NA
AWF19126.1\|2984801_2985305_-\|transposase	putative transposase	U5P0U6	Shigella_phage	1.7e-94	99.4
AWF22649.1\|2985600_2986767_-	nucleotide sugar dehydrogenase family protein	A0A1J0FA55	Only_Syngen_Nebraska_virus	1.8e-112	53.7
AWF23234.1\|2986930_2988301_-	phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein	A0A127AWJ1	Bacillus_phage	9.3e-31	25.6
AWF20156.1\|2988323_2989739_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	5.8e-52	30.6
AWF22823.1\|2989966_2991373_-	6-phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	8.0e-38	28.7
AWF21019.1\|2991539_2992295_-	undecaprenyl-phosphate glucose phosphotransferase	NA	NA	NA	NA
AWF21148.1\|2992375_2992879_-\|transposase	putative transposase	Q71TF0	Escherichia_phage	1.5e-95	100.0
AWF21466.1\|2992914_2993040_+	hypothetical protein	NA	NA	NA	NA
AWF19902.1\|2993932_2994886_-	acyltransferase family protein	NA	NA	NA	NA
AWF22383.1\|2994893_2996627_-	pectate lyase superfamily protein	A0A0A8J9B0	Klebsiella_phage	7.6e-54	33.0
AWF23299.1\|2996662_2997430_-	glycosyl transferase WecB/TagA/CpsF family protein	NA	NA	NA	NA
AWF20474.1\|2997439_2998609_-	glycosyl transferases group 1 family protein	NA	NA	NA	NA
AWF21861.1\|2998620_2999709_-	glycosyl transferases group 1 family protein	NA	NA	NA	NA
AWF19857.1\|2999708_3001001_-	O-antigen ligase like membrane family protein	NA	NA	NA	NA
AWF20004.1\|3000957_3002112_-	glycosyltransferase Family 4 family protein	NA	NA	NA	NA
AWF22276.1\|3002122_3003289_-	polysaccharide biosynthesis family protein	NA	NA	NA	NA
AWF22178.1\|3003292_3004243_-	polysaccharide pyruvyl transferase family protein	NA	NA	NA	NA
AWF22479.1\|3004584_3005088_+\|transposase	putative transposase	U5P0U6	Shigella_phage	3.7e-94	99.4
AWF22006.1\|3005102_3007274_-	tyrosine-protein kinase etk	NA	NA	NA	NA
AWF20557.1\|3007292_3007481_-	putative acid phosphatase Wzb	NA	NA	NA	NA
AWF22714.1\|3007730_3008864_-	putative outer membrane lipoprotein Wza	NA	NA	NA	NA
AWF20770.1\|3009009_3010443_-	capsule assembly Wzi family protein	NA	NA	NA	NA
AWF22517.1\|3010732_3010855_+	hypothetical protein	NA	NA	NA	NA
AWF19218.1\|3011023_3011344_+\|transposase	transposase family protein	NA	NA	NA	NA
AWF20388.1\|3011517_3011652_-	hypothetical protein	NA	NA	NA	NA
AWF21389.1\|3011879_3012248_+\|transposase	transposase family protein	NA	NA	NA	NA

DBSCAN-SWA_8

3090607 : 3100050

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWF22166.1\|3090607_3091744_+	VWA domain containing CoxE-like family protein	Q9EYF7	Enterobacteria_phage	5.0e-163	97.4
AWF22555.1\|3091740_3093741_+	SWIM zinc finger family protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.7
AWF20408.1\|3093865_3094327_+	hypothetical protein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
AWF22817.1\|3094368_3094839_-	hypothetical protein	Q9EYF4	Enterobacteria_phage	5.2e-82	99.4
AWF22839.1\|3094885_3095605_-	response regulator	NA	NA	NA	NA
AWF20620.1\|3095601_3097287_-	putative sensor-like histidine kinase YehU	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
AWF21661.1\|3097508_3098240_+	merR regulatory family protein	Q9EYF2	Enterobacteria_phage	2.8e-111	99.0
AWF21270.1\|3098387_3099119_-	putative osmoprotectant uptake system permease protein YehW	NA	NA	NA	NA
AWF23342.1\|3099123_3100050_-	ABC transporter family protein	G3M9Y6	Bacillus_virus	1.3e-23	30.8

DBSCAN-SWA_9

3702930 : 3716113

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWF22453.1\|3702930_3705492_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.0e-30	20.6
AWF20728.1\|3705597_3706254_+	serine/threonine-protein phosphatase 2	A0A222YWF0	Escherichia_phage	6.2e-49	46.3
AWF19407.1\|3706304_3707072_-	HTH domain protein	A0A077SK06	Escherichia_phage	7.4e-70	56.3
AWF23151.1\|3707267_3708176_+	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein	A0A077SLF7	Escherichia_phage	5.1e-118	76.5
AWF22651.1\|3708172_3709435_+	hypothetical protein	A0A077SLJ7	Escherichia_phage	1.7e-135	61.4
AWF18992.1\|3709473_3710070_+	class II Aldolase and Adducin N-terminal domain protein	A0A077SK32	Escherichia_phage	2.3e-79	74.6
AWF23601.1\|3710074_3710851_+	putative hydroxypyruvate isomerase YgbM	NA	NA	NA	NA
AWF19111.1\|3710939_3712304_+	inner membrane permease YgbN	NA	NA	NA	NA
AWF21647.1\|3712397_3713390_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
AWF21659.1\|3713452_3714592_-	peptidase M23 family protein	D7RWE0	Brochothrix_phage	1.7e-06	35.6
AWF20219.1\|3714731_3715358_-	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
AWF22981.1\|3715351_3716113_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0

DBSCAN-SWA_10

3850458 : 3865524

Streptococcus_phage(25.0%)

head,integrase,transposase

attL 3852923:3852939|attR 3861905:3861921

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWF21266.1\|3850458_3850899_+\|transposase	putative transposase DDE domain protein	NA	NA	NA	NA
AWF21911.1\|3850853_3851570_+\|transposase	transposase DDE domain protein	NA	NA	NA	NA
AWF19350.1\|3851972_3852767_-	hypothetical protein	NA	NA	NA	NA
3852923:3852939	attL	NA	NA	NA	NA
AWF20442.1\|3853361_3854489_-	hypothetical protein	NA	NA	NA	NA
AWF19178.1\|3854583_3854994_-	hypothetical protein	NA	NA	NA	NA
AWF18999.1\|3855350_3855842_-	hypothetical protein	NA	NA	NA	NA
AWF21073.1\|3856081_3856213_+	hypothetical protein	NA	NA	NA	NA
AWF20119.1\|3856941_3857238_-	hypothetical protein	M1PSB6	Streptococcus_phage	4.8e-17	43.0
AWF23543.1\|3857574_3858384_-\|integrase	phage integrase family protein	NA	NA	NA	NA
AWF21066.1\|3858564_3860106_+\|integrase	integrase core domain protein	K4I413	Acidithiobacillus_phage	7.5e-130	46.4
AWF20594.1\|3860117_3860867_+	istB-like ATP binding family protein	U5N3V8	Enterobacteria_phage	3.5e-24	31.6
AWF21923.1\|3860937_3861624_-\|integrase	putative integrase domain protein	NA	NA	NA	NA
AWF22223.1\|3862056_3862812_-	peptidase M23 family protein	A0A7K9	Microcystis_virus	3.8e-10	40.6
3861905:3861921	attR	NA	NA	NA	NA
AWF21520.1\|3863226_3865524_+\|head	aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain protein	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP029113

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP029117

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP029118

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. CP029115

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection