CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
CP029165	Staphylococcus aureus strain SVH7513 plasmid pSVH7513b, complete sequence	0 crisprs	NA	0	0	0
CP029166	Staphylococcus aureus strain SVH7513 chromosome, complete genome	7 crisprs	cas3,DEDDh,DinG,csa3,WYL	5	1	11
CP029167	Staphylococcus aureus strain SVH7513 plasmid pSVH7513a	0 crisprs	csa3	0	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP029166_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029166_1

451715-451815

Orphan

Consensus_repeat	Method
TTATGAATTGAGTATTAAATTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029166_1

>merge|CP029166|1|451715-451815|CRISPRCasFinder
TTATGAATTGAGTATTAAATTTGAAAGTAAATTACAGTTCTATAGGTTTATAAAAATCAGTTTTTAAATCAAAGCTATATATGAATTGAGTATTAAATTTG

>CP029166|1|1|451715-451815|CRISPRCasFinder
TTATGAATTGAGTATTAAATTTG	AAAGTAAATTACAGTTCTATAGGTTTATAAAAATCAGTTTTTAAATCAAAGCTAT
ATATGAATTGAGTATTAAATTTG

Protein	Signature genes	Signature genes Name	Protein_function
CP029166.1\|AWI92479.1\|449466_450855_-\|L-cystine-transporter	unknown	unknown	gnl\|CDD\|224736
CP029166.1\|AWI92477.1\|446020_447544_-\|alkyl-hydroperoxide-reductase-subunit-F	unknown	unknown	gnl\|CDD\|237942
CP029166.1\|AWI92490.1\|460822_461023_-\|DUF3173-domain-containing-protein	unknown	unknown	gnl\|CDD\|371495
CP029166.1\|AWI92491.1\|461520_461751_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378900
CP029166.1\|AWI92473.1\|443664_444246_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
CP029166.1\|AWI92472.1\|443277_443487_-\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI92474.1\|444311_444695_-\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI92488.1\|457993_459535_+\|GMP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|234614
CP029166.1\|AWI92484.1\|453698_454106_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378584
CP029166.1\|AWI92482.1\|451831_452776_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235334
CP029166.1\|AWI92483.1\|452893_453556_-\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI92486.1\|455196_456465_+\|purine-permease	unknown	unknown	gnl\|CDD\|274468
CP029166.1\|AWI92485.1\|454618_455197_+\|xanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|181705
CP029166.1\|AWI92478.1\|447559_448129_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|211789
CP029166.1\|AWI92475.1\|444949_445576_-\|NDxxF-motif-lipoprotein	unknown	unknown	gnl\|CDD\|380196
CP029166.1\|AWI92489.1\|459602_460796_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
CP029166.1\|AWI92481.1\|451248_451506_-\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI92487.1\|456502_457969_+\|IMP-dehydrogenase	unknown	unknown	gnl\|CDD\|235507
CP029166.1\|AWI92480.1\|450939_451041_+\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI92476.1\|445648_445942_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP029166.1\|AWI92479.1\|449466_450855_-\|L-cystine-transporter	gnl\|CDD\|224736	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only].	0
CP029166.1\|AWI92477.1\|446020_447544_-\|alkyl-hydroperoxide-reductase-subunit-F	gnl\|CDD\|237942	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional.	0
CP029166.1\|AWI92473.1\|443664_444246_+\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	2.78414e-49
CP029166.1\|AWI92484.1\|453698_454106_-\|hypothetical-protein	gnl\|CDD\|378584	pfam11181, YflT, Heat induced stress protein YflT. YflT is a heat induced protein.	2.0219e-12
CP029166.1\|AWI92488.1\|457993_459535_+\|GMP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
CP029166.1\|AWI92486.1\|455196_456465_+\|purine-permease	gnl\|CDD\|274468	TIGR03173, pbuX, xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.	2.75897e-170
CP029166.1\|AWI92490.1\|460822_461023_-\|DUF3173-domain-containing-protein	gnl\|CDD\|371495	pfam11372, DUF3173, Domain of unknown function (DUF3173). This family of proteins with unknown function appears to be restricted to Firmicutes. These proteins appear to be distantly related to HHH domains and are therefore likely to be DNA-binding. Genomic environment-visualisation confirms the likely function as being DNA-binding, as this short protein lies very closely between an integrase and a replication protein (http://www.microbesonline.org/).	2.02242e-22
CP029166.1\|AWI92489.1\|459602_460796_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.36769e-47
CP029166.1\|AWI92485.1\|454618_455197_+\|xanthine-phosphoribosyltransferase	gnl\|CDD\|181705	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated.	9.01486e-119
CP029166.1\|AWI92478.1\|447559_448129_-\|peroxiredoxin	gnl\|CDD\|211789	TIGR03137, AhpC, peroxiredoxin. This peroxiredoxin (AhpC, alkylhydroperoxide reductase subunit C) is one subunit of a two-subunit complex with subunit F(TIGR03140). Usually these are found as an apparent operon. The gene has been characterized in Bacteroides fragilis, where it is important in oxidative stress defense. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue. [Cellular processes, Detoxification, Cellular processes, Adaptations to atypical conditions].	1.50623e-124
CP029166.1\|AWI92475.1\|444949_445576_-\|NDxxF-motif-lipoprotein	gnl\|CDD\|380196	NF033193, lipo_NDxxF, NDxxF motif lipoprotein. Members of this family are lipoproteins, about 200 amino acids long in precursor form, found in Staphylococcus aureus, Bacillus cereus, and various other Firmicutes. The protein family is named for one of its several highly conserved motifs.	1.67126e-71
CP029166.1\|AWI92487.1\|456502_457969_+\|IMP-dehydrogenase	gnl\|CDD\|235507	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed.	0
CP029166.1\|AWI92491.1\|461520_461751_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378900	pfam12645, HTH_16, Helix-turn-helix domain. This domain appears to be a helix-turn-helix domain suggesting that this might be a transcriptional regulatory protein. Some members of this family are annotated as conjugative transposon domains.	2.04673e-25
CP029166.1\|AWI92482.1\|451831_452776_-\|hypothetical-protein	gnl\|CDD\|235334	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional.	0.000526947

>CP029166.1|AWI92481.1|451248_451506_-|hypothetical-protein
MLVTDESHKCTLIFTFTTNAFLLKQKYLFTVAFELPPAHTNTQKMLILIRQNFLQRVCSKRLFKVDHLLSFHSINMRLAIFIKPP
>CP029166.1|AWI92480.1|450939_451041_+|hypothetical-protein
MQLNVNMMKFDRWHKGICKQIVLNSVVIGGKGK
>CP029166.1|AWI92479.1|449466_450855_-|L-cystine-transporter
MNAFLTLINIIVLVIFIVILHMMARKHISFAKRVFTALGIGIVFGVLLHLIYGTHSNVITSTSDWFNIVGQGYVALLQMIVMPLIFISIVAAFTKIQIGEKFAKIGSLIFIFLIGTVTIAAIVGVVYALVFGLDASTINLGNAEQARGSEIAKQAKDLTAHTLPQQILELLPKNPFLDFTGQRATSTIAVVIFASFIGFAYLRVARKQPDHGELLKRAIDAIYSLVMAIVTFVLRLTPYGVLAIMANTLSTSDFGAIWTLGKFLIASYAALITMYIIHLIILSLLGISPIRYVKKTLEVLIFAFTSRSSAGALPLNVQTQTRRLGVPEGIANFAATFGLSIGQNGCAGIYPAMLAIMVAPVANVEIDLQFIVTLIAVVIISSFGVAGVGGGATFASILVLSTLNLPVALAGVLISVEPLIDMGRTALNVNDSMLAGTGTAKLTKHWDKDTFDSNDNAALTSH
>CP029166.1|AWI92478.1|447559_448129_-|peroxiredoxin
MSLINKEILPFTAQAFDPKKDQFKEVTQEDLKGSWSVVCFYPADFSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAWHDHSDAISKITYTMIGDPSQTITRNFDVLDEATGLAQRGTFIIDPDGVVQASEINADGIGRDASTLAHKIKAAQYVRKNPGEVCPAKWEEGAKTLQPGLDLVGKI
>CP029166.1|AWI92477.1|446020_447544_-|alkyl-hydroperoxide-reductase-subunit-F
MLNADLKQQLKQLLELMEGNVEFVASLGSDDKSKELKDLLTEITDMSPRLSLSEKSLKRTPSFSVNRPGEETGVTFAGIPLGHEFNSLVLAILQVSGRAPKEKQSIIDQIKKLEGSFHFETFISLTCQKCPDVVQALNLMSVINPNITHSMIDGTVFREESENIMAVPAVFLNGEEFGNGRMTIQDILSKLGSTADASEFENKEPYDVLIVGGGPASGSAAIYTARKGLRTGIVADRIGGQVNDTAGIENFITVKETTGSEFSSNLAAHIDQYDIDAMTGIRATDIEKTDEAIKVTLENGAVLESKTVIIATGAGWRKLNIPGEEQLINKGVAFCPHCDGPLFENKDVAVIGGGNSGVEAAIDLAGIVNHVTLFEFASELKADNVLQDRLRSLSNVDIKTNAKTTEVVGEDHVTGIRYEDMNTGEEHLLNLDGIFVQIGLLPNTSWLNDAVELNERGEIVIDRNNNTNVPGIFAAGDVTDQKNKQIIISMGAGANAALNAFDYIIRN
>CP029166.1|AWI92476.1|445648_445942_-|hypothetical-protein
MINLIYTTRCAIMLKVCTSRKQINMKNDIEKEKYVNEIIMLLRTIPTSKLVQPIMQLFIDKAILNNVQNDALLIEKATHARNHLRLWSLQGHRDIPN
>CP029166.1|AWI92475.1|444949_445576_-|NDxxF-motif-lipoprotein
MKKRLLLSTFLASTLILTGCASDQSDNEDHHTSTGIHAPKSAKKLETKDIFNSDKKNSDISDAEMKQAIEKYLSVNSDILDNKYIMQHKLDKQIDSQTKVTEKQAETLSHLSNLAVKNDLHFKKFVTENNIPKEYKKPVELMMNYFKALNSTIANVDEDIEKLSYQPQNKINVVDVPTKYAGDVNKKQQDKIKDFLKSKGIKSDVIDK
>CP029166.1|AWI92474.1|444311_444695_-|hypothetical-protein
MKVRITFIILAILSTIVCLFLAAMHPTGPNTVTFEQPYLFTLNIIIMVLVALPSLVLAIYDYMSFRISSAILQFLGAISWFFLSLILSLTQFTPFTLASFITSIILFTSTIITLAIGGKSVEKNDSP
>CP029166.1|AWI92473.1|443664_444246_+|histidine-phosphatase-family-protein
MTIYLVRHGESKSNYDNKHFRSYFCGQLDVPLTDTGTKSADDLCDYFKEKQIKHVYVSDLLRTQQTFEHIFPYDIASTTTPLLRERSLGVFEGEYKDEISANPKYEKYFNDPNFKDFRHSFSQKAPEGESYEDVYQRVEHFMNHVVNEDTQKDDIVIVAHQVVIRCLMVYFNKVSRAEAVDLKVENCKPYIIE
>CP029166.1|AWI92472.1|443277_443487_-|hypothetical-protein
MTTQSFIFMNIILLDGATQRHPFFICQILAFLFPKFPHINLLLFNPILSTFSNIIIHIDHFHANKKDDN
>CP029166.1|AWI92482.1|451831_452776_-|hypothetical-protein
MLTKEFAQRVELSEKQVRKIVQHLEERGYQLSKTEYRGREATDFKEEDIELFKDIADKVKQTNSYDLAFDELEKEKDFLQVIVKNDDKNLPTNQNVAQLVEDLRLEIQKMREERHLLGQMMNQVHQQQQELKELQNQLTSKIDSNSESLKAIQTSQEAIQEAQASQAKALAESTNKVEKNAVTEDKADSKDSKVAGVNTSTDAKTDTKAENAGDGTATKVDKEDQISATEAIEKASVEQSKNDNAAETSNKEATVDAEAQHDAEQQVAEASKQATSNDSLEAKAENDSTASQSEMSEPKPQEEKKGFFARLFNL
>CP029166.1|AWI92483.1|452893_453556_-|hypothetical-protein
MEFKTIQSVKDPHYNEALKLYDTKLNLSLTEDKRIIKRSLENNKTENDYVFIVGLENDVVVSLATAHYEATTNSAFLIYLFAKDLPNHDELMTQTLHQIEHELNLLSNLVHSRSINFLMMEVPKEPADLTQDNGLIIEHRRQFLYEHQFERQTEIDYIHPTNDGHTKKVDLFLKKNIKLTKDIYGTSVKSNYILKYVFANGIAREIIYALLEEMDLRKPF
>CP029166.1|AWI92484.1|453698_454106_-|hypothetical-protein
MADITVVNDTGELYNVINQKKSEGYLESELTIISKSKLHLNDLHDSEISLISTSGTFSDRMTKLLTGEDGEHAVLSRYNLAPDELEKYKQLILDDKMLVVAVRDKSSHQEVHENNSAYEEIDITHFAEASKGPKA
>CP029166.1|AWI92485.1|454618_455197_+|xanthine-phosphoribosyltransferase
MELLGQKVKEDGVVIDEKILKVDGFLNHQIDAKLMNEVGRTFYEQFKDKGITKILTIEASGIAPAIMAALHFDVPCLFAKKAKPSTLTDGYYETSIHSFTKNKTSTVIVSKEFLSEEDTVLIIDDFLANGDASLGLYDIAQQANAKTAGIGIVVEKSFQNGHQRLEEAGLTVSSLCKVASLEGNKVTLVGEE
>CP029166.1|AWI92486.1|455196_456465_+|purine-permease
MKNLILSVQHLLAMYAGAILVPIIVGTSLKFTPEQIAYLVTVDIFMCGVATFLQANKVTGTGLPIVLGCTFTAVAPMILIGQTKGIDVLYGSLFLSGILVIIIAPFFSHLVKFFPPVVTGSVVTIIGINLMPVAMNYLAGGQGAKDYGDVKNILLGLMTLIIILLLQRFTTGFIKSIAILIGLVLGTIGAGLLGMVDINQVNHAGWLGIPVPFRFSGFSFDVTSTLVFFIVAIVSLIESTGVYHALSEITGKKLERKDFRKGYTAEGLAIVLGSIFNSFPYTAYSQNVGLVSLSGAKKNNVIYGMVVLLLICGCIPKLGALANIIPLPVLGGAMIAMFGMVMAYGVSILGHIDFKNQNNLLIIAVSVGLGTGISAVPQAFKGLGEQFAWLTQNGIVLGAISAIILNFFFNGIKYKQTEENVK
>CP029166.1|AWI92487.1|456502_457969_+|IMP-dehydrogenase
MWESKFAKESLTFDDVLLIPAQSDILPKDVDLSVQLSDKVKLNIPVISAGMDTVTESKMAIAMARQGGLGVIHKNMGVEEQADEVQKVKRSENGVISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRDLRFIEDFSIKIVDVMTQENLITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVIEFPNAAKDEHGRLLVAAAIGISKDTDIRAQKLVEAGVDVLVIDTAHGHSKGVIDQVKHIKKTYPEITLVAGNVATAEATKDLFEAGADIVKVGIGPGSICTTRVVAGVGVPQITAIYDCATEARKHGKAIIADGGIKFSGDIIKALAAGGHAVMLGSLLAGTEESPGATEIFQGRQYKVYRGMGSLGAMEKGSNDRYFQEDKAPKKFVPEGIEGRTAYKGALQDTIYQLMGGVRAGMGYTGSHDLRELREEAQFTRMGPAGLAESHPHNIQITKESPNYSF
>CP029166.1|AWI92488.1|457993_459535_+|GMP-synthase-(glutamine-hydrolyzing)
MEMAKEQELILVLDFGSQYNQLITRRIREMGVYSELHDHEISIEEIKKMNPKGIILSGGPNSVYEEGSFTIDPEIYNLGIPVLGICYGMQLTTKLLGGKVERANEREYGKAIINAKSDELFAGLPAEQTVWMSHSDKVIEIPEGFEVIADSPSTDYAAIEDKKRRIYGVQFHPEVRHTEYGNDLLNNFVRRVCDCRGQWTMENFIEIEIEKIRQRVGDRRVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDMVMEQFGEGFNMNIIRVNAKDRFMNKLKGVSDPEQKRKIIGNEFVYVFDDEASKLKGVDFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRKLGIELGIPEHLVWRQPFPGPGLGIRVLGEITEDKLEIVRESDAILRQVIREEGLEREIWQYFTVLPNIQSVGVMGDYRTYDHTVGIRAVTSIDGMTSDFARIDWEVLQKISSRIVNEVDHVNRVVYDITSKPPSTIEWE
>CP029166.1|AWI92489.1|459602_460796_-|site-specific-integrase
MVKDPIKKAKNGTYYFRANLGYDSKGKKIQKYRSGFTTKKEAREEYSKLLLMKPEELSENKDKMTFKHYIFEIFLPWYKTQVKLRTYENRLPTIKKHFSYFDKMAVSDIEPIDVQNWQLKLSKKCKSSYVRAVQGLFSVAMDRAIVLGITTTNPSKIIGNVKKQKSKIEFWTKEEFEKVISLIYKEDYYQHFLFISLWFLFMTGMRIGEATAIQWEDIDFDSGVLTINKTLYYKNQSNYRFVEPKTKASVRHIVLDKCTLTYLSEWKEVQQNLIQTDFVMSYNGIPTQKHTLSYAIERYAKLAGIHRIRIHGLRHSHASLLISMGENPLIIKDRLGHEDIETTLGTYGHLYPNSNFEVANKLNGAISFKEAKQNYDTSPKNQFTVDYLRNKEMKKVQ
>CP029166.1|AWI92490.1|460822_461023_-|DUF3173-domain-containing-protein
MITVTKKDLVELGYGTSFSADIIKKAKELMITKGHIYYQSRKLDRVPREAVEEILGIRFSNENRSE
>CP029166.1|AWI92491.1|461520_461751_-|helix-turn-helix-domain-containing-protein
MKTAYPRVPFPLIVKATDGDVEAINQIVKHYRGYTSKRSLRRMTDEYGNSHMVIDETLRGRMETKLISKILSFEIK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP029166_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029166_2

724743-724835

Orphan

Consensus_repeat	Method
CTAAAGGTGAAGAGGAACGCAGTTGGATGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029166_2

>merge|CP029166|2|724743-724835|CRISPRCasFinder
CTAAAGGTGAAGAGGAACGCAGTTGGATGCTAAGGCACAACTGCATAAAAGCCTCTAATCGCTAAAGATGAAGAGGAACGCAGTTGGATGCTA

>CP029166|2|2|724743-724835|CRISPRCasFinder
CTAAAGGTGAAGAGGAACGCAGTTGGATGCTA	AGGCACAACTGCATAAAAGCCTCTAATCG
CTAAAGATGAAGAGGAACGCAGTTGGATGCTA

Protein	Signature genes	Signature genes Name	Protein_function
CP029166.1\|AWI92731.1\|727646_728447_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
CP029166.1\|AWI92724.1\|719121_719643_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378039
CP029166.1\|AWI92729.1\|723889_724525_+\|endonuclease-III-domain-containing-protein	unknown	unknown	gnl\|CDD\|225140
CP029166.1\|AWI92728.1\|723445_723754_-\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI92722.1\|717282_717759_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP029166.1\|AWI92721.1\|716577_717114_+\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
CP029166.1\|AWI92735.1\|731174_731549_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|130944
CP029166.1\|AWI94908.1\|721459_721843_+\|DUF1934-domain-containing-protein	unknown	unknown	gnl\|CDD\|226896
CP029166.1\|AWI94910.1\|725938_726889_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
CP029166.1\|AWI92736.1\|732496_733426_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225778
CP029166.1\|AWI92726.1\|721226_721334_+\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI92725.1\|720141_721152_+\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|181842
CP029166.1\|AWI92734.1\|730135_730924_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
CP029166.1\|AWI92730.1\|726943_727663_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223943
CP029166.1\|AWI92732.1\|728582_729089_+\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI92737.1\|733620_733845_-\|DUF2922-domain-containing-protein	unknown	unknown	gnl\|CDD\|378571
CP029166.1\|AWI92733.1\|729250_729967_+\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI92727.1\|721839_723501_+\|arginine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234964
CP029166.1\|AWI94909.1\|724963_725791_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238563
CP029166.1\|AWI92723.1\|717798_719094_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224004

Protein	Function_ID	Function_description	E-value
CP029166.1\|AWI92724.1\|719121_719643_+\|hypothetical-protein	gnl\|CDD\|378039	pfam08741, YwhD, YwhD family. This family of proteins are currently uncharacterized. They are around 170 amino acids in length.	8.7406e-98
CP029166.1\|AWI92729.1\|723889_724525_+\|endonuclease-III-domain-containing-protein	gnl\|CDD\|225140	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair].	3.98158e-90
CP029166.1\|AWI92731.1\|727646_728447_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	7.17592e-26
CP029166.1\|AWI92722.1\|717282_717759_+\|N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.13315e-11
CP029166.1\|AWI92721.1\|716577_717114_+\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	3.16348e-26
CP029166.1\|AWI92735.1\|731174_731549_-\|transcriptional-regulator	gnl\|CDD\|130944	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family. This model represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis. Some members contain two tandem copies of this region. This family is related to the MarR transcriptional regulator family described by pfam01047. [Regulatory functions, DNA interactions].	1.77309e-26
CP029166.1\|AWI94908.1\|721459_721843_+\|DUF1934-domain-containing-protein	gnl\|CDD\|226896	COG4506, COG4506, Uncharacterized protein conserved in bacteria [Function unknown].	9.50091e-54
CP029166.1\|AWI94910.1\|725938_726889_+\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	3.69161e-48
CP029166.1\|AWI92736.1\|732496_733426_-\|hypothetical-protein	gnl\|CDD\|225778	COG3238, COG3238, Uncharacterized protein conserved in bacteria [Function unknown].	7.93315e-37
CP029166.1\|AWI92730.1\|726943_727663_+\|HAD-family-hydrolase	gnl\|CDD\|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	3.6864e-38
CP029166.1\|AWI92725.1\|720141_721152_+\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|181842	PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional.	0
CP029166.1\|AWI92734.1\|730135_730924_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.55978e-34
CP029166.1\|AWI92737.1\|733620_733845_-\|DUF2922-domain-containing-protein	gnl\|CDD\|378571	pfam11148, DUF2922, Protein of unknown function (DUF2922). This bacterial family of proteins has no known function.	1.74707e-13
CP029166.1\|AWI92727.1\|721839_723501_+\|arginine--tRNA-ligase	gnl\|CDD\|234964	PRK01611, argS, arginyl-tRNA synthetase; Reviewed.	0
CP029166.1\|AWI94909.1\|724963_725791_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238563	cd01143, YvrC, Periplasmic binding protein YvrC. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria and archaea. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.	1.32108e-72
CP029166.1\|AWI92723.1\|717798_719094_+\|HD-domain-containing-protein	gnl\|CDD\|224004	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only].	1.70707e-150

>CP029166.1|AWI92729.1|723889_724525_+|endonuclease-III-domain-containing-protein
MLGTDELYKVLYEHLGPQFWWPADNDIEMMLGAILVQNTRWRNAEIALNQIKEHTHFNPNHILELPIETLQSLIHSSGFYKSKSLTIKTLLTWLARHHFNYQEINERYKGGLRKELLSLKGIGSETADVLLVYIFGRIEFIPDSYTRKIYDKLGYENTKNYDQLKKVVTLPNHFTNQDANEFHALLDVFGKHYFRDKDIKNYDFLEPYFKK
>CP029166.1|AWI92728.1|723445_723754_-|hypothetical-protein
MTRIEKSLLQANFRSVNYCHYNFVEHRTLIYVSGSLMQLCRASNCVPLNLIHILSIPQYVTYLKKTLQHKVSFEKLYVGVYINVLTLIQVRLHRPLPMHFSM
>CP029166.1|AWI92727.1|721839_723501_+|arginine--tRNA-ligase
MNIIDQVKQTLVEEIAASINKAGLADEIPDIKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKHPEIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLYEKGEILEVLAKMKELGYTYEADGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAEKVLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM
>CP029166.1|AWI94908.1|721459_721843_+|DUF1934-domain-containing-protein
MLKQHNEKEKFEFTTEGTWQQRQSNFIRYVEQIEDATVNVTIKVDDDSVKLIRKGDINMNLHFVEGQTTTTFYDISAGRIPLEVKTLRILHFVSGDGGKLKIHYELYQDNEKMGSYQYEINYKEIGE
>CP029166.1|AWI92726.1|721226_721334_+|hypothetical-protein
MKDSENLVFFGFEVLFVFYKMAYIYEALIKYGIVN
>CP029166.1|AWI92725.1|720141_721152_+|alcohol-dehydrogenase-AdhP
MRAAVVTKDHKVSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFENCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKDVDPVAEVMKLTDNKGLDATVVTSVAKTPFNQAVDVVKAGARVVAVGLPVDKMNLDIPRLVLDGIEVVGSLVGTRQDLREAFEFAAENKVTPKVQLRKLEEINDIFEEMENGTITGRMVIKF
>CP029166.1|AWI92724.1|719121_719643_+|hypothetical-protein
MEVISLSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFIDIGGMHARAKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAGLTACYLLVNKAIRRGYKSMPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGMWKHSSDALHQAFN
>CP029166.1|AWI92723.1|717798_719094_+|HD-domain-containing-protein
MTNAYVDLKLVEEKVFKDPIHRYIHVEDQLIWDLIKTKEFQRLRRIRQLGTLYLSFHTAEHSRFGHSLGVYEIVRRLIDESFIGHDAWDNKDRPLALCAALLHDLGHGPFSHSFEKIFNTDHEAYTQAIITGDTEVNAVLRKVAPEFPREVAEVINKTHHNKLVISMISSQIDADRMDYLQRDAYFTGVSYGAFDMERILRLMRPSKDEVLIKESGMHAVENFIMSRYQMYWQIYFHPVSRGGEVLLNNCLKRAKQLYNEGYEFKLHPHDFIPFFEETVTIEQYVELDEAVVTYYLEKWTKEDDAILSDLASRFINRDLFKYIPFDGSIITISELQELFEAGGINPDYYFVSEAFSDLPYDYDRPGSNRKPIHLLRQDGTIREISNQSLVIHSITGINRQDYKLYYPREMVAKIKDKTIREAIENLINELN
>CP029166.1|AWI92722.1|717282_717759_+|N-acetyltransferase
MFKVRQATEKDVVQIRDVATKAWFNTYLNIYAATTVNHLLEASYNEHHLKKRLQEQLFLVVEEGNDIVGFANFIYGEELYLSAHYVKPESQHTGYGTALLNEGLSRFEDKFEGVYLEVDNKNEEAVAYYKEQGFTILRSYEPEMYGEKLDLALMYKAF
>CP029166.1|AWI92721.1|716577_717114_+|flavodoxin-family-protein
MITVLFGGSRPNGNTAQLTKFALQDLEYQWIDVTQHQFKPIRDVRHTAETITSYDDDYLPILDKILASDTIIFASPVYWYSISAPLKAFIEHWSETLQDKRYPNFKAQMAEKDFRVILVGGDCPKIKAKPAITQMKYSLDFLGATLNGYIIGTAEKPGDIMKDNYALARATEWNSILQ
>CP029166.1|AWI94909.1|724963_725791_+|ABC-transporter-substrate-binding-protein
MKDNDKQGSNDNGSSKSPYHRIVSLMPSNTEILYELGLGKYIVGVSTVDDYPKDVKKGKKQFDALNLNKEELLKAKPDLILAHESQKATANKVLSSLEKQGIKVVYVKDAQSIDETYNTFKQIGKLTHHDKQAEQLVEETKDNIDKVIDSIPAHHKKSKVFIEVSSKPEIYTAGKHTFFNDMLEKLEAQNVYSDINGWNPVTKESIIKKNPDILISTEAKTRSDYMDIIKKRGGFNKINAVKNTRIEVVNGDEVSRPGPRIDEGLKELRDAIYRK
>CP029166.1|AWI94910.1|725938_726889_+|iron-ABC-transporter-permease
MTFNKVLLSWIVILIITTSIYLFWQLGDINDVFNQSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGSGLALFLGLTTLWIPVFSITFSLITLITVLVITSVLSQGYPVRILILSGLMISALFNSLLYFLILLKPRKLNTIANYLFGGFGDAEYSNVSIIAITFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWQWKQSLGRQLALNIVTGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQSKRLH
>CP029166.1|AWI92730.1|726943_727663_+|HAD-family-hydrolase
MDLNQIKAVVFDLEGTLLDRVKSREKFIEEQYERFHDYLIHVQLADFKKAFIELDDDEDNDKPDLYKEIIKRFHVDRLTWKDLFNDFEMHFYRYVFPYYDTLYTLEKLSQKGFQIGVIANGKSKIKQFRLHSLGLMHVINYLSTSETVGFRKPHPKIFEDMIDQLGVLPEQIMYVGDDALNDVAPARAMGMVSVWYKQEDAEIEPLEEEVDFTITTVEELLTILPIKNDNKGENYGSIY
>CP029166.1|AWI92731.1|727646_728447_+|alpha/beta-hydrolase
MDLFTRKDGTSIHYSTLGEGYPIVLIHTVLDNYSVFNKLAAELAKSFQVVLIDLRGHGYSDKPRHIEIKDFSDDIVELLKYLYIEEVAFVCHEMGGIIGADISVRYPEFTSSLTLVNPTSIEGELPEERLFRKYAHIIRNWDPEKQDKFLNKRKYYRPRKMNRFLKHVVDTNEISTKEEIQAVKEVFKNADISQTYRNVVVPTKIIAGEFGERTTRLEAKEVADLIQNADFEVYQESSAFPFVEEQERFVEDTAAFINKHHDEKHV
>CP029166.1|AWI92732.1|728582_729089_+|hypothetical-protein
MKKLLTASIIACSVVMGVGLVNTSAEAASGNSIDTVKQLIKGDQSLENVKIGESIKDVLTKYKNPMYSYNEDGTEHYYEFHTKKGMLLVTTDGKKNNGKVTHISMMYNDANGPTYQAVKNYVGKAVTHTEYSKVAGNFGYIEKGKTTYQFASAPKDKNIKLYRIDLEK
>CP029166.1|AWI92733.1|729250_729967_+|hypothetical-protein
MRINDKILLENIEDYFNHKGLSPHLIDDIKEKVITDIKNSEKKDQDYIEYKRKSPAQIILMIQRNLFALQMNPVIFFIINFILISYLYDKQYVQFQAITGMSLFYCLVIFPMTIVVYLRVSQKNYLRSNKIEMIMGTIIAIISLLLIILQAFNITWGVIPITNFGHQFFFFIGIILVIAVIFYKRLEFSGIGLLFCQKTVDAMIHNPQSAQIFSLIIWILLVVLVIYFTIRLSSRTRL
>CP029166.1|AWI92734.1|730135_730924_+|alpha/beta-hydrolase
MNKVTINPQIQLTYQIEGKGDPIILLHGLDGNLAGFEDLQHQLASSYKVLTYDLRGHGKSSKSESYDLNDHVEDLKILMEKLNIHEAHILGHDLGGVVAKLFTDKYAYRVKSLTTIASKKDDLIHSFTQLLIQYQDDIAGFNKSEAYILLFSKLFRNQEKTMKWYQKQRIYSIKSEDDSAVAIRSLILHKDEPMYLKKRTCVPTLLINGEHDPLIKDKNHFKLEAHFLNVTKKIFEHSGHAPHIEEPEAFMNYYLKFLKSVS
>CP029166.1|AWI92735.1|731174_731549_-|transcriptional-regulator
MAITKINDCFELLSMVTYADKLKSLIKKEFSISFEEFAVLTYISENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIESLLSRVNKRITEANNEIEL
>CP029166.1|AWI92736.1|732496_733426_-|hypothetical-protein
MLLFYIIGVLVGMLIPIQTSVNSRLSLYTKSPFYTSFISFSVGTICLIILNIIINPEVFTIHFYNNQSFNYTWVVGGLLGVSFLTGNLLLLPKLGATLTVIATVAGQIIMGVIIDTFGLFGATIHDFNLIKAIGVLLLIVGIVIMNQFNKNNLLLTDQKYLLFWLLLGFIFGFFPPIQTTINSALASHTHSPAFASLVSFTIGSIALLILTAIFNRSLKLKTSHLKFGKLKPIYFTGGILGMAFVTANIILMPHMGAALTTLIGMFGQILMGILIDHFGLFGSPKIAMTSRKTIGLLCILTGIILLRLF
>CP029166.1|AWI92737.1|733620_733845_-|DUF2922-domain-containing-protein
MTKTLELSFKSSLDKPVKLQLPQLNNVVTEQVARDSMNALVDLNIIKSNSGTITKVHSAQIIDKTTTVLFEDKK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP029166_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029166_3

840754-840836

Orphan

Consensus_repeat	Method
CCAATTTCTACAGACAATGCAAGTTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029166_3

>merge|CP029166|3|840754-840836|CRISPRCasFinder
CCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGG

>CP029166|3|3|840754-840836|CRISPRCasFinder
CCAATTTCTACAGACAATGCAAGTTGG	CGGGGCCCCAACATAGAGAAATTGGAACG
CCAATTTCTACAGACAATGCAAGTTGG

Protein	Signature genes	Signature genes Name	Protein_function
CP029166.1\|AWI92835.1\|827354_827561_+\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI92847.1\|842292_842394_+\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI92842.1\|836899_838414_+\|glycine/betaine-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|270328
CP029166.1\|AWI92852.1\|846088_846355_+\|ribonucleoside-diphosphate-reductase	unknown	unknown	unknown
CP029166.1\|AWI92844.1\|840062_840605_+\|5'(3')-deoxyribonucleotidase	unknown	unknown	gnl\|CDD\|226895
CP029166.1\|AWI92848.1\|842471_843977_-\|peptide-MFS-transporter	unknown	unknown	gnl\|CDD\|225646
CP029166.1\|AWI92849.1\|844042_844288_-\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI92846.1\|841284_842202_-\|lipid-kinase	unknown	unknown	gnl\|CDD\|224513
CP029166.1\|AWI92854.1\|846865_848971_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|236069
CP029166.1\|AWI92840.1\|833926_835708_+\|DNA-helicase-RecQ	unknown	unknown	gnl\|CDD\|273594
CP029166.1\|AWI92837.1\|828342_829347_+\|allophanate-hydrolase-subunit-2-family-protein	unknown	unknown	gnl\|CDD\|224895
CP029166.1\|AWI92850.1\|844317_844818_-\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	unknown	unknown	gnl\|CDD\|223851
CP029166.1\|AWI92851.1\|844837_845704_-\|EamA/RhaT-family-transporter	unknown	unknown	gnl\|CDD\|223769
CP029166.1\|AWI92855.1\|849088_850060_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|275027
CP029166.1\|AWI92853.1\|846504_846903_+\|protein-NrdI	unknown	unknown	gnl\|CDD\|224694
CP029166.1\|AWI92839.1\|832031_833915_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223562
CP029166.1\|AWI92836.1\|827648_828359_+\|allophanate-hydrolase	unknown	unknown	gnl\|CDD\|224960
CP029166.1\|AWI92843.1\|838653_839712_+\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235106
CP029166.1\|AWI92838.1\|829820_831761_+\|LTA-synthase-family-protein	unknown	unknown	gnl\|CDD\|224287
CP029166.1\|AWI92841.1\|835929_836907_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224050

Protein	Function_ID	Function_description	E-value
CP029166.1\|AWI92848.1\|842471_843977_-\|peptide-MFS-transporter	gnl\|CDD\|225646	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism].	1.22605e-172
CP029166.1\|AWI92842.1\|836899_838414_+\|glycine/betaine-ABC-transporter-permease	gnl\|CDD\|270328	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold. Osmoprotectant binding lipoprotein ChoS of Lactococcus lactis is predicted to be involved in uptake of compatible solutes such as choline and glycine betaine, but the relative substrate preference is not known. To counteract the efflux of water, microorganisms accumulate the compatible solutes for a sustained adjustment to high osmolarity surroundings. ChoS belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.03165e-152
CP029166.1\|AWI92855.1\|849088_850060_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	gnl\|CDD\|275027	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit. Members of this family are NrdF, the beta subunit of class 1b ribonucleotide reductase. This form uses a dimanganese moiety associated with a tyrosine radical to reduce the cellular requirement for iron. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	2.30551e-164
CP029166.1\|AWI92844.1\|840062_840605_+\|5'(3')-deoxyribonucleotidase	gnl\|CDD\|226895	COG4502, COG4502, 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism].	1.15481e-107
CP029166.1\|AWI92846.1\|841284_842202_-\|lipid-kinase	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	3.10512e-78
CP029166.1\|AWI92854.1\|846865_848971_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|236069	PRK07632, PRK07632, ribonucleotide-diphosphate reductase subunit alpha; Validated.	0
CP029166.1\|AWI92840.1\|833926_835708_+\|DNA-helicase-RecQ	gnl\|CDD\|273594	TIGR01389, recQ, ATP-dependent DNA helicase RecQ. The ATP-dependent DNA helicase RecQ of E. coli is about 600 residues long. This model represents bacterial proteins with a high degree of similarity in domain architecture and in primary sequence to E. coli RecQ. The model excludes eukaryotic and archaeal proteins with RecQ-like regions, as well as more distantly related bacterial helicases related to RecQ. [DNA metabolism, DNA replication, recombination, and repair].	0
CP029166.1\|AWI92837.1\|828342_829347_+\|allophanate-hydrolase-subunit-2-family-protein	gnl\|CDD\|224895	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism].	1.25641e-144
CP029166.1\|AWI92850.1\|844317_844818_-\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	gnl\|CDD\|223851	COG0780, COG0780, Enzyme related to GTP cyclohydrolase I [General function prediction only].	7.91282e-79
CP029166.1\|AWI92851.1\|844837_845704_-\|EamA/RhaT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	3.8323e-10
CP029166.1\|AWI92853.1\|846504_846903_+\|protein-NrdI	gnl\|CDD\|224694	COG1780, NrdI, Protein involved in ribonucleotide reduction [Nucleotide transport and metabolism].	5.52807e-56
CP029166.1\|AWI92839.1\|832031_833915_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	0
CP029166.1\|AWI92836.1\|827648_828359_+\|allophanate-hydrolase	gnl\|CDD\|224960	COG2049, DUR1, Allophanate hydrolase subunit 1 [Amino acid transport and metabolism].	1.29969e-94
CP029166.1\|AWI92843.1\|838653_839712_+\|histidinol-phosphate-transaminase	gnl\|CDD\|235106	PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional.	0
CP029166.1\|AWI92838.1\|829820_831761_+\|LTA-synthase-family-protein	gnl\|CDD\|224287	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane].	0
CP029166.1\|AWI92841.1\|835929_836907_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224050	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].	4.80291e-155

>CP029166.1|AWI92844.1|840062_840605_+|5'(3')-deoxyribonucleotidase
MTRKSIAIDMDEVLADTLGEIIDAVNFRADLGIKMEALNGQKLKHVIPEHDGLITEVLREPGFFRHLKVMPYAQEVVKKLTEHYDVYIATAAMDVPTSFSDKYEWLLEFFPFLDPQHFVFCGRKNIVKADYLIDDNPRQLEIFTGTPIMFTAVHNINDDRFERVNSWKDVEQYFLDNIEK
>CP029166.1|AWI92843.1|838653_839712_+|histidinol-phosphate-transaminase
MKEQLNQLSAYQPGLSPRALKEKYGIEGDLYKLASNENLYGPSPKVKEAISAHLDELYYYPETGSPTLKAAISKHLNVDQSRILFGAGLDEVILMISRAVLTPGDTIVTSEATFGQYYHNAIVESANVIQVPLKDGGFDLEGILKEVNEDTSLVWLCNPNNPTGTYFNHESLDSFLSQVPPHVPVIIDEAYFEFVTAEDYPDTLALQQKYDNAFLLRTFSKAYGLAGLRVGYVVASEHAIEKWNIIRPPFNVTRISEYAAVAALEDQQYLKEVTHKNSVERERFYQLPQSEYFLPSQTNFIFVKTKRVNELYEALLNVGCITRPFPTGVRITIGFKEQNDKMLEVLSNFKYE
>CP029166.1|AWI92842.1|836899_838414_+|glycine/betaine-ABC-transporter-permease
MTNFFDILSERKGQLFSTMIEHIQISFIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIGRVPAIIALVVYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGVRTAMVLIIGTATLAALIGAGGLGDLILLGIDRNNASLILLGAIPAALLAIIFDLILRFMAKLSYKKLLMTLGVIVMIIILAIAIPMFAQKGDKITLAGKLGSEPSIITNMYKILIEEETKNTVEVKDGMGKTAFLFNALKSDDIDGYLEFTGTVLGELTKEPLKSKEEKKVYEQAKQSLEKKYQMTMLKPMKYNNTYALAVKRDFAKQHNIRTIGDLNKVKDQLKPGFTLEFNDRPDGYKAVQKAYNLNLDNIRTMEPKLRYQAINKGNINLIDAYSTDAELKQYDMVVLKDDKHVFPPYQGAPLFKESFLKKHPEIKKPLNKLENKISDEDMQMMNYKVTVKNEDPYTVAKDYLKAKGLIK
>CP029166.1|AWI92841.1|835929_836907_+|ABC-transporter-ATP-binding-protein
MIKFKNVTKRYGKHVAVDNISFNINEGEFFVLIGPSGCGKTTTLKMINRLIHLSEGYIYFKDKPISDYPVYEMRWDIGYVLQQIALFPHMTIKENIAQVPQMKKWKEKDIDKRVDELLEMVGLEPEKYKNRKPDELSGGQRQRVGVIRALAADPPVILMDEPFSALDPISREKLQDDLIELQTKIKKTIIFVTHDIQEAMKLGDKICLLNEGHIEQIDTPEGFKNNPQSEFVKQFMGSHLEDDAPCVEENAIIRDLDIMKPIDEVTSMSAYPIVYDNQPIEVLYQLLSESERVIVMQEDSVGQYVIDRKDIFKYLSQKKEVAQHD
>CP029166.1|AWI92840.1|833926_835708_+|DNA-helicase-RecQ
MMQQTLSHYFGYETFRPGQEEIISKVLDHRNVLGVLPTGGGKSICYQVPGLLLGGTTIVISPLISLMKDQVDQLKAMGIQAAFLNSSLTQKEQQRIEKALSNGEIQFLYVAPERFENRYFLNMLQRIKIHLVAFDEAHCISKWGHDFRPSYQNVISKVFTLPQDFTIIALTATATVEVQQDIREKLNIAQTDQIKTSTKRRNLIFKVNPTYQRQKFILDYIKTHDEDAGIIYCSTRKQVEELQEALESQKIESVIYHAGLSNKEREEAQNDFLFDRVKVVVATNAFGMGIDKSNVRFVIHYNMPGDLESYYQEAGRAGRDGLKSECILLFSERDINLHEYFITVSQADDDYKDKMGEKLTKMIQYTKTKKCLEATIVHYFEPNEKLEECEQCSNCVQQDKSYNMTQEAKMIISCIARMKQQESYSVIIQVLRGESTDYIKYKGYDQISTHGLMKGYTTSELSHLIDELRFKGFLNENDEILMCDTSIKKLLSNEVEVFTTPFKQKATEKVFINTVEGVDRVLFSQLVEVRKKLSDKLTIAPVSIFSDYTLEEFAKRKPASKQDMINIDGVGSYKLKHYCPAFLETIQNYKAKV
>CP029166.1|AWI92839.1|832031_833915_+|ABC-transporter-ATP-binding-protein
MGMEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTANVMHPNQYRIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFKRMMDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKELSGGQQKRVVLAKTLIEQPDLLLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGNYESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQQYKDDKGELNLAYSRLGKQVFELEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKTTLLNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIRMIDYLREENEIAKEKDGTSVSITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTILEDYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKSTLKQQSKSSTTVRKKNGLSYKEKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELNEEKEQLEIQYDLDITRWSELEEIKEQQ
>CP029166.1|AWI92838.1|829820_831761_+|LTA-synthase-family-protein
MSSQKKKISLFAFFLLTVITITLKTYFSYYVDFSLGVKGLVQNLILLMNPYSLVALVLSVFLFFKGKKAFWFMFIGGFLLTFLLYANVVYFRFFSDFLTFSTLNQVGNVESMGGAVSASFKWYDFVYFIDTLVYLFILIFKTKWLDTKAFSKKFVPVVMAASVALFFLNLAFAETDRPELLTRTFDHKYLVKYLGPYNFTVYDGVKTIENNQQKALASEDDLTKVLNYTKQRQTEPNPEYYGVAKKKNIIKIHLESFQTFLINKKVNGKEVTPFLNKLSSGKEQFTYFPNFFHQTGQGKTSDSEFTMDNSLYGLPQGSAFSLKGDNTYQSLPAILDQKQGYKSDVMHGDYKTFWNRDQVYKHFGIDKFYDATYYDMSDKNVVNLGLKDKIFFKDSANYQAKMKSPFYSHLITLTNHYPFTLDEKDATIEKSNTGDATVDGYIQTARYLDEALEEYINDLKKKGLYDNSVIMIYGDHYGISENHNNAMEKLLGEKITPAKFTDLNRTGFWIKIPGKSGGINNEYAGQVDVMPTILHLAGIDTKNYLMFGTDLFSKGHNQVVPFRNGDFITKDYKYVNGKIYSNKNNELITTQPADFEKNKKQVEKDLEMSDNALNGDLFRFYKNPDFKKVNPSKYKYETGPKANSKK
>CP029166.1|AWI92837.1|828342_829347_+|allophanate-hydrolase-subunit-2-family-protein
MSIIIEKSGLFSSFQDFGRRGYEHDGVIPCGALDTLAHEIANRLVANDKNEATLEMTNKMATIRFTEPTLIALAGGNVKAYTEHMTISPYKLYLLDKGDVLKFRETSYTSRVYLAVGGGFELDAWLGSNSTDFNVKIGGFKGRTLQDGDEIKLKRDYTARHHKLFENLAHTKQTDWGIDGYALSFNYMSDVFHVVKNKGTEDFKEDAIQRFVKHDYKVTSKANRMGMMLEGEKIKAFYEDMPPYQTVKKGTIQIKRDGTPIILLNDHYTLGSYPQIGTIASYHLTKLAQKPQGSRLKFQFIDILTAEKNLVKYSNWLNQLFHGIEYRMQLEMMK
>CP029166.1|AWI92836.1|827648_828359_+|allophanate-hydrolase
MKIYSQGDQAIVVAIEKEVSKSLTEDLLTLRSYLIEQNYPFIIEIVPSESDMMIVYDARDMIKHHNIQSPFLYMKALIESIHLNIKHDFNQQDLIEIPIVYGSKYGPDLESLLKHYKIKLETFIELHSKAQYFVSMMGYSPGFPYLTGLNKKLYINHTSKQKKFIPAGSVVLEGKKCGIVTTDTINDWLVIGYTPLSLFNPKESDFARLKLGDNIKFRPINENELEVGAFKDVNHN
>CP029166.1|AWI92835.1|827354_827561_+|hypothetical-protein
MIIVYIVLLLILVYVNYRLVNRLLSENRIYVVRLIATITTVISFILVYALIHELMPFVVRAMDLMYHQ
>CP029166.1|AWI92846.1|841284_842202_-|lipid-kinase
MENKYTHGVLFYHEHSGLKNINQGIGEVTTALSSICKHLSIQLSENEGDIIKYCQEIKTKNYAKDVDILFILGGDGTVNELINGVMTHDLQLPIGILPGGTFNDFTKTLNIAPNHKQASEQMISAQVGTYDVIKINNQYALNFVGLGLIVQNAENVQDGSKDIFGKLSYIGSTVKTLLNPTQFNYQLSIDDKTYSGETTMILTANGPFIGGSRIPLTDLSPQDGELNTFIFNEQSFSILNDIFKKRDSMNWNEITQGIEHIPGKKISLTTDPAMKVDIDGEISLETPIDIEVIPNAIQLLTVNDL
>CP029166.1|AWI92847.1|842292_842394_+|hypothetical-protein
MVINEIDFYRVGRENIVIAVYNEHIKFLFILIS
>CP029166.1|AWI92848.1|842471_843977_-|peptide-MFS-transporter
MTQQNSHGNQIQDIPQTGFFGHPRGLGVLFFVEFWERFSYYGMRALLIFYMYFAVTDNGLGIDKTTAMSIMSVYGSLIYMTSIPGGWIADRITGTRGATLLGAVFIIIGHICLSLPFALIGLFTSMFFIIIGSGLMKPNISNIVGRLYPENDRRMDAGFVIFYMSVNMGALLSPIILQHFVNVKNFHGGFLIAAVGMALGLVWYVLFNRKNLGSVGMKPTNPLTPAEKKKYGLIIGSVVLAIVLIIVIGALTNSLSFNLVSNTVLVLGIALPIIYFTLIIRSKDVTDTERSRVKAFIPLFILGMVFWAIQEQGSNVLNIYGIEHSDMKLNLFGWKTNFGEAIFQSINPLFILLLAPIISLLWQKLGTKQPSLPVKFAIGTFLAGASYILIGIVGYASGSSNFSVNWVILSYIICVIGELCLSPTGNSAAVKLAPKAFNAQMMSIWYLTNASAQAINGTLVKLIEPLGQTNYFIFLGVVAIIVTTIVLAFSPLIIKAMKGIR
>CP029166.1|AWI92849.1|844042_844288_-|hypothetical-protein
MIFLTYWCVFHLAYIIGYIKITFYTKVHQKNISTRIKQHFYRNLLHFNVNKYIFILSLINCARLITEYSQYFYFFVICWNI
>CP029166.1|AWI92850.1|844317_844818_-|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF
MAHGRQQDELQDITLLGNQDNTYNFDYRPDVLESFDNKHQGRDYFVKFNCPEFTSLCPITGQPDFATIYISYIPNVKMVESKSLKLYLFSFRNHGDFHEDCMNIIMNDLIELMDPHYIEVWGKFTPRGGISIDPYTNYGRPNSKYEKMAEHRLMNHDLYPEKIDNR
>CP029166.1|AWI92851.1|844837_845704_-|EamA/RhaT-family-transporter
MNPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFIYKYHQPMFGRLSSQPLLITRSTLGLIGVLLNIYAIDHMVLSDADSLMKLNPFWTILLSIVFLHEKVRKYQITAMIIAILGMLLIVKPEFSSSMIPSLAGLFSGIFAASAYTCVRALSTREAPYTIVFYFSLFSVIVLIPFTAYTYEPMSQMQILYLLGAGLAAAVGQIGVTLAYSFAAAKDISIFTYASIIFTAILGFILFGESPDFYATLGYVVIIGASYYMFEKARRDAKIIKK
>CP029166.1|AWI92852.1|846088_846355_+|ribonucleoside-diphosphate-reductase
MCLMYNETHNIVLVKRKRHNILCFVCKCFIYEEITFKSNLTQKFNSYYQLIVIFLENVLSKWKISNDVNTTYSDFYTFNPYKLLFSQI
>CP029166.1|AWI92853.1|846504_846903_+|protein-NrdI
MKIIYFSFTGNVRRFIKRTELENTLEITAENCMEPVHEPFIIVTGTIGFGEVPEPVQSFLEVNHQYIRGVAASGNRNWGLNFAKAGRTISEEYNVPLLMKFELHGKNKDVIEFKNKVGNFNENHGREKVQSY
>CP029166.1|AWI92854.1|846865_848971_+|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha
MKTMEEKKYNHIELNNEVTKRREDGFFSLEKDQEALVAYLEEVKDKTIFFDTEIERLRYLVDNDFYFNVFDIYSEADLIEITDYAKSIPFNFASYMSASKFFKDYALKTNDKSQYLEDYNQHVAIVALYLANGNKAQAKQFISAMVEQRYQPATPTFLNAGRARRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIKGVAKGVLPIAKSLEGGFSYADQLGQRPGAGAVYLNIFHYDVEEFLDTKKVNADEDLRLSTISTGLIVPSKFFDLAKEGKDFYMFAPHTVKEEYGVTLDDIDLEKYYDDMVANPNVEKKKKNAREMLNLIAQTQLQSGYPYLMFKDNANRVHPNSNIGQIKMSNLCTEIFQLQETSIINDYGIEDEIKRDISCNLGSLNIVNVMESGKFRDSVHSGMDALTVVSDVANIQNAPGVRKANSELHSVGLGVMNLHGYLAKNKIGYESEEAKDFANIFFMMMNFYSIERSMEIAKERGIKYQDFEKSDYANGKYFEFYTTQEFEPQFEKVRELFDGMAIPTSEDWKKLQQDVEQYGLYHAYRLAIAPTQSISYVQNATSSVMPIVDQIERRTYGNAETFYPMPFLSPQTMWYYKSAFNTDQMKLIDLIATIQTHIDQGISTILYVNSEISTRELARLYVYAHYKGLKSLYYTRNKLLSVEECTSCSI
>CP029166.1|AWI92855.1|849088_850060_+|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta
MIAVNWNTQEDMTNMFWRQNISQMWVETEFKVSKDIASWKTLSEAEQDTFKKALAGLTGLDTHQADDGMPLVMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSETNYLLDEWVLEEPHLKYKSDKIVANYHKLWGKEASIYDQYMARVTSVFLETFLFFSGFYYPLYLAGQGKMTTSGEIIRKILLDESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYTKMLYDDLGITEDVLNYVKYNGNKALSNLGFEPYFEEREFNPIIENALDTTTKNHDFFSVKGDGYVLALNVEALQDDDFVFDNK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP029166_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029166_5

931042-931123

Orphan

Consensus_repeat	Method
CCCCAACTTGCATTGTCTGTAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029166_5

>merge|CP029166|5|931042-931123|CRISPRCasFinder
CCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAA

>CP029166|5|5|931042-931123|CRISPRCasFinder
CCCCAACTTGCATTGTCTGTAGAA	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT
CCCCAACTTGCATTGCCTGTAGAA

Protein	Signature genes	Signature genes Name	Protein_function
CP029166.1\|AWI92936.1\|929944_930058_+\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI92938.1\|931356_931470_+\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI92939.1\|931679_932066_+\|topiosmerase	unknown	unknown	gnl\|CDD\|224572
CP029166.1\|AWI92944.1\|935298_936519_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
CP029166.1\|AWI92929.1\|925571_926066_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|372596
CP029166.1\|AWI92940.1\|932058_932355_+\|thioredoxin	unknown	unknown	gnl\|CDD\|239245
CP029166.1\|AWI92937.1\|930059_930938_+\|DUF1963-domain-containing-protein	unknown	unknown	gnl\|CDD\|226395
CP029166.1\|AWI92941.1\|932603_933629_+\|methionine-import-ATP-binding-protein-MetN-2	unknown	unknown	gnl\|CDD\|224058
CP029166.1\|AWI92934.1\|928986_929343_+\|arsenate-reductase-family-protein	unknown	unknown	gnl\|CDD\|239334
CP029166.1\|AWI92928.1\|924799_925417_-\|amino-acid-transporter	unknown	unknown	gnl\|CDD\|224198
CP029166.1\|AWI92930.1\|926464_926887_-\|organic-hydroperoxide-reductase-OsmC/OhrA	unknown	unknown	gnl\|CDD\|274649
CP029166.1\|AWI92942.1\|933621_934317_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
CP029166.1\|AWI92931.1\|927034_927751_+\|3-dehydroquinase	unknown	unknown	gnl\|CDD\|184156
CP029166.1\|AWI92935.1\|929500_929881_+\|glycine-cleavage-system-protein-H	unknown	unknown	gnl\|CDD\|234918
CP029166.1\|AWI92943.1\|934334_935156_+\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381
CP029166.1\|AWI92946.1\|937359_938088_-\|exotoxin	unknown	unknown	gnl\|CDD\|280949
CP029166.1\|AWI92932.1\|927833_928373_+\|nitroreductase	unknown	unknown	gnl\|CDD\|380312
CP029166.1\|AWI92947.1\|938157_938589_-\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI92945.1\|936607_937336_-\|exotoxin	unknown	unknown	gnl\|CDD\|280949
CP029166.1\|AWI92933.1\|928522_928843_-\|thioredoxin	unknown	unknown	gnl\|CDD\|239245

Protein	Function_ID	Function_description	E-value
CP029166.1\|AWI92940.1\|932058_932355_+\|thioredoxin	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	7.01368e-14
CP029166.1\|AWI92939.1\|931679_932066_+\|topiosmerase	gnl\|CDD\|224572	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair].	2.45102e-36
CP029166.1\|AWI92944.1\|935298_936519_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	6.11443e-38
CP029166.1\|AWI92929.1\|925571_926066_-\|N-acetyltransferase	gnl\|CDD\|372596	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain.	2.53639e-47
CP029166.1\|AWI92934.1\|928986_929343_+\|arsenate-reductase-family-protein	gnl\|CDD\|239334	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.	1.06191e-56
CP029166.1\|AWI92941.1\|932603_933629_+\|methionine-import-ATP-binding-protein-MetN-2	gnl\|CDD\|224058	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism].	3.37873e-170
CP029166.1\|AWI92937.1\|930059_930938_+\|DUF1963-domain-containing-protein	gnl\|CDD\|226395	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown].	1.16579e-75
CP029166.1\|AWI92928.1\|924799_925417_-\|amino-acid-transporter	gnl\|CDD\|224198	COG1279, COG1279, Lysine efflux permease [General function prediction only].	9.12336e-62
CP029166.1\|AWI92930.1\|926464_926887_-\|organic-hydroperoxide-reductase-OsmC/OhrA	gnl\|CDD\|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	5.58225e-61
CP029166.1\|AWI92942.1\|933621_934317_+\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	9.67625e-100
CP029166.1\|AWI92931.1\|927034_927751_+\|3-dehydroquinase	gnl\|CDD\|184156	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase.	1.26721e-148
CP029166.1\|AWI92935.1\|929500_929881_+\|glycine-cleavage-system-protein-H	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	2.81086e-68
CP029166.1\|AWI92943.1\|934334_935156_+\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	2.15951e-112
CP029166.1\|AWI92946.1\|937359_938088_-\|exotoxin	gnl\|CDD\|280949	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain.	1.13367e-27
CP029166.1\|AWI92932.1\|927833_928373_+\|nitroreductase	gnl\|CDD\|380312	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase YdjA from Escherichia coli. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.	1.47647e-49
CP029166.1\|AWI92945.1\|936607_937336_-\|exotoxin	gnl\|CDD\|280949	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain.	1.08384e-24
CP029166.1\|AWI92933.1\|928522_928843_-\|thioredoxin	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	2.70086e-24

>CP029166.1|AWI92937.1|930059_930938_+|DUF1963-domain-containing-protein
MLNIQDVSHLSKKEQKAYNRFVESVENGNLPVLPCIEMDLKEMQEETLNQSKIGGMPFLKSFKDIPLDENNVPMVLLAQINLDDLPEQQELFPVKEGILQFWISSEDQMYGMSENLKGNNINSRLVYIKEPITDLSLENIQAHLKSLDADNEDIPFSGAFSIEFRLSKQTITCTDYKYDEDVLALWNKVNPSFALKSMFGGYDELMEPVCNTFTAKEPFNQLGGYPYFDQIDPRTNDQELKMYDRVLLQIDSTRDGNSSIIWGDLGIANILVKSTDLEAMKFDDYMYSWDCS
>CP029166.1|AWI92936.1|929944_930058_+|hypothetical-protein
MKEKLLGTIIWSIATFYYSRMMEIMNLAILKIKIWGS
>CP029166.1|AWI92935.1|929500_929881_+|glycine-cleavage-system-protein-H
MAVPNELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE
>CP029166.1|AWI92934.1|928986_929343_+|arsenate-reductase-family-protein
MIKFYQYKNCTTCKKAAKFLDEYGVSYEPIDIVQHTPTINEFKTIIANTGVEINKLFNTHGAKYRELDLKNKLQTLSDDEKLELLSSDGMLVKRPLAVMGDKITLGFKEDQYKETWLA
>CP029166.1|AWI92933.1|928522_928843_-|thioredoxin
MQSIKSNESFKSVINSDTPVIVKFEAGWCPDCRAMDLWIDPIVEQYNDYQWYTVNRDELEDVVVENEVMGIPSLLVFKNGDKIAHLHSANAKSPEQVESFLAETFK
>CP029166.1|AWI92932.1|927833_928373_+|nitroreductase
MELQQAIANRRSVKKFKRDMHIDDALLYQAIEKAADAPNHGMREPWRVVHVPKDRLGDMSKDISKFAFPNELDKQQCHYDAVTKLGGMLLLILKTDPRQRQNDENYFAFGAYAQNLMLLLYEAGIGTCWKSPLYIYDPKVRKTLGIKKDEVLAGFLYLTDLEGDMPKAPRKNRNLITLY
>CP029166.1|AWI92931.1|927034_927751_+|3-dehydroquinase
MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGVPQAPGQIDVTDLKAQVTLY
>CP029166.1|AWI92930.1|926464_926887_-|organic-hydroperoxide-reductase-OsmC/OhrA
MAIHYETKATNVGGRKGHVYTDDRALDIDIVPPAQADGKATNPEQLFAAGYASCFNGAFDLILKQNKVRDAHPEVTLTVRLEDDSDSESPKLSVSIDATIKNVISQEEAEKYLQMAHEFCPYSKATQGNINVDLNVNVVD
>CP029166.1|AWI92929.1|925571_926066_-|N-acetyltransferase
MIEIKTLTNNDFNEYKRLVSTVNEEFTQDSHYSQTMTDTLIHDILNQGSPKCIVFGCYENETLIATAALEQIRYVGKEHKSLIKYNFVTNNDKSINSELINFIINYARQNNYESLLTSIVSNNIGAKVFYSALGFDILGFEKNAIKIGNTYFDEHWLFYDLINK
>CP029166.1|AWI92928.1|924799_925417_-|amino-acid-transporter
MVTAIIHGFILAIGLILPLGAQNVFIFNQGANQPKYRYVLPAIITAGLSDSLLIIIAVVGVSIIIMSLPVLQAIIYIVGLIFLMYMAWTIWHDKPSTDGETQIMSPMKQVSFALSVSLLNPHAILDTIGVIGSSAALYSGSNKIAFTIACISVSWLWFFLLAILGKMVGSIDKTGKLLTIINKISSIIIIIVALMILQKLIQLLF
>CP029166.1|AWI92938.1|931356_931470_+|hypothetical-protein
MLGPRQLAHYCKLTYHQLLCWGPAIIEKFVIGVFSFG
>CP029166.1|AWI92939.1|931679_932066_+|topiosmerase
MAIVNKVIIVEGKSDKKRVQQVIAEPVNIICTHGTMSIDKLDDMIESLYDKQVFVLADSDDEGDRIRNWFKRYLSESEHIFIDKTYCQVANCPKQYLAHVLSKHGFTCKKETPLLPNINNERLVLVNE
>CP029166.1|AWI92940.1|932058_932355_+|thioredoxin
MNNSLDIKDVTTFYEEDKHLIFGYTPTCGTCKVSERMLDIANEILQLPLLKIDLNFYPQFCKDMQIMSTPILLLMNKDKEVKRIYAFKSVTDLLENLK
>CP029166.1|AWI92941.1|932603_933629_+|methionine-import-ATP-binding-protein-MetN-2
MIELKEVVKEYRTKNKEVLAVDHVNLSIRAGSIYGVIGFSGAGKSTLIRMFNHLEAPTSGEVIIDGDHIGQLSKNGLRAKRQKVSMIFQHFNLLWSRTVLKNIMFPLEIAGVPRRRAKQKALELVELVGLKGREKAYPSELSGGQKQRVGIARALANDPTVLLCDEATSALDPQTTDEILDLLLKIREQQNLTIVLITHEMHVIRRICDEVAVMESGKVIEQGPVTQVFENPQHTVTKRFVKDDLNDDFETSLTELEPLEKDAYIVRLVFAGSTTTEPIVSSLSTAYDIKINILEANIKNTKNGTVGFLVLHIPYISSVDFGKFEKELIERQVKMEVLRHG
>CP029166.1|AWI92942.1|933621_934317_+|ABC-transporter-permease
MGKSFSEIINEMITMPNIQWPEVWTAIVETLYMTVVSTIFAFILGLILGVLLFLSAKGKSIGARLFYSIVSFIVNLFRAIPFIILILLLIPFTSLILGTISGPTGALPALIIGAAPFYARLVEIAFKEIDKGVIEAAWSMGANTWTVIRKVLLPEAMPALVSGITVTAIALVGSTAVAGVIGAGGLGNLAYLTGFTRNQNDVILVSTVFILIIVFIIQFIGDWLTNKLDKR
>CP029166.1|AWI92943.1|934334_935156_+|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein
MKKLFGLILVLTFAVVLAACGNGNKSGSDDKKITVGASPAPHAEILEKAKPLLEKKGYELDIKTINDYTTPNKLLDKGEIDANYFQHTPYLNTEKKDKGYKIVSAGDVHLEPMAVYSKKYKSLKELPKGATVYVSNNPAEQGRFLKFFVDAGLIKIKKGVKIEDAKFSDITENKKDIKFNNKQSAEFLPKIYQNEDADAVIINSNFAIEQKLNPKKDSIAVESAKDNPYANLIAVKEGHQDDKKIKALIEVLQSKDIQDFINEKYNGAVIPAK
>CP029166.1|AWI92944.1|935298_936519_-|site-specific-integrase
MWLEKFKNKNKETKYRYYEKYKDPLTAKWRRVSVVLNKNGKQSQKEAQRLLNERIEAKLNDKTPTTLKSLTFHVACDEWFQSYIKTSGSKRTTIKTKLSKLNTLKKFVDEDILINKITLSYAQQVFDEMDNKGYVYQVNKDALSIFKNVFEYTRRIYKLQDLEFLKDITLNKRIKSYDEVKAKRNKYLELNEIQSIIKDINTKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGEMLAIQNEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAILENKKDSKWNDGYLNRNFVFTNHKGNPMQTERFNKILREAAKDVGIDKEVSSHILRHSHISLLSQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKLEQVKLG
>CP029166.1|AWI92945.1|936607_937336_-|exotoxin
MKKLISILLINIIILGVSNSASAQGDIGIDNLRNFYTKKDFVDLKDVKDNDTPIANQLQFSNESYDLISESKDFNKFSNFKGKKLDVFGISYNGQCNTKYIYGGVTATNEYLDKSRNIPINIWINGNHKTISTNKVSTNKKFVTAQEIDVKLRKYLQEEYNIYGHNGTKKGEEYGHKSKFYSGFNIGKVTFHLNNNDTFSYDLFYTGDDGLPKSFLKIYEDNKTVESEKFHLDVDISYKETI
>CP029166.1|AWI92946.1|937359_938088_-|exotoxin
MNKIFRILTVSLFFFTFLIKNNLAYADVGVINLRNFYANYEPEKLQGVSSGNFSTSHQLEYIDGKYTLYSQFHNEYEAKRLKDHKVDIFGISYSGLCNTKYMYGGITLANQNLDKPRNIPINLWVNGKQNTISTDKVSTQKKEVTAQEIDIKLRKYLQNEYNIYGFNKTKKGQEYGYQSKFNSGFNKGKITFHLNNEPSFTYDLFYTGTGQAESFLKIYDDNKTIDTENFHLDVEISYEKTE
>CP029166.1|AWI92947.1|938157_938589_-|hypothetical-protein
MRKLLGLALASTLILGACGSNDGDKKEESKSYTTNDIVKGFKDNKLNVINEKEMTREDFGLAPMKTDEAKMFVVQDDKNARVMKFKNSDDLKQTKKYYDELGKESAAFYSHTHSKGKFLIQMNGDIDDATFNKYKNSMDKTLK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP029166_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029166_6

1129434-1129521

Orphan

Consensus_repeat	Method
CCCCTAACAACTAAAAGTTGTAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029166_6

>merge|CP029166|6|1129434-1129521|CRISPRCasFinder
CCCCTAACAACTAAAAGTTGTAAGGAAGGAGAGGGATACATGCGCCGAGCACATGCATAAAATCCCCTAACAACTAAAAGTTGTAAGG

>CP029166|6|6|1129434-1129521|CRISPRCasFinder
CCCCTAACAACTAAAAGTTGTAAGG	AAGGAGAGGGATACATGCGCCGAGCACATGCATAAAAT
CCCCTAACAACTAAAAGTTGTAAGG

Protein	Signature genes	Signature genes Name	Protein_function
CP029166.1\|AWI93136.1\|1121533_1122562_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
CP029166.1\|AWI93146.1\|1131536_1132709_+\|class-I-SAM-dependent-rRNA-methyltransferase	unknown	unknown	gnl\|CDD\|224017
CP029166.1\|AWI93134.1\|1117888_1120078_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	unknown	unknown	gnl\|CDD\|234921
CP029166.1\|AWI93149.1\|1133727_1135446_+\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|224006
CP029166.1\|AWI93138.1\|1123145_1124624_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/inosine-monophosphate-cyclohydrolase	unknown	unknown	gnl\|CDD\|234854
CP029166.1\|AWI93148.1\|1133458_1133725_+\|phosphocarrier-protein-HPr	unknown	unknown	gnl\|CDD\|237503
CP029166.1\|AWI93144.1\|1129530_1129665_-\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI93143.1\|1129310_1129430_+\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI93151.1\|1136113_1137475_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
CP029166.1\|AWI93140.1\|1126157_1126964_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
CP029166.1\|AWI93152.1\|1137471_1138491_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|224213
CP029166.1\|AWI94918.1\|1131132_1131336_-\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI93139.1\|1124645_1125893_+\|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl\|CDD\|237507
CP029166.1\|AWI93150.1\|1135682_1135916_-\|glutaredoxin-family-protein	unknown	unknown	gnl\|CDD\|239274
CP029166.1\|AWI93141.1\|1126956_1128357_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213192
CP029166.1\|AWI93145.1\|1129816_1131112_+\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI93147.1\|1132762_1133305_+\|DUF697-domain-containing-protein	unknown	unknown	gnl\|CDD\|368297
CP029166.1\|AWI93142.1\|1128371_1128947_-\|thiamine-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|227065
CP029166.1\|AWI93135.1\|1120056_1121541_+\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235984
CP029166.1\|AWI93137.1\|1122564_1123131_+\|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|223376

Protein	Function_ID	Function_description	E-value
CP029166.1\|AWI93136.1\|1121533_1122562_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
CP029166.1\|AWI93146.1\|1131536_1132709_+\|class-I-SAM-dependent-rRNA-methyltransferase	gnl\|CDD\|224017	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only].	5.6543e-145
CP029166.1\|AWI93134.1\|1117888_1120078_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	gnl\|CDD\|234921	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL.	0
CP029166.1\|AWI93149.1\|1133727_1135446_+\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	0
CP029166.1\|AWI93138.1\|1123145_1124624_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/inosine-monophosphate-cyclohydrolase	gnl\|CDD\|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
CP029166.1\|AWI93148.1\|1133458_1133725_+\|phosphocarrier-protein-HPr	gnl\|CDD\|237503	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional.	2.44795e-51
CP029166.1\|AWI93151.1\|1136113_1137475_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	2.48829e-165
CP029166.1\|AWI93140.1\|1126157_1126964_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	7.39205e-29
CP029166.1\|AWI93152.1\|1137471_1138491_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|224213	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion].	6.42118e-76
CP029166.1\|AWI93139.1\|1124645_1125893_+\|phosphoribosylamine--glycine-ligase	gnl\|CDD\|237507	PRK13790, PRK13790, phosphoribosylamine--glycine ligase; Provisional.	0
CP029166.1\|AWI93150.1\|1135682_1135916_-\|glutaredoxin-family-protein	gnl\|CDD\|239274	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, could be a mechanism for regulating the oxidation state of the protein.	5.00495e-16
CP029166.1\|AWI93141.1\|1126956_1128357_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	1.67975e-64
CP029166.1\|AWI93147.1\|1132762_1133305_+\|DUF697-domain-containing-protein	gnl\|CDD\|368297	pfam05128, DUF697, Domain of unknown function (DUF697). Family of bacterial hypothetical proteins that is sometimes associated with GTPase domains.	0.00779365
CP029166.1\|AWI93142.1\|1128371_1128947_-\|thiamine-ABC-transporter-permease	gnl\|CDD\|227065	COG4721, COG4721, ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism].	4.34592e-70
CP029166.1\|AWI93135.1\|1120056_1121541_+\|amidophosphoribosyltransferase	gnl\|CDD\|235984	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional.	0
CP029166.1\|AWI93137.1\|1122564_1123131_+\|phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|223376	COG0299, PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism].	7.23817e-92

>CP029166.1|AWI93143.1|1129310_1129430_+|hypothetical-protein
MKRDTYQSYLFNNSEEPVHNGLRIIVYKEEEGYMRRAHA
>CP029166.1|AWI93142.1|1128371_1128947_-|thiamine-ABC-transporter-permease
MSKGLKLSEILVTVLISVVFAVIYNLWWFVYNGVQATGLHLEQLTNGVWFMAAIVCYLIIPKPGIALLAEFAAGAGETIIMGRFDIPTIVYAFIQGLACELVFAIFKYQSRSVMVAMLAGFCTAIAAFPIDYFYGYLNEVAGWNLTLFIVFRLISGAVVAGVLSYLLVKALDKTGVTKLFRPAAKEDYDNL
>CP029166.1|AWI93141.1|1126956_1128357_-|ABC-transporter-ATP-binding-protein
MLKVSDLRLKYPSGQRKIFDHLNITIQDKEKVLLLGPSGCGKSTLLNVLSGIVPNLIELPMKYDELIVDPLSGVIFQDPDSQFCMPKVYEELAFVLENRQLPREDMDALIINALNMVNLNVTPETYIKDLSGGMKQKLAIVETILQQSKTLFLDEPTAMLDVQATEDLWTKLIELWEDQTVVIVEHKVKHIWNHVDRVILMDYNGNIIADECPEIILQKYVHLLSEYGVWHPRAWEFAPSRVDFPTTNSHLLQFKNGRIIRGKSTLLSFSDLEIGLGEWITITGANGSGKTTLLESIMQLIKYQGDVYFENQRLTKIKHAAKHMYLVYQNPELQFITNSVYDEINIHFNHLSKDQSDDETIQLLKLLDLQNVKDQHPYELSIGQKRRLSVATALSSKADIIFLDEPTFGLDSHNTFQLIKLFQKRINLGQSIVMVTHDDEIIERYPSRRLKISDGALLDCDGDTNV
>CP029166.1|AWI93140.1|1126157_1126964_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MYEQWKVRQSFVDDVNIITKLFLGIILFFFIIFVHNFDFMLYITILMLVFLLMFNGTQFKITAIFITISIGFALLSSLFMILYGNGSHTILKFGFIHITTESLVRGLHVSLRTIAISFFGILIALTSQVVMIFYSLMQHLKVKSKVAYAFMAAIRMIPLMISSLIQLRRSLKMRYQMIDAANYRGLKRFKHLIIPLLSQNIRKAHQLSVAMESKGFRDGPRTYYYNVPFSYKDIIFIIVLIAIITMAYYCSITLPITGIDDVRLGRVG
>CP029166.1|AWI93139.1|1124645_1125893_+|phosphoribosylamine--glycine-ligase
MNVLVIGAGGREHALAYKLNQSNLVKQVFVIPGNEAMTPIAEVHTEISESDHQAILDFAKRQNVDWVVIGPEQPLIDGLADILRANGFKVFGPNKQAAQIEGSKLFAKKIMEKYNIPTADYKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYGDEEEGTVVFETFLEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHDEGPNTGGMGAYCPVPHISDDVLKLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDGPKVIEFNARFGDPEAQVLLSRMESDLMQHIIDLDEGKRTEFKWKNESIVGVMLASKGYPDAYEKGHKVSGFDLNENYFVSGLKKQGDTFVTSGGRVILAIGKGDNVQDAQRDAYKKVSQIQSDHLFYRHDIANKALQLK
>CP029166.1|AWI93138.1|1123145_1124624_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/inosine-monophosphate-cyclohydrolase
MKKAILSVSNKTGIVEFAKALTQLNYELYSTGGTKRILDEANVPVRSVSDLTHFPEIMDGRVKTLHPAVHGGILADRNKPQHLNELSEQHIDLIDMVVVNLYPFQQTVANPDVTMDEAIENIDIGGPTMLRAAAKNYKHVTTIVHPADYQEVLTRLRNDSLDESYRQSLMIKVFEHTAEYDEAIVRFFKGDKETLRYGENPQQSAYFVRTSNAKHTIAGAKQLHGKQLSYNNIKDADATLALVKKFDTPATVAVKHMNPCGVGIGDTIEQAFQHAYEADSQSIFGGIVALNRAVTPELAEQLHSIFLEVIIAPKFTDEALDILKQKKNVRLLEIDMTIDSNEEEFVSVSGGYLVQDKDNYVVPKEEMKVVTEVAPTDEQWEAMLLGWKVVPSVKSNAIILSNNKQTVGIGAGQMNRVGAAKIALERAIEINDHVALVSDGFFPMGDTVELAAQHGIKAIIQPGGSIKDQDSIDMANKHGIAMVVTGTRHFKH
>CP029166.1|AWI93137.1|1122564_1123131_+|phosphoribosylglycinamide-formyltransferase
MVKIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEPKQFDSKAAYEQHLVTLLNEDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDSGMDTGEIIEQRKCDIRPDDSKEQLEEKVKKLEYELYPSVIAKIVK
>CP029166.1|AWI93136.1|1121533_1122562_+|phosphoribosylformylglycinamidine-cyclo-ligase
MSKAYEQSGVNIHAGYEAVERMSSHVKRTMRKEVIGGLGGFGATFDLSQLNMTAPVLVSGTDGVGTKLKLAIDYGKHDSIGIDAVAMCVNDILTTGAEPLYFLDYIATNKVVPEVIEQIVKGISDACVETNTALIGGETAEMGEMYHEGEYDVAGFAVGAVEKDDYVDGSEVKEGQVVIGLASSGIHSNGYSLVRKLINESGIDLASNFDNRPFIDVFLEPTKLYVKPVLALKKEVSIKAMNHITGGGFYENIPRALPAGYAARIDTTSFPTPKIFDWLQQQGNIDTNEMYNIFNMGIGYTVIVDEKDVSRALKILAEQNVEAYQIGHIVKNESTAIELLGV
>CP029166.1|AWI93135.1|1120056_1121541_+|amidophosphoribosyltransferase
MFNYSGLNEECGVFGIWNHPEAAQLTYMGLHSLQHRGQEGAGIVVSDQNELKGERGLGLLTEAIKDDQMERLKGYQHAIGHVRYATSGNKGIENIQPFLYHFYDMSVGICHNGNLINAKSLRQNLEKQGAIFHSSSDTEVIMHLIRRSKAPTFEEALKESLRKVKGGFTFAILTKDALYGAVDPNAIRPLVVGKMKDGTYILASETCAIDVLGAEFVQDIHAGEYVVINDKGITVKSYTHHTTTAISAMEYIYFARPDSTIAGKNVHAVRKASGKKLAQESPVNADMVIGVPNSSLSAASGYAEEIGLPYEMGLVKNQYVARTFIQPTQELREQGVRVKLSAVKDIVDGKNIILVDDSIVRGTTIRRIVKMLKNSGANKVHVRIASPEFMFPSFYGIDVSTTAELISASKSPEEIKDYIGADSLAYLSVDGLIESIGLDYDAPYSGLCVESFTGDYPAGLYDYEANYKAHLSHRQKQYISKNKHFFDSEGNLNV
>CP029166.1|AWI93134.1|1117888_1120078_+|phosphoribosylformylglycinamidine-synthase-subunit-PurL
MSKFIEPSVEEIKLEKVYQDMGLSDQEYEKVCDILGRQPNFTETGIFSVMWSEHCSYKHSKPFLKQFPTSGDHVLMGPGEGAGVVDIGDNQAVVFKVESHNHPSAIEPYQGAATGVGGIIRDIVSIGARPINLLNSLRFGELDNKQNQRLLKGVVKGIGGYGNCIGIPTTAGEIEFDERYDGNPLVNAMCVGVINHDMIQKGTAKGVGNSVIYVGLKTGRDGIHGATFASEELTEESESKRPSVQIGDPFVGKKLMEATLEAITFDELVGIQDMGAAGLTSSSSEMAAKGGSGLHLRLEQVPTREPGISPYEMMLSETQERMLLVVEKGTEQKFLDLFDKHELDSAVIGEVTDTNRFVLTYDDEVYADIPVEPLADEAPVYILEGEEKDYNTSKNDYTHIDVKDTFFKLLKHPTIASKHYLYDQYDQQVGANTIIKPGLQASVVRVEGTNKAIASTIDGEARYVYNNPYEGGKMVVAEAYRNLIAVGATPLAMTDCLNYGSPEKKEIYQQLIDSTKGMAEACDILKTPVVSGNVSLYNETKGTSIFPTPVVGMVGLIENVNYLNDFEPQVGDKLYLIGDTKDDFGGSQLEKLIYGKVNHEFESLDLSSEVEKGESIKTAIREGLLSHVQTVGKGGLLITLAKLSAHYGLGLKSSIDITNAQLFSETQGRYVVSVKSGKTLNIDNAIEIGLLTDSDNFKVTTPYTEISENVSDIKQIWEGAIAQCLTTQD
>CP029166.1|AWI93144.1|1129530_1129665_-|hypothetical-protein
MSNENQNKKAAEKAKEVEEKLKDKKEEKTEDINQTKQDIQDTLN
>CP029166.1|AWI93145.1|1129816_1131112_+|hypothetical-protein
MSFLRKHAEIIFSYLIGIVSLFTGLIILINLPLIKQLNGGKKVDTHVHNVWEFLNAFFSEIIKVMSRFIGNFPIVSAIVIIIFGILVMLIGHTLLRTIKYDYDISIFFLVIGIMYFIITLILMTQVYGFFAVIFIIPFTIHIGYIVYKDELNQENVKNHFMWIIVSYGISYLITQIALYGRIDANEIESIDILSVNAFFIIMWLLGQMAIWNFLFLRRALPLTKQELGEEEPELSRTSKGNVTNQTKIHLKQLQDKTTEYARKTRRSVDLDKIRAKRDKFKKKVNDIIDIQEDDIPDWMRKPKWVKPMYVELFCGVVIFLFTFLEFNNRNALFVSGDWKLSQTQYVIEWVTLLILLFIIIAYIATTLTFHLKGKFYYLQLFMGSILFFKLLTEFINIMIHGLLLSVFITPTLLLMLLAIIISYSLQLRERP
>CP029166.1|AWI94918.1|1131132_1131336_-|hypothetical-protein
MILQMDNFSTILFALKLCIQFSILNSHHLNQSNLVTKKVLSINFIDLYLSKLEIYLTYSVHIKMFNR
>CP029166.1|AWI93146.1|1131536_1132709_+|class-I-SAM-dependent-rRNA-methyltransferase
MKIATLNKGKETKYFNGYPLIEEEDIYSQDHLKEGDIFQIVTDKSQYVATAYVGRQHKGLGWVLTYDKAQQINTAFFVKLFNTALAERDYYFNIDGTNAFRLFNAEGDGVGGLTIDNYDGHLLIQWYSKGIYKFKYAILEAVRKVFDYKSIYEKVRFKDSEYSGGFVEGDAPEFPIVIEENFTFYNVDLEDGLMTGIFLDQKEVRKKLRDQYAKERHVLNLFSYTGAFSAIAASEASSTTSVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDFYKYAARHGHSYDTIVIDPPSFARNKKRTFSVQKDYDKLINGALNILSSEGTLLLCTNASVYPLKQFKNTIKKTLEESGVDYELTEVMGLPKDFKTHPHYKPSKYLKAVFVNIRH
>CP029166.1|AWI93147.1|1132762_1133305_+|DUF697-domain-containing-protein
MGFKNNLTSNLTNKIGNSVFKIENVDGKGAMPTTIQELRERRQRAEAIVKRKSLMSSTMSVVPIPGLDFGVDLKLMKDIIEDVNKIYGLDHKQVNSLGDDVKERIMSAAAIQGSQFIGKRISNAFLKIVIRDVAKRTAAKQTKWFPVVGQAVSASISYYFMNKIGKDHIQKCENVIKNVM
>CP029166.1|AWI93148.1|1133458_1133725_+|phosphocarrier-protein-HPr
MEQNSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGKDAEITIYADGSDESDAIQAISDVLSKEGLTK
>CP029166.1|AWI93149.1|1133727_1135446_+|phosphoenolpyruvate--protein-phosphotransferase
MSKLIKGIAASDGVAIAKAYLLVEPDLTFDKNEKVTDVEGEVAKFNSAIEASKVELTKIRNNAEVQLGADKAAIFDAHLLVLDDPELIQPIQDKIKNENANAATALTDVTTQFVTIFESMDNEYMKERAADIRDVSKRVLSHILGVELPNPSMIDESVVIVGNDLTPSDTAQLNKEFVQGFATNIGGRTSHSAIMSRSLEIPAIVGTKSITQEVKQGDMIIVDGLNGDVIVNPTEDELIAYQDKRERYFADKKELQKLRDADTVTVDGVHAELAANIGTPNDLPGVIENGAQGIGLYRTEFLYMGRDQMPTEEEQFEAYKEVLEAMGGKRVVVRTLDIGGDKELSYLNLPEEMNPFLGYRAIRLCLAQQDIFRPQLRALLRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDFFSIGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEMAGDETAIPLLLGLGLDEFSMSATSILKARRQINGLSKNEMTELANRAVDCATQEEVIELVNNYVK
>CP029166.1|AWI93150.1|1135682_1135916_-|glutaredoxin-family-protein
MSEIIVYTQNDCPPCTFVKNYLNEHHIDFEERNINNQQYRNEMIDFDAFSTPFILLNGNPMYHVDLDEINKVLNIQD
>CP029166.1|AWI93151.1|1136113_1137475_+|cytochrome-ubiquinol-oxidase-subunit-I
MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTITVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFKNKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKNGKMVNVQPIEAMFNPSFIVRSFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDLSAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVKTKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLYGILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAATQAGGITFVTILFGILYIILMYTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
>CP029166.1|AWI93152.1|1137471_1138491_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MIYAFIGITVLWLFLFCYIIIASIDFGAGFFALHSKLTGDEKKINHLISRYLNPVWEVTNVFFVFFFVGFVGFFPESIKYLGTVLLIPGSIALIMISLRNSFYAFENYGQDTKLAWMIMYGVSGLLIPASLSTALTITEGGYINVRNNVIDLDWVQLLLSPFAWSVVFLAIISVLYISSGFLTYYAKKANDEPAYNLTRQWHIFLGPPMIIICLFVFLSLRIQNSEHFYSAVFDYWWMFGISFLFFALASLLTFFKKKHGLAFVFVILQMMFAFFGYGISKLPYLLYPFVKITDAYVNPEMGWTLVIVFILGLLLLLPSLILLLRLFVFDKEYVEGKKS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP029166_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029166_7

2304573-2304723

Orphan

Consensus_repeat	Method
AACTTTAGTTGTTAGGGGCTCTTATGCA	CRISPRCasFinder

2 spacers

csa3

The CRISPR arrays of CP029166_7

>merge|CP029166|7|2304573-2304723|CRISPRCasFinder
AACTTTAGTTGTTAGGGGCTCTTATGCATGCGCTTAGCGCAGGCGCTCCTACTTTTAAACTTTAGTTGTTAGGGGCTCTTATGCAGTTGATGCGTAGCATCCAACTGTGTTCCTCTATTTTTCAACTTTAGTTGTTAGGGGCTTCTTTCTA

>CP029166|7|7|2304573-2304723|CRISPRCasFinder
AACTTTAGTTGTTAGGGGCTCTTATGCA	TGCGCTTAGCGCAGGCGCTCCTACTTTTA
AACTTTAGTTGTTAGGGGCTCTTATGCA	GTTGATGCGTAGCATCCAACTGTGTTCCTCTATTTTTC
AACTTTAGTTGTTAGGGGCTTCTTTCTA

Protein	Signature genes	Signature genes Name	Protein_function
CP029166.1\|AWI94301.1\|2308067_2308925_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|223635
CP029166.1\|AWI94295.1\|2302217_2303198_+\|cation-transporter	unknown	unknown	gnl\|CDD\|224151
CP029166.1\|AWI94297.1\|2305054_2305159_-\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI94291.1\|2299444_2299675_-\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI94288.1\|2295885_2296329_-\|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl\|CDD\|223854
CP029166.1\|AWI94296.1\|2303463_2304555_+\|transcriptional-regulator	unknown	unknown	unknown
CP029166.1\|AWI94290.1\|2297399_2298773_-\|EVE-domain-containing-protein	unknown	unknown	gnl\|CDD\|376640
CP029166.1\|AWI94306.1\|2316209_2316644_+\|mannitol-specific-phosphotransferase-enzyme-IIA-component	unknown	unknown	gnl\|CDD\|227014
CP029166.1\|AWI94304.1\|2312492_2314031_+\|PTS-mannitol-transporter-subunit-IICB	unknown	unknown	gnl\|CDD\|225123
CP029166.1\|AWI94293.1\|2301078_2301744_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187554
CP029166.1\|AWI94303.1\|2310006_2311812_-\|glutamine--fructose-6-phosphate-aminotransferase	unknown	unknown	gnl\|CDD\|234729
CP029166.1\|AWI94302.1\|2308992_2309775_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224044
CP029166.1\|AWI94292.1\|2299705_2300644_-\|class-I-mannose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|224399
CP029166.1\|AWI94298.1\|2305583_2305787_-\|resolvase	unknown	unknown	gnl\|CDD\|239737
CP029166.1\|AWI94287.1\|2295054_2295765_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
CP029166.1\|AWI94294.1\|2301895_2302216_+\|ArsR-family-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
CP029166.1\|AWI94300.1\|2307270_2307363_+\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI94299.1\|2305845_2306982_-\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|366887
CP029166.1\|AWI94305.1\|2314065_2316198_+\|PRD-domain-containing-protein	unknown	unknown	gnl\|CDD\|226234
CP029166.1\|AWI94289.1\|2296528_2296942_-\|thiol-disulfide-oxidoreductase-DCC-family-protein	unknown	unknown	gnl\|CDD\|225556

Protein	Function_ID	Function_description	E-value
CP029166.1\|AWI94301.1\|2308067_2308925_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	5.39747e-59
CP029166.1\|AWI94295.1\|2302217_2303198_+\|cation-transporter	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	1.049e-108
CP029166.1\|AWI94304.1\|2312492_2314031_+\|PTS-mannitol-transporter-subunit-IICB	gnl\|CDD\|225123	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism].	0
CP029166.1\|AWI94288.1\|2295885_2296329_-\|DNA-starvation/stationary-phase-protection-protein	gnl\|CDD\|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	1.22744e-67
CP029166.1\|AWI94290.1\|2297399_2298773_-\|EVE-domain-containing-protein	gnl\|CDD\|376640	pfam01878, EVE, EVE domain. This domain was formerly known as DUF55. Crystal structures have shown that this domain is part of the PUA superfamily. This domain has been named EVE and is thought to be RNA-binding.	3.86989e-06
CP029166.1\|AWI94306.1\|2316209_2316644_+\|mannitol-specific-phosphotransferase-enzyme-IIA-component	gnl\|CDD\|227014	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism].	2.08822e-62
CP029166.1\|AWI94293.1\|2301078_2301744_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187554	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5. This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	5.74381e-48
CP029166.1\|AWI94303.1\|2310006_2311812_-\|glutamine--fructose-6-phosphate-aminotransferase	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
CP029166.1\|AWI94302.1\|2308992_2309775_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	4.88024e-103
CP029166.1\|AWI94292.1\|2299705_2300644_-\|class-I-mannose-6-phosphate-isomerase	gnl\|CDD\|224399	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism].	7.24075e-129
CP029166.1\|AWI94298.1\|2305583_2305787_-\|resolvase	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	1.78732e-14
CP029166.1\|AWI94287.1\|2295054_2295765_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	2.10672e-157
CP029166.1\|AWI94294.1\|2301895_2302216_+\|ArsR-family-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.8473e-17
CP029166.1\|AWI94299.1\|2305845_2306982_-\|DNA-binding-protein	gnl\|CDD\|366887	pfam02037, SAP, SAP domain. The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain found in diverse nuclear and cytoplasmic proteins.	3.91533e-06
CP029166.1\|AWI94305.1\|2314065_2316198_+\|PRD-domain-containing-protein	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	2.21295e-67
CP029166.1\|AWI94289.1\|2296528_2296942_-\|thiol-disulfide-oxidoreductase-DCC-family-protein	gnl\|CDD\|225556	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function prediction only].	3.14887e-46

>CP029166.1|AWI94296.1|2303463_2304555_+|transcriptional-regulator
MFTYFKSAFKNAKPQLLITLIYALIAFAVIAVVYLLANFQLAKYAQTIAIYSQFGQKPPVDAYLKVIAVLLIAAVVSLFVLVQIFIGITNVMKRAMSHEKVKFTDLFIAFKKGNYLKSVLIGLVSIAMIIVLSLLTSLLYKLFSPVSEMIMNSVQSSYADSTHLIGIAITTQSIIIIVVLLIKAIITWLLLIPIFNFMTSFVESTNDKVKTHLANGFKAMKNGQKTFFKFFIGILLLNLIIILFKTPVGYLISFNTQSLSQSVAENIIRVYTVMTIILFVVIHAIILMGIVQYYLKRGQKITKDKVKTADKNKKVVTEPKNTKVENDKVTTSVETKTEKAQDSLNDNTTKTMTSDKPEDNQPK
>CP029166.1|AWI94295.1|2302217_2303198_+|cation-transporter
MSHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLANSLALLSDGIHMFSDTFSLGVALVAFIYAEKNATTTKTFGYKRFEVLAALFNGVTLFVISILIVFEAIKRFFVPSEVQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAFLHVIGDLLGSVGAITAAILIWAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGTPSDVDIDEVITTIKKDSRIQSVHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLENIEHDLLHLNIHHMTIQLETPNHKHDESIICSGTHSHSHNHHAHHHAHVH
>CP029166.1|AWI94294.1|2301895_2302216_+|ArsR-family-transcriptional-regulator
MSEQYSEINTDTLERVTEIFKALGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQAIHHANHPKESGL
>CP029166.1|AWI94293.1|2301078_2301744_-|SDR-family-NAD(P)-dependent-oxidoreductase
MNILVIGANGGVGSLLVQQLAKENVPFTAGVRQSDQLNALKSQGMKAILVDVENDSIETLTETFKPFDKVIFSVGSGGNTGADKTIIVDLDGAVKSMIASKEANIKHYVMVSTYDSRRQAFDDSGDLKPYTIAKHYADDYLRRSGLNYTILHPGALTNAAGSGKIEAAQYFDGKGEIPREDVATVLKEIVTSNHFNHQEFQIISGDQDIKDALTQFENETD
>CP029166.1|AWI94292.1|2299705_2300644_-|class-I-mannose-6-phosphate-isomerase
MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRIWSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAEEDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYETMQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVSNDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSVFEGDFTLMISYV
>CP029166.1|AWI94291.1|2299444_2299675_-|hypothetical-protein
MKQFLYIALVCGVIAGLGAFLHIPQYPSMTIPRIVAILGIISAMLTFKDKQISASLKFSALLINVLPLCGTFVASN
>CP029166.1|AWI94290.1|2297399_2298773_-|EVE-domain-containing-protein
MTAETNYFWLNCGYNRWNHNEPLVGQTALFESGAHFNPSQGFRAFKKAKVGDQVIFYQVQTDTGLLGCGEIISVETGAQNKIRVQFRFNEQLKPLTADYLKRSEALEFRISNMKETLFNQITAEEFDLISGLGKGEIKIPRYFFLAETEEFEPGNQYTIYTHTYNGIKRNGYHFYTQLEEGDNIIFYNRTKNQSVVGIGEVSKHIHEKPPIPGRTNSTVIEVSYEKDITPITLSTLNKHPKLKNLYFLQENAKQAIASMSQAQYDAIIEMSDNNGLKSPFEMVQKPDMLESEKEEALKPFILLVVDRKEEGLKAANDLLQKANANPVITTGHPDFSEDMLYGKYLPNETGALYYREGFITQLMPKKDKSYLVIDNFNRIDTDIFQTYINVLEGYEVTLPRYNKDGNMIKWSRQKDSFYYFNPNWHIVGITYDSLEEIKEKYSEQFLKYTRIVKVKHD
>CP029166.1|AWI94289.1|2296528_2296942_-|thiol-disulfide-oxidoreductase-DCC-family-protein
MPIVYYDGNCIYCYNYVIWLIQHDLPRNYQFATLKGEVGQQFFKQHPEAANKNSVILQKGDRIYFESQAIIKLITALPNRTKLLGVGLWLVPKPVRNFGYRMFANNRNRMWKTTWHQPNDYEKSFFLDDNAKVKLTD
>CP029166.1|AWI94288.1|2295885_2296329_-|DNA-starvation/stationary-phase-protection-protein
MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYLS
>CP029166.1|AWI94287.1|2295054_2295765_+|purine-nucleoside-phosphorylase
MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQYNIPGHFAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE
>CP029166.1|AWI94297.1|2305054_2305159_-|hypothetical-protein
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
>CP029166.1|AWI94298.1|2305583_2305787_-|resolvase
MIVYQRKINIDTLKEFGCGCVYSERISGVKRTELVKCLDYLRESDTLVVYQLDRLGRTTKLLIELSQ
>CP029166.1|AWI94299.1|2305845_2306982_-|DNA-binding-protein
MSVNARDLLVLHTNVNRLVGEEIFANKCLANNDVQIMNSIKKLIEAELLTTTNDFEVSIYKKTRPELQSILKSFGIKTTGNKPDLIKRIDDNFHIINNLDLPYVYIPTKKGEEILKKTEYLTSFIQSYGEISLERAYYLVENYIDENCDDKVAEIYKFEFQRKYDNGEFDFNHGYNFELNMLIDHYKRDVKDYDNARKYSNIYLYFGLRDFLKKLMSNYSYYDSKGNIDLNEIQNDLNRFINSSASGMYERLIYNENLSNNIMFELFKKDTQDYSDLEEQLIEKFINYVVSNVKKESRSNTLIELSKILENGYTIDKEEFKKEDDYLSKYIFTDIDYLKKLESKINVAIDIRSGEIHLVLDDDSLDILIQNQKYGNEF
>CP029166.1|AWI94300.1|2307270_2307363_+|hypothetical-protein
MFIFKTTSKSHFHNNVKSLECIKIPINKNR
>CP029166.1|AWI94301.1|2308067_2308925_-|Cof-type-HAD-IIB-family-hydrolase
MDNVKAIFLDMDGTILHENNQASTYTKDVINQLREKGYKVFLATGRSHSEIHQLVPQDFAVNGIISSNGTIGEVDGEIIFKHGLSLAQVQQITNLAKRQQIYYEVFPFEGNRVSLKEDETWMRDMIRSQDPINGVSHSEWSSRQDALAGKIDWVTKFPEGEYSKIYLFSSNLEKITAFRDELKQNHVQLQISVSNSSRFNAETMAYQTDKGTGIKEMIAHFGIHQEETLVIGDSDNDRAMFEFGHYTVAMKNARPEIQALTSDVTAYTNEEDGAAKYLAEHFLAE
>CP029166.1|AWI94302.1|2308992_2309775_-|ABC-transporter-ATP-binding-protein
MLIQLDQIGRMKQGKTILKKISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTVNLFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEIRNEAHQLLKLVGMFAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARESLLSILDSLSDSYPTLAMIYVTHFIEEITANFSKILLLKDGQSIQQGAVEDILTSENMSRFFQKNVAVQRWNNRFSMAMLE
>CP029166.1|AWI94303.1|2310006_2311812_-|glutamine--fructose-6-phosphate-aminotransferase
MCGIVGYIGYDNAKELLLKGLEKLEYRGYDSAGIAVVNDDNTTVFKEKGRIAELRKVADSSDFDGPVGIGHTRWATHGVPNHENSHPHQSSNGRFTLVHNGVIENYEELKGEYLQGVSFISETDTEVIVQLVEYFSNQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALAMLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEGNLKIDQDIINDVKEADRIYVIAAGTSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMPLLSEKPLFVYISQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLLRELAKVTTAIEAIVDDAPIMEQIATDFLETTRNAFFIGRTIDYNVSLEGALKLKEISYIQAEGFAGGELKHGTIALIEEGTPVVGLATQEKVNLSIRGNVKEVVARGAHPCIISMEGLEKEGDTYVIPHVHELLTPLVSVVALQLISYYAALHRDLDVDKPRNLAKSVTVE
>CP029166.1|AWI94304.1|2312492_2314031_+|PTS-mannitol-transporter-subunit-IICB
MSQTEEKKGIGRRVQAFGSFLSSMIMPNIGAFIAWGFIAAIFIDNGWLPNKDLATLAGPMITYLIPLLIAFSGGRLIYDLRGGIIAATATMGVIVALPDTPMLLGAMIMGPLVGWLMKKTDQLIQPRTPQGFEMLFNNFSAGILGFIMTIAGFKILAPLMKFIMHILSVAVEALVHAHLLPLVSILVEPAKIVFLNNAINHGVFTPLGADQAAKAGQSILYTIESNPGPGLGILLAYMIFGKGTAKATSYGAGIIHFLGGIHEIYFPYVLMRPLLFIAVILGGMTGVATYQATGFGFKSPASPGSFIVYCLNAPRGEFLHMLLGVFLAALVSFVVAALIMKFTREPKQDLEAATAQMENTKGKKSSVASKLVSSDKNVNTEENASGNVSETSSSDDDPEALLDNYNTEDVDAHNYNNINHVIFACDAGMGSSAMGASMLRNKFKKAGINDITVTNTAINQLPKDAQLVITQKKLTDRAIKQTPNAIHISVDNFLNSPRYEELLNNLKKDDQA
>CP029166.1|AWI94305.1|2314065_2316198_+|PRD-domain-containing-protein
MLLSTREKEMIALLIKYHGQYITIHDIAQQLAVSSRTIHRELKGVEAYLTSFSLTLERANKKGLRIAGTDSDLNDLKQSIAQHQTIDLSVEEQKVIIIYALIQAKEPVKQYSLAQEIGVSVQTLAKMLDDLELDLNKYQLSLSRKRGEGIYLVGTESKKREFLSQLMVNNLNSTSVYSVIENHFVFHSLNQIHKDFVDLERIFNVERLLMDYLSALPYQLTESSYLTLTVHIVLSISRIKNGEYVALNDDIYDSVQNTFEHKVASELADKLGQIYDVTFNQAEIAFITIHLRGAKRKNLNDTSLNNRCEENKIKAFVNKVEMISGMTFADLDTLVDGLTLHLNPAINRLQANIETYNPLTDMIKFKYPRLFENVRLALNDCWPDLIFPESEIAFIVLHFGGSIKNQGNRFLNILVVCSSGMGTSRLLSTRLEQVFSEIERITQASVSDLKSLDLSQYDGIISTVNLDIDSPYLTVNPLLPDSDISYVAQFLNTKSTFQETHDKSSNMVDKDDVHVETKDVDGNTSFENEQTSYLTSVFEKHLSDEKSEQLLHHMRSGLTLLDSVKIVSTEVKQWQTYIADYLYQCDVINDPTSFAELLEQRLIDNPGWILSPYPVAIPHLRDNMIKHPMILITVLEEPLTLPSIQNDNQTIKYMISMFISDNDFMASLVSDLSEFLSLKLESIDTFMENPQELETLLRNKFLERIKKQFI
>CP029166.1|AWI94306.1|2316209_2316644_+|mannitol-specific-phosphotransferase-enzyme-IIA-component
MSELFSNDNIFLNVNVNSQNEAIEKAGKALVDSGAVTDAYIQAMKDREQVVSTFMGNGLAIPHGTDEAKTNVIHSGLTLLQIPEGVDWDGEVVKVVVGIAGKDGEHLDLLSKIAITFSEEENVDRIVQAKSAEEIKQVFEEADA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP029166_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029166_8

2430067-2430260

Orphan

Consensus_repeat	Method
TGTTGGGGCCCCGCCAACTTGCA	CRT

3 spacers

The CRISPR arrays of CP029166_8

>merge|CP029166|8|2430067-2430260|CRT
TGTTGGGGCCCCGCCAACTTGCACATTATTGTATGCTGACTTTTCGTCACCTTCTGTGTTGGGGCCCCGTTCCCCAACTTGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCTGTCAGCTTCTGTGTTGGGGCCCCGCCAACTTGTA

>CP029166|8|1|2430067-2430260|CRT
TGTTGGGGCCCCGCCAACTTGCA	CATTATTGTATGCTGACTTTTCGTCACCTTCTG
TGTTGGGGCCCCGTTCCCCAACT	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA
TGTTGGGGCCCCGCCAACTTGCA	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG
TGTTGGGGCCCCGCCAACTTGTA

Protein	Signature genes	Signature genes Name	Protein_function
CP029166.1\|AWI94421.1\|2432288_2432735_-\|molybdopterin-synthase-catalytic-subunit	unknown	unknown	gnl\|CDD\|223391
CP029166.1\|AWI94411.1\|2426445_2426697_+\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI94409.1\|2421507_2424675_-\|AcrB/AcrD/AcrF-family-protein	unknown	unknown	gnl\|CDD\|223911
CP029166.1\|AWI94415.1\|2429360_2429711_-\|HTH-type-transcriptional-regulator-SarV	unknown	unknown	gnl\|CDD\|130944
CP029166.1\|AWI94410.1\|2424791_2426057_-\|lipid-II:glycine-glycyltransferase-FemX	unknown	unknown	gnl\|CDD\|225224
CP029166.1\|AWI94426.1\|2435585_2436590_-\|molybdopterin-biosynthesis-protein-MoeB	unknown	unknown	gnl\|CDD\|181084
CP029166.1\|AWI94408.1\|2421003_2421321_+\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI94427.1\|2436759_2437365_-\|molybdenum-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226628
CP029166.1\|AWI94420.1\|2432049_2432283_-\|molybdopterin-synthase-sulfur-carrier-subunit	unknown	unknown	gnl\|CDD\|340452
CP029166.1\|AWI94419.1\|2431443_2432043_-\|molybdenum-cofactor-guanylyltransferase	unknown	unknown	gnl\|CDD\|234725
CP029166.1\|AWI94424.1\|2434552_2435047_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
CP029166.1\|AWI94422.1\|2432748_2433234_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	unknown	unknown	gnl\|CDD\|224677
CP029166.1\|AWI94416.1\|2429836_2430007_+\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI94425.1\|2435048_2435555_-\|molybdenum-cofactor-biosynthesis-protein	unknown	unknown	gnl\|CDD\|223595
CP029166.1\|AWI94423.1\|2433230_2434490_-\|molybdopterin-molybdenumtransferase	unknown	unknown	gnl\|CDD\|238452
CP029166.1\|AWI94407.1\|2420594_2420759_+\|hypothetical-protein	unknown	unknown	unknown
CP029166.1\|AWI94412.1\|2426688_2427453_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|379203
CP029166.1\|AWI94418.1\|2430401_2431424_-\|cyclic-pyranopterin-monophosphate-synthase	unknown	unknown	gnl\|CDD\|274250
CP029166.1\|AWI94414.1\|2428047_2429259_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341042
CP029166.1\|AWI94413.1\|2427614_2428055_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670

Protein	Function_ID	Function_description	E-value
CP029166.1\|AWI94421.1\|2432288_2432735_-\|molybdopterin-synthase-catalytic-subunit	gnl\|CDD\|223391	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism].	5.56799e-58
CP029166.1\|AWI94422.1\|2432748_2433234_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	gnl\|CDD\|224677	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism].	4.35501e-50
CP029166.1\|AWI94415.1\|2429360_2429711_-\|HTH-type-transcriptional-regulator-SarV	gnl\|CDD\|130944	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family. This model represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis. Some members contain two tandem copies of this region. This family is related to the MarR transcriptional regulator family described by pfam01047. [Regulatory functions, DNA interactions].	2.64009e-20
CP029166.1\|AWI94410.1\|2424791_2426057_-\|lipid-II:glycine-glycyltransferase-FemX	gnl\|CDD\|225224	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis].	4.8324e-143
CP029166.1\|AWI94426.1\|2435585_2436590_-\|molybdopterin-biosynthesis-protein-MoeB	gnl\|CDD\|181084	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated.	3.67241e-132
CP029166.1\|AWI94427.1\|2436759_2437365_-\|molybdenum-ABC-transporter-ATP-binding-protein	gnl\|CDD\|226628	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism].	3.32197e-115
CP029166.1\|AWI94420.1\|2432049_2432283_-\|molybdopterin-synthase-sulfur-carrier-subunit	gnl\|CDD\|340452	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins. MoaD, also termed molybdopterin synthase sulfur carrier subunit, or MPT synthase subunit 1, or MPT synthase small subunit, or molybdopterin-converting factor small subunit, or molybdopterin-converting factor subunit 1, is a conserved small sulfur carrier protein that has beta-grasp ubiquitin-like (Ubl) fold involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. MoaD is activated in an ATP-dependent manner by sulfurtransferases similar to the activation mechanism of ubiquitin-activating enzyme E1.	8.16473e-25
CP029166.1\|AWI94424.1\|2434552_2435047_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	9.51833e-97
CP029166.1\|AWI94409.1\|2421507_2424675_-\|AcrB/AcrD/AcrF-family-protein	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
CP029166.1\|AWI94425.1\|2435048_2435555_-\|molybdenum-cofactor-biosynthesis-protein	gnl\|CDD\|223595	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism].	1.02752e-64
CP029166.1\|AWI94423.1\|2433230_2434490_-\|molybdopterin-molybdenumtransferase	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	9.49423e-160
CP029166.1\|AWI94419.1\|2431443_2432043_-\|molybdenum-cofactor-guanylyltransferase	gnl\|CDD\|234725	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed.	6.34008e-66
CP029166.1\|AWI94412.1\|2426688_2427453_-\|VOC-family-protein	gnl\|CDD\|379203	pfam13468, Glyoxalase_3, Glyoxalase-like domain. This domain is related to the Glyoxalase domain pfam00903.	1.50083e-38
CP029166.1\|AWI94418.1\|2430401_2431424_-\|cyclic-pyranopterin-monophosphate-synthase	gnl\|CDD\|274250	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	1.0538e-165
CP029166.1\|AWI94414.1\|2428047_2429259_+\|MFS-transporter	gnl\|CDD\|341042	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.27961e-72
CP029166.1\|AWI94413.1\|2427614_2428055_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.35323e-15

>CP029166.1|AWI94416.1|2429836_2430007_+|hypothetical-protein
MFRFISFGQLVVYSTTFIPKKDILQLNGMECDINVKEPLKIYYVVILKSGIEMIFS
>CP029166.1|AWI94415.1|2429360_2429711_-|HTH-type-transcriptional-regulator-SarV
MSNKVQRFIEAERELSQLKHWLKTTHKISIEEFVVLFKVYEAEKISGKELRDTLHFEMLWDTSKIDVIIRKIYKKELISKLRSETDERQVFYFYSTSQKKLLDKITKEIEVLSVTN
>CP029166.1|AWI94414.1|2428047_2429259_+|MFS-transporter
MTNQGSLNKSPIFTKSFTINFLVNFIVYLCMYLLLVVIAGYSKQAFDASDSLAGLVVGLFIVGSLIGRFATGKFVNQIGPKRLLFIGLIALIITQLLYFIDGSLAFLIFVRLINGIATAVVTTATGTIAAYVTPVNRKSEGISLFSLSLVLGTAIGPFLGMLLITKYAIDLLFIICVILGILGLIISLFIKVDFEVTNNKTETNVIDKPRFSIHQFIAKEAIPVAVIMLLIGVTYASILTYLQAFALERHLVTAASYFFICYAIASLITRPIAGRLMDDKNENIIVYPAFIMLFLSFVCLISSYQSWLILLAGACLGLGYGNLSSAMQSIAIKVSPPIKYGIATSTFYVGLDAGVGFGPSFLGLFTHMFSYSEIFGFMAALAIITMLVYFLIHGRHVTRNAMN
>CP029166.1|AWI94413.1|2427614_2428055_+|MarR-family-transcriptional-regulator
MLSQEFFNSFITIYRPYLKLAEPILEKHNIYYGQWLILRDIAKHQPTTLIEISHRRAIEKPTARKTLKALIENDLITVENSLEDKRQKFLTLTPKGHELYEIVCLDVQKLQQAVVAKTNISQDQMQETINVMNQIHEILLKEAHND
>CP029166.1|AWI94412.1|2426688_2427453_-|VOC-family-protein
MILKFDHIIHYIDQLDRFSFPGDVIKLHSGGYHHKYGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGGVAFATQIVQEKYEQGFKNICLRTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDEIKPPFFIQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEENDHYTDLILKNDDIYFRIEDGKVSKYHSVIIKDAQATSPYSIFIRGAIYRFEPLV
>CP029166.1|AWI94411.1|2426445_2426697_+|hypothetical-protein
MRTIILSLFIIMNIVAIIMTLSQPLTVNYFSLRVILIFFTFILSIFFILIKSSRLNNILTILSIVLVIIHMGILAHSTYVYLY
>CP029166.1|AWI94410.1|2424791_2426057_-|lipid-II:glycine-glycyltransferase-FemX
MEKMHITNQEHDAFVKSHPNGDLLQLTKWAETKKLTGWYARRIAVGRDGEVQGVAQLLFKKVPKLPYTLCYISRGFVVDYSNKEALNALLDSAKEIAKAEKAYAIKIDPDVEVDKGTDALQNLKALGFKHKGFKEGLSKDYIQPRMTMITPIDKNDDELLNSFERRNRSKVRLALKRGTTVERSDREGLKTFAELMKITGERDGFLTRDISYFENIYDALHEDGDAELFLVKLDPKENIAKVNQELNELHAEIAKWQQKMKTSEKQAKKAQNMINDAQNKIAKNEDLKRDLEALEKEHPEGIYLSGALLMFAGSKSYYLYGASSNEFRDFLPNHHMQYTMMKYAREHGATTYDFGGTDNDPDKDSEHYGLWAFKKVWGTYLSEKIGEFDYVLNQPLYQLIEQVKPRLTKAKIKISRKLKRK
>CP029166.1|AWI94409.1|2421507_2424675_-|AcrB/AcrD/AcrF-family-protein
MIKKLLQFSLGNKFAIFLMVVLVVLGGVYASAKLKLELLPNVQNPVISVTTTMPGATPQSTQDEISSKIDNQVRSLAYVKNVKTQSIQNASIVTVEYENNTDMDKAEEQLKKEIDKIKFKDEVGQPELRRNSMDAFPVLAYSFSNKENDLKKVTKVLNEQLIPKLQTVDGVQNAQLNGQTNREITLKFKQNELEKYGLTADDVENYLKTATRTTPLGLFQFGDKDKSIVVDGQYQSVDAFKNINIPLTLAGGQGQSQSQSDNKQNSAMSDVNQASPQQNSKASAPNNISGMPTAKLGDLADITVGDVRTSISKTNGKDAVNLQITKAQDANTVQVAKDVQRKIDTFVDENKDFNVTKTMDTAKPVEKSLYTMVEKASLGTIVAIIVILLFLRNIRTTAISIISIPLSLLMALIALKLSDVSLNILTLGALTVAIGRVIDDSIVVVENIYRRLTDSEEQLKGENLIISATTEVFKPIMSSTLVTIIVFLPLVFVSGSVGEMFRPFALAIAFSLLASLLVSITLVPALAATLFKKGVKRRNKQHQEGLGVVSTTYKKVLHWSLNHKWIVIILSTLILVATIVFGGPRLGTSFISAGDDKFLAITYTPKPGETEQAVLNHAKDVEKYLKQKKHVKTIQYSVGGSSPVDPTGSTNSMAIMVEYDNDTPNFDVEADKVIKHADGFKHPGEWKNQDLGTGAGNKSVEVTVKGPSMDAIKSTVKDIEQKMKQVKGLANVKSDLSQTYDQYEIKVDQNKAAENGISASQLAMHLNENLPEKTVTTVKENGKTVDVKVKQNKQTDWSEDKLNNITLKKPTGGTIKLGDIATLVKTTTPSKLTQEQGDYATTVSAKVTNKDVGGTTRQVMSKINNLDKPNNVKVNIGGASDDINNAMTQLAFAMLAAIIIVYLILVITFKGGLAPFTILFSLPFTVIGVIIALLITGETISVPSLIGMLMLIGIVVTNAIVLIDRVINNEQQGMEMKEALIEAGGTRIRPILMTAIATIGALVPLLFGQDSSILISKGLAATVIGGLISSTLLTLVVVPVIYEILFTLKKRFTKR
>CP029166.1|AWI94408.1|2421003_2421321_+|hypothetical-protein
MQFYLILLAILYLIVSFISIFKMEVVFTRILRIIMGVLLLFVLALTTMSFPKENWWVFIVLLLLVGNVEVTGFKMLKKDLKGVNILNLMSLFIFVIYFILTIVLF
>CP029166.1|AWI94407.1|2420594_2420759_+|hypothetical-protein
MSLENQLAELKYDYVRLQGDIEKRESLNLDTSALVRQLKDIENEIRNVRAQMQD
>CP029166.1|AWI94418.1|2430401_2431424_-|cyclic-pyranopterin-monophosphate-synthase
MVEQIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFYGCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQRKKINMNYIGG
>CP029166.1|AWI94419.1|2431443_2432043_-|molybdenum-cofactor-guanylyltransferase
MKAIILAGGHSVRFGKPKAFAEVNGETFYSRVIKTLESTNMFNEIIISTNAQLATQFKYPNVVIDDENHNDKGPLAGIYTIMKQHPEEELFFVVSVDTPVITGKAVSTLYQFLVSHLIENHLDVAAFKEDGRFIPTIAFYSPNALGAITKALHSDNYSFKNVYHELSTDYLDVRDVDAPSYWYKNINYQHDLDALIQKL
>CP029166.1|AWI94420.1|2432049_2432283_-|molybdopterin-synthase-sulfur-carrier-subunit
MKVLYFAEIKDILQKAQEDIVLEQALTVQQFEDLLFERYPQINNKKFQVAVNEEFVQKSDFIQPNDTVALIPPVSGG
>CP029166.1|AWI94421.1|2432288_2432735_-|molybdopterin-synthase-catalytic-subunit
MKQFEIVTEPIQTEQYREFTINEYQGAVVVFTGHVREWTKGVKTEYLEYEAYIPMAEKKLAQIGDEINEKWPGTITSIVHRIGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPIWKKEIWEDGSKWQGHQKGNYEEAKREE
>CP029166.1|AWI94422.1|2432748_2433234_-|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B
MILQIVGYKKSGKTTLMRHIVSFLKSHGYTVATIKHHGHGKEDIQLQDSDVDHMKHFEAGADQSIVQGFQYQQTVTRVDNQNLTQIIEKSVTIDTNIVLVEGFKNADFEKVVVYRNEEELQVLQQLSNVCYSINVREHEDFTAFEQWLLNKIKNDCDTQLT
>CP029166.1|AWI94423.1|2433230_2434490_-|molybdopterin-molybdenumtransferase
MVVEKRNPIPVKEAIQRIVNQQSSMPAITVALEKSLNHILAEDIVATYDIPRFDKSPYDGFAIRSVDSQGASGQNRIEFKVIDHIGAGSVSDKLVGDHEAVRIMTGAQIPNGADAVVMFEQTIELEDTFTIRKPFSKNENISLKGEETKTGDVVLKKGQVINPGAIAVLATYGYAEVKVIKQPSVAVIATGSELLDVNDVLEDGKIRNSNGPMIRALAEKLGLEVGIYKTQKDDLDSGIQVVKEAMEKHDIVITTGGVSVGDFDYLPEIYKAVKAEVLFNKVAMRPGSVTTVAFVDGKYLFGLSGNPSACFTGFELFVKPAVKHMCGALEVFPQIIKATLMEDFTKANPFTRFIRAKATLTSAGATVVPSGFNKSGAVVAIAHANCMVMLPGGSRGFKAGHTVDIILTESDAAEEELLL
>CP029166.1|AWI94424.1|2434552_2435047_+|cyclic-pyranopterin-monophosphate-synthase-MoaC
MTEFTHINQQGHAKMVDVSDKQITKRTAVAHSSITVNETIFKQISNNTNTKGNVLNTAQIAGIIAAKNTSTLIPMCHPLPLTGIDVHFSWDETNAPLYTLNIQTTVSTTGKTGVEMEALTAASATALTIYDMTKAVDKGMIIGETYLESKSGGKSGDFQRQSNQ
>CP029166.1|AWI94425.1|2435048_2435555_-|molybdenum-cofactor-biosynthesis-protein
MGEHQNVKLNRTVKAAVLTVSDTRDFDTDKGGQCVRQLLQADDVEVSDAHYTIVKDEKVAITTQVKKWLEEDIDVIITTGGTGIAQRDVTIEAVKPLLTKEIDGFGELFRYLSYVEDVGTRALLSRAVAGTVNNKLIFSIPGSTGAVKLALEKLIKPELNHLIHELTK
>CP029166.1|AWI94426.1|2435585_2436590_-|molybdopterin-biosynthesis-protein-MoeB
MSQERYSRQILFKQIGEIGQSKINQKCALIIGMGALGTHVAEGLVRAGIAKLIIVDRDYIEFSNLQRQTLFTEEDALKMMPKVVAAKKHLLALRSDVDIDDYIAHVDYYFLETHGQDVDVIIDATDNFETRQLINDFAYKYRIPWIYGGVVQSTYTEAAFIPGKTPCFNCLVPQLPALNLTCDTVGVIQPAVTMATSLQLRDAMKVLTEQPIDTKITYGDIWEGSHYSFGFSKMQRSDCTTCGDVPSYPYLNKNEQRYATLCGRDTVQYENASITHDILVQFLKQHQLNYRSNSYMVMFEFKGHRIVAFKGGRFLIHGMTRTSDATHLMNLLFG
>CP029166.1|AWI94427.1|2436759_2437365_-|molybdenum-ABC-transporter-ATP-binding-protein
MLKINVKYQLKNTLIRINIDDTEPKIYAVRGPSGIGKTTVLNMIAGLRKADEAIIEVNGQLLTDTAKNVNVKIQQRRIGYLFQDYQLFPNMTVYKNITFMAEPSEHIDQLIQTLNIDHLMKQYPMTLSGGEAQRVALARALSTKPDLILLDEPFSSLDDTTKDESITLVKRIFNEWQIPIIFVTHSNYEAEQMAHEIITIG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP029166_5	5.1\|931066\|34\|CP029166\|CRISPRCasFinder	931066-931099	34	CP029166.1	1415202-1415235	0	1.0
CP029166_5	5.1\|931066\|34\|CP029166\|CRISPRCasFinder	931066-931099	34	CP029166.1	1504388-1504421	0	1.0
CP029166_8	8.2\|2430146\|36\|CP029166\|CRT	2430146-2430181	36	CP029166.1	1213878-1213913	0	1.0
CP029166_4	4.1\|887119\|26\|CP029166\|CRISPRCasFinder	887119-887144	26	CP029166.1	2872366-2872391	1	0.962
CP029166_8	8.2\|2430146\|36\|CP029166\|CRT	2430146-2430181	36	CP029166.1	1907017-1907052	1	0.972
CP029166_4	4.1\|887119\|26\|CP029166\|CRISPRCasFinder	887119-887144	26	CP029166.1	995793-995818	2	0.923
CP029166_8	8.1\|2430090\|33\|CP029166\|CRT	2430090-2430122	33	CP029166.1	887155-887187	2	0.939
CP029166_8	8.1\|2430090\|33\|CP029166\|CRT	2430090-2430122	33	CP029166.1	1213934-1213966	2	0.939
CP029166_8	8.1\|2430090\|33\|CP029166\|CRT	2430090-2430122	33	CP029166.1	1415157-1415189	2	0.939
CP029166_8	8.1\|2430090\|33\|CP029166\|CRT	2430090-2430122	33	CP029166.1	1504434-1504466	2	0.939
CP029166_8	8.1\|2430090\|33\|CP029166\|CRT	2430090-2430122	33	CP029166.1	2067705-2067737	2	0.939
CP029166_8	8.1\|2430090\|33\|CP029166\|CRT	2430090-2430122	33	CP029166.1	2708192-2708224	2	0.939
CP029166_8	8.2\|2430146\|36\|CP029166\|CRT	2430146-2430181	36	CP029166.1	1728464-1728499	2	0.944
CP029166_8	8.2\|2430146\|36\|CP029166\|CRT	2430146-2430181	36	CP029166.1	2078508-2078543	2	0.944
CP029166_8	8.3\|2430205\|33\|CP029166\|CRT	2430205-2430237	33	CP029166.1	887155-887187	2	0.939
CP029166_8	8.3\|2430205\|33\|CP029166\|CRT	2430205-2430237	33	CP029166.1	1213934-1213966	2	0.939
CP029166_8	8.3\|2430205\|33\|CP029166\|CRT	2430205-2430237	33	CP029166.1	1415157-1415189	2	0.939
CP029166_8	8.3\|2430205\|33\|CP029166\|CRT	2430205-2430237	33	CP029166.1	2067705-2067737	2	0.939
CP029166_8	8.3\|2430205\|33\|CP029166\|CRT	2430205-2430237	33	CP029166.1	2708192-2708224	2	0.939

1. spacer 5.1|931066|34|CP029166|CRISPRCasFinder matches to position: 1415202-1415235, mismatch: 0, identity: 1.0

attgggaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
**********************************

2. spacer 5.1|931066|34|CP029166|CRISPRCasFinder matches to position: 1504388-1504421, mismatch: 0, identity: 1.0

attgggaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
**********************************

3. spacer 8.2|2430146|36|CP029166|CRT matches to position: 1213878-1213913, mismatch: 0, identity: 1.0

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttctttttgaaattctcta	Protospacer
************************************

4. spacer 4.1|887119|26|CP029166|CRISPRCasFinder matches to position: 2872366-2872391, mismatch: 1, identity: 0.962

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctttgttggggccccg	Protospacer
************ *************

5. spacer 8.2|2430146|36|CP029166|CRT matches to position: 1907017-1907052, mismatch: 1, identity: 0.972

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttcttttcgaaattctcta	Protospacer
************************.***********

6. spacer 4.1|887119|26|CP029166|CRISPRCasFinder matches to position: 995793-995818, mismatch: 2, identity: 0.923

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccaccagcctctgtgttggggccccg	Protospacer
**.*****.*****************

7. spacer 8.1|2430090|33|CP029166|CRT matches to position: 887155-887187, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

8. spacer 8.1|2430090|33|CP029166|CRT matches to position: 1213934-1213966, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

9. spacer 8.1|2430090|33|CP029166|CRT matches to position: 1415157-1415189, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

10. spacer 8.1|2430090|33|CP029166|CRT matches to position: 1504434-1504466, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcatcttctg	Protospacer
********** ***************.******

11. spacer 8.1|2430090|33|CP029166|CRT matches to position: 2067705-2067737, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

12. spacer 8.1|2430090|33|CP029166|CRT matches to position: 2708192-2708224, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

13. spacer 8.2|2430146|36|CP029166|CRT matches to position: 1728464-1728499, mismatch: 2, identity: 0.944

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaattctcta	Protospacer
*******.****************.***********

14. spacer 8.2|2430146|36|CP029166|CRT matches to position: 2078508-2078543, mismatch: 2, identity: 0.944

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttcctttcgaaattctcta	Protospacer
********************.***.***********

15. spacer 8.3|2430205|33|CP029166|CRT matches to position: 887155-887187, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

16. spacer 8.3|2430205|33|CP029166|CRT matches to position: 1213934-1213966, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

17. spacer 8.3|2430205|33|CP029166|CRT matches to position: 1415157-1415189, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

18. spacer 8.3|2430205|33|CP029166|CRT matches to position: 2067705-2067737, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

19. spacer 8.3|2430205|33|CP029166|CRT matches to position: 2708192-2708224, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP029166_4	4.1\|887119\|26\|CP029166\|CRISPRCasFinder	887119-887144	26	NZ_CP022541	Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence	333735-333760	5	0.808
CP029166_4	4.1\|887119\|26\|CP029166\|CRISPRCasFinder	887119-887144	26	NZ_CP034332	Tabrizicola piscis strain K13M18 plasmid unnamed4, complete sequence	3359-3384	5	0.808
CP029166_4	4.1\|887119\|26\|CP029166\|CRISPRCasFinder	887119-887144	26	NZ_CP022605	Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence	715511-715536	5	0.808

1. spacer 4.1|887119|26|CP029166|CRISPRCasFinder matches to NZ_CP022541 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence) position: , mismatch: 5, identity: 0.808

ccgccagcttctgtgttggggccccg	CRISPR spacer
acgccagcttctgtgttgaggcctta	Protospacer
 *****************.****...

2. spacer 4.1|887119|26|CP029166|CRISPRCasFinder matches to NZ_CP034332 (Tabrizicola piscis strain K13M18 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.808

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctgtgtctgggcctac	Protospacer
****************. *****.

3. spacer 4.1|887119|26|CP029166|CRISPRCasFinder matches to NZ_CP022605 (Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctgtgtttggccctga	Protospacer
***************** ** **. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

421666 : 479454

Staphylococcus_phage(46.34%)

integrase,coat,terminase

attL 424439:424455|attR 469657:469673

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI92438.1\|421666_421858_-	hypothetical protein	U3PCX8	Staphylococcus_phage	4.9e-23	80.0
AWI92439.1\|421841_422111_-	hypothetical protein	NA	NA	NA	NA
AWI92440.1\|422101_422398_+	30S ribosomal protein S6	NA	NA	NA	NA
AWI92441.1\|422418_422922_+	single-stranded DNA-binding protein	A0A1W6JPL9	Staphylococcus_phage	1.2e-60	74.7
AWI92442.1\|422973_423216_+	30S ribosomal protein S18	NA	NA	NA	NA
AWI92443.1\|423444_424242_-	growth inhibitor PemK	Q4ZE81	Staphylococcus_phage	7.1e-108	100.0
AWI92444.1\|424265_425483_-\|integrase	site-specific integrase	Q4ZE80	Staphylococcus_phage	1.3e-100	47.8
424439:424455	attL	NA	NA	NA	NA
AWI92445.1\|425496_426885_-	SAP domain protein	NA	NA	NA	NA
AWI92446.1\|426911_427484_-	XRE family transcriptional regulator	NA	NA	NA	NA
AWI92447.1\|427655_427877_+	XRE family transcriptional regulator	A0A2H4JFN1	uncultured_Caudovirales_phage	2.0e-07	43.5
AWI92448.1\|427877_428150_+	pathogenicity island protein	Q4ZE77	Staphylococcus_phage	7.7e-38	84.4
AWI92449.1\|428161_428308_+	pathogenicity island protein	NA	NA	NA	NA
AWI92450.1\|428300_428510_+	pathogenicity island protein	Q4ZE76	Staphylococcus_phage	8.5e-29	94.2
AWI92451.1\|428512_428830_+	DUF1474 domain-containing protein	A0A1W6JQH0	Staphylococcus_phage	9.3e-19	53.4
AWI92452.1\|428893_429763_+	mobile element-associated protein	Q4ZE74	Staphylococcus_phage	1.5e-164	96.9
AWI92453.1\|429776_431486_+	DUF927 domain-containing protein	Q4ZE73	Staphylococcus_phage	0.0e+00	96.3
AWI92454.1\|431815_432196_+	hypothetical protein	Q4ZE71	Staphylococcus_phage	7.6e-68	97.6
AWI92455.1\|432192_432834_+	pathogenicity island protein	Q4ZE67	Staphylococcus_phage	1.0e-109	92.0
AWI92456.1\|433180_433522_+	pathogenicity island protein	Q4ZE66	Staphylococcus_phage	1.1e-57	99.1
AWI92457.1\|433533_434112_+	pathogenicity island protein	A0A2H4JBG0	uncultured_Caudovirales_phage	4.0e-28	37.9
AWI92458.1\|434129_434348_+	hypothetical protein	NA	NA	NA	NA
AWI92459.1\|434398_434926_+\|coat	spore coat protein	A0A1W6JQH7	Staphylococcus_phage	1.7e-86	96.6
AWI92460.1\|434928_435270_+	pathogenicity island protein	A0A1W6JQM3	Staphylococcus_phage	1.7e-58	100.0
AWI92461.1\|435266_435836_+\|terminase	terminase small subunit	Q4ZE85	Staphylococcus_phage	1.4e-102	100.0
AWI92462.1\|436591_436873_+	hypothetical protein	Q4ZE84	Staphylococcus_phage	3.7e-19	85.0
AWI92463.1\|436990_437503_+	hypothetical protein	Q4ZE83	Staphylococcus_phage	1.4e-69	100.0
AWI92464.1\|437518_437698_+	hypothetical protein	NA	NA	NA	NA
AWI94896.1\|438301_439240_-	Abi family protein	NA	NA	NA	NA
AWI92465.1\|439278_439590_-\|integrase	integrase	Q4ZE80	Staphylococcus_phage	5.5e-24	70.5
AWI92466.1\|439667_439826_-\|integrase	integrase	Q4ZE80	Staphylococcus_phage	6.7e-10	66.7
AWI92467.1\|440185_440797_+	toxin	NA	NA	NA	NA
AWI92468.1\|441165_441534_+	YxeA family protein	NA	NA	NA	NA
AWI92469.1\|441714_442287_+	peptidase	NA	NA	NA	NA
AWI92470.1\|442424_442688_-	XRE family transcriptional regulator	NA	NA	NA	NA
AWI92471.1\|442987_443239_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
AWI92472.1\|443277_443487_-	hypothetical protein	NA	NA	NA	NA
AWI92473.1\|443664_444246_+	histidine phosphatase family protein	NA	NA	NA	NA
AWI92474.1\|444311_444695_-	hypothetical protein	NA	NA	NA	NA
AWI92475.1\|444949_445576_-	NDxxF motif lipoprotein	NA	NA	NA	NA
AWI92476.1\|445648_445942_-	hypothetical protein	NA	NA	NA	NA
AWI92477.1\|446020_447544_-	alkyl hydroperoxide reductase subunit F	A0A249XZT7	Enterococcus_phage	1.9e-40	33.6
AWI92478.1\|447559_448129_-	peroxiredoxin	NA	NA	NA	NA
AWI92479.1\|449466_450855_-	L-cystine transporter	NA	NA	NA	NA
AWI92480.1\|450939_451041_+	hypothetical protein	NA	NA	NA	NA
AWI92481.1\|451248_451506_-	hypothetical protein	NA	NA	NA	NA
AWI92482.1\|451831_452776_-	hypothetical protein	NA	NA	NA	NA
AWI92483.1\|452893_453556_-	hypothetical protein	NA	NA	NA	NA
AWI92484.1\|453698_454106_-	hypothetical protein	NA	NA	NA	NA
AWI92485.1\|454618_455197_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA
AWI92486.1\|455196_456465_+	purine permease	NA	NA	NA	NA
AWI92487.1\|456502_457969_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	5.2e-96	40.5
AWI92488.1\|457993_459535_+	GMP synthase (glutamine-hydrolyzing)	A0A1V0SH76	Hokovirus	1.2e-23	32.6
AWI92489.1\|459602_460796_-\|integrase	site-specific integrase	A0A0S2MV79	Bacillus_phage	8.3e-44	34.2
AWI92490.1\|460822_461023_-	DUF3173 domain-containing protein	NA	NA	NA	NA
AWI92491.1\|461520_461751_-	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	1.0e-27	78.9
AWI92492.1\|461747_462230_-	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	8.5e-48	68.6
AWI92493.1\|462358_462469_-	hypothetical protein	NA	NA	NA	NA
AWI92494.1\|462700_463054_+	XRE family transcriptional regulator	A0A1S5SFA6	Streptococcus_phage	2.2e-53	89.7
AWI92495.1\|463111_463279_-	conjugal transfer protein	D0R0F6	Streptococcus_phage	2.3e-13	62.0
AWI92496.1\|463397_465317_-	tetracycline resistance ribosomal protection protein Tet(M)	A0A1S5SF82	Streptococcus_phage	0.0e+00	97.2
AWI92497.1\|465332_465419_-	tetracycline resistance protein	NA	NA	NA	NA
AWI94897.1\|465693_466632_-	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	1.9e-83	56.6
AWI92498.1\|466639_467662_-	peptidase P60	A0A1S5SEZ8	Streptococcus_phage	3.1e-132	75.5
AWI92499.1\|467658_469686_-	hypothetical protein	A0A1S5SF30	Streptococcus_phage	2.3e-195	65.5
469657:469673	attR	NA	NA	NA	NA
AWI92500.1\|469682_472136_-	ATP/GTP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	78.9
AWI92501.1\|472119_472515_-	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	5.9e-47	72.6
AWI92502.1\|472586_473225_-	hypothetical protein	NA	NA	NA	NA
AWI92503.1\|473280_473781_-	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	1.7e-54	63.0
AWI92504.1\|473841_474621_-	hypothetical protein	NA	NA	NA	NA
AWI92505.1\|474662_474884_-	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	3.1e-29	93.2
AWI92506.1\|474880_475171_-	hypothetical protein	NA	NA	NA	NA
AWI92507.1\|475167_476352_-	XRE family transcriptional regulator	A0A1S5SEX3	Streptococcus_phage	1.4e-160	68.1
AWI92508.1\|476533_477937_-	DUF87 domain-containing protein	A0A1S5SFB5	Streptococcus_phage	2.2e-176	66.5
AWI92509.1\|477958_478732_-	hypothetical protein	NA	NA	NA	NA
AWI92510.1\|478741_479119_-	DUF961 domain-containing protein	A0A1S5SF96	Streptococcus_phage	9.6e-47	76.4
AWI92511.1\|479139_479454_-	DUF961 domain-containing protein	A0A1S5SF38	Streptococcus_phage	1.2e-42	77.7

DBSCAN-SWA_2

818861 : 826681

Hokovirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI92824.1\|818861_819917_-	two-component sensor histidine kinase	A0A1V0SGX0	Hokovirus	2.1e-14	30.0
AWI92825.1\|819916_820603_-	DNA-binding response regulator	NA	NA	NA	NA
AWI92826.1\|820577_821051_-	DoxX family protein	NA	NA	NA	NA
AWI92827.1\|821392_821833_-	hypothetical protein	NA	NA	NA	NA
AWI92828.1\|822112_822697_-	hypothetical protein	NA	NA	NA	NA
AWI92829.1\|822795_823509_-	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	6.5e-52	43.5
AWI92830.1\|823512_823932_-	6-carboxytetrahydropterin synthase QueD	S4U060	uncultured_phage	6.3e-07	28.7
AWI92831.1\|823933_824602_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	9.6e-66	57.5
AWI92832.1\|824952_825546_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	4.4e-38	42.9
AWI92833.1\|825529_826681_+	anthranilate synthase component I family protein	A0A0B5J984	Pandoravirus	1.6e-23	35.7

DBSCAN-SWA_3

838653 : 853270

uncultured_Caudovirales_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI92843.1\|838653_839712_+	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	7.9e-22	26.7
AWI92844.1\|840062_840605_+	5'(3')-deoxyribonucleotidase	NA	NA	NA	NA
AWI92845.1\|840776_840872_+	hypothetical protein	NA	NA	NA	NA
AWI92846.1\|841284_842202_-	lipid kinase	A0A1V0SBJ0	Catovirus	3.7e-07	22.0
AWI92847.1\|842292_842394_+	hypothetical protein	NA	NA	NA	NA
AWI92848.1\|842471_843977_-	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	2.0e-58	32.2
AWI92849.1\|844042_844288_-	hypothetical protein	NA	NA	NA	NA
AWI92850.1\|844317_844818_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	5.9e-52	71.5
AWI92851.1\|844837_845704_-	EamA/RhaT family transporter	NA	NA	NA	NA
AWI92852.1\|846088_846355_+	ribonucleoside-diphosphate reductase	NA	NA	NA	NA
AWI92853.1\|846504_846903_+	protein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	1.2e-52	72.0
AWI92854.1\|846865_848971_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	91.7
AWI92855.1\|849088_850060_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	4.2e-171	91.3
AWI92856.1\|850403_850559_+	hypothetical protein	NA	NA	NA	NA
AWI94912.1\|850597_851569_+	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	4.3e-139	78.9
AWI92857.1\|851555_852512_+	iron ABC transporter permease	A0A2H4J116	uncultured_Caudovirales_phage	1.2e-05	57.8
AWI92858.1\|852508_853270_+	iron ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	8.5e-18	31.6

DBSCAN-SWA_4

932603 : 953812

Staphylococcus_phage(77.78%)

integrase,coat,terminase

attL 935140:935156|attR 951075:951091

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI92941.1\|932603_933629_+	methionine import ATP-binding protein MetN 2	G9BWD6	Planktothrix_phage	1.2e-27	36.8
AWI92942.1\|933621_934317_+	ABC transporter permease	NA	NA	NA	NA
AWI92943.1\|934334_935156_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
935140:935156	attL	NA	NA	NA	NA
AWI92944.1\|935298_936519_-\|integrase	site-specific integrase	Q4ZE80	Staphylococcus_phage	6.4e-100	47.5
AWI92945.1\|936607_937336_-	exotoxin	A0EX09	Staphylococcus_phage	1.9e-22	32.3
AWI92946.1\|937359_938088_-	exotoxin	A0EX09	Staphylococcus_phage	2.3e-28	35.4
AWI92947.1\|938157_938589_-	hypothetical protein	Q4ZCB6	Staphylococcus_virus	5.1e-36	56.0
AWI92948.1\|938605_939064_-	ImmA/IrrE family metallo-endopeptidase	A0A0H4J322	Staphylococcus_phage	5.1e-66	83.0
AWI92949.1\|939075_939408_-	XRE family transcriptional regulator	A0A1J0MFC1	Staphylococcus_phage	1.6e-37	74.5
AWI92950.1\|939600_939864_+	XRE family transcriptional regulator	A0A2H4J9X2	uncultured_Caudovirales_phage	5.3e-36	94.8
AWI92951.1\|939856_940129_+	pathogenicity island protein	Q4ZE77	Staphylococcus_phage	9.7e-41	90.0
AWI92952.1\|940140_940287_+	pathogenicity island protein	NA	NA	NA	NA
AWI92953.1\|940279_940489_+	pathogenicity island protein	Q4ZE76	Staphylococcus_phage	1.7e-29	94.2
AWI92954.1\|940491_940812_+	DUF1474 domain-containing protein	Q4ZE75	Staphylococcus_phage	1.3e-20	51.9
AWI92955.1\|940875_941745_+	mobile element-associated protein	A0A1W6JQL5	Staphylococcus_phage	3.4e-156	92.7
AWI92956.1\|941761_943219_+	virulence-associated protein E	A0A1W6JQD6	Staphylococcus_phage	1.0e-277	96.1
AWI92957.1\|943519_943882_+	pathogenicity island protein	A0A1W6JQD5	Staphylococcus_phage	8.9e-66	99.2
AWI92958.1\|943883_944168_+	pathogenicity island protein	A0A1W6JQE4	Staphylococcus_phage	1.9e-47	95.7
AWI92959.1\|944164_944806_+	pathogenicity island protein	Q4ZE67	Staphylococcus_phage	1.5e-108	91.5
AWI92960.1\|945322_945664_+	pathogenicity island protein	Q4ZE66	Staphylococcus_phage	1.4e-57	99.1
AWI92961.1\|945675_946254_+	pathogenicity island protein	A0A2H4JBG0	uncultured_Caudovirales_phage	1.4e-28	38.4
AWI92962.1\|946271_946490_+	hypothetical protein	NA	NA	NA	NA
AWI92963.1\|946540_947068_+\|coat	spore coat protein	A0A1W6JQH7	Staphylococcus_phage	1.7e-86	96.6
AWI92964.1\|947070_947412_+	pathogenicity island protein	A0A1W6JQM3	Staphylococcus_phage	1.7e-58	100.0
AWI92965.1\|947408_947978_+\|terminase	terminase small subunit	Q4ZE85	Staphylococcus_phage	1.4e-102	100.0
AWI92966.1\|948285_949086_+	enterotoxin	A0A097PAT7	Streptococcus_pyogenes_phage	1.0e-53	49.4
AWI92967.1\|949163_949721_-	DUF4888 domain-containing protein	A0A1W6JQE5	Staphylococcus_phage	1.4e-70	73.8
AWI92968.1\|950093_950246_+	hypothetical protein	A0A0F6N3H2	Staphylococcus_phage	7.6e-19	98.0
AWI92969.1\|950316_950427_+	hypothetical protein	W5R8J7	Staphylococcus_phage	7.1e-11	91.7
AWI92970.1\|950413_950614_+	hypothetical protein	W5R9N2	Staphylococcus_phage	3.7e-29	100.0
AWI92971.1\|951444_951639_+	CsbD family protein	NA	NA	NA	NA
951075:951091	attR	NA	NA	NA	NA
AWI92972.1\|951871_952723_-	DUF368 domain-containing protein	NA	NA	NA	NA
AWI92973.1\|953050_953812_+	Fe-S cluster assembly ATPase SufC	A0A1V0SE00	Indivirus	4.4e-06	23.3

DBSCAN-SWA_5

1040897 : 1095764

Streptococcus_phage(28.57%)

tRNA,holin,bacteriocin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI93058.1\|1040897_1041887_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
AWI93059.1\|1042181_1042577_+	transcriptional regulator Spx	NA	NA	NA	NA
AWI93060.1\|1042947_1043667_+	adaptor protein MecA	NA	NA	NA	NA
AWI93061.1\|1043787_1044045_+	competence protein	NA	NA	NA	NA
AWI93062.1\|1044050_1044773_+	competence protein	NA	NA	NA	NA
AWI93063.1\|1044820_1046629_+	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	9.3e-47	24.4
AWI93064.1\|1047088_1047895_-	DsbA family protein	NA	NA	NA	NA
AWI93065.1\|1047917_1048283_-	globin	NA	NA	NA	NA
AWI93066.1\|1048386_1048980_-	CYTH domain-containing protein	NA	NA	NA	NA
AWI93067.1\|1049165_1049513_+	hypothetical protein	NA	NA	NA	NA
AWI93068.1\|1049529_1050165_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA
AWI93069.1\|1050181_1050991_+	NAD(+) kinase	NA	NA	NA	NA
AWI93070.1\|1050987_1051842_+	RluA family pseudouridine synthase	NA	NA	NA	NA
AWI93071.1\|1051862_1053248_+	magnesium transporter	NA	NA	NA	NA
AWI93072.1\|1053257_1055102_+	sodium:proton antiporter	NA	NA	NA	NA
AWI93073.1\|1055379_1056150_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA
AWI93074.1\|1056344_1057430_-	AI-2E family transporter	NA	NA	NA	NA
AWI93075.1\|1057771_1059340_+	alanine:cation symporter family protein	NA	NA	NA	NA
AWI93076.1\|1059481_1060240_+	esterase family protein	NA	NA	NA	NA
AWI93077.1\|1060433_1060943_+	hypothetical protein	NA	NA	NA	NA
AWI93078.1\|1061055_1062264_-	MFS transporter	NA	NA	NA	NA
AWI93079.1\|1062223_1063399_-	diacylglycerol beta-glucosyltransferase	NA	NA	NA	NA
AWI93080.1\|1063831_1065313_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA
AWI93081.1\|1065296_1065557_+	hypothetical protein	NA	NA	NA	NA
AWI93082.1\|1065556_1067119_+	peptide chain release factor 3	A0A1S5SF82	Streptococcus_phage	4.9e-36	28.2
AWI93083.1\|1067420_1068224_+	hypothetical protein	S5MAL1	Bacillus_phage	1.6e-30	40.5
AWI93084.1\|1068442_1070767_+	PDZ domain-containing protein	W5SAB9	Pithovirus	2.8e-11	27.4
AWI93085.1\|1070783_1072142_+	TrkH family potassium uptake protein	NA	NA	NA	NA
AWI93086.1\|1072280_1073792_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA
AWI93087.1\|1074278_1074848_-	competence protein ComK	NA	NA	NA	NA
AWI93088.1\|1075057_1075276_+	IDEAL domain-containing protein	NA	NA	NA	NA
AWI93089.1\|1075356_1076343_-	lipoate--protein ligase	NA	NA	NA	NA
AWI93090.1\|1076541_1076718_+	DUF2187 domain-containing protein	NA	NA	NA	NA
AWI93091.1\|1076732_1077335_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AWI94916.1\|1077635_1077713_+\|holin	putative holin-like toxin	NA	NA	NA	NA
AWI93092.1\|1078251_1078353_+	hypothetical protein	NA	NA	NA	NA
AWI94917.1\|1078362_1078635_+\|bacteriocin	lactococcin 972 family bacteriocin	NA	NA	NA	NA
AWI93093.1\|1078678_1080643_+\|bacteriocin	bacteriocin-associated integral membrane family protein	NA	NA	NA	NA
AWI93094.1\|1080645_1080966_+	YxeA family protein	NA	NA	NA	NA
AWI93095.1\|1080962_1081604_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.2e-19	33.7
AWI93096.1\|1081691_1081982_-	hypothetical protein	NA	NA	NA	NA
AWI93097.1\|1082260_1082548_+	hypothetical protein	NA	NA	NA	NA
AWI93098.1\|1082553_1084035_+	glycosyl transferase family 1	NA	NA	NA	NA
AWI93099.1\|1084123_1084480_-	DoxX family protein	NA	NA	NA	NA
AWI93100.1\|1084956_1085916_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AWI93101.1\|1085961_1086093_-	hypothetical protein	NA	NA	NA	NA
AWI93102.1\|1086156_1086447_-	NINE protein	A0A060AN66	Enterococcus_phage	7.5e-07	38.0
AWI93103.1\|1086536_1087088_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AWI93104.1\|1087139_1088078_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
AWI93105.1\|1088228_1088333_+	hypothetical protein	NA	NA	NA	NA
AWI93106.1\|1088409_1089621_+	isochorismate synthase	NA	NA	NA	NA
AWI93107.1\|1089607_1091281_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase	NA	NA	NA	NA
AWI93108.1\|1091267_1092071_+	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA
AWI93109.1\|1092063_1092885_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
AWI93110.1\|1093123_1093453_-	staphostatin B	NA	NA	NA	NA
AWI93111.1\|1093490_1094672_-\|protease	cysteine protease staphopain B	NA	NA	NA	NA
AWI93112.1\|1094753_1095764_-\|protease	serine protease	A0A2H4PQP7	Staphylococcus_phage	6.2e-16	32.3

DBSCAN-SWA_6

1114658 : 1123131

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI93129.1\|1114658_1115141_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	6.2e-22	44.7
AWI93130.1\|1115127_1116252_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
AWI93131.1\|1116255_1116960_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4R1E8	Synechococcus_phage	7.3e-48	42.1
AWI93132.1\|1116959_1117223_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
AWI93133.1\|1117224_1117896_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
AWI93134.1\|1117888_1120078_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.0e-140	39.7
AWI93135.1\|1120056_1121541_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.2e-45	31.7
AWI93136.1\|1121533_1122562_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.3e-61	41.4
AWI93137.1\|1122564_1123131_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.1e-29	40.1

DBSCAN-SWA_7

1593685 : 1644962

Staphylococcus_phage(91.55%)

integrase,portal,tail,terminase,head,holin,capsid

attL 1590544:1590559|attR 1641321:1641336

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1590544:1590559	attL	NA	NA	NA	NA
AWI93561.1\|1593685_1593901_-	hypothetical protein	A0ZS61	Staphylococcus_virus	2.0e-25	100.0
AWI93562.1\|1593964_1594264_-	hypothetical protein	A7TWL2	Staphylococcus_phage	1.7e-46	94.7
AWI93563.1\|1594622_1596077_-	CHAP domain-containing protein	U5U7D2	Staphylococcus_phage	4.8e-288	99.4
AWI93564.1\|1596087_1596390_-\|holin	phage holin	A0A2I6PF56	Staphylococcus_phage	3.1e-48	100.0
AWI93565.1\|1596525_1596825_-	DUF2951 domain-containing protein	M9QRV2	Staphylococcus_phage	5.9e-31	98.0
AWI93566.1\|1596870_1597035_-	XkdX family protein	Q4ZCZ6	Staphylococcus_virus	4.9e-24	100.0
AWI93567.1\|1597027_1597417_-	DUF2977 domain-containing protein	M9QYR4	Staphylococcus_phage	9.9e-63	99.2
AWI93568.1\|1597416_1598883_-	DUF2479 domain-containing protein	A0A2I6PDE3	Staphylococcus_phage	1.3e-272	99.4
AWI93569.1\|1598882_1600793_-	hypothetical protein	A0A2I6PEQ9	Staphylococcus_phage	0.0e+00	100.0
AWI93570.1\|1600808_1601099_-	hypothetical protein	U5U457	Staphylococcus_phage	2.1e-49	100.0
AWI93571.1\|1601098_1602682_-	peptidase	A0A2I6PEQ5	Staphylococcus_phage	9.3e-309	100.0
AWI93572.1\|1602690_1603515_-\|tail	phage tail family protein	A0A2I6PER3	Staphylococcus_phage	1.2e-158	99.6
AWI93573.1\|1603514_1609715_-\|tail	phage tail tape measure protein	M1TB03	Staphylococcus_phage	0.0e+00	99.9
AWI93574.1\|1609728_1609887_-	hypothetical protein	A0A2I6PES8	Staphylococcus_phage	1.2e-19	100.0
AWI93575.1\|1609937_1610279_-	hypothetical protein	A0A2I6PEQ2	Staphylococcus_phage	1.5e-54	100.0
AWI93576.1\|1610336_1610792_-\|tail	phage tail protein	A0A2I6PF45	Staphylococcus_phage	1.3e-77	100.0
AWI93577.1\|1610883_1611525_-\|tail	phage tail protein	A0A2I6PEP6	Staphylococcus_phage	5.9e-121	100.0
AWI93578.1\|1611559_1611955_-	DUF3168 domain-containing protein	A0A0K1LKC0	Staphylococcus_phage	6.7e-67	99.2
AWI93579.1\|1611955_1612357_-	hypothetical protein	A0A2I6PDD3	Staphylococcus_phage	2.3e-67	99.2
AWI93580.1\|1612353_1612686_-	hypothetical protein	A0A2I6PDD6	Staphylococcus_phage	8.2e-58	99.1
AWI93581.1\|1612697_1612976_-\|head,tail	phage gp6-like head-tail connector protein	A0A2I6PEQ1	Staphylococcus_phage	2.1e-46	100.0
AWI93582.1\|1613044_1614208_-\|capsid	phage major capsid protein	A0A0K1LKB5	Staphylococcus_phage	2.7e-217	100.0
AWI93583.1\|1614219_1614993_-	lipase chaperone	A0A2I6PEQ7	Staphylococcus_phage	5.1e-135	98.4
AWI93584.1\|1614976_1616215_-\|portal	phage portal protein	A0A2I6PF26	Staphylococcus_phage	2.7e-231	98.1
AWI93585.1\|1616219_1617911_-\|terminase	terminase large subunit	M9QX14	Staphylococcus_phage	0.0e+00	99.5
AWI93586.1\|1617900_1618206_-\|terminase	phage terminase small subunit P27 family	A0A2I6PE27	Staphylococcus_phage	2.9e-49	100.0
AWI93587.1\|1618335_1618650_-	HNH endonuclease	A0A2I6PDC4	Staphylococcus_phage	2.5e-56	100.0
AWI93588.1\|1618806_1619244_-	transcriptional regulator	A0A2I6PDC2	Staphylococcus_phage	4.6e-77	100.0
AWI93589.1\|1619256_1620624_-	ATP-dependent helicase	A0A2I6PE95	Staphylococcus_phage	1.7e-263	100.0
AWI94931.1\|1620604_1620895_-	VRR-NUC domain-containing protein	A0A2I6PEN7	Staphylococcus_phage	6.5e-51	100.0
AWI93590.1\|1621028_1621133_+	hypothetical protein	A0A2I6PDP6	Staphylococcus_phage	2.3e-11	97.1
AWI93591.1\|1621089_1621290_+	hypothetical protein	Q4ZCN1	Staphylococcus_virus	1.9e-30	98.5
AWI94932.1\|1621235_1622291_-	hypothetical protein	A0A2I6PEP4	Staphylococcus_phage	8.0e-208	99.7
AWI93592.1\|1623734_1623935_-	DUF1514 domain-containing protein	A0A2I6PF41	Staphylococcus_phage	2.9e-26	100.0
AWI93593.1\|1624002_1624170_-	transcriptional regulator	A0A2I6PF16	Staphylococcus_phage	2.1e-22	98.2
AWI93594.1\|1624157_1624358_-	hypothetical protein	A0A2I6PF22	Staphylococcus_phage	1.8e-28	100.0
AWI93595.1\|1624332_1624521_-	DUF1381 domain-containing protein	A0A2I6PF34	Staphylococcus_phage	2.3e-25	100.0
AWI93596.1\|1624537_1624711_-	hypothetical protein	S4SVD5	Staphylococcus_phage	3.6e-25	100.0
AWI93597.1\|1624747_1625275_-	dUTP pyrophosphatase	A0A2I6PF13	Staphylococcus_phage	1.0e-94	100.0
AWI93598.1\|1625507_1625816_-	hypothetical protein	R4IFL1	Staphylococcus_phage	4.8e-52	100.0
AWI93599.1\|1625812_1626160_-	hypothetical protein	D2JGL4	Staphylococcus_phage	5.9e-59	100.0
AWI93600.1\|1626156_1626558_-	hypothetical protein	A0A0E3T8H9	Staphylococcus_phage	6.0e-63	91.0
AWI93601.1\|1626560_1626767_-	hypothetical protein	A0A2K9VBT9	Staphylococcus_phage	3.0e-34	100.0
AWI93602.1\|1626781_1627030_-	hypothetical protein	A0A2I6PF06	Staphylococcus_phage	3.6e-42	100.0
AWI93603.1\|1627038_1627239_-	hypothetical protein	A0A2I6PF32	Staphylococcus_phage	1.3e-29	100.0
AWI93604.1\|1627241_1627499_-	DUF3310 domain-containing protein	A0A2I6PF10	Staphylococcus_phage	5.7e-43	100.0
AWI93605.1\|1627498_1627900_-	PVL family protein	A0A2I6PF14	Staphylococcus_phage	1.2e-68	100.0
AWI93606.1\|1627899_1628085_-	DUF3113 domain-containing protein	A0A2I6PEM8	Staphylococcus_phage	7.0e-27	100.0
AWI94933.1\|1628097_1630050_-	DNA polymerase	A0A2I6PF18	Staphylococcus_phage	0.0e+00	99.5
AWI93607.1\|1630118_1630676_-	DUF2815 domain-containing protein	A0A2I6PF05	Staphylococcus_phage	1.8e-97	100.0
AWI93608.1\|1630701_1631868_-	DUF2800 domain-containing protein	A0A2D1G5B8	Staphylococcus_phage	2.2e-219	98.7
AWI93609.1\|1631864_1632227_-	hypothetical protein	Q4ZCP8	Staphylococcus_virus	1.9e-55	99.2
AWI93610.1\|1632241_1632565_-	TrmB family transcriptional regulator	A0A2I6PDL5	Staphylococcus_phage	1.7e-52	99.1
AWI93611.1\|1632643_1632805_-	DUF1270 domain-containing protein	A7TWM3	Staphylococcus_phage	8.6e-21	100.0
AWI93612.1\|1632817_1633081_-	helix-turn-helix domain-containing protein	A7TWG0	Staphylococcus_phage	5.7e-46	100.0
AWI93613.1\|1633105_1633321_-	hypothetical protein	A0A2I6PF01	Staphylococcus_phage	1.9e-31	100.0
AWI93614.1\|1633375_1633741_+	hypothetical protein	A0A2I6PF07	Staphylococcus_phage	2.4e-63	100.0
AWI93615.1\|1633709_1633955_-	DUF2829 domain-containing protein	A0A2I6PF15	Staphylococcus_phage	5.1e-41	100.0
AWI93616.1\|1634010_1634220_+	hypothetical protein	W5R9J5	Staphylococcus_phage	1.2e-30	100.0
AWI93617.1\|1634209_1634353_-	hypothetical protein	W5R8I6	Staphylococcus_phage	2.5e-16	100.0
AWI93618.1\|1634381_1635158_-	transcriptional regulator	A0A2I6PD87	Staphylococcus_phage	1.1e-140	100.0
AWI93619.1\|1635171_1635408_-	XRE family transcriptional regulator	A0A2I6PD81	Staphylococcus_phage	1.5e-37	100.0
AWI93620.1\|1635559_1635874_+	XRE family transcriptional regulator	A0A0N9BAW4	Staphylococcus_phage	9.8e-53	100.0
AWI93621.1\|1635886_1636348_+	toxin	A0A2K9VBR7	Staphylococcus_phage	1.2e-83	100.0
AWI93622.1\|1636365_1636950_+	hypothetical protein	A0A2I6PD77	Staphylococcus_phage	1.4e-68	100.0
AWI93623.1\|1637179_1637326_+	hypothetical protein	A0A2I6PEK8	Staphylococcus_phage	1.1e-14	89.6
AWI93624.1\|1637322_1637937_-	ATPase	A7TW88	Staphylococcus_phage	7.9e-107	100.0
AWI93625.1\|1638062_1639268_+\|integrase	site-specific integrase	A0A2I6PEN0	Staphylococcus_phage	1.7e-222	99.8
AWI93626.1\|1639310_1641338_-	hypothetical protein	B5WZK7	Staphylococcus_phage	5.8e-114	97.2
1641321:1641336	attR	NA	NA	NA	NA
AWI93627.1\|1641330_1642260_-	DUF1672 domain-containing protein	NA	NA	NA	NA
AWI93628.1\|1642504_1644256_-	two-component sensor histidine kinase	A0A1V0SGX0	Hokovirus	1.7e-21	33.6
AWI93629.1\|1644236_1644962_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	3.5e-45	43.0

DBSCAN-SWA_8

1700086 : 1708398

Staphylococcus_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI93693.1\|1700086_1700872_-	metal ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	8.0e-19	28.3
AWI93694.1\|1700997_1701888_-	endonuclease	A0A2H4UU70	Bodo_saltans_virus	2.0e-26	33.1
AWI93695.1\|1701897_1703244_-	DEAD/DEAH box family ATP-dependent RNA helicase	A0A1V0SIR5	Klosneuvirus	5.3e-55	33.7
AWI93696.1\|1703357_1704458_-	Nif3-like dinuclear metal center hexameric protein	A0A1S5V250	Saudi_moumouvirus	5.2e-08	29.6
AWI93697.1\|1704460_1705138_-\|tRNA	tRNA (adenine-N(1))-methyltransferase	NA	NA	NA	NA
AWI93698.1\|1705268_1706375_-	RNA polymerase sigma factor SigA	A0A2I7SAT0	Vibrio_phage	1.1e-37	38.1
AWI93699.1\|1706598_1708398_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	4.6e-54	36.0

DBSCAN-SWA_9

1777536 : 1786579

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI93769.1\|1777536_1778055_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	5.6e-29	46.5
AWI93770.1\|1778076_1780350_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.2e-62	28.8
AWI93771.1\|1780552_1782832_-	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.8e-31	35.8
AWI93772.1\|1783106_1783367_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	8.2e-05	35.3
AWI93773.1\|1783385_1784525_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	3.5e-84	44.4
AWI93774.1\|1784547_1785573_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
AWI93775.1\|1785574_1786579_-	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	1.7e-05	29.1

DBSCAN-SWA_10

1912078 : 2033166

118

Staphylococcus_phage(91.04%)

tRNA,bacteriocin,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI93889.1\|1912078_1918639_-	DUF1542 domain-containing protein	A0A2H4PQU6	Staphylococcus_phage	2.0e-304	98.1
AWI93890.1\|1918964_1919276_-	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	1.6e-52	100.0
AWI93891.1\|1919297_1921715_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	99.2
AWI93892.1\|1922002_1923184_-	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	5.6e-218	100.0
AWI93893.1\|1923293_1924247_+	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	2.2e-79	100.0
AWI93894.1\|1924243_1924807_+	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	8.3e-103	99.5
AWI93895.1\|1924926_1925328_-	MarR family transcriptional regulator	NA	NA	NA	NA
AWI93896.1\|1925744_1926917_+\|transposase	IS256 family transposase IS256	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
AWI93897.1\|1928238_1929066_-	alpha/beta hydrolase	NA	NA	NA	NA
AWI93898.1\|1929068_1929188_-	hypothetical protein	NA	NA	NA	NA
AWI93899.1\|1929199_1929391_-	hypothetical protein	NA	NA	NA	NA
AWI93900.1\|1929299_1930301_+	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	9.0e-185	99.7
AWI93901.1\|1930422_1930887_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	5.8e-70	99.4
AWI93902.1\|1930899_1932081_-	riboflavin biosynthesis protein RibBA	A0A2H4PQS2	Staphylococcus_phage	6.6e-227	99.7
AWI93903.1\|1932091_1932724_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.7e-112	99.5
AWI94942.1\|1932730_1933762_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	2.4e-196	99.1
AWI93904.1\|1934254_1935757_-	pyridine nucleotide-disulfide oxidoreductase	A0A2H4PQX2	Staphylococcus_phage	2.3e-30	100.0
AWI93905.1\|1936279_1936594_+	ArsR family transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	2.0e-53	100.0
AWI93906.1\|1936593_1937886_+	arsenical efflux pump membrane protein ArsB	A0A2H4PQU3	Staphylococcus_phage	5.0e-228	99.5
AWI93907.1\|1937903_1938299_+	protein ArsC	A0A2H4PQT9	Staphylococcus_phage	6.3e-73	100.0
AWI93908.1\|1938593_1939448_-	autolysin	Q4ZCC7	Staphylococcus_virus	9.8e-39	38.6
AWI93909.1\|1939723_1939948_-	hypothetical protein	NA	NA	NA	NA
AWI93910.1\|1940146_1940617_+	RNA polymerase sigma factor SigS	A0A2H4PQT5	Staphylococcus_phage	1.0e-82	99.4
AWI93911.1\|1940729_1941173_+	competence protein ComK	NA	NA	NA	NA
AWI93912.1\|1941159_1941603_-	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	3.0e-55	85.0
AWI93913.1\|1941898_1942534_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AWI93914.1\|1942973_1943687_-	transaldolase	M1PR54	Cyanophage	5.5e-19	35.3
AWI93915.1\|1943946_1944249_+	hypothetical protein	NA	NA	NA	NA
AWI93916.1\|1944504_1944870_+	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	3.6e-59	100.0
AWI93917.1\|1944866_1945220_+	camphor resistance protein CrcB	A0A2H4PQQ7	Staphylococcus_phage	1.0e-21	99.1
AWI93918.1\|1947302_1948136_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	9.6e-156	98.6
AWI93919.1\|1948347_1949256_-	NERD domain-containing protein	A0A2H4PQQ8	Staphylococcus_phage	3.2e-136	98.7
AWI93920.1\|1949380_1950574_-	S-adenosylmethionine synthase	A0A2H4PQS6	Staphylococcus_phage	1.9e-218	99.7
AWI93921.1\|1950944_1952537_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	0.0e+00	100.0
AWI93922.1\|1952672_1953158_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	4.9e-19	35.4
AWI94943.1\|1953532_1954279_-	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	7.1e-142	98.4
AWI93923.1\|1954283_1954757_-	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	4.7e-83	98.1
AWI93924.1\|1954822_1955080_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	7.2e-46	100.0
AWI93925.1\|1955076_1956078_-	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	4.8e-186	97.6
AWI93926.1\|1956082_1957561_-	2-succinylbenzoate-CoA ligase	A0A2H4PQM9	Staphylococcus_phage	2.0e-281	97.0
AWI94944.1\|1957719_1958175_-	DUF4909 domain-containing protein	A0A2H4PQN7	Staphylococcus_phage	3.0e-79	98.6
AWI93927.1\|1958477_1959128_+	calcium-binding protein	A0A2H4PQM8	Staphylococcus_phage	2.7e-44	88.4
AWI93928.1\|1959208_1960204_+	DUF4352 domain-containing protein	A0A2H4PQN2	Staphylococcus_phage	7.1e-73	96.4
AWI93929.1\|1960278_1960905_+	hypothetical protein	A0A2H4PQM7	Staphylococcus_phage	7.1e-79	82.7
AWI93930.1\|1960945_1961290_+	DUF3969 domain-containing protein	A0A2H4PQN6	Staphylococcus_phage	6.3e-53	92.0
AWI93931.1\|1961387_1961939_+	hypothetical protein	A0A2H4PQN4	Staphylococcus_phage	1.0e-20	94.1
AWI93932.1\|1962156_1962798_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4PQN8	Staphylococcus_phage	2.6e-76	93.2
AWI93933.1\|1962911_1963097_-	hypothetical protein	NA	NA	NA	NA
AWI93934.1\|1963098_1963275_-	hypothetical protein	NA	NA	NA	NA
AWI93935.1\|1963285_1963669_-	hypothetical protein	NA	NA	NA	NA
AWI93936.1\|1963860_1964070_-\|transposase	transposase	A0A2H4PQV6	Staphylococcus_phage	1.4e-31	100.0
AWI93937.1\|1964272_1964416_-	hypothetical protein	A0A2H4PQU1	Staphylococcus_phage	6.4e-20	100.0
AWI93938.1\|1964618_1964714_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
AWI93939.1\|1964836_1964938_+	hypothetical protein	NA	NA	NA	NA
AWI94945.1\|1965285_1965645_-	DUF1433 domain-containing protein	NA	NA	NA	NA
AWI93940.1\|1970034_1971207_+\|transposase	IS256 family transposase IS256	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
AWI93941.1\|1971255_1971627_-	hypothetical protein	NA	NA	NA	NA
AWI93942.1\|1972476_1973676_-	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	5.5e-229	99.7
AWI93943.1\|1973668_1975408_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	4.4e-288	99.4
AWI93944.1\|1975388_1975523_-	hypothetical protein	NA	NA	NA	NA
AWI93945.1\|1975587_1976307_-\|protease	serine protease SplF	A0A2H4PQP1	Staphylococcus_phage	1.1e-131	100.0
AWI93946.1\|1976457_1977174_-\|protease	serine protease SplE	A0A2H4PQN5	Staphylococcus_phage	1.1e-131	100.0
AWI93947.1\|1977275_1977383_+	hypothetical protein	NA	NA	NA	NA
AWI93948.1\|1977331_1978051_-\|protease	serine protease SplD	A0A2H4PQP9	Staphylococcus_phage	4.6e-130	99.6
AWI93949.1\|1978171_1978891_-\|protease	serine protease SplC	A0A2H4PQP7	Staphylococcus_phage	1.2e-130	99.2
AWI93950.1\|1978948_1979671_-\|protease	serine protease SplB	A0A2H4PQN0	Staphylococcus_phage	2.4e-131	99.6
AWI93951.1\|1979795_1980503_-\|protease	serine protease SplA	A0A2H4PQN3	Staphylococcus_phage	2.6e-130	100.0
AWI93952.1\|1980938_1981157_-	hypothetical protein	NA	NA	NA	NA
AWI93953.1\|1981467_1982034_+	DUF4888 domain-containing protein	A0A2H4PQH6	Staphylococcus_phage	3.3e-99	100.0
AWI93954.1\|1982507_1983206_-	BsaG protein	A0A2H4PQH0	Staphylococcus_phage	3.8e-113	94.4
AWI93955.1\|1983202_1983964_-	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	A0A2H4PQH2	Staphylococcus_phage	4.4e-131	100.0
AWI93956.1\|1983960_1984653_-	lantibiotic ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.2e-124	100.0
AWI93957.1\|1984675_1986049_-	peptidase S8	A0A2H4PQH1	Staphylococcus_phage	2.9e-258	100.0
AWI93958.1\|1986058_1986577_-	enterotoxin	A0A2H4PQG9	Staphylococcus_phage	2.0e-95	100.0
AWI93959.1\|1986592_1987837_-	lanthionine synthetase	A0A2H4PQH9	Staphylococcus_phage	5.1e-238	100.0
AWI93960.1\|1987829_1990823_-\|bacteriocin	bacteriocin biosynthesis protein	A0A2H4PQG8	Staphylococcus_phage	0.0e+00	97.3
AWI93961.1\|1990887_1991031_-	gallidermin/nisin family lantibiotic	A0A2H4PQH4	Staphylococcus_phage	5.3e-14	80.9
AWI93962.1\|1991474_1991666_+	hypothetical protein	NA	NA	NA	NA
AWI93963.1\|1991767_1991911_-	gallidermin/nisin family lantibiotic	NA	NA	NA	NA
AWI93964.1\|1992152_1993136_-	bi-component leukocidin LukED subunit D	A0A2H4PQH7	Staphylococcus_phage	2.3e-185	99.1
AWI93965.1\|1993137_1994073_-	beta-channel forming cytolysin	A0A2H4PQI5	Staphylococcus_phage	1.4e-174	100.0
AWI93966.1\|1994872_1995412_+	hypothetical protein	Q4ZCB9	Staphylococcus_virus	2.0e-61	76.8
AWI93967.1\|1995424_1996213_+	DUF1828 domain-containing protein	A0A2H4PQI0	Staphylococcus_phage	5.3e-140	95.8
AWI93968.1\|1998669_1999224_-	serine hydrolase family protein	NA	NA	NA	NA
AWI93969.1\|1999317_1999545_+	hypothetical protein	NA	NA	NA	NA
AWI93970.1\|1999546_2000947_-	protoporphyrinogen oxidase	NA	NA	NA	NA
AWI93971.1\|2000970_2001894_-	ferrochelatase	NA	NA	NA	NA
AWI93972.1\|2001951_2002989_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA
AWI93973.1\|2002978_2003089_-	hypothetical protein	NA	NA	NA	NA
AWI93974.1\|2003251_2003755_+	signal transduction protein TRAP	NA	NA	NA	NA
AWI93975.1\|2003878_2005102_-	multidrug ABC transporter ATP-binding protein	NA	NA	NA	NA
AWI93976.1\|2005094_2005835_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-24	29.8
AWI93977.1\|2005968_2006391_+	HIT family protein	NA	NA	NA	NA
AWI93978.1\|2006532_2006898_+	YtxH domain-containing protein	NA	NA	NA	NA
AWI93979.1\|2007630_2008188_+	DUF3267 domain-containing protein	NA	NA	NA	NA
AWI93980.1\|2008392_2009355_+	foldase	NA	NA	NA	NA
AWI93981.1\|2009475_2010417_-	3'-5' exoribonuclease YhaM	NA	NA	NA	NA
AWI93982.1\|2010413_2013350_-	DNA repair protein Rad50	NA	NA	NA	NA
AWI93983.1\|2013339_2014536_-	exonuclease SbcCD subunit D	NA	NA	NA	NA
AWI93984.1\|2014826_2014925_-	hypothetical protein	NA	NA	NA	NA
AWI93985.1\|2015307_2015652_-	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	7.5e-06	29.7
AWI93986.1\|2015720_2016845_-	DUF445 domain-containing protein	NA	NA	NA	NA
AWI93987.1\|2017023_2017488_-	transcriptional regulator	NA	NA	NA	NA
AWI93988.1\|2017843_2018467_-	DNA-binding response regulator	NA	NA	NA	NA
AWI93989.1\|2018488_2019601_-	histidine kinase	NA	NA	NA	NA
AWI93990.1\|2019763_2020585_+	RluA family pseudouridine synthase	NA	NA	NA	NA
AWI93991.1\|2021047_2022433_-	class II fumarate hydratase	NA	NA	NA	NA
AWI93992.1\|2022628_2023024_-	hypothetical protein	NA	NA	NA	NA
AWI93993.1\|2023142_2023505_+	hypothetical protein	NA	NA	NA	NA
AWI93994.1\|2023781_2024954_+\|transposase	IS256 family transposase IS256	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
AWI93995.1\|2025132_2025285_-	hypothetical protein	NA	NA	NA	NA
AWI93996.1\|2025309_2025909_-	glucosamine-6-phosphate isomerase	NA	NA	NA	NA
AWI93997.1\|2026067_2026538_-\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
AWI93998.1\|2026542_2027685_-	epoxyqueuosine reductase	NA	NA	NA	NA
AWI93999.1\|2027820_2028549_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-36	42.7
AWI94000.1\|2028535_2029993_-	ABC transporter permease	NA	NA	NA	NA
AWI94001.1\|2030250_2031312_-	PTS transporter subunit IIC	NA	NA	NA	NA
AWI94002.1\|2031804_2033166_+\|transposase	ISL3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_11

2093198 : 2170791

114

Staphylococcus_phage(90.59%)

integrase,portal,tail,protease,terminase,head,holin,capsid

attL 2129964:2129981|attR 2178685:2178702

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWI94057.1\|2093198_2094365_+\|protease	cysteine protease staphopain A	NA	NA	NA	NA
AWI94058.1\|2094395_2094722_+	staphostatin A	NA	NA	NA	NA
AWI94059.1\|2095013_2095187_-	NETI motif-containing protein	NA	NA	NA	NA
AWI94060.1\|2095167_2095770_-	DUF2179 domain-containing protein	NA	NA	NA	NA
AWI94061.1\|2096040_2096862_-	NAD(+) synthetase	G3MA24	Bacillus_virus	1.8e-69	52.7
AWI94062.1\|2096854_2098324_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	4.5e-108	45.1
AWI94063.1\|2098507_2099584_+	nitric oxide synthase oxygenase	NA	NA	NA	NA
AWI94064.1\|2099603_2100398_+	ACT domain-containing protein	NA	NA	NA	NA
AWI94065.1\|2100469_2100577_+	hypothetical protein	NA	NA	NA	NA
AWI94066.1\|2100587_2102150_-	sodium-dependent dicarboxylate transporter SdcS	NA	NA	NA	NA
AWI94067.1\|2102354_2103452_-	pectate lyase	U5PWM6	Bacillus_phage	1.9e-47	34.6
AWI94068.1\|2103823_2104384_+	cysteine hydrolase	G3MA16	Bacillus_virus	2.0e-32	41.2
AWI94069.1\|2104436_2105366_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA
AWI94070.1\|2105560_2105734_-	hypothetical protein	NA	NA	NA	NA
AWI94071.1\|2105785_2107165_+	aldehyde dehydrogenase	NA	NA	NA	NA
AWI94072.1\|2107284_2108313_-	hypothetical protein	NA	NA	NA	NA
AWI94073.1\|2108582_2108984_+	YolD-like family protein	U3PG23	Staphylococcus_phage	6.0e-23	42.9
AWI94074.1\|2109556_2109730_-	hypothetical protein	NA	NA	NA	NA
AWI94075.1\|2110180_2111221_+	linear amide C-N hydrolase	NA	NA	NA	NA
AWI94076.1\|2111277_2112120_-	hypothetical protein	NA	NA	NA	NA
AWI94077.1\|2112116_2112674_-	DUF1700 domain-containing protein	NA	NA	NA	NA
AWI94078.1\|2112733_2113258_-	hypothetical protein	NA	NA	NA	NA
AWI94079.1\|2113378_2113942_+	thioredoxin family protein	NA	NA	NA	NA
AWI94080.1\|2114007_2114748_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA
AWI94081.1\|2114747_2115620_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	A0A2H4PQG7	Staphylococcus_phage	6.1e-28	35.2
AWI94082.1\|2115616_2116297_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA
AWI94083.1\|2116297_2117194_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	A0A2H4PQG7	Staphylococcus_phage	1.1e-16	30.2
AWI94084.1\|2117190_2117571_-	GntR family transcriptional regulator	NA	NA	NA	NA
AWI94085.1\|2117834_2118011_-	hypothetical protein	NA	NA	NA	NA
AWI94086.1\|2118253_2118352_-	hypothetical protein	NA	NA	NA	NA
AWI94087.1\|2118551_2119838_+	hypothetical protein	NA	NA	NA	NA
AWI94088.1\|2120161_2120452_-	MAP domain-containing protein	NA	NA	NA	NA
AWI94089.1\|2120462_2122217_-	MAP domain-containing protein	NA	NA	NA	NA
AWI94090.1\|2122602_2122803_+	hypothetical protein	A0A1P8L6A7	Staphylococcus_phage	3.4e-27	100.0
AWI94091.1\|2123174_2123354_+	hypothetical protein	A0A1W6JQ29	Staphylococcus_phage	1.4e-24	98.3
AWI94092.1\|2123377_2123686_+	hypothetical protein	M9NTD8	Staphylococcus_phage	3.2e-40	100.0
AWI94093.1\|2123664_2123925_+	hypothetical protein	M9NS66	Staphylococcus_phage	2.3e-23	100.0
AWI94094.1\|2123977_2124328_-	inhibitor	A0A1P8L6B0	Staphylococcus_phage	7.5e-54	100.0
AWI94095.1\|2124837_2125134_-	peptidoglycan hydrolase	A0A1P8L6B4	Staphylococcus_phage	1.6e-49	95.9
AWI94096.1\|2125040_2125295_-	amidase	Q4ZCK0	Staphylococcus_virus	8.0e-13	93.0
AWI94097.1\|2125221_2125377_+	amidase	NA	NA	NA	NA
AWI94098.1\|2125823_2126315_-	staphylokinase	A0A1W6JQ12	Staphylococcus_phage	4.7e-86	99.4
AWI94099.1\|2126505_2127261_-	CHAP domain-containing protein	D2JLG5	Staphylococcus_phage	3.4e-152	100.0
AWI94100.1\|2127272_2127527_-\|holin	phage holin	D2JLG4	Staphylococcus_phage	1.5e-40	98.8
AWI94101.1\|2127578_2127686_+	hypothetical protein	NA	NA	NA	NA
AWI94949.1\|2127738_2127915_-\|holin	putative holin-like toxin	D2JLG3	Staphylococcus_phage	2.2e-22	98.3
AWI94102.1\|2128023_2128797_-	enterotoxin	A0A1X9H080	Staphylococcus_phage	1.1e-145	100.0
AWI94103.1\|2129169_2129544_-	hypothetical protein	G4KNR3	Staphylococcus_phage	3.3e-39	100.0
AWI94104.1\|2129599_2129887_-	hypothetical protein	A0A1X9H0N7	Staphylococcus_phage	7.6e-44	100.0
AWI94105.1\|2129932_2130085_-	hypothetical protein	A0A1W6JPL6	Staphylococcus_phage	7.6e-19	100.0
2129964:2129981	attL	NA	NA	NA	NA
AWI94106.1\|2130077_2133860_-	hypothetical protein	A0A1X9H096	Staphylococcus_phage	0.0e+00	99.3
AWI94107.1\|2133875_2135366_-\|tail	phage tail protein	R9QST9	Staphylococcus_phage	5.9e-297	99.8
AWI94108.1\|2135365_2140015_-\|tail	phage tail tape measure protein	A0A1V0E5H1	Staphylococcus_phage	0.0e+00	94.2
AWI94109.1\|2140070_2140193_-	hypothetical protein	D2JLF6	Staphylococcus_phage	2.6e-14	97.5
AWI94110.1\|2140252_2140699_-	hypothetical protein	O80053	Staphylococcus_phage	1.3e-69	92.6
AWI94111.1\|2140765_2141719_-\|tail	phage tail protein	A7TWD0	Staphylococcus_phage	4.0e-166	95.0
AWI94112.1\|2141719_2142100_-	hypothetical protein	Q9MBP5	Staphylococcus_prophage	2.9e-59	85.7
AWI94113.1\|2142096_2142474_-	hypothetical protein	D2JLF2	Staphylococcus_phage	3.4e-60	98.4
AWI94114.1\|2142473_2142809_-\|head,tail	head-tail adaptor protein	A7TWC7	Staphylococcus_phage	1.1e-59	100.0
AWI94115.1\|2142795_2143128_-\|head,tail	phage head-tail adapter protein	D2JLF0	Staphylococcus_phage	2.1e-58	100.0
AWI94116.1\|2143136_2143295_-	hypothetical protein	D2JLE9	Staphylococcus_phage	3.2e-20	100.0
AWI94117.1\|2143330_2144578_-\|capsid	phage major capsid protein	A7TWC4	Staphylococcus_phage	5.0e-209	100.0
AWI94118.1\|2144665_2145250_-\|head,protease	HK97 family phage prohead protease	D2JLE7	Staphylococcus_phage	9.8e-107	100.0
AWI94950.1\|2145242_2146433_-\|portal	phage portal protein	D2JLE6	Staphylococcus_phage	1.8e-224	100.0
AWI94119.1\|2146498_2146738_-	hypothetical protein	A7TWC1	Staphylococcus_phage	1.2e-34	98.7
AWI94120.1\|2146712_2148407_-\|terminase	phage terminase large subunit	D2JLE4	Staphylococcus_phage	0.0e+00	100.0
AWI94121.1\|2148409_2148877_-\|terminase	phage terminase small subunit P27 family	D2JLE3	Staphylococcus_phage	1.1e-81	100.0
AWI94951.1\|2149005_2149350_-	HNH endonuclease	D2JLE2	Staphylococcus_phage	4.2e-65	100.0
AWI94122.1\|2149365_2149818_-	hypothetical protein	D2JLE1	Staphylococcus_phage	1.4e-79	100.0
AWI94123.1\|2149932_2150403_-	hypothetical protein	D2JLE0	Staphylococcus_phage	1.7e-69	99.3
AWI94952.1\|2150309_2150522_+	hypothetical protein	NA	NA	NA	NA
AWI94124.1\|2150425_2150626_-	DUF1514 domain-containing protein	A0A2I6PDV9	Staphylococcus_phage	4.0e-28	98.5
AWI94125.1\|2150625_2150775_-	transcriptional regulator	A0A1W6JPZ2	Staphylococcus_phage	4.8e-18	100.0
AWI94126.1\|2150774_2151161_-	hypothetical protein	Q4ZBK1	Staphylococcus_phage	1.5e-63	98.4
AWI94127.1\|2151150_2151426_-	hypothetical protein	A0A2I6PEM4	Staphylococcus_phage	1.7e-40	94.5
AWI94128.1\|2151379_2151583_-	hypothetical protein	A0A2I6PEQ8	Staphylococcus_phage	8.3e-29	97.0
AWI94129.1\|2151579_2151786_-	DUF1381 domain-containing protein	B7T0C2	Staphylococcus_virus	4.2e-20	98.5
AWI94130.1\|2151822_2152359_-	dUTPase	R4IG63	Staphylococcus_phage	2.7e-95	99.4
AWI94131.1\|2152351_2152600_-	DUF1024 domain-containing protein	A0A2K9VBU0	Staphylococcus_phage	1.2e-37	100.0
AWI94132.1\|2152592_2152877_-	hypothetical protein	E9LT36	Staphylococcus_phage	1.0e-45	98.9
AWI94133.1\|2152873_2153323_-	hypothetical protein	A0A2I6PDH2	Staphylococcus_phage	3.5e-80	99.3
AWI94134.1\|2153319_2153514_-	hypothetical protein	A0A0E3XCV8	Staphylococcus_phage	2.5e-27	100.0
AWI94135.1\|2153510_2153915_-	hypothetical protein	A0A0E3T8H9	Staphylococcus_phage	4.2e-72	100.0
AWI94136.1\|2153917_2154124_-	hypothetical protein	A0A2K9VBT9	Staphylococcus_phage	8.7e-34	98.5
AWI94137.1\|2154137_2154386_-	hypothetical protein	A0A2I6PDB4	Staphylococcus_phage	2.8e-39	93.9
AWI94138.1\|2154385_2154640_-	DUF3310 domain-containing protein	A0A2K9VBW1	Staphylococcus_phage	1.4e-41	97.6
AWI94139.1\|2154639_2155257_-	hypothetical protein	A0A059T7P3	Staphylococcus_phage	2.8e-83	99.0
AWI94140.1\|2155257_2155443_-	DUF3113 domain-containing protein	A0A1X9H053	Staphylococcus_phage	1.2e-26	96.7
AWI94141.1\|2155447_2155852_-	DUF1064 domain-containing protein	G4KNP2	Staphylococcus_phage	2.1e-68	99.3
AWI94142.1\|2155862_2156084_-	DUF3269 domain-containing protein	Q9G021	Staphylococcus_phage	3.2e-34	97.3
AWI94143.1\|2156096_2156255_-	hypothetical protein	A0A0H3U301	Staphylococcus_phage	4.5e-22	98.1
AWI94144.1\|2156251_2157037_-	DNA replication protein DnaC	A0A0H4J332	Staphylococcus_phage	1.9e-145	100.0
AWI94145.1\|2157049_2157781_-	helix-turn-helix domain-containing protein	A0A1J0MGB2	Staphylococcus_phage	1.2e-80	79.3
AWI94146.1\|2157845_2158127_+	hypothetical protein	A0A1W6JPU7	Staphylococcus_phage	2.6e-49	100.0
AWI94147.1\|2158265_2158937_-	hypothetical protein	A7TWM9	Staphylococcus_phage	4.9e-126	98.7
AWI94953.1\|2158949_2159450_-	single-strand DNA-binding protein	A7TWM8	Staphylococcus_phage	7.2e-90	100.0
AWI94148.1\|2159533_2160313_-	chromosomal replication initiator DnaA	Q9G028	Staphylococcus_virus	7.4e-142	99.6
AWI94149.1\|2160305_2160527_-	DUF2483 domain-containing protein	A0A2H4PQR5	Staphylococcus_phage	4.2e-34	100.0
AWI94150.1\|2160536_2160797_-	DUF1108 domain-containing protein	A0A2H4PQR7	Staphylococcus_phage	3.4e-43	100.0
AWI94151.1\|2160889_2161051_-	DUF1270 domain-containing protein	A0A2I6PDF7	Staphylococcus_phage	1.9e-20	100.0
AWI94152.1\|2161047_2161368_-	DUF771 domain-containing protein	A0A2I6PDH6	Staphylococcus_phage	1.5e-56	100.0
AWI94153.1\|2161426_2162059_+	hypothetical protein	A7TW95	Staphylococcus_phage	1.5e-113	100.0
AWI94154.1\|2162073_2162214_-	hypothetical protein	A0A2I6PDG0	Staphylococcus_phage	1.9e-16	100.0
AWI94155.1\|2162244_2162442_-	hypothetical protein	A0A1W6JPV3	Staphylococcus_phage	1.2e-24	100.0
AWI94156.1\|2163264_2163804_+	hypothetical protein	A7TW92	Staphylococcus_phage	1.7e-97	100.0
AWI94157.1\|2163827_2164088_-	transcriptional regulator	A7TW91	Staphylococcus_phage	2.7e-40	100.0
AWI94158.1\|2164105_2164330_-	DUF739 domain-containing protein	A7TW90	Staphylococcus_phage	4.5e-36	100.0
AWI94159.1\|2164488_2165259_+	helix-turn-helix domain-containing protein	A0A1P8L6G7	Staphylococcus_phage	6.2e-141	100.0
AWI94160.1\|2165458_2165641_+	hypothetical protein	A0A2I6PDR4	Staphylococcus_phage	5.3e-27	100.0
AWI94161.1\|2165676_2165823_+	hypothetical protein	A0A2I6PEK8	Staphylococcus_phage	1.1e-14	89.6
AWI94162.1\|2165819_2166434_-	ATPase	A7TW88	Staphylococcus_phage	7.9e-107	100.0
AWI94163.1\|2166541_2167579_+\|integrase	site-specific integrase	E9LT82	Staphylococcus_phage	1.0e-178	93.0
AWI94164.1\|2168697_2169714_-	bi-component leukocidin LukGH subunit G	A0A2I6PER8	Staphylococcus_phage	1.1e-25	29.0
AWI94165.1\|2169735_2170791_-	bi-component leukocidin LukGH subunit H	A0A1X9IGW5	Staphylococcus_phage	2.8e-35	34.3
2178685:2178702	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP029166

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection