CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP029173	Methylobacterium sp. DM1 chromosome, complete genome	6 crisprs	DEDDh,csa3,cas3,Cas9_archaeal	3	7	5	0
CP029174	Methylobacterium sp. DM1 plasmid pLVM1, complete sequence	0 crisprs	NA	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP029173_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029173_2

1157772-1157857

Orphan

Consensus_repeat	Method
GCCACCTTTCGGGATGATGCTCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029173_2

>merge|CP029173|2|1157772-1157857|CRISPRCasFinder
GCCACCTTTCGGGATGATGCTCTAGTTCATTGTTTTTGCATCATCTTTTCCGAAAGCCGGCAGCCACCTTTCGGGATGATGCTCTA

>CP029173|2|2|1157772-1157857|CRISPRCasFinder
GCCACCTTTCGGGATGATGCTCTA	GTTCATTGTTTTTGCATCATCTTTTCCGAAAGCCGGCA
GCCACCTTTCGGGATGATGCTCTA

Protein	Signature genes	Signature genes Name	Protein_function
CP029173.1\|AWI87778.1\|1152453_1153044_-\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|369881
CP029173.1\|AWI87780.1\|1154234_1154663_+\|TIGR01244-family-phosphatase	unknown	unknown	gnl\|CDD\|225984
CP029173.1\|AWI87781.1\|1154670_1155423_-\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|237252
CP029173.1\|AWI87791.1\|1168257_1169946_-\|chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
CP029173.1\|AWI87792.1\|1170320_1171007_+\|septum-formation-inhibitor-MinC	unknown	unknown	gnl\|CDD\|235357
CP029173.1\|AWI87793.1\|1171019_1171835_+\|septum-site-determining-protein-MinD	unknown	unknown	gnl\|CDD\|225447
CP029173.1\|AWI87788.1\|1164243_1164984_-\|septum-formation-inhibitor-MinC	unknown	unknown	gnl\|CDD\|235357
CP029173.1\|AWI87783.1\|1156856_1157702_-\|class-III-aminotransferase	unknown	unknown	gnl\|CDD\|377562
CP029173.1\|AWI87777.1\|1151121_1152276_-\|acyltransferase	unknown	unknown	gnl\|CDD\|227104
CP029173.1\|AWI87786.1\|1162178_1163000_-\|sulfonate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223673
CP029173.1\|AWI87787.1\|1163013_1163994_-\|myristoyl-transferase	unknown	unknown	gnl\|CDD\|270271
CP029173.1\|AWI91557.1\|1159202_1161080_-\|ATPase	unknown	unknown	gnl\|CDD\|226654
CP029173.1\|AWI87782.1\|1155988_1156615_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225786
CP029173.1\|AWI91556.1\|1153620_1154004_-\|restriction-endonuclease	unknown	unknown	unknown
CP029173.1\|AWI87789.1\|1165182_1165941_-\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
CP029173.1\|AWI87776.1\|1150808_1151024_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371985
CP029173.1\|AWI87779.1\|1153195_1153477_-\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI87790.1\|1166243_1168070_+\|translational-GTPase-TypA	unknown	unknown	gnl\|CDD\|224138
CP029173.1\|AWI87775.1\|1148936_1150145_-\|flagellar-protein	unknown	unknown	gnl\|CDD\|173171
CP029173.1\|AWI87785.1\|1161300_1162170_-\|sulfonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224041

Protein	Function_ID	Function_description	E-value
CP029173.1\|AWI87778.1\|1152453_1153044_-\|diguanylate-cyclase	gnl\|CDD\|369881	pfam08447, PAS_3, PAS fold. The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs. The PAS fold appears in archaea, eubacteria and eukarya.	7.53294e-07
CP029173.1\|AWI87780.1\|1154234_1154663_+\|TIGR01244-family-phosphatase	gnl\|CDD\|225984	COG3453, COG3453, Uncharacterized protein conserved in bacteria [Function unknown].	8.15204e-47
CP029173.1\|AWI87781.1\|1154670_1155423_-\|type-I-methionyl-aminopeptidase	gnl\|CDD\|237252	PRK12896, PRK12896, methionine aminopeptidase; Reviewed.	2.84254e-157
CP029173.1\|AWI87791.1\|1168257_1169946_-\|chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	3.16067e-38
CP029173.1\|AWI87792.1\|1170320_1171007_+\|septum-formation-inhibitor-MinC	gnl\|CDD\|235357	PRK05177, minC, septum formation inhibitor MinC.	1.55888e-116
CP029173.1\|AWI87793.1\|1171019_1171835_+\|septum-site-determining-protein-MinD	gnl\|CDD\|225447	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning].	2.16101e-155
CP029173.1\|AWI87788.1\|1164243_1164984_-\|septum-formation-inhibitor-MinC	gnl\|CDD\|235357	PRK05177, minC, septum formation inhibitor MinC.	4.17686e-123
CP029173.1\|AWI87783.1\|1156856_1157702_-\|class-III-aminotransferase	gnl\|CDD\|377562	pfam05853, BKACE, beta-keto acid cleavage enzyme. BKACE, beta-keto acid cleavage enzyme plays, a role in lysine degradation. In certain instances it catalyzes the conversion of 3-keto-5-aminohexanoate and acetyl-CoA into acetoacetate and 3-aminobutyryl-CoA. The family is found to have at least 14 slightly different potential new enzymatic activities, all of which can therefore be designated as beta-keto acid cleavage enzymes.	1.86503e-78
CP029173.1\|AWI87777.1\|1151121_1152276_-\|acyltransferase	gnl\|CDD\|227104	COG4763, COG4763, Predicted membrane protein [Function unknown].	9.18247e-40
CP029173.1\|AWI87786.1\|1162178_1163000_-\|sulfonate-ABC-transporter-permease	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	6.65135e-78
CP029173.1\|AWI87787.1\|1163013_1163994_-\|myristoyl-transferase	gnl\|CDD\|270271	cd13553, PBP2_NrtA_CpmA_like, Substrate binding domain of ABC-type nitrate/bicarbonate transporters, a member of the type 2 periplasmic binding fold superfamily. This subfamily includes nitrate (NrtA) and bicarbonate (CmpA) receptors. These domains are found in eubacterial perisplamic-binding proteins that serve as initial receptors in the ABC transport of bicarbonate, nitrate, taurine, or a wide range of aliphatic sulfonates, while other closest homologs are involved in thiamine (vitamin B1) biosynthetic pathway and desulfurization (DszB). After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. These binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.63972e-45
CP029173.1\|AWI87785.1\|1161300_1162170_-\|sulfonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	6.74997e-128
CP029173.1\|AWI87782.1\|1155988_1156615_+\|hypothetical-protein	gnl\|CDD\|225786	COG3247, HdeD, Uncharacterized conserved protein [Function unknown].	1.13948e-23
CP029173.1\|AWI87789.1\|1165182_1165941_-\|SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.83019e-15
CP029173.1\|AWI87776.1\|1150808_1151024_-\|hypothetical-protein	gnl\|CDD\|371985	pfam12244, DUF3606, Protein of unknown function (DUF3606). This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.	1.11885e-13
CP029173.1\|AWI87790.1\|1166243_1168070_+\|translational-GTPase-TypA	gnl\|CDD\|224138	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].	0
CP029173.1\|AWI87775.1\|1148936_1150145_-\|flagellar-protein	gnl\|CDD\|173171	PRK14708, PRK14708, flagellin; Provisional.	3.31857e-31
CP029173.1\|AWI91557.1\|1159202_1161080_-\|ATPase	gnl\|CDD\|226654	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].	0

>CP029173.1|AWI87783.1|1156856_1157702_-|class-III-aminotransferase
MTNDSGWPPLILANAPNGATRTKADHPALPITPAEIARTAAEIAEAGAALIHVHARDGEGRHLLDAEAYRAVTAAIRAEVGDRLVVQITSEAAGRYQAPEQMAVVRATRPEAVSLALREIVPDAAAESAAAEFFAFARRERILLQIILYEAAEVTRYAELKNRGVLDEGEDFPLFVLGRYTPGQVSRPADLLPFLAAAGAGLPLWAICAFGPRENACALVAAGLGGHVRVGFENSLLAPDGRPAESNAAQIRRAAEGARGLGRPLADADTARAMMAGSGPV
>CP029173.1|AWI87782.1|1155988_1156615_+|hypothetical-protein
MAGASETSGVVPPSDLPQTGPARLDAMSAVLARNWWLVALRGLLAILFGAIAFVAPGAFVLSLVLFFSAYMLVDGAFGIVAAVRAARQHERWGFLLLEGLLDIVVGVAAFLVPAAAVWAFVLLVAAWAILSGGLMIAAAFRLHLDYGRWWLGLGGLVSVLFGIVLLINPGMSALVLTWWLGAYAVAFGVMLLILGFRLRSRHAATGRP
>CP029173.1|AWI87781.1|1154670_1155423_-|type-I-methionyl-aminopeptidase
MTVSNDDELAGLKRIGRIVADTLAVMGEAIEPGMTTRELDDVGRAFLEAAGARSAPETVYGFPGATCISVNEEIAHGIPGERRIAPGDLVNIDVSAQMHGYFSDTGASFAVPPVTRAVERLCKDGRRAMWTGLRQVGAGKPLAGIGRAVGSFAHKNGYTLVRNLASHGVGLSLHEEPTEIATWPDPSERRIMREGMVLTVEPFLSLGADFAEDGDDPWTLYSRPRALTVQYEHTVVATRNGPMILTMPGQ
>CP029173.1|AWI87780.1|1154234_1154663_+|TIGR01244-family-phosphatase
MKRTTIDSKLTVAHQPRLAEIEALGAEGVRLLINNRPDGEELGQPGAAAERVAAEAAGLGYLDLPVTGPTLTRADVERFHAAVEAAPGPVVAHCRSGTRSLTLWVIGEVLAGHLRRDEVAAYGARHGYDLSGAERWLEANAG
>CP029173.1|AWI91556.1|1153620_1154004_-|restriction-endonuclease
MVGRRSHRWRDADPETHGPKRVALPICPLCERPIPTHARQSLHHLTPKLKGGAHGATVRLHQICHSAIHAHYSEAEIARRLAEVEALRADPEIARFLEWVHGKPDDFHAPTRLTRARRGNGGLRRKG
>CP029173.1|AWI87779.1|1153195_1153477_-|hypothetical-protein
MFEMRHEKLIDERRQCVTLRAFFAASQEQGDALPSSVITHISASAAHNGFALRVERQEPALAVRIYMQVMNLFRIAERSDWNAKHICEFTQAI
>CP029173.1|AWI87778.1|1152453_1153044_-|diguanylate-cyclase
MPYDTGRYWLGSLPDTSIASQVGAWETDLRNDRTVADAITAGLFNLDPWQAAIGLPLADYAEAILPADREEFFTNIDRVSEHGGLFVGEYRVCSAASGVRWVLARGYYERDDSTGDVVGRGIVVNTTESKLKRPVGDRAFFILHRNEPPLERLAACALQARRTIDEVGEHEKPALRPAVDALLWAVGRVLAKRGCF
>CP029173.1|AWI87777.1|1151121_1152276_-|acyltransferase
MTAASTAATRPLRPHPEEAARLAWVDVAKGLCIILVVMMHSTLGTGEALGGEGFLHDVVEFARPFRIPDFFLLSGLFLGRVIDRDWRLFADRRVVHFAYFYALWVVIQSLFKAGSIVAGAVGPADTLAAFGLHLAEALVVPYSTLWFVYLLAVFSVVTKLLHRRVPPAVLLVAAAALQILPTHGLPELLDEFCERYVYFLGGYLFAEWIFRFADRVRERVGLALAGLALWAVLEAVFVFTPTGIESMPTLARLPVVSLGLGTVGALAIVAFAALMTRAGGPVTAALRACGERSIVIYLGFFLPMALTRTVIARFNGALPDLALNVGLASLVVTVAAVTVPLAFERLVRGTRFDVLFRRPAAFHIAAAPASPSRLRPGAVAPREA
>CP029173.1|AWI87776.1|1150808_1151024_-|hypothetical-protein
MVQEASDERHGVSGDPAKVVLDAPRDRAYWARRFEVSAEQVQAAVEAVGSDAARVAAHLGKPWPYDKSGIV
>CP029173.1|AWI87775.1|1148936_1150145_-|flagellar-protein
MSSGITLSAATRQNLLSLQDTSSLTATTQNRLATGLKVSSALDSPVNFFTAQNLSNRSTDLGGLLDGISNGVQAIQAGNQGITSIQKLIDSAKSTANQALSTQITTTGTAASDFSASTSSSTTVDFFVNGTKKTATIGGSPTAATIDAAITALNTQAGSTMFSKDTTGKKIVLNASAALELASTAGQTALGFAAGTGTATADKYGTGNTVAGNSANLTISGVETRTKLAEQYNGLLIQITQLAKDSSFNGINLISNGDASNKLHIAFNERDTANLEVQGQDLTADGLKLTSITGNSGATADGQGNFLLDADIKGTLTKLTAGSDTLRAASSTFGSNLSVVQNRQDFTKRIVNILDTGAANLTNADLNEEAANSQALSTRQSLGISALSLANQAQQGILQLLR
>CP029173.1|AWI91557.1|1159202_1161080_-|ATPase
MPFPRTKAVRALLLAVLAVAALLVVIKAGDVAEDRVAASLAGDARQRAEIYAQSLEGAIERFGFLPAAAALDPRVRALLAAPEDPAQVATVNAYLKRLSREAGAGVVYLLIPSGLTIAASNWDTPQTYVGQDFSYRPYFTEARGGRVGRFYAIGTLTGVPGYFISAPVIIDGTVRGVVATKVSLDSVEAIWREGTDRVLVADENGIVFLASDPALKFRATKPLDDAARARMERTRQYGRDDYRAIGFGRTEEVGGVPLINQSEAAPRGRALFEQQAMPAYGWTLLLFADAGPVAIAGRSARVGAILALIVLGLIGLYGSQHLRRVRENRAAQRELEAKVAARTADLRAANLRLAGEIEERTRAEGDLRETQGELVQAAKMATLGQMAAGITHELNQPLAALRGLADNASAFLRQGREGEAAANLTRIVALVDRLGKITGQLRSFSRRSGTERVAVDVGMAVSESLAILSSRIRDAGARVTTDLDPAAQWVVFEPIRLSQVLINLVGNALDAVKGRPGAEVAVRAWAGDGHVVLSVEDNGPGLDAAALNRIFDPFFTTKPAGEGLGLGLPISLAIAREFGASLQPRPMAGGGLAFDLVIDVAREMAQDSAGMAPPERGRQRIPHVS
>CP029173.1|AWI87785.1|1161300_1162170_-|sulfonate-ABC-transporter-ATP-binding-protein
MSVQPHPIASVTQDAVPVAPPMASTAAPHIVVSGVDKVFPVPGGEVVALKDIDLTINRGEFVCLLGPSGCGKSTLLNAIAGFSHPTRGGIAVEGRAVSEPGPDRGMVFQEYALFPWMSVAQNIAFGLEIKGMGRAAIEARVAELLDMLKLAEFRDRFPKDLSGGMRQRVAIARVLALDSPVMLMDEPFGALDALTRRSLQDELLRIWAATGKTIVFVTHSIEESIYLADRIVVLTYRPGTIKRDIRVELPRPRDSASAAFNALKRDLSALVTAEQHRFEEVEMKGLTTD
>CP029173.1|AWI87786.1|1162178_1163000_-|sulfonate-ABC-transporter-permease
MNASRLKPLAEGFAVPIAVLLIWQLACTAGLVNPMVLPSPAAVAVRWWSYLAPLEDYDPAHGSWFLWLFSGEMLHDAMASLYRVVVGFAVGAGLALPLGLFMGSSDLIYRHINPLMQVLRPIPPIAYIPLSILWFGLGNAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPYILSGARIGIGTAFIVVIVAEMIAVNNGLGFRILEAREYFWSDKIIAGMLTIGALGLVIDMAVSRLNNHLLRWHRGLES
>CP029173.1|AWI87787.1|1163013_1163994_-|myristoyl-transferase
MPVRRPLTRRRLATLAVATAAMLAPFPLSAQEVIRVGNLKLAHFAGVSYVKEIAKNCGITVDLKIFAKGPDIMQAMLAGELDVGATASEAAISARGNGAQVYIVGGFAKGGARLLATPESGIKSAADLKGKKVGVTRGSIQEVLLGAEMAKHGLKNRDVNLIFLGYPDLNQALLQKQVDAIMQTEPQSAQAIARGFGVEVIKPYDTPVGSPIRTLVMTEKFYNEKKPAAAKFMECFVKAQKTFMDDPKAAETFVTQDVFKGQLTGPEFQDALANSPYTLEMSADHIQKTTDVMAEHGIGKMSKPAKAVDWVKLDLLEAAKASAGTN
>CP029173.1|AWI87788.1|1164243_1164984_-|septum-formation-inhibitor-MinC
MTDRPPIRFRGRSFLAMVLAPVPPIDQWLAELDALKQRAPAFFAVRAIILDVTGLRFERSDLAHLCEELNRRSITILGIEGIGPTSLGPGFPPPLVGGKPVEDIAPPESGAAASAPAEAPTAQAAAPALMAPPAPPRPRSFVLDAPVRSGQVIQHLDGDVTVLGSVASGAEVIAGGSIHVYGALRGRAIAGAVGDPAARILARKFEPELIAIDGLYKTADDLGGSRWGQSVQARLEGDAIVLVPLD
>CP029173.1|AWI87789.1|1165182_1165941_-|SAM-dependent-methyltransferase
MTAFKDHFSTNNAGYAAHRPAYPPALVDFLADAAPDRDLALDVGCGTGQLSALLARRFAQVVAIDASAGQIAAAAPVERVRYHVAPAERSGLPDSRASLITVAQAAHWLDLAPFYDEVRRAARPRAVLALITYGVLHLADAAADRVVRHFYEDVIGPFWPPERKHVEDGYRALPFPFAALETPALDIEVRWRLADLIGYVETWSAVRAAETSVGRGPIERFRADLAAAWGEPDTIRDVRWPLSLRVGRVRDT
>CP029173.1|AWI87790.1|1166243_1168070_+|translational-GTPase-TypA
MKLRNIAIIAHVDHGKTTLVDKLLQQSGTFRENQRVEERAMDSNDLEKERGITILAKATSVVWQDTRVNIVDTPGHADFGGEVERILSMVDGVIVLVDAAEGPMPQTKFVVGKALKIGLRPIVAINKVDRPDARINEVVNEVFDLFAALDATDEQLDFPILYGSGRNGWMADSPDASPDVGLAPLFDLVLKHVPQARVEEGPFRMLGTLLEANPFLGRIITGRIASGTVKPNQSIKVLSRDGKVVETGRVSKILAFRGLERAPIDVGEAGDIVSIAGLLKGTVADTFCDPAVNEPIQAQPIDPPTVTMSFIVNDSPLAGTEGDKVTSRMIRDRLFKEAEGNVTLKIEEAADKDSFYVSGRGELQLSILIETMRREGFEIAVSRPRVVLEKDENGEVMEPVEEVVIDVDEEYSGVVVQKMSERKAEMIEMRPSGGNRLRLVFHAPTRGLIGYQGELMTDTRGTAIMNRLFKAYEPFKGEIAGRRNGVLISNDKGEAVAYAMWNLEDRGPMMIEPGAKVYQGMIVGEHNRENDLEVNVLKGKKLTNIRTTSKDEAVRLTPPIRMTLEKSLAWIQDDELMEVTPKSIRLRKIHLDPNDRKRFERSKEALTA
>CP029173.1|AWI87791.1|1168257_1169946_-|chemotaxis-protein
MRAVAHLPIVAKLGVVFALIILAVCGSTFISWRSLGTIEETNRWRDHTYQVLLELDRLTGSMVDRETGLRGYLVSADSAFLEPFHAGTKAYGETLGRLRNLVADNAEQLRRLDAVDAAAGQWTRDVAEREIGLMRDEATREQARRIEASGAGKTAMDTVRKVAAAMAGAEAALLETRAQVAREAASASRLAVGAGLAALLLVAGLGILLLNGFVARPIRRMTGLMSRLAEGDASVEIPFRERREEVGAMANAVQVFKDNLIRTRALEEETALARAGAEAQRKAAMREMADSFERAVSGIVGTVSAAATELQATAQSMEGTASQTASQSNAAAAEAEEAAANVGTVAAAAEELGASVQEIARQVTGSTALAQKAVVEAEGTAQLVQDLSVAAAKIGDVVGLISTIAGQTNLLALNATIEAARAGEAGRGFAVVAAEVKELANQTARATDEISGQIGQVQTITGQAVNAIGDIAARIREIDGLAGSIAAAVEEQGAATQEIVRNVSEASAGTGAVTGNVASVAAAAEETGAAASQVLTSASELSRQSEHLDGQVRHFLHTIRAA
>CP029173.1|AWI87792.1|1170320_1171007_+|septum-formation-inhibitor-MinC
MTSPAPTRPSLPLRGRVFRAVSLAPEAPLADWLALLDAALKRSATLFDDRAVILDVAGLKPAPSELETLIAELSARKLRILGIEGAEAPLPSLLPPRLVGGRPVGDAFEAPAFEEDKPGVSSLTIEGSVRSGQSIVHREGDVTVMGSVSSGAEILAGGSIHVYGALRGRAIAGAARNPRARIYCRKFEPELLGIDRLVRTAEDMGTHLRGQAVQIWSDGGAIKIAALG
>CP029173.1|AWI87793.1|1171019_1171835_+|septum-site-determining-protein-MinD
MAKVLCVTSGKGGVGKTTTTAALGAALAQAGEKVCVVDFDVGLRNLDLIMGAERRVVYDLINVTNGDAKLPQALIRDKRLENLSLLPASQTRDKDALTDEGVERVMGELREKFDWIVCDSPAGIERGAQLAMRHADVAVVVTNPEVSSVRDSDRIIGLLDSKTVRAERGDTIEKHLILTRFDPARADRGDMLKVDDVLEILSIPLLAIIPESLEVLRASNVGCPVTLNNPLCAPSRAYIDAVRRLKGETVPMAIPSDRKSLINKLFTRRAA

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Crispr_ID: CP029173_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029173_3

1702714-1702802

Orphan

Consensus_repeat	Method
GGTGGCCACCTTTCGGGACGATGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029173_3

>merge|CP029173|3|1702714-1702802|CRISPRCasFinder
GGTGGCCACCTTTCGGGACGATGCGCACGCTCCTTGTCTTTGCATCGTCTTGTTTCGAAAGCCGGTGACCACCTTTCGGGACGATGCGC

>CP029173|3|3|1702714-1702802|CRISPRCasFinder
GGTGGCCACCTTTCGGGACGATGCGC	ACGCTCCTTGTCTTTGCATCGTCTTGTTTCGAAAGCC
GGTGACCACCTTTCGGGACGATGCGC

Protein	Signature genes	Signature genes Name	Protein_function
CP029173.1\|AWI88197.1\|1700117_1700837_-\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI88209.1\|1711385_1711739_-\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI88202.1\|1705315_1705837_-\|cytochrome-c-maturation-protein-CcmE	unknown	unknown	gnl\|CDD\|237317
CP029173.1\|AWI88191.1\|1687709_1693016_+\|alpha-2-macroglobulin	unknown	unknown	gnl\|CDD\|225248
CP029173.1\|AWI88204.1\|1709203_1709440_+\|transcription-factor	unknown	unknown	gnl\|CDD\|377904
CP029173.1\|AWI91593.1\|1693071_1695135_+\|penicillin-binding-protein-1C	unknown	unknown	gnl\|CDD\|227289
CP029173.1\|AWI88196.1\|1699518_1700127_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
CP029173.1\|AWI88205.1\|1709439_1709838_+\|VapC-toxin-family-PIN-domain-ribonuclease	unknown	unknown	gnl\|CDD\|350219
CP029173.1\|AWI88206.1\|1709842_1710520_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|223816
CP029173.1\|AWI88193.1\|1695615_1696407_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
CP029173.1\|AWI88198.1\|1700901_1701915_-\|nickel-transporter	unknown	unknown	gnl\|CDD\|225125
CP029173.1\|AWI88203.1\|1707695_1709111_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340430
CP029173.1\|AWI88207.1\|1710569_1711124_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377032
CP029173.1\|AWI88194.1\|1696457_1697105_-\|class-GN-sortase	unknown	unknown	gnl\|CDD\|163496
CP029173.1\|AWI88192.1\|1695285_1695606_+\|quaternary-ammonium-compound-resistance-protein-SugE	unknown	unknown	gnl\|CDD\|171110
CP029173.1\|AWI88208.1\|1711137_1711365_-\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI88201.1\|1703256_1705257_-\|heme-lyase-NrfEFG-subunit-NrfE	unknown	unknown	gnl\|CDD\|224061
CP029173.1\|AWI91594.1\|1705997_1707548_-\|c-type-cytochrome-biogenesis-protein-CcmI	unknown	unknown	gnl\|CDD\|226687
CP029173.1\|AWI88195.1\|1697101_1699285_-\|marine-proteobacterial-sortase-target-protein	unknown	unknown	gnl\|CDD\|274782
CP029173.1\|AWI88199.1\|1701905_1702571_-\|DUF1007-domain-containing-protein	unknown	unknown	gnl\|CDD\|368801

Protein	Function_ID	Function_description	E-value
CP029173.1\|AWI88204.1\|1709203_1709440_+\|transcription-factor	gnl\|CDD\|377904	pfam07704, PSK_trans_fac, Rv0623-like transcription factor. This entry represents the Rv0623-like family of transcription factors associated with the PSK operon.	4.0626e-11
CP029173.1\|AWI88202.1\|1705315_1705837_-\|cytochrome-c-maturation-protein-CcmE	gnl\|CDD\|237317	PRK13254, PRK13254, cytochrome c maturation protein CcmE.	5.17415e-82
CP029173.1\|AWI88191.1\|1687709_1693016_+\|alpha-2-macroglobulin	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
CP029173.1\|AWI91593.1\|1693071_1695135_+\|penicillin-binding-protein-1C	gnl\|CDD\|227289	COG4953, PbpC, Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell envelope biogenesis, outer membrane].	0
CP029173.1\|AWI88195.1\|1697101_1699285_-\|marine-proteobacterial-sortase-target-protein	gnl\|CDD\|274782	TIGR03788, marine_srt_targ, marine proteobacterial sortase target protein. Members of this protein family are restricted to the Proteobacteria. Each contains a C-terminal sortase-recognition motif, transmembrane domain, and basic residues cluster at the the C-terminus, and is encoded adjacent to a sortase gene. This protein is frequently the only sortase target in its genome, which is as unusual its occurrence in Gram-negative rather than Gram-positive genomes. Many bacteria with this system are marine. In addition to the LPXTG signal, members carry a vault protein inter-alpha-trypsin inhibitor domain (pfam08487) and a von Willebrand factor type A domain (pfam00092).	0
CP029173.1\|AWI88205.1\|1709439_1709838_+\|VapC-toxin-family-PIN-domain-ribonuclease	gnl\|CDD\|350219	cd09871, PIN_MtVapC28-VapC30-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC28 and 30 and related proteins. This subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC28 and VapC30 toxins. M. tuberculosis VapC28 and VapC30 both cleave tRNA25Ser-TGA and tRNA28Ser-CGA. It belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is a PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.7635e-49
CP029173.1\|AWI88206.1\|1709842_1710520_-\|DNA-binding-response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.1224e-87
CP029173.1\|AWI88193.1\|1695615_1696407_-\|transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	1.3672e-06
CP029173.1\|AWI88198.1\|1700901_1701915_-\|nickel-transporter	gnl\|CDD\|225125	COG2215, COG2215, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.60597e-43
CP029173.1\|AWI88203.1\|1707695_1709111_-\|ATP-binding-protein	gnl\|CDD\|340430	cd16954, HATPase_PhoQ-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG. This family includes histidine kinase-like ATPase (HATPase) domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG. PhoQ is the histidine kinase (HK) of the PhoP-PhoQ two-component regulatory system (TCS), which responds to the levels of Mg2+ and Ca2+, controls virulence, mediates the adaptation to Mg2+-limiting environments, and regulates numerous cellular activities. Providencia stuartii AarG is a putative sensor kinase which controls the expression of the 2'-N-acetyltransferase and an intrinsic multiple antibiotic resistance (Mar) response in Providencia stuartii. The AarG product is similar to PhoQ in that it is able to restore wild-type levels of resistance to a Salmonella typhimurium phoQ mutant. However, the expression of the 2'-N-acetyltransferase gene and of aarP (a gene encoding a transcriptional activator of 2'-N-acetyltransferase) are not significantly affected by the levels of Mg2+ or Ca2+. Most proteins in this group contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some have an accessory HAMP sensor domain, and some have an intracellular membrane -interaction PhoQ sensor domain.	2.30621e-41
CP029173.1\|AWI88207.1\|1710569_1711124_-\|hypothetical-protein	gnl\|CDD\|377032	pfam03413, PepSY, Peptidase propeptide and YPEB domain. This region is likely to have an protease inhibitory function (personal obs:C Yeats). This model is likely to miss some members of this family as the separation from signal to noise is not clear. The name is derived from Peptidase & Bacillus subtilis YPEB.	0.00516198
CP029173.1\|AWI88194.1\|1696457_1697105_-\|class-GN-sortase	gnl\|CDD\|163496	TIGR03784, marine_sortase, sortase, marine proteobacterial type. Members of this protein family are sortase enzymes, cysteine transpeptidases involved in protein sorting activities. Members of this family tend to be found in proteobacteria, rather than in Gram-positive bacteria where sortases attach proteins to the Gram-positive cell wall or participate in pilin cross-linking. Many species with this sortase appear to contain a signal target sequence, a protein with a Vault protein inter-alpha-trypsin domain (pfam08487) and a von Willebrand factor type A domain (pfam00092), encoded by an adjacent gene. These sortases are designated subfamily 6 according to Comfort and Clubb (2004).	1.88853e-62
CP029173.1\|AWI88192.1\|1695285_1695606_+\|quaternary-ammonium-compound-resistance-protein-SugE	gnl\|CDD\|171110	PRK11431, PRK11431, quaternary ammonium compound efflux SMR transporter SugE.	2.47015e-30
CP029173.1\|AWI88201.1\|1703256_1705257_-\|heme-lyase-NrfEFG-subunit-NrfE	gnl\|CDD\|224061	COG1138, CcmF, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones].	0
CP029173.1\|AWI91594.1\|1705997_1707548_-\|c-type-cytochrome-biogenesis-protein-CcmI	gnl\|CDD\|226687	COG4235, COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones].	3.3402e-46
CP029173.1\|AWI88196.1\|1699518_1700127_+\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	1.04739e-20
CP029173.1\|AWI88199.1\|1701905_1702571_-\|DUF1007-domain-containing-protein	gnl\|CDD\|368801	pfam06226, DUF1007, Protein of unknown function (DUF1007). Family of conserved bacterial proteins with unknown function.	2.69333e-76

>CP029173.1|AWI88199.1|1701905_1702571_-|DUF1007-domain-containing-protein
MPIAALLRRLALTAALGLAAVAPALAHPHVWITAKAELAYEAGRVTGIRHAWTFDPEYTAFLTQGLDANGDGKLSPEELQGSAKEQAANLAEFAYFTKLKVAGKEQVFAEPQEARMAMEGGKLTLSFLLPLKTPVAQGRGVAAVEVYDPTYFIAFSLAEGADAVRLAGAAPGCSMTVTRAKNAEPAVASAGQSMTEAMFEALTTASNYGEQFANRAIVACP
>CP029173.1|AWI88198.1|1700901_1701915_-|nickel-transporter
MSLTAALRPGGATGSRWPLRLALAAAAVLAAAGLLAAIAAVLGPVAAPPPRSPFGIGFREAAPAATGLGGWLLAVQSNFSSHLRAAVTALKAGGPWTPLVVMGFAYGVFHAAGPGHGKAVIAGYIVAGERTLRRGFALSAAAALLQALVAIAIVGVGVFILKATASGMTRAGTLIETVSFALVAALGAAVTWRKAGRLAGLVTDTPAEACGPGCSHAHLTDAAALDRLGGWRERAGVVLAAGSRPCAGAVLILVFCAAQGMLAAGIAATFAMALGTALTTGALASLAVFAKALALRLAGGRGQTGAVAVGGLELLAGAFVLVLGVAMLSGLATGLGG
>CP029173.1|AWI88197.1|1700117_1700837_-|hypothetical-protein
MSDHALDAFAPILNWRLLKGSHSFPGPDGGTCINEAAMVAAGLPYRAITATEDCPPCFSRPLAAYALGLNDAMPEAERQGLMAFVLRLSGSADAPAIEAARTAFLALESARRILPPLLDAAGLPALAARCETASDAQSVMAALPAAEMQGGTLAHAAAGRHAWIAGARAAAAARTATAALRAFTDPRSAAEVAEGAAPFTEGTWRIALDILDGALGIGRQAPAIDLVSARDRLEAARQP
>CP029173.1|AWI88196.1|1699518_1700127_+|histidine-phosphatase-family-protein
MSRLSAPSTRIVCIRHGESTFNAHHEATGRDPGHIDARLSERGHAQVAAARKRLSDIPFELVVTSPLTRALQTTAGIFSDHPARPDVLVEVLHRECQESSCDIGRAASVLAQEFPAFRVDHLPETWWYADGEAGPEGWHVEPRTLFDRRVSGFRDWLRARPERTIAVVGHCTFFYHLTGRWLANCESLDVDLADEPLPRAYG
>CP029173.1|AWI88195.1|1697101_1699285_-|marine-proteobacterial-sortase-target-protein
MEAPMLPIPLSPHHPTPLARPAPGLTRNLLLGPLIALLLALVAGIAPARAGDGSGTLLLRSEGGAPVEAPRLRADAAITVSGPTARATITQAFRNTTAEWVEGTYLFPLPEDAAVDTMKLVVGDRVIVAEIREREAARRAYEAAKAEGKAAALTEQQRPNLFTNAVANIGPGETVLVQIEYQQPVRSSAGTYALRLPTVAAPRYNPVPTAVRSVAEGVPAADPVPDRDKIAAPVLDPARHTPVNPLMLTIDLKAGFPLGSVRSATHAIRVEELSEAERRITLADGATAADRDFELTWTAAPGEAPALGLFREQIAGGEAVLAVVTPPAAASPAAPVPRDVVFVIDNSGSMGGASMRQAKASLLIGLDRLRAGDRFNVIRFDDSFDTLFPDLVPADETHLDRAKGFVASLEASGGTEMLAPLRAALRDTAPGETGRLRQVVFLTDGAIGNEAQIFSAIAAERGRSRLFMVGIGSAPNGYLMSHAAELGQGSFTQIGTPDQVTERMRALLMKLENPAVTDLTATFSEPGVDATPARLPDLYRGEPLTLPARMKQARGTLTLAGRIGGEPWQAVLSLDAAQAGTGIGKLWARAKIAEAETARLTGRLSPDAADAAILRLALDHGLTTCLTSLVAVDATPRRPEGARLVSTELPLNLPAGWDFASLFGEGEAQPLAPPPRQRRASAPAPQLAAVQSVALPQTATDSEIRAWLGGLLLALGLGLFLRRRAAA
>CP029173.1|AWI88194.1|1696457_1697105_-|class-GN-sortase
MSGIAKRDAVVRRPGRLGLETSPAPWPASWSAPWPALLLVAAGLVLLAQAAWIPAKAALAQALLERAFARSLAEGMGQRPWPWADTVPVARIVFPGLNERYVALAGSSGQALAFGPGHVEGTPEAGEPGIAVYAAHRDTQFRSLGQLAAGDPIEVVRRDGQTVRFRVTGRRVVRWDASGLDPDAPGRRLVLATCWPLDAVTPGPERLLVEAVAEP
>CP029173.1|AWI88193.1|1695615_1696407_-|transcriptional-regulator
MPPIEADFPETELPDAQSRLIAAAVREALARRRMSRQALADAARISISTLEKALSGRRPFTLATTLRLEEALGLPLRVPAAAPPVASVDKARHAPEEFGSYTREAVAFLEGRYLTLRPSFGQAGAIFAYRTEIAWDADNARLVFREAERLDAPFAQSGIVSVPNQSGQIYLVTNFQGQYRLAVLGRPTIQGEMFGILTTLFSGRGTQLTPAATPLALVPERGALTDGAQYGRITAGMACEPAYRQILTRVREDVFAVFPGCEG
>CP029173.1|AWI88192.1|1695285_1695606_+|quaternary-ammonium-compound-resistance-protein-SugE
MPWIVLVVAGLLEVVWAFTMKQSEGFSRFWPSVVTVIAMVLSVVCLAWSMRSLPLGTAYTIWTGIGAVGAFIVGIAFLGEAMNATRILAAVLIVSGLVLMKLSSPA
>CP029173.1|AWI91593.1|1693071_1695135_+|penicillin-binding-protein-1C
MGAALAFSVALVALIAGALWRYAATLPPLDLTQAKLRSTVILDRKGQLLRPFATADGRWRLPVTADAIDPRYLAMLTAYEDRRFDSHPGIDPAATARAAWQWLAHRRIVSGGSTLSMQVARLVEPRAERSLAAKLRQMVRAVELERTLGKSGVLDLYLALAPYGGPVEGVRAASLAYFGREPARLSFAESALLVALPQSPEARRPDRFAANARRARDRVLDIAAARGVLTAAEAQAAKAEPVPSTRKHFPMLAAHAAEQAHAADPEARVQHLPLDARLQASLEALAAERAAATGPALSAAILALDNRTGAVLAHVGSAGYLDVARAGAVDATQAVRSPGSALKPFIYALAFENGLAHPETLLDDRPARFAASYAPENFDMGYRGTVTARLALQQSLNLPAVDLLDAVGAARFVARLRGAGATILLPRDTAPGLPVALGGLGITLTDLARLYAGLARGGSVPALARRLDGPPAAPEPERRVADPVAAWYVADILRGAPPPENALPGRISFKTGTSYGYRDAWAVGFDARATIAVWIGRPDGASVPGLVGRTHAAPILFDAFARLGGEPEPIPRPRDALIVATAALPPPLRHIRRDAPKTFAATLGVPLKIAYPPDGARVDLGLSEGAQARLALKALGGQPPLTWMVDGLPVAEAMRRQSEWSAEGAGFARISVMDAAGASDSVVVRLE
>CP029173.1|AWI88191.1|1687709_1693016_+|alpha-2-macroglobulin
MSQGKSLGRIGAALIGATLLGGSALAQAPAQAPPARSATAPVTKSFLREALASAGVRLETTLRSEAPPGAKTAAQWRREAEIAARSEGAEPDAELNAYAAAVAADPNDLRNWLDYARAANAAGNDEERSDYSARFKLKSRASAAAYQGYLRARNPADEARALARLGEIQAAQAEWRPALEAYRASLAIRDEAQTRAAYEKLREEHGFRILDYKVDSDAAAPRVCFTFSESLVPKTDYSPYIAVSGATNAAVTAEGSQVCVDGLKHSERYAFVVRQGLPSSVGENLLKSADYEVYVRDRSPQVRFTGRNYVLPRTGQAGVPLISVNANKLDVEVLRIGDRGLLPALRSEEFLSQLSGSTAKTIADQKGQRVWKGTLDTAKAETNREAVTAFPVLQAVGKLEPGLYLMLAKPTGTTDSSEDEYGGYETQATQWFVVSDLGLTAFKGRDGVHVFARSLASAKTVSGAEIRLVARNNDVLATAKTDGQGHAAFPAGLARGEGGLAPGLVVAQVGDDYGFLDLALGAFDLSDRGVKGRPAPGGAEAYVFPERGVYRSGETVQLTALLRDPQGAAVSGLPLTLVVKRPDGVEYRRAAVADEGLGGRSLALPLMAGAMHGTWRVAAYTDPKAPPVGEASWLVEDYVPERLEVNLTPKTPSLTRGEPAVIDVAARYLYGAPGSGLEVLGSVAVQAAANPGIKGLDGFSIGLDDEAVEATTAEIDAKATTDAQGRTSLTVPVQEVAAPRALEAKITLAVGEPGGRGLSRSVTLPILPAQPVLAIRKNFGGDLAENATATFDVVMAAPDGRRLAQDGVAWTLSKVERTYQWYRADGRWSFEPVKSSRRVADGRVATTADAPARIAVPVGFGQYRLEASVAGQPQAAASVSFTVGWGGSETADVPDLLDLTLDKPAYAAGERLRARLAPKFAGTATLAIVSDRVHEIRDVTVSEGGTSVDIPVKPEWGAGAYLVATAYRPLDQAAKRMPGRALGVAWFSVDKEKRGLSVSIEAPEKVRPRGTLTVPVKLAGLAPGEEARVTLAAVDVGILNLTRYEAPNPFAYFLGQKALGPEIRDLWGYLIDGMQGTLGAIRSGGDGGATELADAPPTQAPLALYSGVVTVGADGTAKIPLELPAFNGTARLMATAWTKAKVGQAQADVIVRDPVVLTGTLPRFLNVGDRSRFFVALDNVEGAAGDYTVDLDLTGPVVVAGEAVRSTMRLEAGAKGQLVIPITAAGPGTARLDLSLTGPGIQGSAGQSFALGINPGTGALVRRNVRPLEPGAGLDLTPDLLADILPGTGAVSVSANRLGGIDVAALLQSLDRYPYGCSEQIVSRAMPLLYVNALAAGEKLGLDGGLDERIRGAIERVLARQDSSGAFGAWSTENAGDTWLTAYATDFLTRARERGFAVPQTAFNSALDRLRNTVANTTNVENGGMDLAYAAYVLARNGRPVMGDLRYLADTKLADFATPLGRGQLAAALALLGDRGRAQKGFEAAVQALQAERDKGAYRADYGSRLRDGAALLALSGEAGFTQATLQPVAAVLGQERAEGRATSTQENAWMVLAAQSLAKESDSLSLTIDGKTETGPLSRLYRAPALEARPVQIVNAGREAVPIAIGIQGNPIAPEPAASHGFTVERGFYRLDGSPVDLSKPLRQNDRLVVVLKVTEAKASAGRLLLVDRLPAGLEIDNPKLLDADALSGLSFAKSDVAPAHTEFRDDRFVAAYDRTPEQSAFFSAAYTVRVVSPGTYVHPGASVEDMYRPERFGRTAFGSVEVMSAK
>CP029173.1|AWI88201.1|1703256_1705257_-|heme-lyase-NrfEFG-subunit-NrfE
MIVEIGHYALALALALSLVQAVMPAWAARSGDAALREVAGPAALSTFACILFAFCALTYAHVTSDFSVQNVVENSHTAKPLIYKISGVWGNHEGSMLLWVLILALFGAWVATAKNSVPPVLRTNTLMVQASVTFVFVLFIIMTSNPFARVAPAPLEGNDLNPLLQDLGLAIHPPLLYLGYVGFSVTFAFAVAALIEGRIDAVWARAVRPWALIAWSFLTLGIAMGSYWAYYELGWGGWWFWDPVENASLMPWIAGTALLHSIVVMEKRDALKVWTVLLAILTFSLSLVGTFIVRSGLLTSVHSFASDPSRGVFILAILALFIGGALSLFAWRAPSLRQGGLFAPISREGALVMNNLFLVAACATVFVGTLYPLLLEMLTGEKISVGPPFFNWTFIPLALPLLVIVPFGQALAWKRGDAAAAAQRLLAAFAVALVVGLAAAAWTWGGPVMAPVGLGFGAYLIIGSALEIWARARGYGQNRTHDLGTTWRRAIGLPRSAWGTALAHAGVGVVVLGIAGQGWATEGLATIRPGGQVASGPYVATLDRVGPTKGANYEETTAFLTLRNRAGDYVGTTETGKRFYPSRRMTVTESGLKTVGLSQIYASLGEVMPDGSIGMRLYYKPLVLLIWIGSLIMAAGGGLSLTDRRMRVGAPVKARAKLPPSAVPAE
>CP029173.1|AWI88202.1|1705315_1705837_-|cytochrome-c-maturation-protein-CcmE
MTRKSRRLILIAACGAVLALALGLILSAMSGSIVFFRSPAEVAAQGVAPGTRFRLGGLVTEGSVKRGPDQNVEFSVTDTNATVPVQYRGLLPDLFREGQGIVAEGKLDAGGVFRADTVLAKHDENYMPREVADALKAQGRWQEGGGKESPKDATKDAAKPASADAALGQRSER
>CP029173.1|AWI91594.1|1705997_1707548_-|c-type-cytochrome-biogenesis-protein-CcmI
MTAIWFILAAMTGAAVFALLWPMSRRRRHGAAPEAEGSDGLATETGFYEDQLAEIERDLGRGLIAPAEAEAARAEAARRLLRASREERAEASGAAPIAEPHLRQRRAASAFALSTIPLVALVVYGLYGSPNLPSQTDADRKATRAGAQDLMTAIGQIEARLANHPDDARGWSVLGPVYMRLGRFDDAARAYAALARLKGEDAQALSDWGEALVAAADGTVSPEARKVLGRALAADPKAAKPQFYLARGDEQSGDVAGAVRRLEAMAASAPADAPWLPTVRDNLARLKGETTAAPKADGSGEGAKDGPMSEAPVAGPGSNIQALPPSERIDAIRGMVEGLERRLAKQGGSADEWLRLVRSHAVLGERDKALDALERARKAFRDDPEALARLDTQAHELGLPGAGAPPKPEAGEKTGDRSGEKAAEPDAAAAAIKAMPPAEREAAIRGMVASLDRRLAAKGGSADEWMRLVRSYGVLGDRAAAAQALDRAKMALAVNPTAVERLDALGKELGLNPAQP
>CP029173.1|AWI88203.1|1707695_1709111_-|ATP-binding-protein
MTDRLAWLPLRRRSIAVRLAVSSFLSSTAILVIAAFILTTLYRENTERAFDSRLLVFANNLATDLVSPSEPETRSFSLGDPRFDLPLSGWYWQVGRADAKPRDLRTSRSLVGVPLKGPDQAGTATIGQIRQGYGRGQDDRMLRIVERDVDVGADGRYTVRVAGPADEIVNDVERFRFSLFMTFGLLGFSLAATALLQIRFGLAPLRKLRTALGSIRRGEADRIDGEYPRDIAPLAGEINLLIETNREILERARTQVGNLAHALKTPLSIIVNEAGGSDAPPELSEKIREQAAVMRDQVNYHLDRARAAALAGTLGTSTEVEPALAGLVRTFGKIYRDKDIAYEVHVPPGLRFRGEKQDFEEMIGNLVDNASKWATGRVSISAAPTGEHDYPHLLVAVEDDGPGLPEEDRAAVLKRGRRLDETKPGSGLGLSIVADLAALYRGRFRLEAAALGGLRAVIEVPGDAPAGAGQR
>CP029173.1|AWI88204.1|1709203_1709440_+|transcription-factor
MALHIRDAETDRLVRLLAERKGIPLTEAIKVAVRNELEREAQRPALWERLKPLHERVAARPSTGLEADKAFFNALNDE
>CP029173.1|AWI88205.1|1709439_1709838_+|VapC-toxin-family-PIN-domain-ribonuclease
MFVDASALIAIVTEEPEGRALTGRLERTGDAITSPIVVYEATLGIARKKQGGLKAARADIEMLLDLARIRLVPITTDDAGRALDAFARYGKGTGHPARLNMGDCFAYAVARNHGVPLLYKGEDFALTDLSGQ
>CP029173.1|AWI88206.1|1709842_1710520_-|DNA-binding-response-regulator
MRLLVVEDDRDINRQVVAALEEAGYVADKAFDGEEGGYLGENEPYDAIILDMGLPKADGVTVLQNWRRAGVKTPVIILTARDRWSDKVDGFDAGADDYVTKPFHMEELMARVRAILRRAAGHASSQISCGPVTLDTRSGRVFVDGAPIKLTSHEYRLLSYLMHHTGRVVSRAELTEHLYDQDFDRDSNTIEVFVGRLRKKLAVDLIQTVRGLGYLIDPNQPPGRG
>CP029173.1|AWI88207.1|1710569_1711124_-|hypothetical-protein
MCRALPTGNPRDRFRLVLGNIADPDMALDRKTDFTPPAPSRASALANIQDAFSALARQSPPMRQALALLIVVSTAAVLAAGAVGPLAEETGALSPAPARQEPLNRGDDCLSPADLREAVAEKRVVPPIAAIRAARQIIPRAEIQRASLCRHEAGLVYLLTALRRDGQFMHVMVDAQSGQVSGQW
>CP029173.1|AWI88208.1|1711137_1711365_-|hypothetical-protein
MSAPASAAGPARPAWRSSRRSRSRAAVGRLAAARHGFERSLIALRRAALDAVDSGDLAILALRVCGERGLRAGAE
>CP029173.1|AWI88209.1|1711385_1711739_-|hypothetical-protein
MDKIAAEAARLLFADGGAGWIVAVLLGVACLHLYRDGLRVLEARIAETGATAAALERASQTNAAVAAALESRTRVLEDLVRLTGETAGAVARSDERARERFEDLLRRIGELQHRPSL

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Crispr_ID: CP029173_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029173_5

2381005-2381091

Orphan

Consensus_repeat	Method
ATAGAGCATCGTCCCGAAAGGTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029173_5

>merge|CP029173|5|2381005-2381091|CRISPRCasFinder
ATAGAGCATCGTCCCGAAAGGTGGGTCCCGGCTTTCGGACAACGACGATGCGAAAGCAGGAGGAGAGAGCATCGTCCCGAAAGGTGG

>CP029173|5|5|2381005-2381091|CRISPRCasFinder
ATAGAGCATCGTCCCGAAAGGTGG	GTCCCGGCTTTCGGACAACGACGATGCGAAAGCAGGAGG
AGAGAGCATCGTCCCGAAAGGTGG

Protein	Signature genes	Signature genes Name	Protein_function
CP029173.1\|AWI88799.1\|2383096_2383435_-\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI88795.1\|2378725_2379469_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293826
CP029173.1\|AWI88801.1\|2385320_2385989_+\|guanylate-kinase	unknown	unknown	gnl\|CDD\|234719
CP029173.1\|AWI88802.1\|2386029_2387778_-\|multidrug-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
CP029173.1\|AWI88803.1\|2387876_2389184_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341038
CP029173.1\|AWI88792.1\|2375767_2377156_+\|5-aminolevulinate-synthase	unknown	unknown	gnl\|CDD\|236370
CP029173.1\|AWI88789.1\|2373023_2373401_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|184038
CP029173.1\|AWI88793.1\|2377623_2378178_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378261
CP029173.1\|AWI91647.1\|2384422_2385286_+\|YicC-family-protein	unknown	unknown	gnl\|CDD\|236993
CP029173.1\|AWI88797.1\|2381269_2382652_+\|3-deoxy-7-phosphoheptulonate-synthase-class-II	unknown	unknown	gnl\|CDD\|366662
CP029173.1\|AWI88788.1\|2372310_2372766_-\|DUF2948-domain-containing-protein	unknown	unknown	gnl\|CDD\|371401
CP029173.1\|AWI88790.1\|2373497_2374787_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|236486
CP029173.1\|AWI88805.1\|2390662_2391481_-\|response-regulator	unknown	unknown	gnl\|CDD\|381085
CP029173.1\|AWI88791.1\|2374980_2375307_-\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI88787.1\|2370983_2372279_-\|histidinol-dehydrogenase	unknown	unknown	gnl\|CDD\|234853
CP029173.1\|AWI88804.1\|2389395_2390586_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370815
CP029173.1\|AWI88800.1\|2383516_2384062_-\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI88794.1\|2378395_2378698_+\|PhnA-protein	unknown	unknown	gnl\|CDD\|225380
CP029173.1\|AWI88786.1\|2370334_2370847_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235077
CP029173.1\|AWI88798.1\|2382874_2383087_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP029173.1\|AWI88795.1\|2378725_2379469_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293826	cd07740, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	7.45479e-100
CP029173.1\|AWI88801.1\|2385320_2385989_+\|guanylate-kinase	gnl\|CDD\|234719	PRK00300, gmk, guanylate kinase; Provisional.	4.0621e-111
CP029173.1\|AWI88802.1\|2386029_2387778_-\|multidrug-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
CP029173.1\|AWI88803.1\|2387876_2389184_-\|MFS-transporter	gnl\|CDD\|341038	cd17485, MFS_MFSD3, Major facilitator superfamily domain containing 3 protein. Major facilitator superfamily domain containing 3 protein (MFSD3) is a predicted acetyl-CoA transporter. As an atypical putative membrane-bound solute carrier (SLC), MFSD3 is most likely to be functionally active in the plasma membrane and not in any intracellular organelles. MFSD3 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.99998e-51
CP029173.1\|AWI88792.1\|2375767_2377156_+\|5-aminolevulinate-synthase	gnl\|CDD\|236370	PRK09064, PRK09064, 5-aminolevulinate synthase; Validated.	0
CP029173.1\|AWI88789.1\|2373023_2373401_+\|hypothetical-protein	gnl\|CDD\|184038	PRK13410, PRK13410, molecular chaperone DnaK; Provisional.	0.000962729
CP029173.1\|AWI91647.1\|2384422_2385286_+\|YicC-family-protein	gnl\|CDD\|236993	PRK11820, PRK11820, YicC family protein.	2.46581e-100
CP029173.1\|AWI88797.1\|2381269_2382652_+\|3-deoxy-7-phosphoheptulonate-synthase-class-II	gnl\|CDD\|366662	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family. Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway.	0
CP029173.1\|AWI88788.1\|2372310_2372766_-\|DUF2948-domain-containing-protein	gnl\|CDD\|371401	pfam11164, DUF2948, Protein of unknown function (DUF2948). This family of proteins with unknown function appear to be restricted to Proteobacteria.	4.55528e-62
CP029173.1\|AWI88790.1\|2373497_2374787_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl\|CDD\|236486	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated.	0
CP029173.1\|AWI88787.1\|2370983_2372279_-\|histidinol-dehydrogenase	gnl\|CDD\|234853	PRK00877, hisD, bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed.	0
CP029173.1\|AWI88804.1\|2389395_2390586_-\|hypothetical-protein	gnl\|CDD\|370815	pfam10098, DUF2336, Uncharacterized protein conserved in bacteria (DUF2336). Members of this family of hypothetical bacterial proteins have no known function.	1.73133e-25
CP029173.1\|AWI88793.1\|2377623_2378178_-\|hypothetical-protein	gnl\|CDD\|378261	pfam09832, DUF2059, Uncharacterized protein conserved in bacteria (DUF2059). This domain, found in various prokaryotic proteins, has no known function.	7.60734e-10
CP029173.1\|AWI88794.1\|2378395_2378698_+\|PhnA-protein	gnl\|CDD\|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	1.92207e-38
CP029173.1\|AWI88786.1\|2370334_2370847_-\|hypothetical-protein	gnl\|CDD\|235077	PRK02853, PRK02853, hypothetical protein; Provisional.	1.11267e-102
CP029173.1\|AWI88805.1\|2390662_2391481_-\|response-regulator	gnl\|CDD\|381085	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs). Two-component systems (TCSs) involving a sensor and a response regulator are used by bacteria to adapt to changing environments. Processes regulated by two-component systems in bacteria include sporulation, pathogenicity, virulence, chemotaxis, and membrane transport. Response regulators (RRs) share the common phosphoacceptor REC domain and different effector/output domains such as DNA, RNA, ligand-binding, protein-binding, or enzymatic domains. Response regulators regulate transcription, post-transcription or post-translation, or have functions such as methylesterases, adenylate or diguanylate cyclase, c-di-GMP-specific phosphodiesterases, histidine kinases, serine/threonine protein kinases, and protein phosphatases, depending on their output domains. The function of some output domains are still unknown. TCSs are found in all three domains of life - bacteria, archaea, and eukaryotes, however, the presence and abundance of particular RRs vary between the lineages. Archaea encode very few RRs with DNA-binding output domains; most are stand-alone REC domains. Among eukaryotes, TCSs are found primarily in protozoa, fungi, algae, and green plants. REC domains function as phosphorylation-mediated switches within RRs, but some also transfer phosphoryl groups in multistep phosphorelays.	4.14006e-13

>CP029173.1|AWI88795.1|2378725_2379469_-|MBL-fold-metallo-hydrolase
MRLQVLGCGDAFGSGGRFNTCFHVDASDAPDTGAFLIDCGASTLIAIRRFGVEPNRIRTVFLTHLHGDHFGGLPWLILDGQLVSGRTDPLTVVGPPGTAARLPAAMEVLFPGSSTAERRFSVEVVEMEAGRPVETGGVRATAFTMRHPSGAPAHALRIEAAGKVVSYTGDTEWVDEIVVVGRGSDLMIAEGYTVERPVKFHLDWATLKRRLPEIGPKRLMLTHMSPEMIAHPPDGYIAAEDGLVVTL
>CP029173.1|AWI88794.1|2378395_2378698_+|PhnA-protein
MPNTDDTYIYDEALGEWRPAGAAAAETPARAPVRDAAGNILADGDAVTLIKDLKVKGANQTLKQGTVIRPIRLTDDPEEIDCRHDSIKGLVLRTEFVRKR
>CP029173.1|AWI88793.1|2377623_2378178_-|hypothetical-protein
MRQEMLSGLLGLGLLCAPALVTGAVPALAQAPAKPAAPTVTADPERLAAAREVVAAAQGDRAAVLAAMKAPMTGVMQQMGVTDPKKAQVMVDEVVLPTLSEHYDDLLAVQALSFAAVLSKEDLKAVAAFYATPAGKNLVKAQPQLSQAMLTGMQQWMGTLMPQLKEKVEKAAAAHGWSNEIKRR
>CP029173.1|AWI88792.1|2375767_2377156_+|5-aminolevulinate-synthase
MPVNLMPVNAADSATLPDESIVGGDGGVDETGASNGRARFERPPVRPAGPRTDYDGHFRAALDRLHSERRYRVFADIERISGRFPQATWRRPEGGNREITVWCSNDYLGMGQHPEVVGALTQTAARCGVGAGGTRNIAGNNSPLVDLERELADLHGKEAGLVFTSGYVSNQAGISTIAKLIPNCLILSDAFNHNSMIEGVRHSGCEKRVFRHNDLEHLEQLLAEAGDRPKLIAFESVYSMDGDVAPIAAICDLADAYGAMTYLDEVHAVGLYGERGAGIAERDGVMHRVDVIEGTLAKGFGCVGGYITGSTTLCDAVRSHAAGFIFTTALPPAVAAAARASVRYLKRSKLEREAHQRQAARTKAALETAGLPVLRTETHIVPLMVGDAELCKAAADHLLDRHGIYIQPINYPTVPRGTERLRITPSPFHDDERIGALTAALVETWDTLDLPRAGTVFAAAAE
>CP029173.1|AWI88791.1|2374980_2375307_-|hypothetical-protein
MGRGANHGSANHGSAWQAGAAMGSEPVLAKVVKPRYGLSATAGFSGSIVSEREMATKDEERAARLKAALRDNLRRRKAQARGRVDDAPDTAPAPDSEPATNERSAGKD
>CP029173.1|AWI88790.1|2373497_2374787_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MDRIHITGGTPLNGTIPISGAKNAALPLMIASLLTGETLELINVPRLADIAALTRILGNHGVDHMVVGKRPGQTAETGQTVRLTASNVIDTTAPYELVSTMRASFWVIAPLLARFGEAKVSLPGGCAIGTRPVDLLLMALEKLGAEIEIDGGYVVARTKNGLRGAEIDFPKVTVGGTHVALMAAALAYGTTVIDNAAREPEVVDLAECLSKMGARIEGAGTSRIVVEGVARLGGARHEVLPDRIETGTYAMAVAMTGGDVSLVNTRADLLSSALDTLAATGAEVTSLPDGIRVRRNGGGINPADITTDPFPGFPTDLQAQFMALMTLAKGQSRIRETIFENRFMHVQELARLGARIRLDGDLAVVEGVERLKGAPVMATDLRASVSLVIGALAAEGETQINRVYHLDRGFEALEAKLGRCGAQIERVRA
>CP029173.1|AWI88789.1|2373023_2373401_+|hypothetical-protein
MKSGVLAMGRTLGVVLALGFVASPASAQYYRDGYDSPRRDDGYSRRYRDDDGYGQRRYGEDYGRRRRYDDEDDGPRFRGPPRGGRGGGSICVTARGSCPTAFAPPNAPCACDIPGFGIKRGAVGR
>CP029173.1|AWI88788.1|2372310_2372766_-|DUF2948-domain-containing-protein
MELLKLAALDVEDLAVISAHLQDAILRAEDLAWLPGEHRFALAARRFDWSVPPGEPPRRRLAGLHFERVLSVKARGITPGATSGETLSLLAITFEETEAPSGFATLVFSGGAAIRLELECIEVRLKDLGPVWQADGRPDHEAARSLVEYRP
>CP029173.1|AWI88787.1|2370983_2372279_-|histidinol-dehydrogenase
MIRLDSRDPDFGASFKRLLGLKREISEDVDETVRGIIAGVVSGGDAALVDYTRRFDRLGQDFSAAALRITPEEVEAAVAACPPEARAALTLAAERIEAYHRRQVPEDHLSTDDLGVTAGWRWTALESVGLYVPGGTASYPSSVLMNAVPARVAGVPRIVMVVPTPEGQLNPLVLAAAQLSGITEIYRVGGAQAVAALAYGTESISPVAKIVGPGNAWVAAAKRRVFGQVGIDMIAGPSEVLILADGHANPDWIAADLLAQAEHDEAAQSVLITDSDALAEAAEAAVERALTTLPREKIARASWRDYGAIIRVRDFDEAVPLVDAIAPEHLEIETQDADALALKIRNAGAIFLGSHTPEAIGDYVGGPNHVLPTARSARFSSGLGVLDFMKRTSILRCDPAALRALGPAAIALGESEGLDGHARSVAIRLNL
>CP029173.1|AWI88786.1|2370334_2370847_-|hypothetical-protein
MKAEPKQGEDGAPEKPRNRLASVRFDEASIGRGNPDQEHERAIAIYDILEDNAFTLPDRDEGPYALVLGLVENKLSFAITTEAGEPVMTHLLSLTPFRRVIRDYEMICESYYSAIRTASPTQIEAIDMGRRGLHNEASELLRQRLEGKVDLDHDTARRLFTLIFALHWKG
>CP029173.1|AWI88797.1|2381269_2382652_+|3-deoxy-7-phosphoheptulonate-synthase-class-II
MAERWTPKTWRNLPIQQVPSYPDAGALQAVEAQLASFPPLVFAGEARKLKAALARVGAGEAFLLQGGDCAESFDEHSADNIRDFFRVFLQMAMVLTFAGGSPVVKVGRIAGQFAKPRSSPTETLDGVSLPSYRGDIINGLTFNEDARIPDPKRQLEAYRQSAATLNLLRAFATGGYANLENAHRWMLGFVKDSPQSSRYRDVAERMSDALDFMRAIGINPETHQEVRTTDFYTSHEALLLGYEESLTRVDSTSGDWYATSGHMLWIGDRTRQPDHAHVEYARGIKNPIGLKCGPSTTAEGLIRLIDLLNPENEAGRLSLICRFGADKVGDHLPGLIRTVQREGRNVVWVCDPMHGNTVAAGRYKTRPFERVMQEIEGFFGVHRAEGTIAGGIHLEMTGKDVTECTGGARALTADDLQDRYHTYCDPRLNAEQALEVAFLTAELVKRERAEIERPRLDAAE
>CP029173.1|AWI88798.1|2382874_2383087_+|hypothetical-protein
MAVSATRKRSRIRSLWPGWNPGVPSTVLSPLERRPVEMHPIESETRPPRSFTANELIAMARAARARRLDP
>CP029173.1|AWI88799.1|2383096_2383435_-|hypothetical-protein
MDAIDGGECDEDWDQDLADDLIGSTLLVGLTYVDPEGALLGRRQVFGIVETVDARTGIVIRTGDEGEPFTVAPLLDAIEVGEPGLYQLADQDRVVENPDFTALFTVTESRRN
>CP029173.1|AWI88800.1|2383516_2384062_-|hypothetical-protein
MTNPFDIKNRFRARLRAADAQKHRIRAKLLQDGTRALAPITEALHLMAEVLEEDGIEHGRIDCPVPEVDRDDFVGFTATLHNGADQEHRITVKYGPVLGGRNFIAVTGLGAEYNERLLTLASNAAPTLGRSVGNDVHVEADRGGDLAEILREMVEDFFAGHSEPPIRTGTSEARGRLALVQ
>CP029173.1|AWI91647.1|2384422_2385286_+|YicC-family-protein
MTGFARSAGTTGAVQWLWEIRTVNGRGLDIRVRVPNGFDAAGEAARAALSKALARGQCQLNLTLTRPEAAARVRIDESLLASLAAAVARVPRPAGVGPATLDGLLSVRGVVETESEAGADPEALNRELAAGIDSLVADLVTARRAEGARLHAILSEQIADIARLTQAAQDCPARRPEAVRARLAESVAALVGAGGLDPDRLHQEAVLLAAKADVREELDRLRAHLDAVGELLIEGGAIGRRLDFLAQELGREANTLCAKAGDITLSRIGLDLKAVVEQFREQVQNVE
>CP029173.1|AWI88801.1|2385320_2385989_+|guanylate-kinase
MTQDATQGRPDIARRGLILILSSPSGAGKTTLTRAIAQDGGWGLDLSISVTTRARRPSEIDGRHYRFIDREAFEDLRTRDDLLEWAEVHGNFYGTPRRPVERTLAQGRDMIFDIDYQGTRQVRQRLQDDVVTVFILPPSFSELRNRLERRAEDSPETIERRLANARNEMQRWSEYDYVIVNDDLDESFRALQAILTAERLKRTRRTGLPGFVDGLLAEAERG
>CP029173.1|AWI88802.1|2386029_2387778_-|multidrug-ABC-transporter-ATP-binding-protein
MLKAFLAYYRPHRTLFLVDFGCAVLSGLLELGFPLAVKAFVDRLLPQQDWSLILLAAAGLTLLYVANAGLMVVVTYWGHLLGINIETEMRARAFEHLQKLSFRFFDGQKTGHLVARVTKDLEEIGEVAHHGPEDVFIAVMTLVGAFVLMFLVHPPLALMTLAILPLIAFVVIRYGGRMTRNWQAQYGRVGAFNARIEENVGGIRVVKAFANEAHERALFASDNLKYRTTKLEAYRLMAGALSINYLGLRLVQIVVLLGGAAFVVRGDLSAGGFVGFLLLVGVFYRPLEKIGAVIETYPKGIAGFRRYQELLATEPDIADRPGAIPAPPLRGEIRFESVRFGYSPDRPVLDGVDLTIRAGETVAFVGPSGAGKTTLLSLIPRFYEAEAGRITIDGHDIRDLTLASLRGQIGIVQQDVFLFAGTIRENIAYGRLDASEAEILDAAARARLDRLIASLPEGLDTVIGERGVKLSGGQKQRLAIARAFLKNPPILILDEATSALDTETEREIQASLSELAEGRTTLVIAHRLATIRHADRIVVVAENGIAEQGRHDALLARDGYYRRLHAAQVEDSLSDRPRTAAE
>CP029173.1|AWI88803.1|2387876_2389184_-|MFS-transporter
MNGYEPTPHAAPVSDRNEPGWAAQLAPFFGLYVTFGTTLGFLVSGAPLILRARGIDLAEVGVLQLINLPVGLTFLWAMLVDRIRLPGLPHRLGWIVLMQGAAIALLIVLSRGEAWPLPALFGLALATCFCVATMDIALEALVVETVGPERRPYVASAKLCGASLGGLFGAGVLIAEYDRLGWQNAVLAVAILNGLCLLPMLRYPERALRRPSAESPRSAPKHRREGWRPAFGKRRGQNGELGRLRLLGGRVLVLGLYFAAMFALTGSNNLALLDLGVPLGEVGLVTGGLASGINLVMALVSGYLVRRFGTLPLITVSALGVAASGGLMLWASATAAPNLGLAAAILGILCGGGLGVPVFNMIYRWAQGPQPATDYALLFGAAFFAAMPLRVGAPALAGAVGWPAYFALAVPLYALAVLLLRGAIARTLAGDRAPS
>CP029173.1|AWI88804.1|2389395_2390586_-|hypothetical-protein
MHDQTPGDRPGPQHPYSRARLNDLVRRIEEALRSGDTALQSKLVLQSAELLTKRWSRLPPPDKPAFDALLVTLCSQIDTAARRAFAERLAPLRLGPPRTAQALARDASVAVAEPVLAGCSCLGGDLLAEVATSGGAGHRRAIASRPSLPPPLTDRLVRHGDGRVAVRLLDNPGARFSESGFAGLIAHSERAEAVTLRLALRPDLPPLHRPTLLKLTRQRATEALEADLGGDGAARLLVQATETLARPVAEDRVARFRASLDVIGSRFTGPHRGPNASQLERWITLNRIEDELAAIAHAAGLPLAMTVAAFDAPAPAPLAAILRGLDHPWPVLKALLVRRFGETLSPAMADEIWTLHRRLRPGTARRLIRCAAMPMGCAAFLDEAEADDGASNGAGP
>CP029173.1|AWI88805.1|2390662_2391481_-|response-regulator
MNASPTLLIADPDEETRLALAEAVGRLDPGARIVEVADGSALNRALAGSRIDLLFVDVLLPQTNSADIRRWREAGNPRGLVVLVTDMLAPRWPATARRVGAYDVILKPLGDLHIGRLLAAHRILSRSLDCLVVDPGQATRTLVRKLLGQSHFSFRIREAAGGREAIRLAEGDPIDLAIIEMSLPDYPALEVACRINDRHPEARILMTGPRIEEGVQRQLATFGASGFLPKPFQFFDIDKAVHESFGLWHPYLINALRREHRLDVEAAVGQAV

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Crispr_ID: CP029173_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029173_6

2509513-2509607

Orphan

Consensus_repeat	Method
GGCCGCCGGCTTTCGGAAAAAGACGATGCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029173_6

>merge|CP029173|6|2509513-2509607|CRISPRCasFinder
GGCCGCCGGCTTTCGGAAAAAGACGATGCACAAACAAGAGGATAGAGCATCGTCCCGAAAGACGGCCGCCGGCTTTCGCGAAAAAGACGATGCAC

>CP029173|6|6|2509513-2509607|CRISPRCasFinder
GGCCGCCGGCTTTCGGAAAAAGACGATGCAC	AAACAAGAGGATAGAGCATCGTCCCGAAAGACG
GCCGCCGGCTTTCGCGAAAAAGACGATGCAC

Protein	Signature genes	Signature genes Name	Protein_function
CP029173.1\|AWI88900.1\|2510455_2511316_-\|serine-O-acetyltransferase	unknown	unknown	gnl\|CDD\|182987
CP029173.1\|AWI91656.1\|2517424_2518180_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|181883
CP029173.1\|AWI91655.1\|2511575_2512475_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|236167
CP029173.1\|AWI88888.1\|2493708_2495205_+\|ammonia-channel-protein	unknown	unknown	gnl\|CDD\|223083
CP029173.1\|AWI88905.1\|2518574_2520401_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|378737
CP029173.1\|AWI88893.1\|2504272_2504575_-\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI88890.1\|2497012_2499625_+\|cell-division-protein-FtsK	unknown	unknown	gnl\|CDD\|224588
CP029173.1\|AWI88898.1\|2509617_2509947_-\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI88897.1\|2508856_2509489_+\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|225484
CP029173.1\|AWI88901.1\|2512766_2514386_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173858
CP029173.1\|AWI88899.1\|2510100_2510316_-\|DUF3126-domain-containing-protein	unknown	unknown	gnl\|CDD\|371468
CP029173.1\|AWI88903.1\|2516795_2516999_-\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI88896.1\|2508292_2508643_-\|DUF952-domain-containing-protein	unknown	unknown	gnl\|CDD\|226033
CP029173.1\|AWI88891.1\|2499771_2501907_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
CP029173.1\|AWI88895.1\|2507219_2508296_-\|dihydroorotate-dehydrogenase-(quinone)	unknown	unknown	gnl\|CDD\|235388
CP029173.1\|AWI88894.1\|2504571_2506890_-\|CbbBc-protein	unknown	unknown	gnl\|CDD\|273765
CP029173.1\|AWI88904.1\|2517010_2517268_-\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI88902.1\|2514382_2516674_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP029173.1\|AWI88889.1\|2495546_2496803_+\|porin	unknown	unknown	gnl\|CDD\|369446
CP029173.1\|AWI88892.1\|2502285_2504253_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|226434

Protein	Function_ID	Function_description	E-value
CP029173.1\|AWI88900.1\|2510455_2511316_-\|serine-O-acetyltransferase	gnl\|CDD\|182987	PRK11132, cysE, serine acetyltransferase; Provisional.	1.84176e-122
CP029173.1\|AWI91656.1\|2517424_2518180_-\|DNA-binding-response-regulator	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	8.06599e-77
CP029173.1\|AWI91655.1\|2511575_2512475_-\|transcriptional-regulator	gnl\|CDD\|236167	PRK08154, PRK08154, anaerobic benzoate catabolism transcriptional regulator; Reviewed.	2.64473e-143
CP029173.1\|AWI88888.1\|2493708_2495205_+\|ammonia-channel-protein	gnl\|CDD\|223083	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism].	2.24603e-163
CP029173.1\|AWI88905.1\|2518574_2520401_+\|histidine-kinase	gnl\|CDD\|378737	pfam11849, DUF3369, Domain of unknown function (DUF3369). This domain is functionally uncharacterized. This domain is found in bacteria. This presumed domain is about 170 amino acids in length. The domain appears to be related to the GAF domain.	4.82073e-55
CP029173.1\|AWI88890.1\|2497012_2499625_+\|cell-division-protein-FtsK	gnl\|CDD\|224588	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning].	0
CP029173.1\|AWI88897.1\|2508856_2509489_+\|DNA-binding-protein	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	7.41497e-54
CP029173.1\|AWI88901.1\|2512766_2514386_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173858	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold. This family represents the substrate-binding domain of an ATP-binding cassette (ABC)-type dipeptide import system. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
CP029173.1\|AWI88899.1\|2510100_2510316_-\|DUF3126-domain-containing-protein	gnl\|CDD\|371468	pfam11324, DUF3126, Protein of unknown function (DUF3126). This family of proteins with unknown function appear to be restricted to Alphaproteobacteria.	3.54744e-24
CP029173.1\|AWI88896.1\|2508292_2508643_-\|DUF952-domain-containing-protein	gnl\|CDD\|226033	COG3502, COG3502, Uncharacterized protein conserved in bacteria [Function unknown].	1.22663e-51
CP029173.1\|AWI88891.1\|2499771_2501907_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	1.68686e-32
CP029173.1\|AWI88895.1\|2507219_2508296_-\|dihydroorotate-dehydrogenase-(quinone)	gnl\|CDD\|235388	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase.	1.6168e-171
CP029173.1\|AWI88894.1\|2504571_2506890_-\|CbbBc-protein	gnl\|CDD\|273765	TIGR01701, Hypothetical_protein_Rv2900c/MT2968/Mb2924c., oxidoreductase alpha (molybdopterin) subunit. This model represents a well-defined clade of oxidoreductase alpha subunits most closely related to a group of formate dehydrogenases including the E. coli FdhH protein (TIGR01591). These alpha subunits contain a molybdopterin cofactor and generally associate with two other subunits which contain iron-sulfur clusters and cytochromes. The particular subunits with which this enzyme interacts and the substrate which is reduced is unknown at this time. In Ralstonia, the gene is associated with the cbb operon, but is not essential for CO2 fixation.	0
CP029173.1\|AWI88902.1\|2514382_2516674_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.18006e-35
CP029173.1\|AWI88889.1\|2495546_2496803_+\|porin	gnl\|CDD\|369446	pfam07642, BBP2, Putative beta-barrel porin-2, OmpL-like. bbp2. BBP2 is a family of putative porin proteins that are likely to be outer membrane beta barrel proteins porins.	3.22754e-53
CP029173.1\|AWI88892.1\|2502285_2504253_+\|histidine-kinase	gnl\|CDD\|226434	COG3920, COG3920, Signal transduction histidine kinase [Signal transduction mechanisms].	8.67692e-33

>CP029173.1|AWI88897.1|2508856_2509489_+|DNA-binding-protein
MLSHEQIWTAIDRLAERHGFSASGLARRAGLDATSFNRSKRVGPDGRKRWPSTESIAKVLAATGASLDDFLHLVDSGQAPARTMVPLVGLTQAGSGRLFTEEGIPTGGPGWDEIEFPDLGDDHAFALEVQGDSMLPLYRDGDVLIVAPNAGIRKGDRIVARLTNGEVLAKELRRRTARTIELASLNPDHEDRMVPLADVAWMARVMWVRQ
>CP029173.1|AWI88896.1|2508292_2508643_-|DUF952-domain-containing-protein
MALVYKICPRDLWRDAEALGRFTGAPVDHADGFIHFSTAGQVVETAARHFAGQDDLLLVAVEGDDLGPALRFEPSRGGALFPHLYGDLPLSAVRSVTALPLGPEGRHVFPAEIVPA
>CP029173.1|AWI88895.1|2507219_2508296_-|dihydroorotate-dehydrogenase-(quinone)
MIDALFPLARPLLHGLDAETAHDLTIRGLSLLPPRRPPADDAALAVEVFGRHFPNPVGLAAGFDKGARVADALLGLGFGFVEVGGVVPRPQPGNPRPRVFRLPGDRAVINRFGLNSEGLDTVADRLKAREGREGIVGVNIGANKESADRLADYVACTARLAPHVAFITVNVSSPNTPGLRDLQGEAFLDDLLARVVAARDESGSSAAVLLKIAPDIALEGLDAMTATALGRGIQGLVVSNTTIARPASLTEAALAKETGGLSGRPLFGPATRLLAQTYLRVGDRIPLVGVGGIDSAEAAWTKIRAGARLVQLYSALVYEGPGLVGTIKRGLSQRLRAEGLTSLAPVVGRDAADLAQGA
>CP029173.1|AWI88894.1|2504571_2506890_-|CbbBc-protein
MDRSQGLPKRSSAAGGWGALKSCGKFLLGSRAPLSGARALLSANQPDGFDCPGCAWGDPAHGSSFEFCENGVKAVSWEATDKRLTPRFFAKHPVTELRGWTDYALESEGRLTHPMRYDAQSDTYRPVEWEEAFAEIGATLRGFDHPDRVEFYTSGRASNEAAYLYQLFARAYGTNNFPDCSNMCHEASGIALTQAIGIGKGTVLLEDFERADAIFVVGQNPGTNHPRMLGDLRRAAERGARVVVLNPVRERGLERFADPQNSVEMLRGASRPIASHYYQPKPGGDMAAFRGIAKVVFARDTAALAAGKPSLLDHAFIAAHTSAFDEYRAAVEATTWEAILDQSGLTREDIETAADVYLGAEKVIATWAMGVTQHRHSVATIREIANLLFLRGHIGRPGAGLCPVRGHSNVQGDRTVGINEKPPAALLEALDRAFGLTMPRKHGHNVLGAIGAMLDGSSKVFIGLGGNFVRATPDTRLVEKALAGCELTVHIATKLNHSHLVPGRVAYLLPCLGRTEIDRNSRGKVQIVTVEDSMSMVHGSGGINKPASPHLRSEIGIIAGMAAATVGSERIDWAALADNYDLIRDLIERTIPGFAGFNTRVRRPRGFMLRNLAAERVFETATGRAGFSSGPLPVATEHQRASRQGDTFVLQTFRSHDQYNTTIYGLDDRYRGVYGERRVVFAHPDDLAELKARAGERVDLVCVHSEDGIERVAEDFRLVPFDMPRGSLAGYYPELNVLVPLSAFGEFSDTPTSKSVLVQVRARAANDVGKAA
>CP029173.1|AWI88893.1|2504272_2504575_-|hypothetical-protein
MSEPAADAETFLAATDTIAALRPELSLLEAGILAGLHLGLAADSRSFARIFGVEHALVLRAVEGLSGESLLTVTARDGRTQRTRYAASATGSAMLTALAA
>CP029173.1|AWI88892.1|2502285_2504253_+|histidine-kinase
MDRSGSPPVQPVHGEMAGRIRAYDWTSTTLGAAETWPPSLKATISLLLGCGFPMIALWGPNLIQVYNDGYRDLMGLKHPAGLGQPTRACWPEVWHINAPIYERVWAGETLTFEDALYPLTRSGRLEDAWFTLTYSPLRDDSGAIAGILVILVETTSRVLADRALRKSEARFRAELERQVQERTAELQASRDLLKATMDSSMDMIQVFKAVRDASGEIVDFQWLLNNHTSESRYGEVSGQSLLERNPGVVQEGIFDTFKRVIETGQPATAERRYVHEQFDGWFFQCAVKLGDGVATTTKEISAWKAAQEEVLRLRDEIAQAALRESEDRFRTLASLIPVLLWRSDESGQQNALNEAWLAYTGQTLPQSQDGGWLEAIHPDDRDASQEAFRVGREQQRLIEVQPRIRRHDGEYRWFLVRQAPIVDAEGHVTQWIGAAMDIHELHDLQERQAVLVAELQHRTRNLLGVVRSIAHQTMVQTGPTERFREQFNDRLAALSRVQGLLSRSEQEPITLRTLIRTELEALGAGDFADRIHVAGPPVRLRKASVQTLALAMHELATNARKYGALTTEHGRLSVTWRADRNEQGDGNLLIEWIEEGISRPRETYGPTRRGYGRELIERAMPYALNAKTRYELGETRLLCAIELPLGERSGEMSTA
>CP029173.1|AWI88891.1|2499771_2501907_+|TonB-dependent-receptor
MSRKRYGLGRWAGIGIAGLVVSPLQAEEVSLDEISVTSDRKTRREGAASGPTPNPAGVLPVVADRFATVSVVSGADLARAQPTSLGEALFDKPGLSATTFAPGSASRPIIRGLDNHRVRILENGTGVQDMSDLGEDHAVPINPLINDRIEVIRGPAGLRYGSQAVGGVVSVENNRIPTSIPSGGIAGRVTTGYSAVDNGRNAAATVDAGSGNVAVHADAFKSAADDYNTPLGIQRNSFNRSQGGAFGTSYLFDRGFVGLSFSHFDSVYGIPGLSSAAQRTRLDPVQDKLQARGEYRPLDGPFAAIRFWAGGSNYRHNEFGIDANGVEGIEAVFKNRAAEGRIEFDHAPVDLPFGTLTGQFGVQADRRKLRISGAEGGLLRPTDTRVQAAYLFEELALGGGLRFQAAGRIEGNRVAGTQALFPSDFLPDGPGDEPLESRRIRRFAPKSASLGALQDLPYGFVASLTGSYVERAPTSPELFSRGPHEASATFEIGDPNLKLERARTVEVAIRRAEGPFRFDATGYVTRYTGFVYKRLTGFTCGDTFGSCGIGGGDLRQVAYSQAGATFAGAEIASQIDLVPVGDGFAGISAQYDFVRAQFDDGSFVPRIPPHRVGGGVFLRADGWFAQVSLLHAFAQTQTGVLETPTPGYNDLKVEIAYSRPLDPAVHGLSEVTLGLRGTNLLDDVIRNAASFRKDEVVLPGRNVRLFLTARF
>CP029173.1|AWI88890.1|2497012_2499625_+|cell-division-protein-FtsK
MRSLRRSASPYDTFVDSLRPFLAKRLTECGGLILFTGAVALTVALATWSIDDPSLNHATDQRAHNVLGRPGAVVADLAMQLLGLGSIMLALPPVLWGMRLMRERDLPHGGVRMALWFVGVLSASAVASAVPATARWPLPTGMGGVAGDALLAGTRMLVGPLAHFAGFLFAAIAILSLTAACRVTKPDFEEDEEGPYGAPRPAPRPGRAAAHEERHDSDEPSLGILSLGALAQAVMRGRASLRTRLESWQAPAEEGEGLAYAGASPALAARRAFADPEEAPWAPHAREHADVSGRREPQFEPQDDEADDGPVRAVPPRPALDAREAEAAALEPSTRVSRPLPQAPAARPRPAESRPEVGEYRLPALELLARPREAAPGSEVSAEALEQNATMLEATLQDFGVRGDILAVRPGPVVTLYELEPAPGTKSSRVIALADDIARSMSAVSARVAVVPGRNAIGIELPNAKRETVFLRELLASEDFVESKHKLALCLGKNIGGEPIIADLARMPHLLVAGTTGSGKSVAINTMILSLLYRLKPEECRLIMVDPKMLELSVYDGIPHLLSPVVTDPKKAVIALKWAVREMEERYKKMSKVGVRNIDGFNARLEEARARGETLTRTVQTGFDRTTGEAVYEDEVMDLNPLPYIVIVVDEMADLMMVAGKDIEGAIQRLAQMARAAGIHLIMATQRPSVDVITGTIKANFPTRISFQVTSKIDSRTILGEMGAEQLLGQGDMLFMAGGGRTTRVHGPFCSDSEVESVVAHLKRQGRPSYLEAVTAEEGEIPAGAAPSEDGPAFDDGQFGGGEGGDLYEQAVAVVLRDKKASTSYIQRRLQIGYNRAASLMERMETEGLVGPANHAGKREILVEAEPQDY
>CP029173.1|AWI88889.1|2495546_2496803_+|porin
MTIKTMFLAAGAALTTLSATALPVLAADMPAAASAPVVVEEHCKAAISTPTFGGLIKANPNPACFVTGLGDIYVGGAITGFAYSQTNAFGILSPSVEQDRYGRVDFTNLQGWIQKADGPLQFYVHAGLYSIPALGLPLYSSFEQTQSLFGPVPVAFGKWQINDEWSIQAGRMFTNIGSELLFSYQNLNISRGLVFNQENFINQGVQVNYASGPFAAAVSVNDGFYSGELNWVTGFATYKLDDSNTIGINGGTHFSDFDSSTRSPRFQFATINSLQNSSIISVNYTFANGPWIIAPYFQYTTVDRKDNYFSPIIGGETWGGALLAGYAFNENFGLAGRVEYIAQSGTRFDTLSATSLLYGPGSSAFSFTITPTFTWDRYFVRGEFATVQAYDVTPGFGFGRDGTKRSQERYLVETGFTF
>CP029173.1|AWI88888.1|2493708_2495205_+|ammonia-channel-protein
MKPRNLLALGLGGAALGLLLVEPSLAQAPTVEPAAAAAAPVPNKGDTAWMLLSAILVLLMTVPGLALFYGGLVRTKNMLSVLTQVFAIASIVCLLWVTYGYSLAFTNGGGLNDFVGGFSKAFLKGVDPNSVAATFSNGVVIPEYVYICFQMTFAMITPGLIVGAFAERMKFSALVVFTILWVTLIYFPMAHMVWYWGGPDVFADAARKLAAAGGEANAAAKAEYDAVLGDAGMLFKWGALDFAGGTVVHINAGIAGLVGCLMLGKRIGYGRDLLAPHSLTMTTIGASLLWVGWFGFNAGSNLEANGAAGLAMINTFVATAAAAVSWLFVEWAAKGRPSLLGMLSGAIAGLVAVTPAAGFAGPMGSIVLGLAAGAVCFVMCSTVKNALGYDDSLDVFGVHCVGGILGAIATGILVSPDLGGAGIPDYTTKPGELTVGAYDMVAQVITQAKAVGFTILWSGIGSAILYKLVDLTIGLRVTQEEEREGLDIADHGERAYNY
>CP029173.1|AWI88898.1|2509617_2509947_-|hypothetical-protein
MTLSPSSLEAIQALIVGLALAGLLASAFEYATNRRASFRLLEAGGVTALVALPMIAVVAPFIILRNTLRGRRFEHRPIPFVMIATMIACGWSLLSGQIALGMAHRLAGL
>CP029173.1|AWI88899.1|2510100_2510316_-|DUF3126-domain-containing-protein
MTKTEVAKLQDYLRRKFANANIRVVAMKTGDSAEVFIGDESIGVLADDKEDGDDSFTFRMAILDIDLEEDA
>CP029173.1|AWI88900.1|2510455_2511316_-|serine-O-acetyltransferase
MSASPSLSPASGREGIAGIVDPLWTRVRTEAETVVRDEPQLASFFVATILNHPSLEAAVAHRVATRLGHASLSTELVAHGFHEALQDDAYIGQSMRADILAVMDRDPATTRAIEPLLYFKGFHAIQAHRLAHWYWGQGRRDLALYLQSRSSEVFQTDIHPAARIGRGVFFDHATGLVVGSTAVIEDDVSILHAVTLGGTGKHGGDRHPKIRRGVMIGAGAKILGNIEVGACARVAAGSVVLRSVPPHTTVVGVPARVVGAAGCAEPARSMDQLVAMSEFVDIAGGI
>CP029173.1|AWI91655.1|2511575_2512475_-|transcriptional-regulator
MTDPAEQEASFLNELGRRVRHARTVRGLSRKLLSQASGLSERYIAQLESGQGNVSIILLRRVANAMGMRLDDLVSSQEASPDWRVIRDLLEQANPDQIALAKAALAGSTGADAQTVRRRVALVGLRGAGKSTLGRMAAAHLGWRFVELNTEIERENGLSVREIFAIYGQEGYRRLEQKALRGLAEQPGPMVLATGGSIVAEPLTYDLLLSSFYTIWLQARPEEHLQRVRDQGHVEGKGDPTSVLEDLRAVLLSREPLYARASATVDTSDVPVETMAARLIEVIEDRFSGHDNGGKRPIA
>CP029173.1|AWI88901.1|2512766_2514386_-|ABC-transporter-substrate-binding-protein
MRRRNRSAGFVAALAAALLAGASAGQARTLVYCSEGNPESLDPGLVTTTTAMSATWQLFNSLVEFAPGTTNLRPALAESWQVSDEGRTYDFTLRAGVRFHAQPGFTPSRALNADDVLFSFLRQWKPDHPYHGVGGDFAYFRDLGLAGLIKGIERLDERRIRFRLKEPDATFLPNLAQAFGAILSAEYAEHLARRGTPEVLARAPVGTGPFRFVDYRPDVALRYRRFPDYWRQPAEAGAGAVDALVFSITPNTAVRLTKLKAGECHVMAFPGTADLEAVRADPDLTLVSGEELNVAYLALNTARPPMSDPRVRRAVSLAIDRRAIVEAVYGPAGTVAHNPLPPTSWAFHSELPEPVFDREAAGRLLAEAGFADGFETDLWFLPVSRPYNPNGRRVADMIRADLARIGIRTRLTTRDWTAYRAALYGGEPTMMLYGWTSDNGDPDNFMNVLLGCRAAAPGGANLARWCDPAYDAAVQAARRTDDRGIRTRLYRDAQARFREAAPWVPLAHTVVHMAVRRTVNGFRADPLGRTLFEGVTLAE
>CP029173.1|AWI88902.1|2514382_2516674_-|HAMP-domain-containing-histidine-kinase
MRVGRKIALVGGVPILVAAAIAAAGWFLLAQGERARAGALLAARVYHDLIQARSVRDDFVAARADERDTIATRFFDLTGPAGSGLETLQGQARTRRQAERAAAARQSLDRYVARMREFSAVARENDGLIAEMGRRASRLTDLAEQARQRQQASNVDLAWTLTGKVNRLRATRDAVTGLNAVQAAAWQLALGRVRGGTAEAERTERARLAHAGRDVAAALRATSRETEAAEAERLTALDAALDSAAGDRLTEWGERLLKIMTSEQRTLDDEVAQLLAYAGEANATGQATQNIGITTLKLGQRTAEALVRRDAEAVSAMLGEGEQLSASAAALPISPLIQSEMIEAIDGWRARLATTVDGLKRQNAMIAEMDGLAAGLSEAARALNDDALEDADRFGTFLGQLLLAGAAVGLLLGALVALAVARSILVPLRQLQGDMIALAADPKAEGLSGTQRTDELGDIARATNFFVTEIGRRERALRRAKDQADHALHDLHQAQDDLIRAEKLASLGQLVAGVAHEINTPLGIALTTATLVRDETRTFQGLVAAGTLSRSRLTHFVDRVGEGTQLLCANLTRAADLVHGFKQVAVDRASDERRRFDLDVWLGELLASLQPMLRKGGHRIERDVPSGIVVDTYPGVLAQIVTNLVANAVVHGFAAARRPGTITVRVSNTGSLVRLEVSDDGSGIAPEHLGRIFDPFFTTARSRGSTGLGMHIVHNLVTAKLQGRITVESELGRGTRARLEFPRAPGDAERPGAARRPAGVQAP
>CP029173.1|AWI88903.1|2516795_2516999_-|hypothetical-protein
MPHFSKEGLEASPEALAKLREILHGRQQGGRDSRTVPSTPTKEGRFGTSGGRGAPVRRRRRTDLAGV
>CP029173.1|AWI88904.1|2517010_2517268_-|hypothetical-protein
MQGLVSMIAVSAVLSAGLVAGLTATGAAARPKPAVTAAPIEAPALKAPESRPSTTVSPCTAAWPYQSAACATDGRKVRVIALTGR
>CP029173.1|AWI91656.1|2517424_2518180_-|DNA-binding-response-regulator
MTPTGPHIAVVDDEADARAMVGEYLRLHGFDVALCEGGRALRAHLQIRTPDLIVLDLNMPEEDGLSIVRDLKARSPIPIIMLTATASPIDRVVGLELGADDYLPKPCELRELVARVRSVLRRAQGTPPPPAPASSPASAPAASPETPSRTIRFGTKWLELDALRLRDDAGMEQPLTRSEFDLLKAFADHPKRALSRERLLDLADARDPDAFDRAIDVRINRIRKKVEPDPANPRYIRTVRGLGYIFRPEGD
>CP029173.1|AWI88905.1|2518574_2520401_+|histidine-kinase
MRVASKSAKGLHAMNDATDDDWLELIPDEVAETPARAAAWTIAVIDDDPAVHEGTRYALAGYSLDGRGLDILSAHSAQEARALLAERRDVAIVLLDVVMETDDAGLRLVDYIRRELREETVRIILRTGQPGQAPERRVIVDYDINDYKAKTELTADKLFTSLTAALRAYQQLRRLDETRRGLEIIIDAAPMLLDHKSMQRLAEGVLTQVASLLNVDCAGILVLREDERDHKREGGFSVLAGSGLYGGYVGRDPGWPLDPGIQPLVEQAFAARRHSFGDGLSTLYVQTASGSEIVALIDTDRPLSDTDRALITLLAGRLSVAFDNVILYERLQRANVTLEQRVVERTAELIRANRRLDMQRSDLRRANSLKTEILGTIAHDLKNPLSVILGRSEMLTDLIGLDPGEPSGSEQARAAMRTQVDHIRTSATRLIDMIDSLMADAMNDALDITLRREPVDLAGLAREVCEANRPLADSKGQSLTLDRAAPLHLCGDAERLREAFDNLVSNAIKYSYPSGAITVSVREEGGDYVCAVADQGPGLSPEDAGRLFGRYQRLSAKPTGGEGSTGLGLSIVKRIAELHGGRAEAFSDGPGRGAVFSMRFPKETVGLV

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Crispr_ID: CP029173_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029173_13

5147535-5147619

Orphan

Consensus_repeat	Method
GAGCATCGTCCCGAAAGGTGGTCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029173_13

>merge|CP029173|13|5147535-5147619|CRISPRCasFinder
GAGCATCGTCCCGAAAGGTGGTCGCCGGCTTTCGGAGAAAGACGATGCAAAGACAAGAGGAGAGCATCGTCCCGAAAGGTGGTCG

>CP029173|13|13|5147535-5147619|CRISPRCasFinder
GAGCATCGTCCCGAAAGGTGGTCG	CCGGCTTTCGGAGAAAGACGATGCAAAGACAAGAGGA
GAGCATCGTCCCGAAAGGTGGTCG

Protein	Signature genes	Signature genes Name	Protein_function
CP029173.1\|AWI91073.1\|5144461_5144911_-\|Tellurite-resistance-protein-TerB	unknown	unknown	gnl\|CDD\|143580
CP029173.1\|AWI91081.1\|5156820_5157597_+\|endonuclease	unknown	unknown	gnl\|CDD\|377028
CP029173.1\|AWI91083.1\|5159140_5162278_+\|double-strand-break-repair-protein-AddB	unknown	unknown	gnl\|CDD\|274300
CP029173.1\|AWI91084.1\|5162274_5165709_+\|double-strand-break-repair-helicase-AddA	unknown	unknown	gnl\|CDD\|274298
CP029173.1\|AWI91079.1\|5154021_5154633_-\|nitroreductase	unknown	unknown	gnl\|CDD\|380315
CP029173.1\|AWI91850.1\|5154801_5155599_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|181249
CP029173.1\|AWI91067.1\|5137838_5138342_+\|DUF3016-domain-containing-protein	unknown	unknown	gnl\|CDD\|378666
CP029173.1\|AWI91066.1\|5137626_5137842_+\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI91075.1\|5145738_5147376_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|225719
CP029173.1\|AWI91074.1\|5144958_5145705_-\|mannose-1-phosphate-guanylyltransferase	unknown	unknown	gnl\|CDD\|133044
CP029173.1\|AWI91082.1\|5157490_5158927_-\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
CP029173.1\|AWI91068.1\|5138426_5139326_+\|diacylglycerol-kinase	unknown	unknown	gnl\|CDD\|224513
CP029173.1\|AWI91070.1\|5140229_5141687_-\|sodium:solute-symporter	unknown	unknown	gnl\|CDD\|223664
CP029173.1\|AWI91077.1\|5150651_5152058_-\|adenosylhomocysteinase	unknown	unknown	gnl\|CDD\|377487
CP029173.1\|AWI91076.1\|5147645_5150159_-\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP029173.1\|AWI91069.1\|5139322_5140207_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|224327
CP029173.1\|AWI91080.1\|5155800_5156232_+\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI91071.1\|5141683_5141887_-\|permease	unknown	unknown	gnl\|CDD\|371707
CP029173.1\|AWI91078.1\|5152225_5153854_-\|AMP-dependent-synthetase	unknown	unknown	gnl\|CDD\|341275
CP029173.1\|AWI91072.1\|5142042_5144091_-\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|236848

Protein	Function_ID	Function_description	E-value
CP029173.1\|AWI91073.1\|5144461_5144911_-\|Tellurite-resistance-protein-TerB	gnl\|CDD\|143580	cd07176, terB, tellurite resistance protein terB. This family contains uncharacterized bacterial proteins involved in tellurium resistance. The prototype of this CD is the Kp-terB protein from Klebsiella pneumoniae, whose 3D structure was recently determined. The biological function of terB and the mechanism responsible for tellurium resistance are unknown.	2.36814e-12
CP029173.1\|AWI91081.1\|5156820_5157597_+\|endonuclease	gnl\|CDD\|377028	pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family. This large family of proteins includes magnesium dependent endonucleases and a large number of phosphatases involved in intracellular signalling. This family includes: AP endonuclease proteins EC:4.2.99.18, DNase I proteins EC:3.1.21.1, Synaptojanin an inositol-1,4,5-trisphosphate phosphatase EC:3.1.3.56, Sphingomyelinase EC:3.1.4.12, and Nocturnin.	1.87258e-08
CP029173.1\|AWI91083.1\|5159140_5162278_+\|double-strand-break-repair-protein-AddB	gnl\|CDD\|274300	TIGR02786, conserved_hypothetical_protein, double-strand break repair protein AddB, alphaproteobacterial type. AddAB is a system well described in the Firmicutes as a replacement for RecBCD in many prokaryotes for the repair of double stranded break DNA damage. More recently, a distantly related gene pair conserved in many alphaproteobacteria was shown also to function in double-stranded break repair in Rhizobium etli. This family consists of AddB proteins of the alphaproteobacteial type. [DNA metabolism, DNA replication, recombination, and repair].	0
CP029173.1\|AWI91084.1\|5162274_5165709_+\|double-strand-break-repair-helicase-AddA	gnl\|CDD\|274298	TIGR02784, ATP-dependent_nuclease_subunit_A, double-strand break repair helicase AddA, alphaproteobacterial type. AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologous between the alphaproteobacteria (as modeled here) and the Firmicutes, while the partner AddB proteins show no strong homology across the two groups of species. [DNA metabolism, DNA replication, recombination, and repair].	0
CP029173.1\|AWI91079.1\|5154021_5154633_-\|nitroreductase	gnl\|CDD\|380315	cd02138, TdsD-like, nitroreductase similar to Burkholderia pseudomallei TdsD. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to Burkholderia pseudomallei TdsD, may be involved in the processing of organosulfur compounds. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.	2.07684e-71
CP029173.1\|AWI91850.1\|5154801_5155599_+\|enoyl-CoA-hydratase	gnl\|CDD\|181249	PRK08139, PRK08139, enoyl-CoA hydratase; Validated.	8.53451e-127
CP029173.1\|AWI91067.1\|5137838_5138342_+\|DUF3016-domain-containing-protein	gnl\|CDD\|378666	pfam11454, DUF3016, Protein of unknown function (DUF3016). This is a bacterial family of uncharacterized proteins.	2.71081e-49
CP029173.1\|AWI91077.1\|5150651_5152058_-\|adenosylhomocysteinase	gnl\|CDD\|377487	pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hydrolase.	0
CP029173.1\|AWI91075.1\|5145738_5147376_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|225719	COG3178, COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only].	1.93955e-109
CP029173.1\|AWI91074.1\|5144958_5145705_-\|mannose-1-phosphate-guanylyltransferase	gnl\|CDD\|133044	cd06422, NTP_transferase_like_1, NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.	9.08045e-107
CP029173.1\|AWI91082.1\|5157490_5158927_-\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	2.52368e-117
CP029173.1\|AWI91068.1\|5138426_5139326_+\|diacylglycerol-kinase	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	7.17259e-43
CP029173.1\|AWI91070.1\|5140229_5141687_-\|sodium:solute-symporter	gnl\|CDD\|223664	COG0591, PutP, Na+/proline symporter [Amino acid transport and metabolism / General function prediction only].	1.81793e-65
CP029173.1\|AWI91076.1\|5147645_5150159_-\|two-component-sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.33029e-46
CP029173.1\|AWI91069.1\|5139322_5140207_+\|metallophosphoesterase	gnl\|CDD\|224327	COG1409, Icc, Predicted phosphohydrolases [General function prediction only].	2.00233e-29
CP029173.1\|AWI91071.1\|5141683_5141887_-\|permease	gnl\|CDD\|371707	pfam11755, DUF3311, Protein of unknown function (DUF3311). This is a family of short bacterial proteins of unknown function.	1.15863e-11
CP029173.1\|AWI91078.1\|5152225_5153854_-\|AMP-dependent-synthetase	gnl\|CDD\|341275	cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS). MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. MACS enzymes are localized to mitochondria.	0
CP029173.1\|AWI91072.1\|5142042_5144091_-\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	6.2298e-96

>CP029173.1|AWI91075.1|5145738_5147376_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MSEVPDSTAGSPRPGPSQGEAQMPSTSAPPRRAAWEVLLPEEGATEDMAAFLAGILRPGDLVALSGGLGAGKTTLARAMIRELAGDPRLEVPSPTFTLMQPYETRSGRTVIHADLYRLRGPDELVELGFDELSETAITLVEWPERLGHRENSTLTVELSLRAEYGEEARLIRIDGTGDMRERIDRARAIRALLARSGWDEAERVLMQGDASSRAYERLVKPGGETAVLMISPPRPDGPPVKDGKPYSAVVKLAESIHAFVGMDRALRAIGFSAPKILGENLDAGLLILEDLGSEPVIENGAPRPERYAEAVRLLAKLHATDLPTTVPVSEGIDHAIPNYDLEALLFEAELLPEWYAPAIRGTTLSPEARSTFRDLWADALKDLIAEPATWTLRDYHSPNLIWLPERTGLERVGVIDFQDAVMGHPAYDVASLLQDARVDASADFELRLLGLYIRERRGRDIGFDMQAFARAYAVLAAQRATKILGIFARLDKRDGKPGYLAHLPRIEGYLARNLAHPALAAVRAWHETHLPSLVAPRPDAEPAAS
>CP029173.1|AWI91074.1|5144958_5145705_-|mannose-1-phosphate-guanylyltransferase
MSAEPTPKKITRAFVLAAGLGKRMRPITATVPKPLVEVAGKALIDHALDRAAQGGIETAVVNVHWLADLMEGHLSHRTGAPAIVVSDERDALLETGGGVKKAIELLEGEPFVVFNSDSFWLEGPRPNLGRLIEAWNSDTMDILLLVAPTATSLGYEGAGDFDMDSDGRLSWRGEREVAPFIYAGVAILKPELFADTPEGSFSLTLLFDRAVKRNRLHGLRLDGQWLHVGTPEAIQAAEARVHESARIV
>CP029173.1|AWI91073.1|5144461_5144911_-|Tellurite-resistance-protein-TerB
MGLLHAAIEQFRTTLKAYAGDEALMQAAVSACANVAVADGELMTEEFETALAGIRANPIIEKGYDSLMLEHALYEGLGRARTRAGRAENLVRIGAIAERPEEQRRNVFLVAADVADHEGIGREEHAALAEVGAALGLNGDALLRRFPEV
>CP029173.1|AWI91072.1|5142042_5144091_-|hybrid-sensor-histidine-kinase/response-regulator
MTLAVSVMGLTIAAAMLVLILVSLRRRGSVVPDTDMTEALQDRLWQIAESEERYRVLVEATTEVVVQRDGQGRITFASEGFAALLGVRPLELIGSTLSPQVIERGASTLRADGVRVVEERLMPVDGVPRWFSFIEMPAAGRADGPSWLRAGQDVTERVEAARSLDEAKSRAEAANVAKSRFLATVSHELRTPLNGILGMADLLLETRLDPEQRTYVEAFRTSGKALLGLVDGILDFSRIEAGRLDLAADPFDVAALVEGVVELLAPRAQDKGLEIALDIADDLAALHVGDADRVRQILVNLAGNAIKFTQAGGVGVSLARAGQDPGDGLVLTVEDTGPGIPEERIPILFEEFEQGEDSASHEGTGLGLAITRRLVERMNGTIEARSTVGRGSTFRVVLPLPAADGAEAARVPRLAPRKVLIVADSPFQAPFLARRLSRSGAAAVVVDSADAGLDALAGVAFDALIADRSLGDAAVRRLAAEATRCGVRCSLILLSPFDRREFGAPNAAGFDSYLIKPVRARSLFDRLLEPGSAQASLPTDATAQPAPAEPAPAAAPGRRVLLAEDNPINALLATKALERLGAQVILARDGLEALAAAEGQGPFDLALIDIRMPGLDGLEAARRIRAREAETGAAPLHLVALTANTGREDVAAAFAAGFDGFLPKPLNLRALPRLLDRRQEAA
>CP029173.1|AWI91071.1|5141683_5141887_-|permease
MKLIQWLAALPALGMLVGPFFLNRVEPMVLGMPLLLAWLVGCTVATSAIMALIYLTDPANREPEEGP
>CP029173.1|AWI91070.1|5140229_5141687_-|sodium:solute-symporter
MNAALLIIALAVVVALGLGLKARSGHDMDMEQWSVGKRGFGTLLVFLLMAGEIYTTFTFLGGSGWAYGKGGPTYYILCYLTLIYVISYWILPPAWRFAKERNLFSQPDYFAARYDSKSLGILVALVGIVALVPYMVLQLKGLGIIVATASYGAISPTLAIWIGAAVLTVYVMVSGVRGSAWTAVLKDFMILFVVIFLGVYLPYHYYGGIGEMFTAIDQAKPGFLALPDRGQSATWFASTTLLTALGGWMFPHIFASIYTASDARTFRRNAVFLPLYQLMLLFVFFAGFAAVLQVPGLTGPDVDLSLFKIALQTFPPWFVGIIGATGVLTALVPGSMILIAGSTLIAQNLYRPLARNATDATTGRLAKGIAPILALACVGFTLYGGETIVQLLLIGYAVVTQLFPAFFFSLLPRNPLTRAGAMAGILAGVAAVAVTVVGGYTLAKLFPGLPGPVQDLNIGVVALALNLAVAFAVSLAGGVRRTALP
>CP029173.1|AWI91069.1|5139322_5140207_+|metallophosphoesterase
MRRIAHISDLHFGRTDTAVVEGLAAELNRDPPDLIVASGDFTMRARRNEYAQARAFLDRLTAPWIAVPGNHDIAYFKLFTRFFHPFGRYRRFIARDTEPTFLDDEIAVVCLNTVRTWAPETDWSQGKITRAQIARTEERLAALPGHVFRIVVGHHPFMPPPWDAEARLVGRADEALDAFRRHGVGLTLAGHLHRHYARFAEAPETGAEPDTVTVDRGRAQAGGNRLLAVQAGSATSTRLRGNEPNAYNRIVIEDGRATVTVRVWTGAAFEDAREGDSLPGAAEERTGESEAAGR
>CP029173.1|AWI91068.1|5138426_5139326_+|diacylglycerol-kinase
MRIVLVANPASGAFAGGVTPDAIRARLRATGLDLAPEPDETLPLPDRLRSALHTEGVAAVAVAGGDGTLNCAAGLLAGSGVALGILPFGTMNLLAKDLGIPLDLDGAIAVLAAGQTRAVDVGYVNGHLFLINSVLGMPARMVRHREMFRGRRLGVSALLRLAAAALRHLGPYPRLSTVISEGGRRTRLRVRLLAVINNDYAEGPGKILERSQVDGGELTLYIARRLSPWRLARLALGFGLGRWRDGVGLERRGATRFAVSARRGALRVMNDGEVRLIAPPLRYRLMPRALTVIVAEPKR
>CP029173.1|AWI91067.1|5137838_5138342_+|DUF3016-domain-containing-protein
MRAAALALLAALTAFAASPAAAQVRVTFVAPERYTDASNRFGSGPSLRVVLAEMRRLFETLGNPVLAPGQTLDIAVLDIDLAGLDQPSFGPAQGVRVVTDITPPRFRLRYALKERGRTVLAAEEAVSDINFLLRANRLSSGQTFFYEREVLRDWFQARFVQRRPPPG
>CP029173.1|AWI91066.1|5137626_5137842_+|hypothetical-protein
MQTTSGAPILRRDLGVEETTESDNVVRWDGERLYVEQDIYHNGQLVHRKYRRTITEPVARALQAILKRSQQ
>CP029173.1|AWI91076.1|5147645_5150159_-|two-component-sensor-histidine-kinase
MGLERAARVLSRVGVLVVAAPVAALAEGAPSIEARPMLGAMQTHNVAGLAVVLGLILFATILSLVYLRERVGWTRKERALQDELAQLRGAHDRAEMLLHSEHQVLIAWAGRGEPSIVGDAGFAQDFRNQDARGIQSASRHLLTFGTWLTPQDAQLLEAAVATLRERGTGFRTNLRSLAGRFIEAQGQAVGGRALLRLRETTEERRELIELRHTLDEAKSRLAALAGLLDAIPQPVWHRSQDGALTFVNAAYAAAVEAPSRETALHHGLELLDRSAREQIARQVRRPGLAPQPLRLSAVVAGARRTLDVSESTLEAGRVGIAVDVSELESVRADLQRQMDANVRTLDQLPTAVAIFDARQRLIFHNAAYQRLWDLDPAFLEGRPLDGEILDRLRAARKLPEQADFRSWKADVLAAYRAVEPTDTPWYLPDGRTLRVVADPNPQGGLTYLYHDVSESMKLASRYDALMKEQAETLEALKEPVAVFGADGRLTVANRAFAATWRLDPATLAGKPHVDAVIAACRALTPDQSPWAGIRQSITGLSETRSGHGCRLDINDGTVLDCSSQPLPLGATLLTFIDVTASANVERALTEKNDALERASQLRDTFVHHVSYELRSPLTNIIGFTQLLGDETVGALNERQREYSEHIMRSSAALLVIINDILDLASIDAGSLELQRETIDVRSTVEAAARGIEDRLAESDIGLDLDVPEDIGSVFADGKRVRQILFNLLSNAVGFSAPGQQVRVEARREGTALRLTVIDRGRGIAPEVIDRVFDRFESNTLGTKHRGVGLGLSIVRSFVELHGGRVEIHSAPGAGTRVTCLFPVETPPGKGSLAEAAE
>CP029173.1|AWI91077.1|5150651_5152058_-|adenosylhomocysteinase
MAAAKDYIVRDIGLADYGRKEISIAETEMPGLMATRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMILDDGGDATMFVHLGLRAENGDTAFLDKPESEEEEVFFALLKKKLAEKPKGWFAGLADSIKGVSEETTTGVHRLYNLAKEGKLLFPAINVNDSVTKSKFDNLYGCKESLVDGIRRGTDVMMAGKVAMVAGFGDVGKGSAASLRNAGCRVLVSEIDPICALQAAMEGYEVVTMEDAAPRADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQVAGLKNLKWQNIKPQVDEIEFADGHRIILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELWTNPGKYERQVYTLPKSLDEKVAALHLEKIGVKLSKLRPDQAAYIGVSQTGPFKPEHYRY
>CP029173.1|AWI91078.1|5152225_5153854_-|AMP-dependent-synthetase
MAVPEPADTYERLVADFRWEIPERTNIAADVCDRWALSEPDRTALLVLGADDRPEPVSYGRLRSDSLRLAAALAARGIGPGDRVAVLLLQSAAVVVTHFATYRLGAIALPLAGLFGVEALRHRLTDSGARAIVTDAAGLTKLERLRADLPDLTTILSIDGADGPAEDFFAVLADAPDGFETRATGPDDPALMIYTSGTTGLAKGALHGHRVLLGHLPGWTLMHGFPAEGTGLMWTPSDWAWAGGLLNVLMPSLRLGMPVVAKASGRFEPEAAFRLMADLGVTHAFLPPTALRMLRSVANPRATFDLSALRNIASAGEALGAETFEWARAALGLTIGEAYGQTECNLVLASSARIGVARAGATGKPVPGHRVAVLRADGTEADIDETGEIAVRAPDPVLFLGYWNQPEATAKKFRDGWWMTGDRARRDADGYIRFVGREDDLITSAAYRIGPAEIEACLCAHPAVALAAAVGMPDPLRTEVVKAFVTLRAGFSPSDALAVEILAFAKARLSAHEVPRTLAFRDALPMTTSGKIIRRQLRNEPA
>CP029173.1|AWI91079.1|5154021_5154633_-|nitroreductase
MTEEPTRPVTRTPDHAIEPIFAERWSPRAFTGEAVPEAELFRMFEAARWSPSAYNSQPWRFLYALRGTPEWDTFFDLLVPGNQKWAKDTGALVILVSNSLMKVGDEFKPSASHSLDAGAASLAFALQANRQGWHVHGMGGFDKERAVTVLNVPEHHRVEAAYAVGRATPWAELTEEQRAKERANARRPITDFAFRGGFPQRED
>CP029173.1|AWI91850.1|5154801_5155599_+|enoyl-CoA-hydratase
MPVSETGQTPLLLRTDHHGVATLTLNRPAARNALSLSLLEALRDAFAALAEDGSVRAVVLAAAGPAFCAGHDLKEMTGYRREADRGAKRFEELFALCSDVMMAIPALPQPVIAAVEGVATAAGCQLVASCDLAVAGAQARFATPGVQIGLFCSTPMVALSRNLSRKAAMRMLLTADMAEADEAQRLGLVNDVVEAGGALPAAQALAAGIAARSPYTVRVGKRAFYEQLEMPLADAYVHAGRVMLENMLARAAEEGIEAFLSRKGR
>CP029173.1|AWI91080.1|5155800_5156232_+|hypothetical-protein
MEEHRLPVLTTLKLALKDMAGIIMKMPVLCMTVMLVFLIIKIYKPSRDTFKTEGFTIWNISEAYFYFVLIVAVRAIFALPAYRFLIDGEDRMQRSFRESIEAALAYCAAYVIFKILPIFALGILVSPMAITNNLAFLFSTWLL
>CP029173.1|AWI91081.1|5156820_5157597_+|endonuclease
MLLRRNAITLPAPGPDSKKIVSWNLLRRTGAAVDCLVTLIEQERPDLLLMQEATKEIAALKDRVGGVYAWAQLPGRIHGLAMWSPVEWGKPPEIVTLPPGVLIDRVCQVLDWGAFGVANVHLSHGQVLNRRQLRRIESHLPVRAAVLGDYNIVGPALLPGFRDVGPRRPTHAMVDVVPLRLDRCLVRGLVCHERAVLPRGLSDHHPIVVRLSPAPEGAAAVGRFRGMAEAVGRLRRAGARGAGGRRGRPASDGSGASP
>CP029173.1|AWI91082.1|5157490_5158927_-|cardiolipin-synthase
MEEVLTRWLGTTASLRTEIVAAIGLVISVGVSVHVLLRKRVVGAAIGWIGLAWLAPVFGSLLYITFGINRVERRARRLKRRPSQTVDDTPQLSAHVPEPYRALDRAVQAITGLPTVAGNRFAMFRNGDEAYPAMLAAIGEARRSVALSSYIFRDDATGRAFCDALKAAQDRGAEVRVILDGIGSGYFFPAAWRRLRRLGVPAGLFMHSALPWRMPFLNLRTHKKLLIVDGRVAFTGGVNISDGNRVAQKPDFPIRDTHFRIEGPVVEHLTQAFIADWLFVADEELDGEAWLPPLAPAGGVTARVVTSGPDADIEKIATVILQAITCAKESIRLTTPYFLPNDLIVNALCLAATRGIEVDVVIPKKSDHRFVDWATRGHIDPLLKSGVRIWIDGPPFDHSKATTVDGQWCFIGSANWDSRSFRLNFELNVEVYDTELARRLEAFIMGKRQTRLTLDDLDARLLPVRLRDAAVRLLLPYL
>CP029173.1|AWI91083.1|5159140_5162278_+|double-strand-break-repair-protein-AddB
MSARAAPRVFTIPPGAPFLPTLAEALVSGRLVGAVGHDPLALAAVTLYLPTQRAVRALSTVLAQRLGGAALLPRMIPLGEADEAELDLSSNTLLETPEDLLYPSIPALERRLILARLVQKWAETVDRELLPIDDEVPFLVPSSPADAVALAADLEGLMDALTVEGLPWSEIASAVEAEHSRYFRLTLDFLRIAAEHWPDILAARSLADPAARARRLVLAEAARLDRDRPDDPVIVAGSTGSVPATARLIAAVARLPRGAVVLPGLDLHLDEEGWEAIDGAGGTREEIAHGHPQAILHALTGPRGLAAGRTEVETLGNLSSEAVAREKLLSQALRPAETTDAWARLDPAERVTLAREGMAGLAVVEAADEREEALVAALALRETLETPGATAALVTPDRGLALRVSAELARWGIAAEDSAGLSLARSQAGRFARLVAELAAEVSPARVIALLAHPFVRLGLSRSEVVRAAAALEIGGLRGPAPIPKNSFEGMRAAVALQRNATERVPRAKKRLKPIDWDLSENILDRLEIALDAFRTDLHPATGNLVALAALHREACERMMGGVEADEAIDDPSLDALDGLFDDLESAEQEDLPGRFSDYAAFFTALARDRTVACAQRNAHPRLRILGPLEARLLSVDRIVLGGLDEAVWPVRQTTDAFLNRPMRGDVGLSPPERRIGQAAHDFVQGLGTHDAVVTRAAKREGSPTVPSRFLQRLRAFGGDAVWAGALARGQRLRGLAAILDRGQEAPPPRLKRPAPRPDPALFPERLSVTEIETLVRDPYSIFARHILGLEALEPMAVVPGAAERGSLIHKILGDFSQAHPGPLPTDAETLLYTIAFEAFGPLQDQYPELYAEWFPRYERMAVAFLEWEASQRQGLRAIHAERSGKLTIPLGERTFTLSARADRIEARADGGYCIVDFKTGTPPSNRTVFAGFSPQLTLEAAMLMHGAFEGLKAASPPDLLYVHASGGRDPFRPIPIKPPPGDGRPVEAIVTEHLERLRGLIARYMTGEAAYPSRPYPQYVRAYNEYDHLARVLEWSLAGEGEAA
>CP029173.1|AWI91084.1|5162274_5165709_+|double-strand-break-repair-helicase-AddA
MNAPLTGFTVDDLTKAAQRRAADPRLSAWVSANAGAGKTKVLTDRVLRLLLDGAPPGRILCLTFTKAAAANMSIRVFQRLGRWVTLDDAALSAELIELTGERPARDTLRLARRLFARAVETPGGLKIETLHALCERLLHMFPFEANVPARFVVLDDNQSREAFEIETDNVLADAILGGNQDLSDALAVVGAEASGDTLREAIRAAMRARALFSDHRALEPALARLPGALALRDGASVETIEKEILEGSTLGDWREIAARLRTGKATDERLADGLVEAQAALDLGKALAPYRSVFFTDKDEPRAAKSFGTKAVPDDVKQALLDEQARLIPLFDDLRAARALARTRGLFRLAAEIHRRVEAQKTRLGALDFDDLIHKTLDLLSRVGASWVLYKLDRGVDHVLVDEAQDTNPQQWEILRTLTAEFAAGEGARGLTRTRFAVGDPKQSIYSFQGADPREFELTRRAWGRAAEGAGHDFADVSLRLSFRTANHVLAAVDAVFGVPEHFAGLSFDVGAPGTVHASARAGVPGAVELWGIEEPAEAEEPDAWAAPVDAPEPNAPAIVTARRIARAVKAWTTRGDACGRIWRPGDVLILVRKRSAAFEEVIRALKGLGVPVAGQDRLEVAGHIAVLDLVAVGRAGLLPADDLTLATALKTPLVGLTDDDLTRIAARRPFSETLEDALTRHAEAGDGAAIRGRAALQLWIQLAAENGPFGFYAALLGPHGGRSRLVARLGGEAGDAIDVFLAQAADAENGGDAPCLEAFLSDYVVRPGRGKSGLSVKRDLEAGRDEVRVMTVHGAKGLEAPVVVVIDGCEPLGRNDPPLLGLDHAADGPLPPVWTGGRTQDCAATLAARSALQARAREEHNRLLYVAMTRAADHLVIAPYRGATRETPASWCEMVRIGLERGLGPGEAVETEHGPITIWRDGSAAAFAAAAEATAAPELEAMPDWLFAKAAPEAEAAPPLSPSGALGAADGQRQPQRRQGDAEARRRGALVHALLEHLPRIEPARRAEAAERFARARAPALEEAKRRDLVRSVLRLIEAPDLAPLFSGQARAEVALSGRIVVDGVERDVTGRIDRLVVEDGRVILCDFKTGRPPAEDAPLPEREAAQVALYARLAAAIWPDHAITALLVWTSGPVVRRVERTV

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Crispr_ID: CP029173_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029173_14

5330541-5330635

Orphan

Consensus_repeat	Method
TAGAGCATCGTCCCGAAAGGTGGCCCCCGGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029173_14

>merge|CP029173|14|5330541-5330635|CRISPRCasFinder
TAGAGCATCGTCCCGAAAGGTGGCCCCCGGCTTTCGGGAAAAGACGATGCGGGAAGAAGAGGATAGAGCATCGTCCCGAAAGGTGGCCACCGGCT

>CP029173|14|14|5330541-5330635|CRISPRCasFinder
TAGAGCATCGTCCCGAAAGGTGGCCCCCGGCT	TTCGGGAAAAGACGATGCGGGAAGAAGAGGA
TAGAGCATCGTCCCGAAAGGTGGCCACCGGCT

Protein	Signature genes	Signature genes Name	Protein_function
CP029173.1\|AWI91192.1\|5321965_5322469_+\|pantetheine-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|234674
CP029173.1\|AWI91189.1\|5317041_5318166_+\|sodium:proton-antiporter	unknown	unknown	gnl\|CDD\|378455
CP029173.1\|AWI91197.1\|5325146_5325920_+\|damage-inducible-mutagenesis-protein	unknown	unknown	gnl\|CDD\|226918
CP029173.1\|AWI91199.1\|5330720_5331797_-\|choloylglycine-hydrolase	unknown	unknown	gnl\|CDD\|238885
CP029173.1\|AWI91206.1\|5338130_5338349_-\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI91870.1\|5335480_5335741_-\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI91202.1\|5334695_5335352_+\|glutathione-S-transferase	unknown	unknown	gnl\|CDD\|198298
CP029173.1\|AWI91204.1\|5337405_5337648_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226045
CP029173.1\|AWI91196.1\|5324342_5324750_-\|response-regulator	unknown	unknown	gnl\|CDD\|381145
CP029173.1\|AWI91194.1\|5323099_5323537_+\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI91193.1\|5322494_5323034_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|223725
CP029173.1\|AWI91191.1\|5319111_5321838_+\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
CP029173.1\|AWI91205.1\|5337653_5337887_-\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI91201.1\|5333476_5334571_-\|molybdenum-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226628
CP029173.1\|AWI91200.1\|5332362_5333388_+\|patatin	unknown	unknown	gnl\|CDD\|132848
CP029173.1\|AWI91203.1\|5335893_5336154_-\|hypothetical-protein	unknown	unknown	unknown
CP029173.1\|AWI91190.1\|5318195_5318795_+\|molybdenum-cofactor-guanylyltransferase-MobA	unknown	unknown	gnl\|CDD\|234725
CP029173.1\|AWI91869.1\|5325933_5327337_+\|nucleotidyltransferase	unknown	unknown	gnl\|CDD\|176458
CP029173.1\|AWI91871.1\|5336610_5337282_-\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|181841
CP029173.1\|AWI91195.1\|5323540_5324002_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|223725

Protein	Function_ID	Function_description	E-value
CP029173.1\|AWI91192.1\|5321965_5322469_+\|pantetheine-phosphate-adenylyltransferase	gnl\|CDD\|234674	PRK00168, coaD, phosphopantetheine adenylyltransferase; Provisional.	1.77702e-82
CP029173.1\|AWI91197.1\|5325146_5325920_+\|damage-inducible-mutagenesis-protein	gnl\|CDD\|226918	COG4544, COG4544, Uncharacterized conserved protein [Function unknown].	3.26193e-56
CP029173.1\|AWI91199.1\|5330720_5331797_-\|choloylglycine-hydrolase	gnl\|CDD\|238885	cd01902, Ntn_CGH, Choloylglycine hydrolase (CGH) is a bile salt-modifying enzyme that hydrolyzes non-peptide carbon-nitrogen bonds in choloylglycine and choloyltaurine, both of which are present in bile. CGH is present in a number of probiotic microbial organisms that inhabit the gut. CGH has an N-terminal nucleophilic cysteine, as do other members of the Ntn hydrolase family to which CGH belongs.	2.83519e-147
CP029173.1\|AWI91202.1\|5334695_5335352_+\|glutathione-S-transferase	gnl\|CDD\|198298	cd03189, GST_C_GTT1_like, C-terminal, alpha helical domain of GTT1-like Glutathione S-transferases. Glutathione S-transferase (GST) C-terminal domain family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pombe GST-III is implicated in the detoxification of various metals.	1.22534e-50
CP029173.1\|AWI91196.1\|5324342_5324750_-\|response-regulator	gnl\|CDD\|381145	cd18161, REC_hyHK_blue-like, phosphoacceptor receiver (REC) domain of hybrid sensor histidine kinase/response regulators similar to Pseudomonas savastanoi blue-light-activated histidine kinase. Typically, two-component regulatory systems (TCSs) consist of a sensor (histidine kinase) that responds to specific input(s) by modifying the output of a cognate response regulator (RR). TCSs allow organisms to sense and respond to changes in environmental conditions. Hybrid sensor histidine kinase (HK)/response regulators contain all the elements of a classical TCS in a single polypeptide chain. Pseudomonas savastanoi blue-light-activated histidine kinase is a photosensitive HK and RR that is involved in increased bacterial virulence upon exposure to light. RRs share the common phosphoacceptor REC domain and different effector/output domains such as DNA, RNA, ligand-binding, protein-binding, or enzymatic domains. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.22163e-16
CP029173.1\|AWI91189.1\|5317041_5318166_+\|sodium:proton-antiporter	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	2.25837e-152
CP029173.1\|AWI91193.1\|5322494_5323034_+\|peptidylprolyl-isomerase	gnl\|CDD\|223725	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones].	7.63801e-65
CP029173.1\|AWI91191.1\|5319111_5321838_+\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
CP029173.1\|AWI91201.1\|5333476_5334571_-\|molybdenum-ABC-transporter-ATP-binding-protein	gnl\|CDD\|226628	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism].	2.69061e-141
CP029173.1\|AWI91200.1\|5332362_5333388_+\|patatin	gnl\|CDD\|132848	cd07209, Pat_hypo_Ecoli_Z1214_like, Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.	3.0418e-48
CP029173.1\|AWI91204.1\|5337405_5337648_-\|hypothetical-protein	gnl\|CDD\|226045	COG3514, COG3514, Uncharacterized protein conserved in bacteria [Function unknown].	5.17904e-11
CP029173.1\|AWI91190.1\|5318195_5318795_+\|molybdenum-cofactor-guanylyltransferase-MobA	gnl\|CDD\|234725	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed.	3.0014e-67
CP029173.1\|AWI91869.1\|5325933_5327337_+\|nucleotidyltransferase	gnl\|CDD\|176458	cd03468, PolY_like, DNA Polymerase Y-family. Y-family DNA polymerases are a specialized subset of polymerases that facilitate translesion synthesis (TLS), a process that allows the bypass of a variety of DNA lesions. Unlike replicative polymerases, TLS polymerases lack proofreading activity and have low fidelity and low processivity. They use damaged DNA as templates and insert nucleotides opposite the lesions. The active sites of TLS polymerases are large and flexible to allow the accomodation of distorted bases. Expression of Y-family polymerases is often induced by DNA damage and is believed to be highly regulated. TLS is likely induced by the monoubiquitination of the replication clamp PCNA, which provides a scaffold for TLS polymerases to bind in order to access the lesion. Because of their high error rates, TLS polymerases are potential targets for cancer treatment and prevention.	2.57051e-66
CP029173.1\|AWI91871.1\|5336610_5337282_-\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	3.29186e-123
CP029173.1\|AWI91195.1\|5323540_5324002_+\|peptidylprolyl-isomerase	gnl\|CDD\|223725	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones].	5.31093e-66

>CP029173.1|AWI91869.1|5325933_5327337_+|nucleotidyltransferase
MAQDGARRVLAGLDAAARRLGLSPGMSAAQAQAMIPGLHLVPTAPEADAAALERLGLWCQRYAPIVALDPPDGLLIDVTGAAHLFGGEAPLLADLSARLERTGITARLALADTPGCAWGLSRFGAGGIVPPGGAAQALAPLPVAALRLGAEAVRALQEVGLTRIGGLTDKPRAALRLRFGAEILFRLDRALGHEPEPLTALAAPETPLVALRFAEPVGARESLERVVADLCARLVPELERRGLGARRLDLVFARVDRLDQAVRVGTARPSRDAAHLARLLTERLALVDPGFGIEEAWLGASRVEPLAESQASHLAAGPQAPDLAALVDTLLVRLGAARVYRLAPVESDLPERAVRRVPALAAPLGAVWPADLPRPARLLAPPEPVSAVAEIPDAPPLFFVWRNTRHRIARVDGPERILGEWWVAEAEADLTRDYYRVETEAGERFWLFRDGPMEAQGRWWLHGLGEA
>CP029173.1|AWI91197.1|5325146_5325920_+|damage-inducible-mutagenesis-protein
MPPLRSPAAPTLAELRRLTDSVGLGTGHGAGPEVVPTMPFGVAGLDAALPGGGLALGALHQIHEGGPRGRYAATAVLFAGGILARLDGPVLWCLHSRDLFAPALARVGLHPDRVVYCETWRDAEVLPAMEEGLRHRGLAGVVGELTRMALTPSRRLQLAAEGSGVTALVVHRLCAGEAVEPEPSAARTRWRVAPAPSDEIGRRMGRPRWRVELQRSRGGAPGAWIVEACDAQGRLAVPASLADRPAAPERVPRRAAG
>CP029173.1|AWI91196.1|5324342_5324750_-|response-regulator
MSDARPTDRRPVILVVEDEPDERYLAAELLEEKGFEVIEAETAERALDILRQRGDGIDVVFSDVRTPGTIGGFELARIIGVTWPRIHLLLTSGDAGDQPSDLRVTATFMPKPWRAPEILTWLEEAAGLREPPGEG
>CP029173.1|AWI91195.1|5323540_5324002_+|peptidylprolyl-isomerase
MAETNETIVLETTKGRVVIALRPDLAPNHVERIKTLASQGFYDGVPFHRVIDGFMAQTGDPTGTGSGGSELPDLNAEFNAEPHVRGTCSMARTNFPHSANSQFFICFSDARFLDRQYTVWGKVIEGMEVVDTIKRGEPVNDPDRIVKATVAAA
>CP029173.1|AWI91194.1|5323099_5323537_+|hypothetical-protein
MLAPARACAFEGIEPWHTLPQTLRGTQHVPLPAAGPEPAPADTLRALYPALAACWRVPEGVSRFERAEITARLSLRRDGSVIGTPQITFAKAPGDTRTRDILIRATLDAIARCTPVRLTPALGGAIAGRPLALRFIYDGPKGQGI
>CP029173.1|AWI91193.1|5322494_5323034_+|peptidylprolyl-isomerase
MNRRHAVLGLALSAMLLAAPARAGENTVTLETKDGRVTIELRPEIAPKHVKQLKTLIGQGFYNGLKFHRVIDGFMVQTGDPKGNGTGGSTLPNIPAEFSSAPFKRGTVGMARSGDPNSANSQFFICIGDAEFLNNNYTVVGVVTSGMDVVDKIKKGSKANNGSVQDPDKIVKMTLGGGQ
>CP029173.1|AWI91192.1|5321965_5322469_+|pantetheine-phosphate-adenylyltransferase
MTTRTALYAGSFDPVTNGHLDVVRQACRLVPRLVLAIGVHPGKAPLFSAEERAALLSETCGPLAAAEGAILEVVTFDDLAVSAARRCGARLFIRGLRDGTDLDYEMQLAGMNGAMAPEVQTVFLPASTGVRPITATLVRQIAAMGGDVSPFVPPVVAAQLAARFAKS
>CP029173.1|AWI91191.1|5319111_5321838_+|DNA-gyrase-subunit-A
MADDKDAPGAGTPPPATDIKPVSITDEMRRSYLDYAMSVIVSRALPDARDGLKPVHRRILYSAFESGHLPERKYVKSARIVGDVIGKYHPHGDQSIYDALVRMAQDFSMRLMLIDGQGNFGSVDGDPAAAMRYTESRLAKPAVALLTDIDKNTVDFRPNYDEAHEEPTVLPARFPNLLVNGAGGIAVGMATNIPPHNLGELVDACVALIDDPALTIEALNEIVPGPDFPTGGMILGRAGTRQAYTTGRGSIIMRARSHVEELRKEREALIFTEIPYQVNKATLIEKIAELVKDKRIEGISDLRDESDRDGMRIVVEIKRDAMADVVLNQLYRYTPLQTSFGANMVALNGGRPELMNLKDLLLAFNDFREEVVSRRTKFLLNKARERAHVLCGLAIAVANIDEVIRLIRTSPDPNTARELLMARDWPAHDIAPLIALVDDPRHRVADDGTYRLSETQARAILDLRLQRLTALGRDEIGDELKKLADEIADYLDILRSRARIQAIVKDELAEVRELFATPRKTEIIDSDFSVEDEDLIAREDMVVTVSHAGYVKRVPLSTYRAQKRGGKGRSGMSTRDEDFVTRLFVANTHTPVLFFSDQGQAYKEKVWRLPVAAPNARGKALVNILHLQNEGERITTIMPLPEDEASWETLDVMFATASGNVRRNKLSDFVQVNRNGKIAMKLDPGDHIVHVEICRADQNVLLTTALGQCIRFPVEDVRVFKGRDSTGVRGISLAKDDRVISMAILNAFDASPEERAGYLKMRRAVIGDAGDEGDAAEAEESTAEAAISQERYSEMGAAEQYVLTLSERGFGKRSSSYEYRTSGRGGKGITAMRVNARNGHLVASFPVEASDQIMLVTNAGQLIRVPVDDIRIVGRASQGVTVFNTDKAERVVSVEHIEGEEENGEDEA
>CP029173.1|AWI91190.1|5318195_5318795_+|molybdenum-cofactor-guanylyltransferase-MobA
MGLILAGGLSRRMGGGDKSLRRLAGRTLLERVAERFEPQCAGGLALSANGDPARFGDVFSGAILPDTIPDHPGPLAGILAGMEAAAALPGVTHVASVPGDAPFLPHDFVARLVAAAAEGKPIALAASGERRHFTSALWPVDLRHDLRDWLGRGERRVGGFIERQGAAVASWPVEPVDPFLNLNAPEDLAAAEAMLARGG
>CP029173.1|AWI91189.1|5317041_5318166_+|sodium:proton-antiporter
MAITRDDVLKTLSTVSVDDGSTTLPGSGRLSQVVIDPGNRVMFSIRIDPSEAERFESVRREAEGRVLALPGVSSVLASLTAERGSNAPAQGAAPRPPGPGVAPPRQGNALPGVRHIVAVASGKGGVGKSTTACNLALALSAQGLKVGLLDADIYGPSVPKLLGLSGKPRVIEGKTLEPLQAYGLKAMSIGLLIEPESAMIWRGPMVQSAITQMLRDVAWGELDVLVVDMPPGTGDAQLTMAQATPLSGAVIVSTPQDLALIDARRGVTMFRKVSVPILGVIENMATFVCPNCGHASAIFGHGGARHEAERLEVPFLGEIPLTMAIRETSDAGRPVVATDPDGPQAKVYREIAQKLWGNLTGAPAGRAAPKIVIE
>CP029173.1|AWI91199.1|5330720_5331797_-|choloylglycine-hydrolase
MPQTLPTRIFVSLVAFWAAFQGILEPAGACSRFVYLGQDGKIFTARSMDWAKPIGTDLYILPRGMARNGEVGPDSIRWTSKYGSLVATALGNSTSDGANEEGLTANVLWLEESQYPPFDGKGPPGLAISAWAQYALDNFATVDEAVTALEKQPFTLVTSVIPGSQIKANVHLSLSDASGDSAIIEYIDGKQVIHHGRQYQVMTNSPTYEQQLALASYWSQIGGTVMLPGTGRASDRFARAAFYVKSIPPDGDLDQLLASVYGIIRNISVPLGLSTPDKPEISSTRWRTVFDHKRRLYFFESALSPNTFWTDLNQIDFSRESGKVLKLDLGVDQANVFAGNATGAYRPSEPFPFAGLPR
>CP029173.1|AWI91200.1|5332362_5333388_+|patatin
MELTSPNRDIALVFGGGNALGAYHAGAFEVLQARGIRPDWMVGASMGAITGAIIAGNAPEERIERLHRFWNEATLHTGFSGTDLLKPRQYYNALHSLLTLAWGRPSIFTHRYPGLWSALPFMPNDVALFDHRPLLDTLRRLVDFERLNRSEMRLTIACIDVATGEEVFFDNTRQTIRPEHILASAALLPAFPPVEIDGRLLCDAGYTNNLPLDPLFEPEPARDLFGIALDLFSLQADPPRSLDAVLERANDLIFASAARRAVLGLARSYALRERLDPDGPVATLLHLVYRAGADQLASKSFDFSPSSIRDRWQAGGRDMERGLDHLAAAPLGSGRFRYTCP
>CP029173.1|AWI91201.1|5333476_5334571_-|molybdenum-ABC-transporter-ATP-binding-protein
MTIDVDVTLRRGGFALDVAFSAGAGLTALFGRSGSGKTTVIDLIAGLAHPQRGRIVADGTVLLDTARGIRVPVHRRRIGCVFQEARLMPHLSVRQNLRFGRLFSRGPGGPSLEAVADLLGIAPLLERRPAGLSGGERQRVAIGRALLARPRLLLMDEPLSALDEARKREILPYIERLRDEAGLPIVYVSHAVAEVARLASTVVVLEAGRVAASGPVDAVLRRPDLIPDGAEAGSVLAMRVERHDPATGLTRLTGPAGPLDLPLIDAAAGRRLNLRVPARDVLLALARPDGLSARNVLPGHILSMREEGTACLVEVTCGEATLAARLTRASARDLGLTVGRPVFAIVKSVALDAGGAPGSGRIEI
>CP029173.1|AWI91202.1|5334695_5335352_+|glutathione-S-transferase
MITVHHLENSRSQRVLWLLEELGLDYAVKRYTRDPATMLAPRELRAVHPLGKSPLIEIDGRVVAETGAIVECLTARADGALTPAPGTPERDRYTYFLHYAEGSAMPPLLLKLVFSRLAPGSPALLRPLVRAIAAKVTGGFVDPELRRHAAYWETELAERPYFCGAAFTAADIMMSFPLEAFAARGTGAGPRVTEWLARIHARPAYGRALERGGPYAYA
>CP029173.1|AWI91870.1|5335480_5335741_-|hypothetical-protein
MALAKIALAGSIGLISNTTANAMNHPAQTGTGGGPETTITAPHVAPTGRVMPRPRPLDSQTRGEPEQTLTPQFKDSFLMEGICVGC
>CP029173.1|AWI91203.1|5335893_5336154_-|hypothetical-protein
MPRGWIYALTLLVAVTPALLPTSAAARRTLDLQGPGDPNRTACDIVVKRPGGNPTQDMTGSIGHAKSHQSGGGRANPLICYLPGTR
>CP029173.1|AWI91871.1|5336610_5337282_-|molybdate-ABC-transporter-permease-subunit
MTALLLSLRVATGATLASLPLGLLAAWLLARRRFPGHALLDGLVHLPLILPPVVTGYLLLLAFGRRGVFGAWLAEIGIVFSFRWTGAALACAVMGFPLMVRAMRLSIEAVDRRLEQAAATLGAPPPLVFLSVTLPLSLPGILAGAVLAFAKAMGEFGATITFVSNIPGETQTLPSAIYTLTQVPGGEAGALRLTLISVAVSMLALVASEALARRMSRRIGAGR
>CP029173.1|AWI91204.1|5337405_5337648_-|hypothetical-protein
MAIDRTRRPSDPRQAAEAAFRAVTRKAPEAAPEAPRAPVIPGTRETVSLRIDRAVLEHFQKDGPGWQDRINAALKAAAGL
>CP029173.1|AWI91205.1|5337653_5337887_-|hypothetical-protein
MSDDIDAKTRAAERAERAERMAREGQQAMAEHLAAVKAVDERTVRLRALRLAKEAEEAAERAANPPAPKRGRKKATA
>CP029173.1|AWI91206.1|5338130_5338349_-|hypothetical-protein
MPVFVLRGAHRSADGQIGPPLFEEAITADNPVDAVRIANTQDLSTKDERANALWLVDAQGVLHWSLRRADRD

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP029173_1	1.1\|466681\|19\|CP029173\|CRISPRCasFinder	466681-466699	19	CP029173.1	4039594-4039612	1	0.947
CP029173_1	1.1\|466681\|19\|CP029173\|CRISPRCasFinder	466681-466699	19	CP029173.1	3733770-3733788	2	0.895
CP029173_1	1.1\|466681\|19\|CP029173\|CRISPRCasFinder	466681-466699	19	CP029173.1	5370984-5371002	2	0.895
CP029173_1	1.2\|466723\|19\|CP029173\|CRISPRCasFinder	466723-466741	19	CP029173.1	2486858-2486876	2	0.895
CP029173_14	14.1\|5330573\|31\|CP029173\|CRISPRCasFinder	5330573-5330603	31	CP029173.1	4338490-4338520	2	0.935

1. spacer 1.1|466681|19|CP029173|CRISPRCasFinder matches to position: 4039594-4039612, mismatch: 1, identity: 0.947

gccctgatcttggccctgc	CRISPR spacer
gccctgatcatggccctgc	Protospacer
********* *********

2. spacer 1.1|466681|19|CP029173|CRISPRCasFinder matches to position: 3733770-3733788, mismatch: 2, identity: 0.895

gccctgatcttggccctgc	CRISPR spacer
gccctggccttggccctgc	Protospacer
******..***********

3. spacer 1.1|466681|19|CP029173|CRISPRCasFinder matches to position: 5370984-5371002, mismatch: 2, identity: 0.895

gccctgatcttggccctgc	CRISPR spacer
gccccgatcttgcccctgc	Protospacer
****.******* ******

4. spacer 1.2|466723|19|CP029173|CRISPRCasFinder matches to position: 2486858-2486876, mismatch: 2, identity: 0.895

gagttcggcctggccctgg	CRISPR spacer
gagttcggcctgcgcctgg	Protospacer
************  *****

5. spacer 14.1|5330573|31|CP029173|CRISPRCasFinder matches to position: 4338490-4338520, mismatch: 2, identity: 0.935

ttcgggaaaagacgatgcgggaagaagagga	CRISPR spacer
ttcgggaaaagacgatgcggaaacaagagga	Protospacer
********************.** *******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	120850-120879	4	0.867
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	KT124229	Streptomyces phage Hydra, complete genome	11152-11181	4	0.867
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP022727	Erwinia persicina strain B64 plasmid pEP2, complete sequence	94508-94537	5	0.833
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP051471	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10B, complete sequence	49947-49976	5	0.833
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP030274	Rhodobacter sphaeroides 2.4.1 plasmid pB, complete sequence	71415-71444	5	0.833
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	CP047034	Rhodobacter sphaeroides strain DSM 158 plasmid pB, complete sequence	41789-41818	5	0.833
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP015291	Rhodobacter sphaeroides strain MBTLJ-20 plasmid c, complete sequence	56125-56154	5	0.833
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP047040	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pB, complete sequence	41751-41780	5	0.833
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP015215	Rhodobacter sphaeroides strain MBTLJ-13 plasmid d, complete sequence	35228-35257	5	0.833
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_LR134467	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 25, complete sequence	31849-31878	5	0.833
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP010419	Azotobacter chroococcum NCIMB 8003 plasmid pAcX50d, complete sequence	50863-50892	5	0.833
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	862516-862545	5	0.833
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP054022	Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence	770321-770351	5	0.839
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP054032	Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence	440099-440129	5	0.839
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NC_009806	Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence	67247-67276	6	0.8
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP034813	Paracoccus sp. Arc7-R13 plasmid unnamed2, complete sequence	1662-1691	6	0.8
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	944907-944936	6	0.8
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP033583	Streptomyces sp. ADI95-16 plasmid pADI95-16b, complete sequence	195381-195410	6	0.8
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP020910	Rhizobium etli strain NXC12 plasmid pRetNXC12d, complete sequence	192327-192356	6	0.8
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP020910	Rhizobium etli strain NXC12 plasmid pRetNXC12d, complete sequence	202609-202638	6	0.8
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP011667	Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence	44982-45011	6	0.8
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	639673-639702	6	0.8
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP021083	Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence	16037-16066	6	0.8
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP024423	Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence	214269-214298	6	0.8
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP020441	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence	211241-211270	6	0.8
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP021082	Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence	370149-370178	6	0.8
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP031082	Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence	134716-134745	6	0.8
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1668351-1668380	6	0.8
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	301044-301074	6	0.806
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NC_011887	Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence	365659-365689	6	0.806
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP034813	Paracoccus sp. Arc7-R13 plasmid unnamed2, complete sequence	194305-194334	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP025431	Paracoccus zhejiangensis strain J6 plasmid pPZ01, complete sequence	72283-72312	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	260085-260114	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP029453	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence	239840-239869	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP029453	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence	377114-377143	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	CP006583	Mesorhizobium huakuii 7653R plasmid pMHb, complete sequence	97146-97175	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP023069	Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence	253230-253259	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP023069	Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence	385904-385933	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP023072	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence	404979-405008	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP023072	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence	440340-440369	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP017104	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872c, complete sequence	272609-272638	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP029233	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence	255483-255512	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP029233	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence	393620-393649	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	MT657343	Microbacterium phage GaeCeo, complete genome	2359-2388	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	MN310543	Microbacterium phage ChickenKing, complete genome	2359-2388	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	100793-100822	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP023065	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence	378640-378669	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP023065	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence	412215-412244	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NC_000914	Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence	108902-108931	7	0.767
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NC_000914	Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence	140780-140809	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	486280-486309	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NC_003903	Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence	17967-17996	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NC_003903	Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence	338028-338057	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP050106	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence	279238-279267	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP048637	Rhizobium oryzihabitans strain M15 plasmid p5, complete sequence	43643-43672	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP048639	Rhizobium oryzihabitans strain M15 plasmid p7, complete sequence	54676-54705	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP025506	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence	271641-271670	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NC_023286	Streptomyces sp. F12 plasmid pFRL6, complete sequence	247947-247976	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	490176-490205	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NC_023283	Streptomyces sp. FR1 plasmid pFRL3, complete sequence	268210-268239	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP050953	Rhodococcus sp. DMU1 plasmid unnamed	323091-323120	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP050111	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence	279422-279451	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP015321	Mesorhizobium amorphae CCNWGS0123 plasmid pM0123c	4568-4597	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP030763	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence	728668-728697	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP022668	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence	159748-159777	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP045377	Sulfitobacter sp. THAF37 plasmid pTHAF37_e, complete sequence	81710-81739	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	CP040467	Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence	235641-235670	7	0.767
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP050088	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence	417280-417309	7	0.767
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	1094208-1094238	7	0.774
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	1095207-1095237	7	0.774
CP029173_10	10.3\|3081398\|31\|CP029173\|CRISPRCasFinder	3081398-3081428	31	NZ_CP049159	Caballeronia sp. SBC1 plasmid pSBC1_3, complete sequence	683646-683676	7	0.774
CP029173_10	10.3\|3081398\|31\|CP029173\|CRISPRCasFinder	3081398-3081428	31	NZ_CP049320	Caballeronia sp. SBC2 plasmid pSBC2-4, complete sequence	241710-241740	7	0.774
CP029173_10	10.3\|3081398\|31\|CP029173\|CRISPRCasFinder	3081398-3081428	31	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	1764773-1764803	7	0.774
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	586759-586789	7	0.774
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	297487-297517	7	0.774
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	298186-298216	7	0.774
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	290285-290315	7	0.774
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	356778-356808	7	0.774
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	827202-827232	7	0.774
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	215088-215118	7	0.774
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	1073042-1073072	7	0.774
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1181048-1181078	7	0.774
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	170921-170951	7	0.774
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1059333-1059363	7	0.774
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	183153-183183	7	0.774
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1443109-1443139	7	0.774
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP014802	Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence	137116-137146	7	0.774
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP014802	Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence	17124-17154	7	0.774
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	201017-201047	7	0.774
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP013381	Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence	32217-32247	7	0.774
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP009547	Burkholderia sp. 2002721687 plasmid pBTU, complete sequence	85642-85672	7	0.774
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	968816-968845	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP032687	Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence	285717-285746	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP019938	Ketogulonicigenium robustum strain SPU_B003 plasmid unnamed1, complete sequence	146270-146299	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP013109	Sinorhizobium americanum strain CFNEI 73 plasmid B, complete sequence	149310-149339	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NC_012858	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence	575845-575874	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NC_020061	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b, complete sequence	285614-285643	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	1636136-1636165	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_LN997849	Magnetospirillum sp. XM-1 isolate XM1 plasmid II, complete sequence	149834-149863	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP013053	Sinorhizobium americanum CCGM7 plasmid B, complete sequence	182431-182460	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP020810	Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed1, complete sequence	73286-73315	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP024313	Rhizobium sp. NXC24 plasmid pRspNXC24b, complete sequence	212960-212989	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	CP042595	Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence	64883-64912	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP053207	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence	327836-327865	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP050082	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence	16924-16953	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP032692	Rhizobium sp. CCGE532 plasmid pRCCGE532b, complete sequence	302171-302200	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP049732	Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence	15878-15907	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	580959-580988	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP028919	Gemmobacter sp. HYN0069 plasmid unnamed1, complete sequence	49636-49665	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP030829	Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence	19308-19337	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NZ_CP053208	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence	15876-15905	8	0.733
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	MH744420	Streptomyces phage Kromp, complete genome	2350-2379	8	0.733
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP032827	Sphingomonas sp. YZ-8 plasmid unnamed2, complete sequence	103931-103960	8	0.733
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP013381	Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence	226536-226565	8	0.733
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP009547	Burkholderia sp. 2002721687 plasmid pBTU, complete sequence	196437-196466	8	0.733
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	KX557279	Gordonia phage Hedwig, complete genome	36352-36381	8	0.733
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP028969	Aminobacter sp. MSH1 plasmid pUSP1, complete sequence	77884-77913	8	0.733
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP026266	Aminobacter sp. MSH1 plasmid pAM01, complete sequence	75184-75213	8	0.733
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	633811-633840	8	0.733
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	208150-208179	8	0.733
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP042998	Aquisphaera giovannonii strain OJF2 plasmid pOJF2_1, complete sequence	74466-74495	8	0.733
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	KC292021	Halovirus HRTV-7, complete genome	22751-22780	8	0.733
CP029173_10	10.1\|3081290\|31\|CP029173\|CRISPRCasFinder	3081290-3081320	31	NZ_CP025014	Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence	284282-284312	8	0.742
CP029173_10	10.1\|3081290\|31\|CP029173\|CRISPRCasFinder	3081290-3081320	31	NZ_CP025508	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence	385124-385154	8	0.742
CP029173_10	10.1\|3081290\|31\|CP029173\|CRISPRCasFinder	3081290-3081320	31	NZ_CP054029	Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence	101338-101368	8	0.742
CP029173_10	10.1\|3081290\|31\|CP029173\|CRISPRCasFinder	3081290-3081320	31	NZ_CP050087	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence	385111-385141	8	0.742
CP029173_10	10.1\|3081290\|31\|CP029173\|CRISPRCasFinder	3081290-3081320	31	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	184231-184261	8	0.742
CP029173_10	10.1\|3081290\|31\|CP029173\|CRISPRCasFinder	3081290-3081320	31	NZ_CP022667	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence	252523-252553	8	0.742
CP029173_10	10.1\|3081290\|31\|CP029173\|CRISPRCasFinder	3081290-3081320	31	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	141291-141321	8	0.742
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NZ_KY362366	Pseudomonas amygdali pv. tabaci strain 0893-29 plasmid pPt0893-29, complete sequence	56668-56698	8	0.742
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NZ_CP026557	Pseudomonas amygdali pv. morsprunorum strain R15244 plasmid p1_tig4, complete sequence	28157-28187	8	0.742
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NZ_CP019873	Pseudomonas syringae pv. tomato strain B13-200 plasmid pB13-200B, complete sequence	74316-74346	8	0.742
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NZ_CP019874	Pseudomonas syringae pv. tomato strain B13-200 plasmid pB13-200C, complete sequence	5960-5990	8	0.742
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NZ_LT222313	Pseudomonas cerasi isolate Sour cherry (Prunus cerasus) symptomatic leaf plasmid p58T1, complete sequence	4322-4352	8	0.742
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NZ_LT222316	Pseudomonas cerasi isolate Sour cherry (Prunus cerasus) symptomatic leaf plasmid p58T4	30673-30703	8	0.742
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NZ_LT963404	Pseudomonas syringae pv. avii isolate CFBP3846 plasmid PP2, complete sequence	69635-69665	8	0.742
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NZ_CP024714	Pseudomonas syringae pv. actinidiae strain MAFF212063 plasmid pMAFF212063-B, complete sequence	44718-44748	8	0.742
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NZ_LT963398	Pseudomonas cerasi isolate PL963 plasmid PP3, complete sequence	41185-41215	8	0.742
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NC_004633	Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000A, complete sequence	56471-56501	8	0.742
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NC_004632	Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B, complete sequence	52086-52116	8	0.742
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	LT985195	Pseudomonas syringae strain CFBP 2116 genome assembly, plasmid: PP4	9665-9695	8	0.742
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NZ_LT963411	Pseudomonas syringae isolate CFBP3840 plasmid PP2, complete sequence	74292-74322	8	0.742
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NZ_LT963412	Pseudomonas syringae isolate CFBP3840 plasmid PP3, complete sequence	25618-25648	8	0.742
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NZ_CP026563	Pseudomonas avellanae strain R2leaf plasmid p1_tig4, complete sequence	33526-33556	8	0.742
CP029173_10	10.3\|3081398\|31\|CP029173\|CRISPRCasFinder	3081398-3081428	31	NZ_CP039697	Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence	324498-324528	8	0.742
CP029173_10	10.3\|3081398\|31\|CP029173\|CRISPRCasFinder	3081398-3081428	31	AJ972879	Yersinia phage phiR1-37 complete genome	39301-39331	8	0.742
CP029173_10	10.3\|3081398\|31\|CP029173\|CRISPRCasFinder	3081398-3081428	31	NC_016163	Yersinia phage phiR1-37, complete genome	39301-39331	8	0.742
CP029173_10	10.3\|3081398\|31\|CP029173\|CRISPRCasFinder	3081398-3081428	31	NZ_AP022333	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence	297240-297270	8	0.742
CP029173_10	10.3\|3081398\|31\|CP029173\|CRISPRCasFinder	3081398-3081428	31	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	13890-13920	8	0.742
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	326409-326439	8	0.742
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	526915-526945	8	0.742
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	1596947-1596977	8	0.742
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NZ_CP022565	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence	173257-173287	8	0.742
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	220837-220867	8	0.742
CP029173_10	10.4\|3081452\|31\|CP029173\|CRISPRCasFinder	3081452-3081482	31	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	535418-535448	8	0.742
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP007798	Azospirillum brasilense strain Az39 plasmid AbAZ39_p5, complete sequence	3465-3495	8	0.742
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP014802	Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence	12291-12321	8	0.742
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP014802	Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence	16827-16857	8	0.742
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP014802	Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence	17421-17451	8	0.742
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP014802	Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence	861-891	8	0.742
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP014802	Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence	1158-1188	8	0.742
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	590137-590167	8	0.742
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	757901-757931	8	0.742
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP032327	Azospirillum brasilense strain MTCC4035 plasmid p6, complete sequence	64661-64691	8	0.742
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP006989	Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence	150898-150928	8	0.742
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP021126	Rhizobium sp. Kim5 plasmid pRetKim5b, complete sequence	168586-168616	8	0.742
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NC_010998	Rhizobium etli CIAT 652 plasmid pA, complete sequence	155146-155176	8	0.742
CP029173_7	7.1\|2855703\|30\|CP029173\|CRISPRCasFinder	2855703-2855732	30	NC_021289	Burkholderia insecticola plasmid p1, complete sequence	985512-985541	9	0.7
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	343491-343520	9	0.7
CP029173_9	9.1\|2856072\|30\|CP029173\|CRISPRCasFinder	2856072-2856101	30	NZ_CP021813	Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence	60503-60532	9	0.7
CP029173_10	10.1\|3081290\|31\|CP029173\|CRISPRCasFinder	3081290-3081320	31	NZ_CP053441	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence	272000-272030	9	0.71
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NC_010625	Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence	1281215-1281245	9	0.71
CP029173_10	10.2\|3081344\|31\|CP029173\|CRISPRCasFinder	3081344-3081374	31	NZ_CP054609	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence	470779-470809	9	0.71
CP029173_11	11.1\|3081614\|31\|CP029173\|CRISPRCasFinder	3081614-3081644	31	NZ_CP024940	Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence	69595-69625	9	0.71
CP029173_10	10.1\|3081290\|31\|CP029173\|CRISPRCasFinder	3081290-3081320	31	NZ_CP016458	Blastomonas sp. RAC04 plasmid pBSY18_2, complete sequence	74002-74032	10	0.677

1. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 4, identity: 0.867

gctcgggcggcgacctcatcgcggccggca-	CRISPR spacer
gctcgggcgacgacctcagcgcgg-cggcgc	Protospacer
*********.******** ***** ****.

2. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to KT124229 (Streptomyces phage Hydra, complete genome) position: , mismatch: 4, identity: 0.867

-gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
cgctc-ggcggcgacatcatcgcgaccggcg	Protospacer
 **** ********* ********.*****.

3. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP022727 (Erwinia persicina strain B64 plasmid pEP2, complete sequence) position: , mismatch: 5, identity: 0.833

-gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
tgcg-caaccgcgacggcatcaccatcggca	Protospacer
 *** *..****************** ***.

4. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP051471 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10B, complete sequence) position: , mismatch: 5, identity: 0.833

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
cctggggcggcgacatcatcgcggccgcct	Protospacer
 ** ********** ************ *

5. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP030274 (Rhodobacter sphaeroides 2.4.1 plasmid pB, complete sequence) position: , mismatch: 5, identity: 0.833

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
cctggggcggcgacatcatcgcggccgcct	Protospacer
 ** ********** ************ *

6. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to CP047034 (Rhodobacter sphaeroides strain DSM 158 plasmid pB, complete sequence) position: , mismatch: 5, identity: 0.833

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
cctggggcggcgacatcatcgcggccgcct	Protospacer
 ** ********** ************ *

7. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP015291 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid c, complete sequence) position: , mismatch: 5, identity: 0.833

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
cctggggcggcgacatcatcgcggccgcct	Protospacer
 ** ********** ************ *

8. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP047040 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pB, complete sequence) position: , mismatch: 5, identity: 0.833

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
cctggggcggcgacatcatcgcggccgcct	Protospacer
 ** ********** ************ *

9. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP015215 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid d, complete sequence) position: , mismatch: 5, identity: 0.833

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
cctggggcggcgacatcatcgcggccgcct	Protospacer
 ** ********** ************ *

10. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_LR134467 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 25, complete sequence) position: , mismatch: 5, identity: 0.833

gctcgggcggcgacctcatcgcggc-cggca	CRISPR spacer
cctcgggcggcggcctcaacgcggcgtggc-	Protospacer
 ***********.***** ****** .***

11. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP010419 (Azotobacter chroococcum NCIMB 8003 plasmid pAcX50d, complete sequence) position: , mismatch: 5, identity: 0.833

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
gccagggcggcgacctcaacccggccggga	Protospacer
**. ************** * ******* *

12. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

gctcgggcggcgacctcatcgcggc-cggca	CRISPR spacer
gccagggcggcgacctcctcgcggcgcagc-	Protospacer
**. ************* ******* *.**

13. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP054022 (Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence) position: , mismatch: 5, identity: 0.839

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
gaggccggcaacgacatggtcttcggcggcg	Protospacer
.* ************.************.*

14. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 5, identity: 0.839

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
gaggccggcaacgacatggtcttcggcggcg	Protospacer
.* ************.************.*

15. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NC_009806 (Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence) position: , mismatch: 6, identity: 0.8

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
ccgccgcccgcgacggcatcaccatcaagg	Protospacer
 ***** ****************** .. *

16. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP034813 (Paracoccus sp. Arc7-R13 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

gcgccgg-ccgcgacggcatcaccatgggcg	CRISPR spacer
-cgatgatccgcgaccgcatgaccatgggcg	Protospacer
 ** .*. ******* **** **********

17. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 6, identity: 0.8

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
tgggcggccgcgtcggcgtcaccatgggca	Protospacer
  * ******** ****.***********.

18. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP033583 (Streptomyces sp. ADI95-16 plasmid pADI95-16b, complete sequence) position: , mismatch: 6, identity: 0.8

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
acaccacccgcgacggcatcaccgtcggcg	Protospacer
.*.**. ****************.* ****

19. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP020910 (Rhizobium etli strain NXC12 plasmid pRetNXC12d, complete sequence) position: , mismatch: 6, identity: 0.8

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcctcgcccgcgacggcatgaccatggtct	Protospacer
** .** ************ ******* *

20. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP020910 (Rhizobium etli strain NXC12 plasmid pRetNXC12d, complete sequence) position: , mismatch: 6, identity: 0.8

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcctcgcccgcgacggcatgaccatggtct	Protospacer
** .** ************ ******* *

21. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP011667 (Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence) position: , mismatch: 6, identity: 0.8

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
acaccacccgcgacggcatcaccgtcggcg	Protospacer
.*.**. ****************.* ****

22. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.8

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
tgaccggcggcgaactcctcgcggccggca	Protospacer
   * ******** *** ************

23. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 6, identity: 0.8

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
gggtgcccggcgacctcatcgcggcccgca	Protospacer
*  .*  ******************* ***

24. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP024423 (Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence) position: , mismatch: 6, identity: 0.8

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
actggggcggcgacatcatcgcggcggcct	Protospacer
.** ********** ********** * *

25. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP020441 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
actggggcggcgacatcatcgcggcggcct	Protospacer
.** ********** ********** * *

26. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 6, identity: 0.8

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
ggctgcgcgacgacctcagcgcggccggca	Protospacer
* ..* ***.******** ***********

27. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP031082 (Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence) position: , mismatch: 6, identity: 0.8

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
actggggcggcgacatcatcgcggcggcct	Protospacer
.** ********** ********** * *

28. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

---gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
tgcgccc---cggcgacctcgtcgtggccggca	Protospacer
   **.*   **********.***.********

29. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 6, identity: 0.806

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
ggcgacggcaacgacgtcctggtcggcgatg	Protospacer
**.  *** ****** ************* *

30. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NC_011887 (Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence) position: , mismatch: 6, identity: 0.806

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
gatgccggcaacgacctgctcttcggcgatg	Protospacer
.*.************ ** **********.

31. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP034813 (Paracoccus sp. Arc7-R13 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
ggatgttccgcgacggcatcaccatcggcg	Protospacer
* ..   ****************** ****

32. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP025431 (Paracoccus zhejiangensis strain J6 plasmid pPZ01, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
ggcccggccgcgacggcaccaacatgatca	Protospacer
*  ***************.** ****. *.

33. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
tcgccggccgcgacggcacccccagccggg	Protospacer
 *****************.* ***   * *

34. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP029453 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctcgatca	Protospacer
************.** ******* .*. *.

35. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP029453 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctcgatca	Protospacer
************.** ******* .*. *.

36. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to CP006583 (Mesorhizobium huakuii 7653R plasmid pMHb, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctcgatca	Protospacer
************.** ******* .*. *.

37. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP023069 (Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctcgatca	Protospacer
************.** ******* .*. *.

38. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP023069 (Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctcgatca	Protospacer
************.** ******* .*. *.

39. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP023072 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctcgatca	Protospacer
************.** ******* .*. *.

40. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP023072 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctcgatca	Protospacer
************.** ******* .*. *.

41. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP017104 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872c, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctcgatca	Protospacer
************.** ******* .*. *.

42. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP029233 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctcgatca	Protospacer
************.** ******* .*. *.

43. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP029233 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctcgatca	Protospacer
************.** ******* .*. *.

44. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to MT657343 (Microbacterium phage GaeCeo, complete genome) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcacca---tgggcg	CRISPR spacer
tcgccgacagcgacggcatcaccaacctgt---	Protospacer
 *****.* ***************   **

45. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to MN310543 (Microbacterium phage ChickenKing, complete genome) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcacca---tgggcg	CRISPR spacer
tcgccgacagcgacggcatcaccaacctgt---	Protospacer
 *****.* ***************   **

46. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcgacggccgcacccgtaccg	Protospacer
*****************  ****   . **

47. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP023065 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctcgatca	Protospacer
************.** ******* .*. *.

48. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP023065 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctcgatca	Protospacer
************.** ******* .*. *.

49. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NC_000914 (Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctcgatca	Protospacer
************.** ******* .*. *.

50. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NC_000914 (Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence) position: , mismatch: 7, identity: 0.767

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctcgatca	Protospacer
************.** ******* .*. *.

51. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 7, identity: 0.767

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
taccaggcggcgacctcgtcgcggccgtcg	Protospacer
  .*.************.********* *.

52. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NC_003903 (Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence) position: , mismatch: 7, identity: 0.767

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
aggccggcggcgacctcgtcgcggctggct	Protospacer
.  * ************.*******.***

53. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NC_003903 (Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence) position: , mismatch: 7, identity: 0.767

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
aggccggcggcgacctcgtcgcggctggct	Protospacer
.  * ************.*******.***

54. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP050106 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence) position: , mismatch: 7, identity: 0.767

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
acggcgtcggcgaccgcatcgctgccggca	Protospacer
.*   * ******** ****** *******

55. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP048637 (Rhizobium oryzihabitans strain M15 plasmid p5, complete sequence) position: , mismatch: 7, identity: 0.767

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
tgtggggcggcgacatcatcacggccgcga	Protospacer
  * ********** *****.******  *

56. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP048639 (Rhizobium oryzihabitans strain M15 plasmid p7, complete sequence) position: , mismatch: 7, identity: 0.767

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
tgtggggcggcgacatcatcacggccgcga	Protospacer
  * ********** *****.******  *

57. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP025506 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence) position: , mismatch: 7, identity: 0.767

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
acggcgtcggcgaccgcatcgctgccggca	Protospacer
.*   * ******** ****** *******

58. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NC_023286 (Streptomyces sp. F12 plasmid pFRL6, complete sequence) position: , mismatch: 7, identity: 0.767

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
ccctggacggtgacctcatcgcggccgccg	Protospacer
 *..**.***.**************** *.

59. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 7, identity: 0.767

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
gctcgcgcggcgacgtcatcgcgctggccg	Protospacer
***** ******** ******** . * *.

60. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NC_023283 (Streptomyces sp. FR1 plasmid pFRL3, complete sequence) position: , mismatch: 7, identity: 0.767

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
ccctggacggtgacctcatcgcggccgccg	Protospacer
 *..**.***.**************** *.

61. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP050953 (Rhodococcus sp. DMU1 plasmid unnamed) position: , mismatch: 7, identity: 0.767

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
gggtgtgcgacgacctcaccgcggccggcc	Protospacer
*  .* ***.********.**********

62. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP050111 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence) position: , mismatch: 7, identity: 0.767

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
acggcgtcggcgaccgcatcgctgccggca	Protospacer
.*   * ******** ****** *******

63. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP015321 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123c) position: , mismatch: 7, identity: 0.767

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
gtgtcgccggcgacgtcatcgcggccgaca	Protospacer
*. . * ******* ************.**

64. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP030763 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
acggcgtcggcgaccgcatcgctgccggca	Protospacer
.*   * ******** ****** *******

65. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP022668 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence) position: , mismatch: 7, identity: 0.767

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
acggcgtcggcgaccgcatcgctgccggca	Protospacer
.*   * ******** ****** *******

66. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP045377 (Sulfitobacter sp. THAF37 plasmid pTHAF37_e, complete sequence) position: , mismatch: 7, identity: 0.767

gctcggg---cggcgacctcatcgcggccggca	CRISPR spacer
---tggaacccggcgacatcatcgcgaccggca	Protospacer
   .**.   ******* ********.******

67. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
ccccgctcggcgacctcatcgaggccggag	Protospacer
 *.**  ************** ****** .

68. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP050088 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence) position: , mismatch: 7, identity: 0.767

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
acggcgtcggcgaccgcatcgctgccggca	Protospacer
.*   * ******** ****** *******

69. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 7, identity: 0.774

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
cgcgaccgcttcgttcaaatcatcgccgagt	Protospacer
 *.* * ****** *********** ****

70. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 7, identity: 0.774

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
cgcgaccgcttcgttcaaatcatcgccgagt	Protospacer
 *.* * ****** *********** ****

71. spacer 10.3|3081398|31|CP029173|CRISPRCasFinder matches to NZ_CP049159 (Caballeronia sp. SBC1 plasmid pSBC1_3, complete sequence) position: , mismatch: 7, identity: 0.774

caggatggcgacgattacgcggccggcaatc	CRISPR spacer
gatcacgacgacgattccgcggccggaaatc	Protospacer
 *  *.*.******** ********* ****

72. spacer 10.3|3081398|31|CP029173|CRISPRCasFinder matches to NZ_CP049320 (Caballeronia sp. SBC2 plasmid pSBC2-4, complete sequence) position: , mismatch: 7, identity: 0.774

caggatggcgacgattacgcggccggcaatc	CRISPR spacer
gatcacgacgacgattccgcggccggaaatc	Protospacer
 *  *.*.******** ********* ****

73. spacer 10.3|3081398|31|CP029173|CRISPRCasFinder matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 7, identity: 0.774

caggatggcgacgattacgcggccggcaatc	CRISPR spacer
gtggatggcgccggttacgcggccgagaagc	Protospacer
  ******** **.***********. ** *

74. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 7, identity: 0.774

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
cccggcggaaccgtcttcctggtcggcgagg	Protospacer
  .  ***** ** *****************

75. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.774

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
ggggaaggcaacgacttcctgatcggcgacg	Protospacer
**    ** ************.******* *

76. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.774

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
ggggagggcaacgacttcctgatcggcgacg	Protospacer
**    ** ************.******* *

77. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.774

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
ggggaaggcaacgacttcctgatcggcgacg	Protospacer
**    ** ************.******* *

78. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 7, identity: 0.774

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
ggggagggcaacgacttcctgatcggcgacg	Protospacer
**    ** ************.******* *

79. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.774

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
ggggagggcaacgacttcctgatcggcgacg	Protospacer
**    ** ************.******* *

80. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.774

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
ggggagggcaacgacttcctgatcggcgacg	Protospacer
**    ** ************.******* *

81. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.774

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
ggggagggcaacgacttcctgatcggcgacg	Protospacer
**    ** ************.******* *

82. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.774

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
gggtcgggcaacgacttcctgatcggcgacg	Protospacer
** .. ** ************.******* *

83. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 7, identity: 0.774

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
ggggagggcaacgacttcctgatcggcgacg	Protospacer
**    ** ************.******* *

84. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 7, identity: 0.774

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
ggggagggcaacgacttcctgatcggcgacg	Protospacer
**    ** ************.******* *

85. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 7, identity: 0.774

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
ggtgccggcaacgacgtgctcttcgccggcg	Protospacer
...*************** ****** **.*

86. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.774

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
tccgccggcatcgacgtgatcttcggcaagc	Protospacer
  ******** *******.********.* .

87. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP014802 (Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence) position: , mismatch: 7, identity: 0.774

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
cgggccggcaacgacgtggtctacggtggca	Protospacer
 . ******************* ***.*.*

88. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP014802 (Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence) position: , mismatch: 7, identity: 0.774

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
ggcaccggcaacgacgaggtcatcggcggca	Protospacer
..*.************ **** ******.*

89. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

aacgccgg--caacgacgtggtcttcggcgact	CRISPR spacer
--ggacagttcaaggacgtggtcttcggcgaca	Protospacer
   * *.*  *** ******************

90. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP013381 (Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence) position: , mismatch: 7, identity: 0.774

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
cacgccggcagctacgtggtcttccacatct	Protospacer
 *********.* *********** .*. **

91. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP009547 (Burkholderia sp. 2002721687 plasmid pBTU, complete sequence) position: , mismatch: 7, identity: 0.774

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
cacgccggcagctacgtggtcttccacatct	Protospacer
 *********.* *********** .*. **

92. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
aggccggtcgcgacggcatcaccagctccc	Protospacer
. *****.****************    *

93. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP032687 (Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctccatca	Protospacer
************.** ******* . . *.

94. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP019938 (Ketogulonicigenium robustum strain SPU_B003 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gggccgtccgcgacggtatcaccatctcga	Protospacer
* **** *********.********    .

95. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP013109 (Sinorhizobium americanum strain CFNEI 73 plasmid B, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctctatca	Protospacer
************.** ******* . . *.

96. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NC_012858 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
cggccggcggcgacggcttcaccatcgagc	Protospacer
  ****** ******** ******* *.

97. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NC_020061 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctccatca	Protospacer
************.** ******* . . *.

98. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
cggccggcggcgacggcttcaccatcgagc	Protospacer
  ****** ******** ******* *.

99. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_LN997849 (Magnetospirillum sp. XM-1 isolate XM1 plasmid II, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
aactggcccgctacggcatcaccatcggcg	Protospacer
.  . * **** ************* ****

100. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP013053 (Sinorhizobium americanum CCGM7 plasmid B, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctctatca	Protospacer
************.** ******* . . *.

101. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP020810 (Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcggcggccgcggcggcatcaccgcgatac	Protospacer
*** ********.**********..*.

102. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP024313 (Rhizobium sp. NXC24 plasmid pRspNXC24b, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctccatca	Protospacer
************.** ******* . . *.

103. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to CP042595 (Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
tggccggccgcgacagcatcaccgaggtgc	Protospacer
  ************.********. **

104. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP053207 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
cggccgggcgcaacggcatcaccatcccgg	Protospacer
  ***** ***.*************    *

105. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP050082 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
cggccggcggcgacggcttcaccatcgagc	Protospacer
  ****** ******** ******* *.

106. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP032692 (Rhizobium sp. CCGE532 plasmid pRCCGE532b, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
gcgccggccgcggcgtcatcacctccatca	Protospacer
************.** ******* . . *.

107. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP049732 (Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
cggccggcggcgacggcttcaccatcgagc	Protospacer
  ****** ******** ******* *.

108. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
cggccggcggcgacggcttcaccatcgagc	Protospacer
  ****** ******** ******* *.

109. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP028919 (Gemmobacter sp. HYN0069 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
tttccggccgcgacggcagcacgatgcaag	Protospacer
 . *************** *** *** . *

110. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP030829 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
ctcccggccgcgacatcatcaccatgcggc	Protospacer
 . ***********. ********** *

111. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NZ_CP053208 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
cggccggcggcgacggcttcaccatcgagc	Protospacer
  ****** ******** ******* *.

112. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to MH744420 (Streptomyces phage Kromp, complete genome) position: , mismatch: 8, identity: 0.733

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
aggccggccgcgacggcgtcacccgccgct	Protospacer
. ***************.*****    **

113. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP032827 (Sphingomonas sp. YZ-8 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
agcgcagcggcgatctcatcgcggccagca	Protospacer
. .  .*******.************.***

114. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP013381 (Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence) position: , mismatch: 8, identity: 0.733

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
gacaggacggcgacctcgtcgcggccgtgc	Protospacer
* . **.**********.*********

115. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP009547 (Burkholderia sp. 2002721687 plasmid pBTU, complete sequence) position: , mismatch: 8, identity: 0.733

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
gacaggacggcgacctcgtcgcggccgtgc	Protospacer
* . **.**********.*********

116. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to KX557279 (Gordonia phage Hedwig, complete genome) position: , mismatch: 8, identity: 0.733

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
agctcggcggcgatctcatcgcggcgggct	Protospacer
. .. ********.*********** ***

117. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP028969 (Aminobacter sp. MSH1 plasmid pUSP1, complete sequence) position: , mismatch: 8, identity: 0.733

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
ccattcgcggcgacctcatcgtggccgcaa	Protospacer
 * .  ***************.*****  *

118. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP026266 (Aminobacter sp. MSH1 plasmid pAM01, complete sequence) position: , mismatch: 8, identity: 0.733

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
ccattcgcggcgacctcatcgtggccgcaa	Protospacer
 * .  ***************.*****  *

119. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 8, identity: 0.733

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
acaaggccggcgacctcatcgcggcggaag	Protospacer
.*  ** ****************** *. .

120. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 8, identity: 0.733

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
atccgggcggcgaccccatcgcggtctccg	Protospacer
...************.********.*  *.

121. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP042998 (Aquisphaera giovannonii strain OJF2 plasmid pOJF2_1, complete sequence) position: , mismatch: 8, identity: 0.733

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
tcatcctcgacaacctcatcgcggccggca	Protospacer
 * .   **.*.******************

122. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to KC292021 (Halovirus HRTV-7, complete genome) position: , mismatch: 8, identity: 0.733

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
aaatcgtcggcgacctcaccgcggcgggca	Protospacer
.  . * ***********.****** ****

123. spacer 10.1|3081290|31|CP029173|CRISPRCasFinder matches to NZ_CP025014 (Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccgacctcgattacattgccggagggc	CRISPR spacer
gctgccgacctcgatcagattgccgagcagg	Protospacer
* *************.* *******.. .*

124. spacer 10.1|3081290|31|CP029173|CRISPRCasFinder matches to NZ_CP025508 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccgacctcgattacattgccggagggc	CRISPR spacer
gctgccgacctcgatcagattgccgagcagg	Protospacer
* *************.* *******.. .*

125. spacer 10.1|3081290|31|CP029173|CRISPRCasFinder matches to NZ_CP054029 (Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccgacctcgattacattgccggagggc	CRISPR spacer
gctgccgacctcgatcagattgccgagcagg	Protospacer
* *************.* *******.. .*

126. spacer 10.1|3081290|31|CP029173|CRISPRCasFinder matches to NZ_CP050087 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccgacctcgattacattgccggagggc	CRISPR spacer
gctgccgacctcgatcagattgccgagcagg	Protospacer
* *************.* *******.. .*

127. spacer 10.1|3081290|31|CP029173|CRISPRCasFinder matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccgacctcgattacattgccggagggc	CRISPR spacer
gctgccgacctcgatcaaattgccgagcaga	Protospacer
* *************.* *******.. .*

128. spacer 10.1|3081290|31|CP029173|CRISPRCasFinder matches to NZ_CP022667 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccgacctcgattacattgccggagggc	CRISPR spacer
gctgccgacctcgatcagattgccgagcagg	Protospacer
* *************.* *******.. .*

129. spacer 10.1|3081290|31|CP029173|CRISPRCasFinder matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccgacctcgattacattgccggagggc	CRISPR spacer
gctgccgacctcgatcaaattgccgagcagg	Protospacer
* *************.* *******.. .*

130. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NZ_KY362366 (Pseudomonas amygdali pv. tabaci strain 0893-29 plasmid pPt0893-29, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
ctggccggcctcgatcaaatgatcggtgctg	Protospacer
   ******.********** *****.*  *

131. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NZ_CP026557 (Pseudomonas amygdali pv. morsprunorum strain R15244 plasmid p1_tig4, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
ctggccggcctcgatcaaatgatcggtgctg	Protospacer
   ******.********** *****.*  *

132. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NZ_CP019873 (Pseudomonas syringae pv. tomato strain B13-200 plasmid pB13-200B, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
ctggccggcctcgatcaaatgatcggtgctg	Protospacer
   ******.********** *****.*  *

133. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NZ_CP019874 (Pseudomonas syringae pv. tomato strain B13-200 plasmid pB13-200C, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
ctggccggcctcgatcaaatgatcggtgctg	Protospacer
   ******.********** *****.*  *

134. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NZ_LT222313 (Pseudomonas cerasi isolate Sour cherry (Prunus cerasus) symptomatic leaf plasmid p58T1, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
ctggccggcctcgatcaaatgatcggtgctg	Protospacer
   ******.********** *****.*  *

135. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NZ_LT222316 (Pseudomonas cerasi isolate Sour cherry (Prunus cerasus) symptomatic leaf plasmid p58T4) position: , mismatch: 8, identity: 0.742

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
ctggccggcctcgatcaaatgatcggtgctg	Protospacer
   ******.********** *****.*  *

136. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NZ_LT963404 (Pseudomonas syringae pv. avii isolate CFBP3846 plasmid PP2, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
ctggccggcctcgatcaaatgatcggtgctg	Protospacer
   ******.********** *****.*  *

137. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NZ_CP024714 (Pseudomonas syringae pv. actinidiae strain MAFF212063 plasmid pMAFF212063-B, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
ctggccggcctcgatcaaatgatcggtgctg	Protospacer
   ******.********** *****.*  *

138. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NZ_LT963398 (Pseudomonas cerasi isolate PL963 plasmid PP3, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
ctggccggcctcgatcaaatgatcggtgctg	Protospacer
   ******.********** *****.*  *

139. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NC_004633 (Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000A, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
ctggccggcctcgatcaaatgatcggtgctg	Protospacer
   ******.********** *****.*  *

140. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NC_004632 (Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
ctggccggcctcgatcaaatgatcggtgctg	Protospacer
   ******.********** *****.*  *

141. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to LT985195 (Pseudomonas syringae strain CFBP 2116 genome assembly, plasmid: PP4) position: , mismatch: 8, identity: 0.742

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
ctggccggcctcgatcaaatgatcggtgctg	Protospacer
   ******.********** *****.*  *

142. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NZ_LT963411 (Pseudomonas syringae isolate CFBP3840 plasmid PP2, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
ctggccggcctcgatcaaatgatcggtgctg	Protospacer
   ******.********** *****.*  *

143. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NZ_LT963412 (Pseudomonas syringae isolate CFBP3840 plasmid PP3, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
ctggccggcctcgatcaaatgatcggtgctg	Protospacer
   ******.********** *****.*  *

144. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NZ_CP026563 (Pseudomonas avellanae strain R2leaf plasmid p1_tig4, complete sequence) position: , mismatch: 8, identity: 0.742

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
ctggccggcctcgatcaaatgatcggtgctg	Protospacer
   ******.********** *****.*  *

145. spacer 10.3|3081398|31|CP029173|CRISPRCasFinder matches to NZ_CP039697 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence) position: , mismatch: 8, identity: 0.742

caggatggcgacgattacgcggccggcaatc	CRISPR spacer
tcgattttcgactattacgcggcccgcaatc	Protospacer
. *. *  **** *********** ******

146. spacer 10.3|3081398|31|CP029173|CRISPRCasFinder matches to AJ972879 (Yersinia phage phiR1-37 complete genome) position: , mismatch: 8, identity: 0.742

caggatggcgacgattacgcggccggcaatc	CRISPR spacer
tctgatggcgacgatgacgctgccggagata	Protospacer
.  ************ **** ***** .**

147. spacer 10.3|3081398|31|CP029173|CRISPRCasFinder matches to NC_016163 (Yersinia phage phiR1-37, complete genome) position: , mismatch: 8, identity: 0.742

caggatggcgacgattacgcggccggcaatc	CRISPR spacer
tctgatggcgacgatgacgctgccggagata	Protospacer
.  ************ **** ***** .**

148. spacer 10.3|3081398|31|CP029173|CRISPRCasFinder matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 8, identity: 0.742

caggatggcgacgattacgcggccggcaatc	CRISPR spacer
ggcgagctcgacgattacgcggacgggaatc	Protospacer
 . **   ************** *** ****

149. spacer 10.3|3081398|31|CP029173|CRISPRCasFinder matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 8, identity: 0.742

caggatggcgacgattacgcggccggcaatc	CRISPR spacer
ctgcatggcgacgatcacgcggcgggcgccg	Protospacer
* * ***********.******* ***. .

150. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.742

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
aacggtggcaacgacttcctggacggcgagg	Protospacer
...  .** ************* ********

151. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 8, identity: 0.742

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
gccgtcggcgacgacttcctggtcggcatgc	Protospacer
* . **** .*****************. *

152. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.742

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
gcggtcggcgacgacttcctggtcggcatgc	Protospacer
*   **** .*****************. *

153. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 8, identity: 0.742

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
ggcatctggaacgacttcctggtcggcctca	Protospacer
**. ** *.******************   .

154. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.742

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
gcggtcggcgacgacttcctggtcggcatgc	Protospacer
*   **** .*****************. *

155. spacer 10.4|3081452|31|CP029173|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 8, identity: 0.742

ggtctcggaaacgacttcctggtcggcgagg	CRISPR spacer
gcggtcggcgacgacttcctggtcggcatgc	Protospacer
*   **** .*****************. *

156. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP007798 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p5, complete sequence) position: , mismatch: 8, identity: 0.742

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
ggcgccggcaacgacgtcatcttcgcgggca	Protospacer
..*************** .******  *.*

157. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP014802 (Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence) position: , mismatch: 8, identity: 0.742

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
ggcagcggcagcgacatggtcttcggcggcg	Protospacer
..*. *****.****.************.*

158. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP014802 (Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence) position: , mismatch: 8, identity: 0.742

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
ggcaacggcaacgacgaggtcatcggcggca	Protospacer
..*. *********** **** ******.*

159. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP014802 (Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence) position: , mismatch: 8, identity: 0.742

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
ggcaacggcaacgacgaggtcatcggcggca	Protospacer
..*. *********** **** ******.*

160. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP014802 (Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence) position: , mismatch: 8, identity: 0.742

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
ggcaacggcaacgacgaggtcatcggcggca	Protospacer
..*. *********** **** ******.*

161. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP014802 (Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence) position: , mismatch: 8, identity: 0.742

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
ggcaacggcaacgacgaggtcatcggcggca	Protospacer
..*. *********** **** ******.*

162. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 8, identity: 0.742

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
ggcaccggcaacgacgtgctgttcggcggaa	Protospacer
..*.************** * *******.

163. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.742

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
ctcgccggccacgacgtggtcttcctcgcgc	Protospacer
  ******* **************  **  .

164. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP032327 (Azospirillum brasilense strain MTCC4035 plasmid p6, complete sequence) position: , mismatch: 8, identity: 0.742

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
ggcgccggcaacgacgtcatcttcgcgggca	Protospacer
..*************** .******  *.*

165. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP006989 (Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence) position: , mismatch: 8, identity: 0.742

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
cacgccggcaacgacttggtattccttccct	Protospacer
 ************** **** ***  .  **

166. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP021126 (Rhizobium sp. Kim5 plasmid pRetKim5b, complete sequence) position: , mismatch: 8, identity: 0.742

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
cacgccggcaacgacttggtattccttccct	Protospacer
 ************** **** ***  .  **

167. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NC_010998 (Rhizobium etli CIAT 652 plasmid pA, complete sequence) position: , mismatch: 8, identity: 0.742

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
cacgccggcaacgacttggtattccttccct	Protospacer
 ************** **** ***  .  **

168. spacer 7.1|2855703|30|CP029173|CRISPRCasFinder matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.7

gcgccggccgcgacggcatcaccatgggcg	CRISPR spacer
ttctcggcggcgacggcatcaccaaggaat	Protospacer
 . .**** *************** **.

169. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 9, identity: 0.7

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
ctgtggacggcgacctcatggcggccgcgc	Protospacer
 . .**.************ *******

170. spacer 9.1|2856072|30|CP029173|CRISPRCasFinder matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.7

gctcgggcggcgacctcatcgcggccggca	CRISPR spacer
ccatgggcggcgacctcagcgcggcgcctg	Protospacer
 * .************** ******   ..

171. spacer 10.1|3081290|31|CP029173|CRISPRCasFinder matches to NZ_CP053441 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence) position: , mismatch: 9, identity: 0.71

ggtgccgacctcgattacattgccggagggc	CRISPR spacer
gctgccgacctcgatcagattgccgagcaag	Protospacer
* *************.* *******.. ..

172. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 9, identity: 0.71

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
cgtgccggattcgatccaatcatcgcttgat	Protospacer
 ******* ******* ******** . ..

173. spacer 10.2|3081344|31|CP029173|CRISPRCasFinder matches to NZ_CP054609 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

ggtgccggcttcgatcaaatcatcggcgagg	CRISPR spacer
tcctccggcttcgaccaaattatcggcatga	Protospacer
  . **********.*****.******. *.

174. spacer 11.1|3081614|31|CP029173|CRISPRCasFinder matches to NZ_CP024940 (Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence) position: , mismatch: 9, identity: 0.71

aacgccggcaacgacgtggtcttcggcgact	CRISPR spacer
gtcgccggcaacgccgtggtcgtcgcgggga	Protospacer
. *********** ******* ***  *.

175. spacer 10.1|3081290|31|CP029173|CRISPRCasFinder matches to NZ_CP016458 (Blastomonas sp. RAC04 plasmid pBSY18_2, complete sequence) position: , mismatch: 10, identity: 0.677

ggtgccgacctcgattacattgccggagggc	CRISPR spacer
cttgccgacctcgatttcatagccgagcccg	Protospacer
  ************** *** ****..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1245725 : 1296829

Enterobacteria_phage(12.5%)

integrase,transposase

attL 1282435:1282450|attR 1303226:1303241

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI87850.1\|1245725_1246909_-\|transposase	IS3 family transposase	NA	NA	NA	NA
AWI87851.1\|1246960_1247143_+	hypothetical protein	NA	NA	NA	NA
AWI87852.1\|1247729_1248713_-	hypothetical protein	NA	NA	NA	NA
AWI87853.1\|1249194_1250196_+	hypothetical protein	NA	NA	NA	NA
AWI87854.1\|1250985_1252077_+	hypothetical protein	NA	NA	NA	NA
AWI87855.1\|1254204_1254768_+	resolvase	Q1MVP4	Enterobacteria_phage	1.2e-29	42.1
AWI87856.1\|1256788_1258189_+	hypothetical protein	NA	NA	NA	NA
AWI87857.1\|1260491_1260914_-	hypothetical protein	NA	NA	NA	NA
AWI87858.1\|1262747_1263758_-\|integrase	site-specific integrase	W6MYA3	Pseudomonas_phage	4.1e-52	39.4
AWI87859.1\|1264268_1266536_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
AWI87860.1\|1266710_1267136_+	hypothetical protein	NA	NA	NA	NA
AWI87861.1\|1268996_1269998_+	hypothetical protein	L7TM14	Rhizobium_phage	1.2e-14	30.3
AWI87862.1\|1270443_1271370_-\|integrase	integrase	A0A0A1I5U0	Burkholderia_phage	1.4e-59	42.3
AWI91564.1\|1273444_1273630_-	hypothetical protein	NA	NA	NA	NA
AWI91565.1\|1273792_1274629_+	HNH endonuclease	NA	NA	NA	NA
AWI87863.1\|1275186_1275393_-	hypothetical protein	NA	NA	NA	NA
AWI87864.1\|1275660_1276149_-	hypothetical protein	NA	NA	NA	NA
AWI91566.1\|1276343_1276562_+	hypothetical protein	NA	NA	NA	NA
AWI87865.1\|1276987_1277419_+	hypothetical protein	NA	NA	NA	NA
AWI87866.1\|1277532_1278297_+	3-oxoacyl-ACP reductase	A0A2P0VP75	Tetraselmis_virus	4.4e-06	26.1
AWI87867.1\|1278382_1278562_+	hypothetical protein	NA	NA	NA	NA
AWI87868.1\|1278619_1278862_+	hypothetical protein	NA	NA	NA	NA
AWI87869.1\|1279173_1280709_+\|transposase	ISL3-like element ISMdi2 family transposase	NA	NA	NA	NA
AWI87870.1\|1280936_1281668_-	ATPase	A0A059NT77	Lactococcus_phage	9.0e-33	34.8
AWI87871.1\|1281667_1283173_-\|transposase	IS21 family transposase	NA	NA	NA	NA
1282435:1282450	attL	NA	NA	NA	NA
AWI91567.1\|1283978_1285700_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	2.6e-14	37.4
AWI87872.1\|1285725_1286661_+	blue light sensor protein	NA	NA	NA	NA
AWI87873.1\|1286887_1287976_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AWI87874.1\|1288583_1288856_-	hypothetical protein	NA	NA	NA	NA
AWI87875.1\|1288960_1289455_+	MarR family transcriptional regulator	NA	NA	NA	NA
AWI87876.1\|1289571_1291269_-	methyl-accepting chemotaxis protein	NA	NA	NA	NA
AWI87877.1\|1292450_1292948_+	hypothetical protein	NA	NA	NA	NA
AWI87878.1\|1293170_1293944_-	pilus assembly protein	NA	NA	NA	NA
AWI87879.1\|1295725_1296829_-\|integrase	integrase	A0A291AUF0	Sinorhizobium_phage	1.4e-69	43.2
1303226:1303241	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1369754 : 1438383

uncultured_Caudovirales_phage(30.0%)

integrase,transposase

attL 1403271:1403288|attR 1442564:1442581

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI87944.1\|1369754_1371023_-\|transposase	IS256-like element ISMex3 family transposase	A0A2P1JQX9	Mycobacterium_phage	2.5e-91	45.7
AWI87945.1\|1374707_1375148_-	hypothetical protein	NA	NA	NA	NA
AWI87946.1\|1375152_1375734_-	DNA invertase	E5FFF9	Burkholderia_phage	2.5e-41	47.9
AWI87947.1\|1375927_1377586_+\|transposase	IS1182 family transposase	NA	NA	NA	NA
AWI87948.1\|1377729_1377987_-	hypothetical protein	NA	NA	NA	NA
AWI91573.1\|1379754_1380528_-	class III cytochrome C family protein	NA	NA	NA	NA
AWI87949.1\|1380524_1381274_-	hypothetical protein	NA	NA	NA	NA
AWI87950.1\|1381279_1383259_-	flavodoxin	NA	NA	NA	NA
AWI87951.1\|1383298_1383982_-	hypothetical protein	NA	NA	NA	NA
AWI87952.1\|1384172_1384973_+	hypothetical protein	NA	NA	NA	NA
AWI87953.1\|1384948_1385383_-	hypothetical protein	NA	NA	NA	NA
AWI87954.1\|1385413_1385797_-	hypothetical protein	NA	NA	NA	NA
AWI87955.1\|1386018_1386282_-	RND transporter	NA	NA	NA	NA
AWI87956.1\|1386915_1388955_+	copper oxidase	NA	NA	NA	NA
AWI87957.1\|1388964_1389753_+	copper resistance protein CopB	NA	NA	NA	NA
AWI87958.1\|1390056_1390353_+	hypothetical protein	NA	NA	NA	NA
AWI87959.1\|1391436_1392411_-	hypothetical protein	NA	NA	NA	NA
AWI87960.1\|1392851_1393448_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AWI87961.1\|1395594_1396311_-	GntR family transcriptional regulator	NA	NA	NA	NA
AWI87962.1\|1396461_1397760_+	MFS transporter	NA	NA	NA	NA
AWI87963.1\|1397801_1398878_+	tartrate dehydrogenase	NA	NA	NA	NA
AWI87964.1\|1398882_1400142_+	glycerate kinase	NA	NA	NA	NA
AWI91574.1\|1400181_1401594_+	pyruvate kinase	NA	NA	NA	NA
AWI87965.1\|1402045_1402258_+	hypothetical protein	NA	NA	NA	NA
AWI87966.1\|1402305_1403052_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	2.2e-82	66.1
AWI87967.1\|1403102_1403981_+	ArsR family transcriptional regulator	A0A2H4J8A6	uncultured_Caudovirales_phage	5.8e-26	43.9
1403271:1403288	attL	NA	NA	NA	NA
AWI87968.1\|1403980_1404406_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.9e-43	61.3
AWI87969.1\|1404414_1405482_+	arsenical-resistance protein	NA	NA	NA	NA
AWI87970.1\|1405471_1406647_+	MFS transporter	NA	NA	NA	NA
AWI87971.1\|1406834_1407107_+	hypothetical protein	NA	NA	NA	NA
AWI91575.1\|1409027_1410677_-\|transposase	ISL3 family transposase ISMex10	NA	NA	NA	NA
AWI87972.1\|1410811_1411994_+\|transposase	IS3-like element ISMex5 family transposase	S5WIU1	Leptospira_phage	7.3e-32	32.4
AWI87973.1\|1412003_1412252_+	hypothetical protein	NA	NA	NA	NA
AWI87974.1\|1412151_1412832_-	RNA polymerase subunit sigma-70	A0A0F6TH34	Sinorhizobium_phage	1.9e-13	38.7
AWI87975.1\|1413312_1414902_-	cell filamentation protein Fic	NA	NA	NA	NA
AWI87976.1\|1415073_1415289_-	hypothetical protein	NA	NA	NA	NA
AWI87977.1\|1415346_1415829_-	hypothetical protein	NA	NA	NA	NA
AWI87978.1\|1416130_1416439_+	cytochrome C biogenesis protein	NA	NA	NA	NA
AWI87979.1\|1417996_1419232_-	carbohydrate porin	NA	NA	NA	NA
AWI87980.1\|1420576_1420999_-	hypothetical protein	NA	NA	NA	NA
AWI87981.1\|1421947_1422682_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.5e-27	33.8
AWI87982.1\|1422678_1424013_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	4.5e-06	33.7
AWI87983.1\|1424109_1424364_+	hypothetical protein	NA	NA	NA	NA
AWI87984.1\|1424926_1425118_+	hypothetical protein	NA	NA	NA	NA
AWI87985.1\|1425462_1425834_+	hypothetical protein	NA	NA	NA	NA
AWI87986.1\|1425958_1427323_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AWI87987.1\|1427334_1430583_+	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA
AWI87988.1\|1430588_1431143_+	threonyl-trna synthetase	NA	NA	NA	NA
AWI87989.1\|1431188_1432106_+	cation transporter	A0A1V0SED0	Indivirus	6.7e-09	39.3
AWI87990.1\|1432611_1432866_+	hypothetical protein	NA	NA	NA	NA
AWI87991.1\|1433241_1434786_-	DUF2235 domain-containing protein	NA	NA	NA	NA
AWI87992.1\|1434988_1435729_-	hypothetical protein	NA	NA	NA	NA
AWI87993.1\|1435916_1436183_+	hypothetical protein	NA	NA	NA	NA
AWI87994.1\|1436298_1436505_-	hypothetical protein	NA	NA	NA	NA
AWI87995.1\|1436580_1436829_-	hypothetical protein	NA	NA	NA	NA
AWI87996.1\|1437656_1437893_+	hypothetical protein	NA	NA	NA	NA
AWI87997.1\|1438092_1438383_+\|integrase	integrase	NA	NA	NA	NA
1442564:1442581	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1686022 : 1723699

Tupanvirus(14.29%)

tail,head,protease,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI88190.1\|1686022_1687486_-\|protease	serine protease	NA	NA	NA	NA
AWI88191.1\|1687709_1693016_+	alpha-2-macroglobulin	NA	NA	NA	NA
AWI91593.1\|1693071_1695135_+	penicillin-binding protein 1C	NA	NA	NA	NA
AWI88192.1\|1695285_1695606_+	quaternary ammonium compound-resistance protein SugE	NA	NA	NA	NA
AWI88193.1\|1695615_1696407_-	transcriptional regulator	NA	NA	NA	NA
AWI88194.1\|1696457_1697105_-	class GN sortase	NA	NA	NA	NA
AWI88195.1\|1697101_1699285_-	marine proteobacterial sortase target protein	A0A2K9L4P5	Tupanvirus	2.4e-12	21.4
AWI88196.1\|1699518_1700127_+	histidine phosphatase family protein	NA	NA	NA	NA
AWI88197.1\|1700117_1700837_-	hypothetical protein	NA	NA	NA	NA
AWI88198.1\|1700901_1701915_-	nickel transporter	NA	NA	NA	NA
AWI88199.1\|1701905_1702571_-	DUF1007 domain-containing protein	NA	NA	NA	NA
AWI88200.1\|1702801_1703260_-	cytochrome C biogenesis protein	NA	NA	NA	NA
AWI88201.1\|1703256_1705257_-	heme lyase NrfEFG subunit NrfE	NA	NA	NA	NA
AWI88202.1\|1705315_1705837_-	cytochrome c maturation protein CcmE	NA	NA	NA	NA
AWI91594.1\|1705997_1707548_-	c-type cytochrome biogenesis protein CcmI	NA	NA	NA	NA
AWI88203.1\|1707695_1709111_-	ATP-binding protein	NA	NA	NA	NA
AWI88204.1\|1709203_1709440_+	transcription factor	NA	NA	NA	NA
AWI88205.1\|1709439_1709838_+	VapC toxin family PIN domain ribonuclease	NA	NA	NA	NA
AWI88206.1\|1709842_1710520_-	DNA-binding response regulator	NA	NA	NA	NA
AWI88207.1\|1710569_1711124_-	hypothetical protein	NA	NA	NA	NA
AWI88208.1\|1711137_1711365_-	hypothetical protein	NA	NA	NA	NA
AWI88209.1\|1711385_1711739_-	hypothetical protein	NA	NA	NA	NA
AWI88210.1\|1711801_1712374_-	hypothetical protein	NA	NA	NA	NA
AWI88211.1\|1712424_1712985_-	glycoside hydrolase	W6E9Q2	Rhizobium_phage	2.8e-26	43.4
AWI88212.1\|1713031_1714114_-	hypothetical protein	A0A0K1LM54	Rhodobacter_phage	3.4e-36	38.8
AWI88213.1\|1717162_1717789_-\|tail	phage tail protein	K7YBG2	uncultured_Mediterranean_phage	2.8e-06	44.4
AWI88214.1\|1717788_1718019_-\|tail	phage tail assembly chaperone	NA	NA	NA	NA
AWI88215.1\|1718015_1718342_-	gene transfer agent family protein	NA	NA	NA	NA
AWI88216.1\|1718344_1718755_-\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
AWI88217.1\|1718785_1719205_-	DUF3168 domain-containing protein	NA	NA	NA	NA
AWI88218.1\|1719564_1720140_-	hypothetical protein	NA	NA	NA	NA
AWI88219.1\|1720173_1720929_+	peptidase S1	NA	NA	NA	NA
AWI88220.1\|1721074_1721923_+	peptidase S1	I6WTR7	Cotesia_sesamiae_Mombasa_bracovirus	5.4e-05	22.9
AWI88221.1\|1721934_1723200_-\|capsid	phage major capsid protein	M1FPN2	Enterobacteria_phage	2.2e-79	44.5
AWI88222.1\|1723228_1723699_-\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	5.6e-28	50.7

DBSCAN-SWA_4

2870247 : 2925860

Rhizobium_phage(20.0%)

portal,terminase,protease,transposase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI89185.1\|2870247_2870874_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	2.6e-65	63.5
AWI89186.1\|2871120_2872392_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.5e-133	58.8
AWI89187.1\|2872660_2875084_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	4.4e-193	47.4
AWI89188.1\|2875381_2875648_+	hypothetical protein	NA	NA	NA	NA
AWI89189.1\|2875656_2875866_+	hypothetical protein	NA	NA	NA	NA
AWI89190.1\|2877466_2878216_-	hypothetical protein	A0A2N9QVU4	Dishui_lake_phycodnavirus	1.9e-17	23.4
AWI89191.1\|2878300_2878867_+	hypothetical protein	A0A1V0SAW9	Catovirus	1.5e-35	50.0
AWI89192.1\|2879015_2879471_-	hypothetical protein	NA	NA	NA	NA
AWI89193.1\|2879467_2879923_-	hypothetical protein	NA	NA	NA	NA
AWI89194.1\|2879931_2880138_-	hypothetical protein	NA	NA	NA	NA
AWI89195.1\|2880141_2880369_-	peptidoglycan-binding protein	NA	NA	NA	NA
AWI89196.1\|2880365_2880662_-	hypothetical protein	NA	NA	NA	NA
AWI91680.1\|2880742_2881417_-	TIGR02594 family protein	R9TRQ2	Rhizobium_phage	9.0e-88	69.5
AWI89197.1\|2881912_2882209_-	hypothetical protein	NA	NA	NA	NA
AWI89198.1\|2882205_2882712_-	hypothetical protein	NA	NA	NA	NA
AWI89199.1\|2882711_2883902_-	hypothetical protein	NA	NA	NA	NA
AWI89200.1\|2889001_2889307_+	hypothetical protein	NA	NA	NA	NA
AWI89201.1\|2889343_2889736_-	hypothetical protein	NA	NA	NA	NA
AWI89202.1\|2889848_2890700_-	hypothetical protein	A0A141GEX9	Brucella_phage	2.1e-25	36.7
AWI89203.1\|2890713_2890947_-	hypothetical protein	NA	NA	NA	NA
AWI89204.1\|2891025_2891421_+	hypothetical protein	NA	NA	NA	NA
AWI89205.1\|2891737_2891992_+	hypothetical protein	NA	NA	NA	NA
AWI89206.1\|2892179_2892617_-	hypothetical protein	NA	NA	NA	NA
AWI89207.1\|2892627_2892921_-	hypothetical protein	NA	NA	NA	NA
AWI89208.1\|2892929_2893472_-	hypothetical protein	NA	NA	NA	NA
AWI89209.1\|2893606_2893864_+	hypothetical protein	NA	NA	NA	NA
AWI89210.1\|2893868_2894249_-	hypothetical protein	NA	NA	NA	NA
AWI89211.1\|2894252_2897753_-	hypothetical protein	A0A1V1FCQ8	Vibrio_phage	2.1e-10	50.7
AWI89212.1\|2897742_2899008_-\|capsid	major capsid protein	A0A068CC75	Rhizobium_phage	3.4e-144	72.7
AWI89213.1\|2899035_2899446_-	hypothetical protein	A0A068CDC3	Rhizobium_phage	1.8e-51	76.9
AWI89214.1\|2899485_2900655_-	peptidase S14	A0A0A8IKZ4	Aurantimonas_phage	4.2e-48	46.8
AWI89215.1\|2900667_2901660_-\|portal	phage portal protein	Q75QM9	Wolbachia_phage	5.6e-70	45.1
AWI89216.1\|2901738_2902947_-	hypothetical protein	NA	NA	NA	NA
AWI89217.1\|2902949_2903525_-	phage P22, antirepressor protein	A0A0M3LR56	Mannheimia_phage	6.0e-24	40.3
AWI89218.1\|2903840_2904056_-	hypothetical protein	NA	NA	NA	NA
AWI89219.1\|2904052_2904391_-	hypothetical protein	NA	NA	NA	NA
AWI89220.1\|2904984_2905782_+	hypothetical protein	NA	NA	NA	NA
AWI89221.1\|2906516_2910689_+	hypothetical protein	NA	NA	NA	NA
AWI89222.1\|2910838_2911474_-	hypothetical protein	NA	NA	NA	NA
AWI89223.1\|2911591_2911993_-	hypothetical protein	NA	NA	NA	NA
AWI89224.1\|2912107_2913163_-	hypothetical protein	NA	NA	NA	NA
AWI89225.1\|2913209_2914070_-	hypothetical protein	NA	NA	NA	NA
AWI89226.1\|2914081_2914300_-	hypothetical protein	NA	NA	NA	NA
AWI89227.1\|2914435_2916139_+	hypothetical protein	NA	NA	NA	NA
AWI89228.1\|2917100_2918177_-	DUF262 domain-containing protein	NA	NA	NA	NA
AWI89229.1\|2918447_2919203_-	hypothetical protein	NA	NA	NA	NA
AWI89230.1\|2919831_2920098_-	hypothetical protein	NA	NA	NA	NA
AWI89231.1\|2920123_2920375_-	hypothetical protein	NA	NA	NA	NA
AWI89232.1\|2920371_2920647_-	hypothetical protein	NA	NA	NA	NA
AWI89233.1\|2920639_2920855_-	DNA-binding protein	NA	NA	NA	NA
AWI89234.1\|2921604_2921829_-	hypothetical protein	NA	NA	NA	NA
AWI89235.1\|2921831_2923913_-\|terminase	terminase	A0A2H4JIC6	uncultured_Caudovirales_phage	1.3e-116	40.7
AWI89236.1\|2923857_2924496_-	hypothetical protein	NA	NA	NA	NA
AWI89237.1\|2924591_2925860_-\|transposase	IS256-like element ISMex3 family transposase	A0A2P1JQX9	Mycobacterium_phage	2.5e-91	45.7

DBSCAN-SWA_5

4181838 : 4250718

Paenibacillus_phage(11.11%)

integrase,transposase

attL 4216454:4216472|attR 4249149:4249167

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI90313.1\|4181838_4182605_-\|transposase	IS5 family transposase	NA	NA	NA	NA
AWI90314.1\|4182738_4183513_+\|transposase	IS5 family transposase	A0A0N9SJT9	Paenibacillus_phage	2.1e-11	36.4
AWI90315.1\|4183615_4184416_+\|transposase	IS5 family transposase	NA	NA	NA	NA
AWI90316.1\|4186261_4186678_-	hypothetical protein	NA	NA	NA	NA
AWI90317.1\|4187944_4189741_+	hypothetical protein	NA	NA	NA	NA
AWI90318.1\|4190036_4191497_-	hypothetical protein	NA	NA	NA	NA
AWI90319.1\|4192584_4192839_-	hypothetical protein	NA	NA	NA	NA
AWI90320.1\|4192956_4193343_-	MucR family transcriptional regulator	NA	NA	NA	NA
AWI90321.1\|4193442_4194030_+	hypothetical protein	NA	NA	NA	NA
AWI90322.1\|4194031_4194520_+	hypothetical protein	NA	NA	NA	NA
AWI90323.1\|4194513_4194861_+	hypothetical protein	NA	NA	NA	NA
AWI90324.1\|4194857_4195310_+	hypothetical protein	NA	NA	NA	NA
AWI90325.1\|4195403_4195670_-	hypothetical protein	NA	NA	NA	NA
AWI90326.1\|4195850_4196045_+	hypothetical protein	A0A2H4IB20	Erwinia_phage	2.1e-05	52.2
AWI90327.1\|4197690_4197960_+	hypothetical protein	NA	NA	NA	NA
AWI90328.1\|4197962_4199906_-	hybrid sensor histidine kinase/response regulator	NA	NA	NA	NA
AWI90329.1\|4199902_4200691_-	alpha/beta hydrolase	NA	NA	NA	NA
AWI90330.1\|4200771_4202145_-	histidine kinase	NA	NA	NA	NA
AWI90331.1\|4202452_4202815_+	hypothetical protein	Q06VL0	Trichoplusia_ni_ascovirus	2.5e-20	45.7
AWI90332.1\|4202936_4205354_+	hybrid sensor histidine kinase/response regulator	NA	NA	NA	NA
AWI90333.1\|4206408_4207549_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	4.0e-35	35.9
AWI90334.1\|4207995_4208784_+	diguanylate phosphodiesterase	NA	NA	NA	NA
AWI90335.1\|4208968_4209154_+	DUF2934 domain-containing protein	NA	NA	NA	NA
AWI91774.1\|4209221_4209695_-	histidine kinase	NA	NA	NA	NA
AWI90336.1\|4209921_4210374_+	blue light sensor protein	NA	NA	NA	NA
AWI90337.1\|4211429_4211792_+	PilZ domain-containing protein	NA	NA	NA	NA
AWI90338.1\|4214016_4214424_-	transcriptional regulator	Q8W6G2	Sinorhizobium_phage	2.3e-14	43.9
AWI90339.1\|4214649_4215387_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
AWI90340.1\|4215418_4215655_-	hypothetical protein	NA	NA	NA	NA
AWI90341.1\|4216315_4216513_-	hypothetical protein	NA	NA	NA	NA
4216454:4216472	attL	NA	NA	NA	NA
AWI90342.1\|4216655_4216940_-	hypothetical protein	NA	NA	NA	NA
AWI90343.1\|4217249_4217750_+	hypothetical protein	NA	NA	NA	NA
AWI90344.1\|4218092_4218569_-	hypothetical protein	NA	NA	NA	NA
AWI90345.1\|4219459_4221697_-	histidine kinase	NA	NA	NA	NA
AWI90346.1\|4221772_4222207_-	hypothetical protein	NA	NA	NA	NA
AWI90347.1\|4222406_4223927_-	GGDEF domain-containing protein	NA	NA	NA	NA
AWI90348.1\|4224155_4224368_-	hypothetical protein	NA	NA	NA	NA
AWI90349.1\|4224508_4224844_+	hypothetical protein	NA	NA	NA	NA
AWI90350.1\|4225320_4225665_-	hypothetical protein	NA	NA	NA	NA
AWI90351.1\|4225664_4227362_-	methyl-accepting chemotaxis protein	NA	NA	NA	NA
AWI90352.1\|4227653_4227962_+	hypothetical protein	NA	NA	NA	NA
AWI90353.1\|4228089_4229631_-	GGDEF domain-containing protein	G3MA91	Bacillus_virus	8.3e-12	28.4
AWI90354.1\|4231032_4233420_+	bifunctional diguanylate cyclase/phosphodiesterase	NA	NA	NA	NA
AWI91775.1\|4233952_4234582_-\|integrase	integrase	A0A0A8WF93	Clostridium_phage	6.2e-06	24.2
AWI90355.1\|4234979_4235396_+	response regulator	NA	NA	NA	NA
AWI90356.1\|4235499_4238049_+	two-component system sensor histidine kinase/response regulator	B5LWN8	Feldmannia_species_virus	2.7e-23	28.6
AWI90357.1\|4238489_4239584_-	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
AWI90358.1\|4239855_4242018_-	molybdopterin oxidoreductase	A0A077SK27	Escherichia_phage	1.4e-52	25.7
AWI90359.1\|4242247_4243714_+	transcriptional regulator	NA	NA	NA	NA
AWI91776.1\|4244105_4245113_+	endonuclease	NA	NA	NA	NA
AWI90360.1\|4245698_4245959_+	hypothetical protein	NA	NA	NA	NA
AWI90361.1\|4246029_4246491_+	hypothetical protein	NA	NA	NA	NA
AWI90362.1\|4246493_4247729_+	secretion protein HlyD	NA	NA	NA	NA
AWI90363.1\|4249908_4250718_-\|transposase	IS5 family transposase	NA	NA	NA	NA
4249149:4249167	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP029174

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 15363

Pseudomonas_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI91895.1\|2968_3247_+	conjugal transfer protein TraC	NA	NA	NA	NA
AWI91896.1\|3230_3428_+	conjugal transfer protein TraD	NA	NA	NA	NA
AWI91897.1\|3424_5449_+	conjugal transfer protein TraG	NA	NA	NA	NA
AWI91898.1\|6646_7114_+	hypothetical protein	NA	NA	NA	NA
AWI91899.1\|7110_8040_-	DUF2493 domain-containing protein	A0A1B0V0Z8	Roseobacter_phage	4.0e-09	32.1
AWI91900.1\|8374_9433_-	DNA primase	A0A0U4B0G9	Pseudomonas_phage	1.1e-10	34.9
AWI91901.1\|9458_13832_-	methylase	A0A1Y0T2N3	Pseudomonas_phage	2.4e-08	28.7
AWI91902.1\|15048_15363_-	DUF4326 domain-containing protein	Q6UYH1	Burkholderia_phage	4.6e-18	50.6

DBSCAN-SWA_2

20846 : 70409

Enterobacteria_phage(36.36%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI91909.1\|20846_21863_-	antirestriction protein ArdC	A0A1V0EEV1	Caulobacter_phage	1.1e-49	38.3
AWI91910.1\|22560_23379_-\|transposase	IS5 family transposase	NA	NA	NA	NA
AWI91911.1\|23988_25197_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AWI91912.1\|27120_27878_-\|transposase	IS5-like element ISMpo7 family transposase	A0A0N9SJT9	Paenibacillus_phage	1.2e-08	35.0
AWI91913.1\|28056_28665_+	hypothetical protein	NA	NA	NA	NA
AWI91914.1\|28710_30360_+\|transposase	ISL3-like element ISMex10 family transposase	NA	NA	NA	NA
AWI92069.1\|30908_31265_-	DUF736 domain-containing protein	NA	NA	NA	NA
AWI91915.1\|31676_32078_-	PIN domain nuclease	NA	NA	NA	NA
AWI91916.1\|32081_32324_-	hypothetical protein	NA	NA	NA	NA
AWI91917.1\|32700_33252_-	hypothetical protein	NA	NA	NA	NA
AWI92070.1\|33235_33490_-	prevent-host-death family protein	NA	NA	NA	NA
AWI91918.1\|33556_33943_-	hypothetical protein	NA	NA	NA	NA
AWI91919.1\|33939_34254_-	hypothetical protein	NA	NA	NA	NA
AWI91920.1\|34269_34482_-	hypothetical protein	NA	NA	NA	NA
AWI91921.1\|34689_35121_+	hypothetical protein	A0A142UM78	Mycobacterium_phage	2.8e-10	31.8
AWI92071.1\|35165_35597_+	hypothetical protein	NA	NA	NA	NA
AWI92072.1\|38919_39786_-	AAA family ATPase	U5N3V8	Enterobacteria_phage	1.3e-51	46.7
AWI91922.1\|39782_41174_-\|transposase	IS21-like element ISMex13 family transposase	U5N3F9	Enterobacteria_phage	1.1e-44	34.1
AWI91923.1\|43853_44969_+	LuxR family transcriptional regulator	NA	NA	NA	NA
AWI91924.1\|44961_45360_+	hypothetical protein	NA	NA	NA	NA
AWI91925.1\|45395_47699_+	hypothetical protein	NA	NA	NA	NA
AWI91926.1\|48299_49091_+	hypothetical protein	NA	NA	NA	NA
AWI91927.1\|49111_50509_+	hypothetical protein	NA	NA	NA	NA
AWI91928.1\|50505_50706_+	hypothetical protein	NA	NA	NA	NA
AWI91929.1\|50942_51815_+	hypothetical protein	NA	NA	NA	NA
AWI91930.1\|52665_52896_+	hypothetical protein	NA	NA	NA	NA
AWI91931.1\|54625_55081_+	IS66 family insertion sequence hypothetical protein	A0A1B0YZU7	Pseudomonas_phage	8.4e-05	39.7
AWI91932.1\|55077_55434_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AWI91933.1\|56409_57801_+\|transposase	IS21-like element ISMex13 family transposase	U5N3F9	Enterobacteria_phage	1.1e-44	34.1
AWI91934.1\|57797_58664_+	AAA family ATPase	U5N3V8	Enterobacteria_phage	1.3e-51	46.7
AWI91935.1\|59635_61882_+	hypothetical protein	NA	NA	NA	NA
AWI91936.1\|62111_63125_+	GGDEF domain-containing protein	G3MA91	Bacillus_virus	4.6e-11	27.1
AWI92073.1\|65901_67200_-\|transposase	ISNCY-like element ISMex6 family transposase	NA	NA	NA	NA
AWI91937.1\|67392_68744_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	1.1e-10	27.1
AWI91938.1\|68880_69750_-	quinol dehydrogenase ferredoxin subunit NapH	NA	NA	NA	NA
AWI91939.1\|69746_70409_-	ferredoxin-type protein NapG	A0A077SLP0	Escherichia_phage	2.5e-05	29.3

DBSCAN-SWA_3

86045 : 209080

Paenibacillus_phage(20.69%)

transposase,integrase

attL 106743:106802|attR 135063:135354

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI91953.1\|86045_87599_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
AWI91954.1\|87789_89325_+\|transposase	ISL3-like element ISMdi2 family transposase	NA	NA	NA	NA
AWI91955.1\|89684_90428_-	AAA family ATPase	K4HZD4	Acidithiobacillus_phage	1.4e-57	46.7
AWI91956.1\|90439_91954_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	2.5e-122	46.6
AWI91957.1\|93931_95002_-	hypothetical protein	NA	NA	NA	NA
AWI91958.1\|95223_95787_-	hypothetical protein	NA	NA	NA	NA
AWI91959.1\|95783_96878_-	hypothetical protein	NA	NA	NA	NA
AWI91960.1\|97114_97597_-	hypothetical protein	NA	NA	NA	NA
AWI91961.1\|97598_104408_-	hypothetical protein	NA	NA	NA	NA
AWI91962.1\|104762_106454_+	hypothetical protein	NA	NA	NA	NA
AWI91963.1\|106598_107356_-\|transposase	IS5-like element ISMpo7 family transposase	A0A0N9SJT9	Paenibacillus_phage	1.2e-08	35.0
106743:106802	attL	NA	NA	NA	NA
AWI91964.1\|107496_107829_-	hypothetical protein	NA	NA	NA	NA
AWI91965.1\|107837_108392_-	hypothetical protein	NA	NA	NA	NA
AWI91966.1\|109096_109471_-	hypothetical protein	NA	NA	NA	NA
AWI91967.1\|109448_110051_-	hypothetical protein	A0A2H4N7Y7	Lake_Baikal_phage	6.8e-10	49.2
AWI91968.1\|110023_110281_-	hypothetical protein	NA	NA	NA	NA
AWI91969.1\|110277_111981_-	AAA family ATPase	A0A1V0CP82	Kaumoebavirus	6.8e-07	30.2
AWI91970.1\|112681_113125_+	hypothetical protein	NA	NA	NA	NA
AWI91971.1\|113121_113367_+	hypothetical protein	NA	NA	NA	NA
AWI91972.1\|113390_113849_-	hypothetical protein	NA	NA	NA	NA
AWI91973.1\|114492_115554_-\|integrase	integrase	Q5QBN6	Enterobacteria_phage	1.7e-16	26.3
AWI91974.1\|115840_116062_+	AbrB family transcriptional regulator	NA	NA	NA	NA
AWI91975.1\|116058_116445_+	VapC toxin family PIN domain ribonuclease	NA	NA	NA	NA
AWI91976.1\|118923_120192_+\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	4.6e-93	45.9
AWI91977.1\|120343_120862_-	hypothetical protein	NA	NA	NA	NA
AWI91978.1\|121419_122591_-\|transposase	IS3-like element ISMch1 family transposase	S5WIU1	Leptospira_phage	4.0e-14	27.9
AWI91979.1\|122663_122837_+	hypothetical protein	NA	NA	NA	NA
AWI91980.1\|122839_123421_+	TetR family transcriptional regulator	A0A0R6PIB6	Moraxella_phage	3.6e-16	32.6
AWI91981.1\|124722_125976_-\|transposase	IS701 family transposase	NA	NA	NA	NA
AWI91982.1\|126031_126807_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	2.2e-21	41.5
AWI91983.1\|126888_130053_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AWI92076.1\|131853_132306_-	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	6.4e-13	40.2
AWI91984.1\|132809_133331_-	hypothetical protein	NA	NA	NA	NA
AWI91985.1\|133821_135034_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	6.9e-46	44.1
AWI91986.1\|135429_136458_+\|transposase	IS110 family transposase	NA	NA	NA	NA
135063:135354	attR	NA	NA	NA	NA
AWI91987.1\|137090_137498_-	globin	NA	NA	NA	NA
AWI91988.1\|137582_138131_-	aldehyde-activating protein	NA	NA	NA	NA
AWI91989.1\|138424_139723_-	type III glutamate--ammonia ligase	NA	NA	NA	NA
AWI91990.1\|139812_141147_-	FMN-binding glutamate synthase family protein	NA	NA	NA	NA
AWI91991.1\|141146_141836_-	protein glxC	NA	NA	NA	NA
AWI92077.1\|141835_142729_-	glutamine amidotransferase	F2Y1G4	Organic_Lake_phycodnavirus	3.6e-07	25.7
AWI91992.1\|143032_144094_-	hypothetical protein	NA	NA	NA	NA
AWI91993.1\|144104_145046_-	oxidoreductase	NA	NA	NA	NA
AWI91994.1\|145048_145624_-	hypothetical protein	NA	NA	NA	NA
AWI91995.1\|146191_146836_+	XRE family transcriptional regulator	NA	NA	NA	NA
AWI91996.1\|146900_147675_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	2.2e-21	41.5
AWI91997.1\|148505_149840_-\|transposase	IS1182 family transposase	NA	NA	NA	NA
AWI91998.1\|150057_151143_-	type VI secretion protein	NA	NA	NA	NA
AWI91999.1\|151139_151658_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
AWI92000.1\|151954_152746_-\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	4.0e-34	41.3
AWI92001.1\|153184_153454_-	hypothetical protein	NA	NA	NA	NA
AWI92002.1\|153864_154875_-	chromosome partitioning protein ParB	NA	NA	NA	NA
AWI92003.1\|154887_155646_-	ParA family protein	V5UP47	Mycobacterium_phage	8.0e-08	28.2
AWI92004.1\|156667_157696_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AWI92005.1\|159653_159923_-	hypothetical protein	NA	NA	NA	NA
AWI92006.1\|160201_161149_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AWI92007.1\|161343_161727_-	DUF736 domain-containing protein	NA	NA	NA	NA
AWI92008.1\|162243_163594_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	1.1e-10	27.1
AWI92009.1\|164056_165148_-	plasmid partitioning protein RepB	A0A240F4U0	Ochrobactrum_phage	6.6e-48	42.7
AWI92078.1\|165152_166328_-	plasmid partitioning protein RepA	A0A240F4U1	Ochrobactrum_phage	9.4e-133	61.1
AWI92010.1\|166539_167766_-	replication initiation protein RepC	L7TKN6	Rhizobium_phage	3.5e-21	31.2
AWI92011.1\|168046_169129_-	hypothetical protein	NA	NA	NA	NA
AWI92012.1\|172144_172399_+	transcriptional regulator	NA	NA	NA	NA
AWI92013.1\|172398_173394_+	toxin HipA	NA	NA	NA	NA
AWI92014.1\|173407_174165_-\|transposase	IS5-like element ISMpo7 family transposase	A0A0N9SJT9	Paenibacillus_phage	1.2e-08	35.0
AWI92015.1\|174297_174570_+	hypothetical protein	NA	NA	NA	NA
AWI92016.1\|174861_175791_-	hypothetical protein	A0A1B0V0Z8	Roseobacter_phage	2.6e-08	31.1
AWI92017.1\|176122_177181_-	DNA primase	A0A0U4B0G9	Pseudomonas_phage	1.2e-09	32.9
AWI92018.1\|181594_182369_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	2.2e-21	41.5
AWI92019.1\|185265_186023_-\|transposase	IS5-like element ISMpo7 family transposase	A0A0N9SJT9	Paenibacillus_phage	1.2e-08	35.0
AWI92020.1\|186547_187898_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	1.1e-10	27.1
AWI92021.1\|188407_189856_+\|transposase	IS1182 family transposase	NA	NA	NA	NA
AWI92022.1\|191219_192263_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AWI92023.1\|193290_194157_+	AAA family ATPase	U5N3V8	Enterobacteria_phage	1.3e-51	46.7
AWI92024.1\|194639_194990_+	hypothetical protein	NA	NA	NA	NA
AWI92025.1\|195606_195819_+	hypothetical protein	NA	NA	NA	NA
AWI92026.1\|195927_196107_-	hypothetical protein	NA	NA	NA	NA
AWI92027.1\|196267_196903_-	transcriptional regulator	NA	NA	NA	NA
AWI92028.1\|197285_197555_-	hypothetical protein	NA	NA	NA	NA
AWI92029.1\|197837_198080_-	hypothetical protein	NA	NA	NA	NA
AWI92079.1\|198725_200150_+	ammonia channel protein	H8ZJB2	Ostreococcus_tauri_virus	8.4e-27	29.5
AWI92030.1\|200235_201234_-	AraC family transcriptional regulator	NA	NA	NA	NA
AWI92031.1\|201339_202590_+	sarcosine oxidase subunit beta	NA	NA	NA	NA
AWI92032.1\|202602_202890_+	sarcosine oxidase subunit delta	NA	NA	NA	NA
AWI92033.1\|202886_205928_+	sarcosine oxidase subunit alpha	NA	NA	NA	NA
AWI92034.1\|205920_206541_+	sarcosine oxidase subunit gamma	NA	NA	NA	NA
AWI92035.1\|206734_207451_+	XRE family transcriptional regulator	NA	NA	NA	NA
AWI92036.1\|207745_209080_+\|transposase	IS1182 family transposase	Q9MBP7	Staphylococcus_prophage	3.6e-11	20.0

DBSCAN-SWA_4

218858 : 219497

Human_gut_gokushovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI92080.1\|218858_219497_-	hypothetical protein	A0A1X9Q111	Human_gut_gokushovirus	2.8e-06	34.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP029173

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP029174

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection