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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP022193 Yangia pacifica strain YSBP01 plasmid unnamed3, complete sequence 0 crisprs csa3 0 0 18 0
CP022191 Yangia pacifica strain YSBP01 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 0 0
CP022190 Yangia pacifica strain YSBP01 chromosome 2, complete sequence 0 crisprs cas3,csa3,WYL 0 0 2 0
CP022189 Yangia pacifica strain YSBP01 chromosome 1, complete sequence 0 crisprs csa3,DEDDh,WYL,cas3 0 0 2 0
CP022194 Yangia pacifica strain YSBP01 plasmid unnamed4, complete sequence 0 crisprs NA 0 0 0 0
CP022195 Yangia pacifica strain YSBP01 plasmid unnamed5, complete sequence 0 crisprs NA 0 0 0 0
CP022192 Yangia pacifica strain YSBP01 plasmid unnamed2, complete sequence 0 crisprs DEDDh 0 0 0 0

Results visualization

1. CP022193
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 8894 7 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_2 16483 : 17233 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_3 22562 : 23294 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_4 27044 : 28067 1 unidentified_phage(100.0%) transposase NA
DBSCAN-SWA_5 35976 : 38409 3 Bacillus_virus(66.67%) tRNA NA
DBSCAN-SWA_6 60798 : 65516 4 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_7 77068 : 78145 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_8 88148 : 92477 4 Moumouvirus(50.0%) NA NA
DBSCAN-SWA_9 100551 : 101292 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_10 110446 : 111442 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_11 119295 : 120261 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_12 127762 : 129270 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_13 137085 : 138786 1 Hepacivirus(100.0%) NA NA
DBSCAN-SWA_14 147543 : 149572 2 environmental_halophage(50.0%) NA NA
DBSCAN-SWA_15 156446 : 157214 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_16 164764 : 166477 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_17 174315 : 174822 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_18 178799 : 179990 1 Rhizobium_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP022189
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 994992 : 1023691 37 Thiobacimonas_phage(84.38%) tail,transposase NA
DBSCAN-SWA_2 1324866 : 1345461 25 Paracoccus_phage(30.0%) tail,capsid,portal,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP022190
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 552477 : 577675 27 Rhodobacter_phage(26.32%) portal,tail,head,capsid,terminase NA
DBSCAN-SWA_2 1208990 : 1257470 35 Vibrio_phage(50.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage