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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP029231 Sinorhizobium fredii CCBAU 45436 chromosome, complete genome 0 crisprs csa3,WYL,cas3,DEDDh 0 0 4 0
CP029232 Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence 0 crisprs csa3,PD-DExK 0 0 2 0
CP029235 Sinorhizobium fredii CCBAU 45436 plasmid pSF45436e, complete sequence 0 crisprs NA 0 0 0 0
CP029234 Sinorhizobium fredii CCBAU 45436 plasmid pSF45436d, complete sequence 0 crisprs NA 0 0 1 0
CP029233 Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence 0 crisprs RT 0 0 0 0

Results visualization

1. CP029231
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1274265 : 1288407 15 uncultured_Mediterranean_phage(81.82%) NA NA
DBSCAN-SWA_2 1443638 : 1482138 53 Sinorhizobium_phage(82.05%) NA NA
DBSCAN-SWA_3 1602283 : 1611533 13 Klosneuvirus(14.29%) NA NA
DBSCAN-SWA_4 1884315 : 1899927 16 Sulfitobacter_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP029232
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 535138 : 542690 9 Sinorhizobium_phage(50.0%) NA NA
DBSCAN-SWA_2 549162 : 557442 8 uncultured_Mediterranean_phage(66.67%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP029234
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 17449 : 24473 10 uncultured_virus(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage