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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP029185 Limnobaculum parvum strain HYN0051 chromosome, complete genome 2 crisprs DEDDh,cas3,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e 1 10 4 0

Results visualization

1. CP029185
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029185_1 1380518-1380626 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029185_2 2178747-2180240 TypeI-E I-E
24 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP029185_2 2.16|2179692|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179692-2179723 32 CP029185.2 2286374-2286405 0 1.0

1. spacer 2.16|2179692|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to position: 2286374-2286405, mismatch: 0, identity: 1.0

tacaaaacgataagattgcagcgagatgcgct	CRISPR spacer
tacaaaacgataagattgcagcgagatgcgct	Protospacer
********************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP029185_2 2.3|2178899|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2178899-2178930 32 NC_018452 Burkholderia phage DC1, complete genome 27349-27380 5 0.844
CP029185_2 2.3|2178899|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2178899-2178930 32 NC_016767 Erwinia phage PEp14, complete genome 5900-5931 5 0.844
CP029185_2 2.3|2178899|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2178899-2178930 32 NZ_CP024314 Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence 880115-880146 6 0.812
CP029185_2 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2180119-2180150 32 NZ_CP045299 Kosakonia arachidis strain KACC 18508 plasmid unnamed1, complete sequence 38865-38896 6 0.812
CP029185_2 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2180119-2180150 32 NC_021492 Enterobacter sp. R4-368 plasmid pENT01, complete sequence 106484-106515 6 0.812
CP029185_2 2.6|2179082|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179082-2179113 32 NZ_CP017663 Cronobacter sp. JZ38 plasmid unnamed1, complete sequence 99063-99094 7 0.781
CP029185_2 2.6|2179082|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179082-2179113 32 NZ_LR214939 Mycoplasma salivarium strain NCTC10113 plasmid 2 690891-690922 8 0.75
CP029185_2 2.6|2179082|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179082-2179113 32 NZ_CP017949 Tenericutes bacterium MO-XQ plasmid unnamed, complete sequence 36994-37025 8 0.75
CP029185_2 2.8|2179204|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179204-2179235 32 NZ_CP017416 Campylobacter jejuni strain MTVDSCj07 plasmid pMTVDSCj07-1, complete sequence 18310-18341 8 0.75
CP029185_2 2.18|2179814|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179814-2179845 32 AP018715 Enterococcus phage phiM1EF22 DNA, complete sequence 49115-49146 8 0.75
CP029185_2 2.18|2179814|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179814-2179845 32 MK721192 Enterococcus phage vB_EfaM_Ef2.3, complete genome 88030-88061 8 0.75
CP029185_2 2.18|2179814|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179814-2179845 32 MN854830 Enterococcus phage PBEF129, complete genome 83981-84012 8 0.75
CP029185_2 2.18|2179814|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179814-2179845 32 KJ801817 Enterococcus phage ECP3, complete genome 47591-47622 8 0.75
CP029185_2 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2180119-2180150 32 CP027110 Cronobacter sakazakii strain CS-09 plasmid pCsaCS09a, complete sequence 95362-95393 8 0.75
CP029185_2 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2180119-2180150 32 NZ_CP028976 Cronobacter sakazakii strain GZcsf-1 plasmid pGW2, complete sequence 10531-10562 8 0.75
CP029185_2 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2180119-2180150 32 NZ_CP012255 Cronobacter sakazakii strain NCTC 8155 plasmid pCS2, complete sequence 68498-68529 8 0.75
CP029185_2 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2180119-2180150 32 NZ_CP049260 Cronobacter sakazakii strain CS-931 plasmid pCsaCS931b, complete sequence 83359-83390 8 0.75
CP029185_2 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2180119-2180150 32 NC_020263 Cronobacter sakazakii SP291 plasmid pSP291-1, complete sequence 81922-81953 8 0.75
CP029185_2 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2180119-2180150 32 CP049261 Cronobacter sakazakii strain CS-09 plasmid pCsaCS09c, complete sequence 41925-41956 8 0.75
CP029185_2 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2180119-2180150 32 CP045779 Cronobacter sakazakii strain CFSAN068773 plasmid p1CFSAN068773, complete sequence 41455-41486 8 0.75
CP029185_2 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2180119-2180150 32 NC_009780 Cronobacter sakazakii ATCC BAA-894 plasmid pESA3, complete sequence 94982-95013 8 0.75
CP029185_2 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2180119-2180150 32 NZ_CP011048 Cronobacter sakazakii strain ATCC 29544 plasmid CSK29544_1p, complete sequence 673-704 8 0.75
CP029185_2 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2180119-2180150 32 NZ_KY978630 Cronobacter sakazakii strain 505108 plasmid p505108-T6SS, complete sequence 103765-103796 8 0.75
CP029185_2 2.4|2178960|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2178960-2178991 32 NZ_CP038614 Arsenophonus nasoniae strain FIN plasmid pArsFIN2, complete sequence 122289-122320 9 0.719
CP029185_2 2.4|2178960|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2178960-2178991 32 NZ_CP038617 Arsenophonus nasoniae strain FIN plasmid pArsFIN5, complete sequence 86585-86616 9 0.719
CP029185_2 2.4|2178960|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2178960-2178991 32 CP013001 Bacillus thuringiensis strain XL6 plasmid, complete sequence 118706-118737 9 0.719
CP029185_2 2.8|2179204|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179204-2179235 32 NZ_LR214939 Mycoplasma salivarium strain NCTC10113 plasmid 2 174612-174643 9 0.719
CP029185_2 2.16|2179692|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179692-2179723 32 MG030346 Proteus phage PM87, complete genome 46366-46397 9 0.719
CP029185_2 2.16|2179692|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179692-2179723 32 CP059058 Proteus phage ASh-2020a, complete genome 27940-27971 9 0.719
CP029185_2 2.16|2179692|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179692-2179723 32 MN840486 Proteus phage P16-2532, complete genome 46238-46269 9 0.719
CP029185_2 2.16|2179692|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179692-2179723 32 MN604053 Escherichia phage E21, complete genome 1809-1840 9 0.719
CP029185_2 2.18|2179814|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179814-2179845 32 MK268686 Enterococcus phage vB_EfaH_EF1TV, complete genome 84051-84082 9 0.719
CP029185_2 2.20|2179936|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179936-2179967 32 NC_014825 Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL02, complete sequence 268409-268440 9 0.719
CP029185_2 2.6|2179082|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179082-2179113 32 NZ_CP022055 Staphylococcus saprophyticus strain FDAARGOS_336 plasmid unnamed1, complete sequence 800-831 10 0.688
CP029185_2 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179265-2179296 32 NZ_CP019253 Escherichia coli strain 13KWH46 plasmid p13KWH46-3, complete sequence 70333-70364 10 0.688
CP029185_2 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179265-2179296 32 NZ_CP033634 Escherichia coli isolate ECCNB12-2 plasmid pTB-nb3, complete sequence 15086-15117 10 0.688
CP029185_2 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179265-2179296 32 NZ_CP023144 Escherichia coli strain CFSAN061770 plasmid pEGY2, complete sequence 15425-15456 10 0.688
CP029185_2 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179265-2179296 32 NZ_CP032880 Escherichia coli strain SCEC020022 plasmid p1_020022, complete sequence 3321-3352 10 0.688
CP029185_2 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179265-2179296 32 MN335919 Escherichia coli strain SD-2 plasmid pNDM-T2, complete sequence 26558-26589 10 0.688
CP029185_2 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179265-2179296 32 MN335921 Escherichia coli strain SD-6 plasmid pNDM-T6, complete sequence 35605-35636 10 0.688
CP029185_2 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179265-2179296 32 MN276083 Escherichia coli strain GZ7DS11 plasmid pHN7DS11,complete sequence 34523-34554 10 0.688
CP029185_2 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179265-2179296 32 NZ_MG825375 Escherichia coli strain 1106 plasmid p1106-NDM, complete sequence 35234-35265 10 0.688
CP029185_2 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179265-2179296 32 NZ_MG838206 Escherichia coli strain 92944 plasmid p92944-NDM, complete sequence 33561-33592 10 0.688
CP029185_2 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179265-2179296 32 NZ_MG271839 Escherichia coli strain SDX5C138 plasmid pHNSD138-1, complete sequence 23709-23740 10 0.688
CP029185_2 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179265-2179296 32 NZ_MG825371 Escherichia coli strain 1106 plasmid p1106-IncFII, complete sequence 3324-3355 10 0.688
CP029185_2 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179265-2179296 32 NZ_MG196294 Escherichia coli strain THSJ02 plasmid pHNTH02-1, complete sequence 38573-38604 10 0.688
CP029185_2 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179265-2179296 32 NZ_MG545909 Escherichia coli strain EC013 plasmid pEC013, complete sequence 36737-36768 10 0.688
CP029185_2 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179265-2179296 32 NZ_KY689635 Escherichia coli strain Mbl536 plasmid pMbl536, complete sequence 42923-42954 10 0.688
CP029185_2 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179265-2179296 32 NZ_KY565558 Escherichia coli strain Mbl488 plasmid pMbl488, complete sequence 43759-43790 10 0.688
CP029185_2 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179265-2179296 32 NZ_MG601057 Escherichia coli strain EC1107 plasmid pEC1107-NDM-116K, complete sequence 35254-35285 10 0.688
CP029185_2 2.21|2179997|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2179997-2180028 32 NZ_CP021805 Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence 969301-969332 10 0.688
CP029185_2 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR 2180119-2180150 32 NZ_CP039340 Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence 1408486-1408517 11 0.656

1. spacer 2.3|2178899|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NC_018452 (Burkholderia phage DC1, complete genome) position: , mismatch: 5, identity: 0.844

agacaatcatggatgagggggcggtcgacgac	CRISPR spacer
aggtcatcatggacgagggcgcggtcgacgac	Protospacer
**.. ********.***** ************

2. spacer 2.3|2178899|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NC_016767 (Erwinia phage PEp14, complete genome) position: , mismatch: 5, identity: 0.844

agacaatcatggatgagggggcggtcgacgac	CRISPR spacer
aggtcatcatggatgagggcgcggtagacgac	Protospacer
**.. ************** ***** ******

3. spacer 2.3|2178899|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 6, identity: 0.812

agacaatcatggatgagggggcggtcgacgac	CRISPR spacer
gcaagatcatggaagaggggccggtcgacgac	Protospacer
. * .******** ****** ***********

4. spacer 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045299 (Kosakonia arachidis strain KACC 18508 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

cagtttttcacccagcagccgtt-gttcgcgat	CRISPR spacer
cagtttttcccgcagcagccgttcggtcagga-	Protospacer
********* * *********** * **. ** 

5. spacer 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NC_021492 (Enterobacter sp. R4-368 plasmid pENT01, complete sequence) position: , mismatch: 6, identity: 0.812

cagtttttcacccagcagccgtt-gttcgcgat	CRISPR spacer
cagtttttcgcgcagcagccgttcggtcagga-	Protospacer
*********.* *********** * **. ** 

6. spacer 2.6|2179082|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017663 (Cronobacter sp. JZ38 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

cagtaac-tttttctcatgttttaaataatcat	CRISPR spacer
-agccacatttttctcacgctttaaataatctc	Protospacer
 **. ** *********.*.*********** .

7. spacer 2.6|2179082|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 8, identity: 0.75

cagtaactttttctcatgttttaaataatcat	CRISPR spacer
cgccaactttttctaatgttttaaatattacg	Protospacer
*. .********** ************ *   

8. spacer 2.6|2179082|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017949 (Tenericutes bacterium MO-XQ plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cagtaactttttctcatgttttaaataatcat	CRISPR spacer
ccatgcttttttctcatcttttaaattatcaa	Protospacer
* .*. .********** ******** **** 

9. spacer 2.8|2179204|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017416 (Campylobacter jejuni strain MTVDSCj07 plasmid pMTVDSCj07-1, complete sequence) position: , mismatch: 8, identity: 0.75

gagaaaaatgtcatgtttgagatgacagccag	CRISPR spacer
gagaaaaatctcatttttgagatgaaaaagga	Protospacer
********* **** ********** *.  ..

10. spacer 2.18|2179814|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to AP018715 (Enterococcus phage phiM1EF22 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

tcggaccatgcaggaccgaagtggtatccatc	CRISPR spacer
gctttatatgcaggactgaattggtatccatc	Protospacer
 *    .*********.*** ***********

11. spacer 2.18|2179814|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to MK721192 (Enterococcus phage vB_EfaM_Ef2.3, complete genome) position: , mismatch: 8, identity: 0.75

tcggaccatgcaggaccgaagtggtatccatc	CRISPR spacer
gctttatatgcaggactgaattggtatccatc	Protospacer
 *    .*********.*** ***********

12. spacer 2.18|2179814|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to MN854830 (Enterococcus phage PBEF129, complete genome) position: , mismatch: 8, identity: 0.75

tcggaccatgcaggaccgaagtggtatccatc	CRISPR spacer
gctttatatgcaggactgaattggtatccatc	Protospacer
 *    .*********.*** ***********

13. spacer 2.18|2179814|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to KJ801817 (Enterococcus phage ECP3, complete genome) position: , mismatch: 8, identity: 0.75

tcggaccatgcaggaccgaagtggtatccatc	CRISPR spacer
gctttatatgcaggactgaattggtatccatc	Protospacer
 *    .*********.*** ***********

14. spacer 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to CP027110 (Cronobacter sakazakii strain CS-09 plasmid pCsaCS09a, complete sequence) position: , mismatch: 8, identity: 0.75

cagtttttcacccagcagccgttgttcgcgat	CRISPR spacer
caaatcgtcacccagcatccgtttttcgcgcg	Protospacer
**. *. ********** ***** ******  

15. spacer 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028976 (Cronobacter sakazakii strain GZcsf-1 plasmid pGW2, complete sequence) position: , mismatch: 8, identity: 0.75

cagtttttcacccagcagccgttgttcgcgat	CRISPR spacer
caaatcgtcacccagcatccgtttttcgcgcg	Protospacer
**. *. ********** ***** ******  

16. spacer 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012255 (Cronobacter sakazakii strain NCTC 8155 plasmid pCS2, complete sequence) position: , mismatch: 8, identity: 0.75

cagtttttcacccagcagccgttgttcgcgat	CRISPR spacer
caaatcgtcacccagcatccgtttttcgcgcg	Protospacer
**. *. ********** ***** ******  

17. spacer 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049260 (Cronobacter sakazakii strain CS-931 plasmid pCsaCS931b, complete sequence) position: , mismatch: 8, identity: 0.75

cagtttttcacccagcagccgttgttcgcgat	CRISPR spacer
caaatcgtcacccagcatccgtttttcgcgcg	Protospacer
**. *. ********** ***** ******  

18. spacer 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NC_020263 (Cronobacter sakazakii SP291 plasmid pSP291-1, complete sequence) position: , mismatch: 8, identity: 0.75

cagtttttcacccagcagccgttgttcgcgat	CRISPR spacer
caaatcgtcacccagcatccgtttttcgcgcg	Protospacer
**. *. ********** ***** ******  

19. spacer 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to CP049261 (Cronobacter sakazakii strain CS-09 plasmid pCsaCS09c, complete sequence) position: , mismatch: 8, identity: 0.75

cagtttttcacccagcagccgttgttcgcgat	CRISPR spacer
caaatcgtcacccagcatccgtttttcgcgcg	Protospacer
**. *. ********** ***** ******  

20. spacer 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to CP045779 (Cronobacter sakazakii strain CFSAN068773 plasmid p1CFSAN068773, complete sequence) position: , mismatch: 8, identity: 0.75

cagtttttcacccagcagccgttgttcgcgat	CRISPR spacer
caaatcgtcacccagcatccgtttttcgcgcg	Protospacer
**. *. ********** ***** ******  

21. spacer 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NC_009780 (Cronobacter sakazakii ATCC BAA-894 plasmid pESA3, complete sequence) position: , mismatch: 8, identity: 0.75

cagtttttcacccagcagccgttgttcgcgat	CRISPR spacer
caaatcgtcacccagcatccgtttttcgcgcg	Protospacer
**. *. ********** ***** ******  

22. spacer 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011048 (Cronobacter sakazakii strain ATCC 29544 plasmid CSK29544_1p, complete sequence) position: , mismatch: 8, identity: 0.75

cagtttttcacccagcagccgttgttcgcgat	CRISPR spacer
caaatcgtcacccagcatccgtttttcgcgcg	Protospacer
**. *. ********** ***** ******  

23. spacer 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY978630 (Cronobacter sakazakii strain 505108 plasmid p505108-T6SS, complete sequence) position: , mismatch: 8, identity: 0.75

cagtttttcacccagcagccgttgttcgcgat	CRISPR spacer
caaatcgtcacccagcatccgtttttcgcgcg	Protospacer
**. *. ********** ***** ******  

24. spacer 2.4|2178960|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038614 (Arsenophonus nasoniae strain FIN plasmid pArsFIN2, complete sequence) position: , mismatch: 9, identity: 0.719

accaaaaccagaaacagcaataacgaggcctg	CRISPR spacer
aatttaaccagaaacagcaagaactaggatgg	Protospacer
* .  *************** *** *** . *

25. spacer 2.4|2178960|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038617 (Arsenophonus nasoniae strain FIN plasmid pArsFIN5, complete sequence) position: , mismatch: 9, identity: 0.719

accaaaaccagaaacagcaataacgaggcctg	CRISPR spacer
aatttaaccagaaacagcaagaactaggatgg	Protospacer
* .  *************** *** *** . *

26. spacer 2.4|2178960|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

accaaaaccagaaacagcaataacgaggcctg	CRISPR spacer
cccaaaaccagaagtagcaataacataagctt	Protospacer
 ************..*********. .. ** 

27. spacer 2.8|2179204|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 9, identity: 0.719

gagaaaaatgtcatgtttgagatgacagccag	CRISPR spacer
tagacacatgtcatgtttgagatgcaggttat	Protospacer
 *** * *****************  .*..* 

28. spacer 2.16|2179692|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to MG030346 (Proteus phage PM87, complete genome) position: , mismatch: 9, identity: 0.719

tacaaaacgataagattgcagcgagatgcgct	CRISPR spacer
ggaaaaacgataagaatgcagctagaggagaa	Protospacer
 . ************ ****** *** * *  

29. spacer 2.16|2179692|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to CP059058 (Proteus phage ASh-2020a, complete genome) position: , mismatch: 9, identity: 0.719

tacaaaacgataagattgcagcgagatgcgct	CRISPR spacer
ggaaaaacgataagaatgcagctagaggagaa	Protospacer
 . ************ ****** *** * *  

30. spacer 2.16|2179692|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to MN840486 (Proteus phage P16-2532, complete genome) position: , mismatch: 9, identity: 0.719

tacaaaacgataagattgcagcgagatgcgct	CRISPR spacer
ggaaaaacgataagaatgcagctagaggagaa	Protospacer
 . ************ ****** *** * *  

31. spacer 2.16|2179692|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to MN604053 (Escherichia phage E21, complete genome) position: , mismatch: 9, identity: 0.719

tacaaaacgataagattgcagcgagatgcgct	CRISPR spacer
ggaaaaacgataagaatgcagctagaggagaa	Protospacer
 . ************ ****** *** * *  

32. spacer 2.18|2179814|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to MK268686 (Enterococcus phage vB_EfaH_EF1TV, complete genome) position: , mismatch: 9, identity: 0.719

tcggaccatgcaggaccgaagtggtatccatc	CRISPR spacer
gctttatacgcaggactgaattggtatccatc	Protospacer
 *    .*.*******.*** ***********

33. spacer 2.20|2179936|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NC_014825 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL02, complete sequence) position: , mismatch: 9, identity: 0.719

tcgcatgcgaaatttttatgctgttattttgg	CRISPR spacer
tttctctcgaaatctttatgctgctattttct	Protospacer
*. * . ******.*********.******  

34. spacer 2.6|2179082|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022055 (Staphylococcus saprophyticus strain FDAARGOS_336 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cagtaactttttctcatgttttaaataatcat	CRISPR spacer
tttagggttattctcatgttttaaatattcac	Protospacer
.   .. ** ***************** ***.

35. spacer 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019253 (Escherichia coli strain 13KWH46 plasmid p13KWH46-3, complete sequence) position: , mismatch: 10, identity: 0.688

tgcctcggcctgtaccggtagtggcggatgtt	CRISPR spacer
tcattccgcctgtaccggaagtggcggtacca	Protospacer
*  .** *********** ********   . 

36. spacer 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033634 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb3, complete sequence) position: , mismatch: 10, identity: 0.688

tgcctcggcctgtaccggtagtggcggatgtt	CRISPR spacer
tcattccgcctgtaccggaagtggcggtacca	Protospacer
*  .** *********** ********   . 

37. spacer 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023144 (Escherichia coli strain CFSAN061770 plasmid pEGY2, complete sequence) position: , mismatch: 10, identity: 0.688

tgcctcggcctgtaccggtagtggcggatgtt	CRISPR spacer
tcattccgcctgtaccggaagtggcggtacca	Protospacer
*  .** *********** ********   . 

38. spacer 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032880 (Escherichia coli strain SCEC020022 plasmid p1_020022, complete sequence) position: , mismatch: 10, identity: 0.688

tgcctcggcctgtaccggtagtggcggatgtt	CRISPR spacer
tcattccgcctgtaccggaagtggcggtacca	Protospacer
*  .** *********** ********   . 

39. spacer 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to MN335919 (Escherichia coli strain SD-2 plasmid pNDM-T2, complete sequence) position: , mismatch: 10, identity: 0.688

tgcctcggcctgtaccggtagtggcggatgtt	CRISPR spacer
tcattccgcctgtaccggaagtggcggtacca	Protospacer
*  .** *********** ********   . 

40. spacer 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to MN335921 (Escherichia coli strain SD-6 plasmid pNDM-T6, complete sequence) position: , mismatch: 10, identity: 0.688

tgcctcggcctgtaccggtagtggcggatgtt	CRISPR spacer
tcattccgcctgtaccggaagtggcggtacca	Protospacer
*  .** *********** ********   . 

41. spacer 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to MN276083 (Escherichia coli strain GZ7DS11 plasmid pHN7DS11,complete sequence) position: , mismatch: 10, identity: 0.688

tgcctcggcctgtaccggtagtggcggatgtt	CRISPR spacer
tcattccgcctgtaccggaagtggcggtacca	Protospacer
*  .** *********** ********   . 

42. spacer 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG825375 (Escherichia coli strain 1106 plasmid p1106-NDM, complete sequence) position: , mismatch: 10, identity: 0.688

tgcctcggcctgtaccggtagtggcggatgtt	CRISPR spacer
tcattccgcctgtaccggaagtggcggtacca	Protospacer
*  .** *********** ********   . 

43. spacer 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG838206 (Escherichia coli strain 92944 plasmid p92944-NDM, complete sequence) position: , mismatch: 10, identity: 0.688

tgcctcggcctgtaccggtagtggcggatgtt	CRISPR spacer
tcattccgcctgtaccggaagtggcggtacca	Protospacer
*  .** *********** ********   . 

44. spacer 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG271839 (Escherichia coli strain SDX5C138 plasmid pHNSD138-1, complete sequence) position: , mismatch: 10, identity: 0.688

tgcctcggcctgtaccggtagtggcggatgtt	CRISPR spacer
tcattccgcctgtaccggaagtggcggtacca	Protospacer
*  .** *********** ********   . 

45. spacer 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG825371 (Escherichia coli strain 1106 plasmid p1106-IncFII, complete sequence) position: , mismatch: 10, identity: 0.688

tgcctcggcctgtaccggtagtggcggatgtt	CRISPR spacer
tcattccgcctgtaccggaagtggcggtacca	Protospacer
*  .** *********** ********   . 

46. spacer 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG196294 (Escherichia coli strain THSJ02 plasmid pHNTH02-1, complete sequence) position: , mismatch: 10, identity: 0.688

tgcctcggcctgtaccggtagtggcggatgtt	CRISPR spacer
tcattccgcctgtaccggaagtggcggtacca	Protospacer
*  .** *********** ********   . 

47. spacer 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG545909 (Escherichia coli strain EC013 plasmid pEC013, complete sequence) position: , mismatch: 10, identity: 0.688

tgcctcggcctgtaccggtagtggcggatgtt	CRISPR spacer
tcattccgcctgtaccggaagtggcggtacca	Protospacer
*  .** *********** ********   . 

48. spacer 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY689635 (Escherichia coli strain Mbl536 plasmid pMbl536, complete sequence) position: , mismatch: 10, identity: 0.688

tgcctcggcctgtaccggtagtggcggatgtt	CRISPR spacer
tcattccgcctgtaccggaagtggcggtacca	Protospacer
*  .** *********** ********   . 

49. spacer 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY565558 (Escherichia coli strain Mbl488 plasmid pMbl488, complete sequence) position: , mismatch: 10, identity: 0.688

tgcctcggcctgtaccggtagtggcggatgtt	CRISPR spacer
tcattccgcctgtaccggaagtggcggtacca	Protospacer
*  .** *********** ********   . 

50. spacer 2.9|2179265|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG601057 (Escherichia coli strain EC1107 plasmid pEC1107-NDM-116K, complete sequence) position: , mismatch: 10, identity: 0.688

tgcctcggcctgtaccggtagtggcggatgtt	CRISPR spacer
tcattccgcctgtaccggaagtggcggtacca	Protospacer
*  .** *********** ********   . 

51. spacer 2.21|2179997|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

gaatactgctgatatgatccatgtagtggatg	CRISPR spacer
tctctgcgctggtgtgatccatgtagtggagg	Protospacer
   .  .****.*.**************** *

52. spacer 2.23|2180119|32|CP029185|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 11, identity: 0.656

cagtttttcacccagcagccgttgttcgcgat	CRISPR spacer
atcgacttcagccagcagcagttgttcgccgc	Protospacer
     .**** ******** ********* ..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1091897 : 1100104 8 Catovirus(33.33%) transposase NA
DBSCAN-SWA_2 1567827 : 1575648 8 Phage_21(42.86%) integrase attL 1568918:1568977|attR 1573626:1573779
DBSCAN-SWA_3 1616126 : 1675418 50 Bodo_saltans_virus(16.67%) tRNA,protease,plate NA
DBSCAN-SWA_4 2660559 : 2682011 23 Erwinia_phage(50.0%) plate,holin,tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage