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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP029168 Staphylococcus aureus strain PTDrAP2 plasmid pPTDrAP2a, complete sequence 0 crisprs NA 0 0 0 0
CP029170 Staphylococcus aureus strain PTDrAP2 plasmid pPTDrAP2c, complete sequence 0 crisprs NA 0 0 0 0
CP029171 Staphylococcus aureus strain PTDrAP2 plasmid pPTDrAP2d, complete sequence 0 crisprs NA 0 0 0 0
CP029172 Staphylococcus aureus strain PTDrAP2 chromosome, complete genome 10 crisprs csa3,WYL,cas3,DEDDh,DinG,TnsE_C 6 4 12 1
CP029169 Staphylococcus aureus strain PTDrAP2 plasmid pPTDrAP2b, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. CP029172
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029172_1 357568-357767 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029172_2 928338-928420 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029172_3 950470-950552 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029172_4 1002746-1002826 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029172_5 1985930-1986023 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029172_6 2234746-2234958 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029172_7 2290318-2290468 Orphan NA
2 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029172_8 2454192-2454277 Orphan NA
1 spacers
WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029172_9 2570609-2570703 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029172_10 2630333-2630427 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 1047678-1047708 0 1.0
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 1086509-1086539 0 1.0
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 2085012-2085042 0 1.0
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 2085122-2085152 0 1.0
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 2160038-2160068 0 1.0
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 1047678-1047708 0 1.0
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 1086509-1086539 0 1.0
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 2085012-2085042 0 1.0
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 2085122-2085152 0 1.0
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 2160038-2160068 0 1.0
CP029172_5 5.1|1985964|26|CP029172|CRISPRCasFinder 1985964-1985989 26 CP029172.1 2085059-2085084 0 1.0
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 339522-339552 1 0.968
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 339580-339610 1 0.968
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 339638-339668 1 0.968
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 339696-339726 1 0.968
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 481107-481137 1 0.968
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 755065-755095 1 0.968
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 882021-882051 1 0.968
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 998339-998369 1 0.968
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 1182088-1182118 1 0.968
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 1283718-1283748 1 0.968
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 1283772-1283802 1 0.968
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 1895331-1895361 1 0.968
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 1985891-1985921 1 0.968
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 2409185-2409215 1 0.968
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 339522-339552 1 0.968
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 339580-339610 1 0.968
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 339638-339668 1 0.968
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 339696-339726 1 0.968
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 481107-481137 1 0.968
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 755065-755095 1 0.968
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 882021-882051 1 0.968
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 998339-998369 1 0.968
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 1182088-1182118 1 0.968
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 1283718-1283748 1 0.968
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 1283772-1283802 1 0.968
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 1895331-1895361 1 0.968
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 1985891-1985921 1 0.968
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 2409185-2409215 1 0.968
CP029172_8 8.1|2454222|26|CP029172|CRISPRCasFinder 2454222-2454247 26 CP029172.1 998403-998428 1 0.962
CP029172_1 1.1|357599|25|CP029172|CRISPRCasFinder 357599-357623 25 CP029172.1 357768-357792 2 0.92
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 937347-937377 2 0.935
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 959476-959506 2 0.935
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 1002447-1002477 2 0.935
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 1498640-1498670 2 0.935
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 1546061-1546091 2 0.935
CP029172_2 2.1|928364|31|CP029172|CRISPRCasFinder 928364-928394 31 CP029172.1 2860206-2860236 2 0.935
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 937347-937377 2 0.935
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 959476-959506 2 0.935
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 1002447-1002477 2 0.935
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 1498640-1498670 2 0.935
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 1546061-1546091 2 0.935
CP029172_3 3.1|950496|31|CP029172|CRISPRCasFinder 950496-950526 31 CP029172.1 2860206-2860236 2 0.935
CP029172_4 4.1|1002771|31|CP029172|CRISPRCasFinder 1002771-1002801 31 CP029172.1 922761-922791 2 0.935
CP029172_4 4.1|1002771|31|CP029172|CRISPRCasFinder 1002771-1002801 31 CP029172.1 944893-944923 2 0.935
CP029172_8 8.1|2454222|26|CP029172|CRISPRCasFinder 2454222-2454247 26 CP029172.1 1002548-1002573 2 0.923
CP029172_8 8.1|2454222|26|CP029172|CRISPRCasFinder 2454222-2454247 26 CP029172.1 1047483-1047508 2 0.923
CP029172_8 8.1|2454222|26|CP029172|CRISPRCasFinder 2454222-2454247 26 CP029172.1 1494311-1494336 2 0.923
CP029172_8 8.1|2454222|26|CP029172|CRISPRCasFinder 2454222-2454247 26 CP029172.1 2245799-2245824 2 0.923
CP029172_8 8.1|2454222|26|CP029172|CRISPRCasFinder 2454222-2454247 26 CP029172.1 2586045-2586070 2 0.923

1. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 1047678-1047708, mismatch: 0, identity: 1.0

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggccc	Protospacer
*******************************

2. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 1086509-1086539, mismatch: 0, identity: 1.0

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggccc	Protospacer
*******************************

3. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 2085012-2085042, mismatch: 0, identity: 1.0

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggccc	Protospacer
*******************************

4. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 2085122-2085152, mismatch: 0, identity: 1.0

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggccc	Protospacer
*******************************

5. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 2160038-2160068, mismatch: 0, identity: 1.0

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggccc	Protospacer
*******************************

6. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 1047678-1047708, mismatch: 0, identity: 1.0

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggccc	Protospacer
*******************************

7. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 1086509-1086539, mismatch: 0, identity: 1.0

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggccc	Protospacer
*******************************

8. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 2085012-2085042, mismatch: 0, identity: 1.0

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggccc	Protospacer
*******************************

9. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 2085122-2085152, mismatch: 0, identity: 1.0

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggccc	Protospacer
*******************************

10. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 2160038-2160068, mismatch: 0, identity: 1.0

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggccc	Protospacer
*******************************

11. spacer 5.1|1985964|26|CP029172|CRISPRCasFinder matches to position: 2085059-2085084, mismatch: 0, identity: 1.0

agaatttcaaaaaagaaattctacag	CRISPR spacer
agaatttcaaaaaagaaattctacag	Protospacer
**************************

12. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 339522-339552, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

13. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 339580-339610, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

14. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 339638-339668, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

15. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 339696-339726, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

16. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 481107-481137, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctatgttggggccc	Protospacer
*******************.***********

17. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 755065-755095, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttgggcccc	Protospacer
*************************** ***

18. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 882021-882051, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

19. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 998339-998369, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctatgttggggccc	Protospacer
*******************.***********

20. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 1182088-1182118, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

21. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 1283718-1283748, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttctattcgaaattctctgtgttggggccc	Protospacer
***** *************************

22. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 1283772-1283802, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttctattcgaaattctctgtgttggggccc	Protospacer
***** *************************

23. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 1895331-1895361, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctatgttggggccc	Protospacer
*******************.***********

24. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 1985891-1985921, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttgtcgaaattctctgtgttggggccc	Protospacer
****** ************************

25. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 2409185-2409215, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

26. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 339522-339552, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

27. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 339580-339610, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

28. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 339638-339668, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

29. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 339696-339726, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

30. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 481107-481137, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctatgttggggccc	Protospacer
*******************.***********

31. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 755065-755095, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttgggcccc	Protospacer
*************************** ***

32. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 882021-882051, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

33. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 998339-998369, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctatgttggggccc	Protospacer
*******************.***********

34. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 1182088-1182118, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

35. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 1283718-1283748, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttctattcgaaattctctgtgttggggccc	Protospacer
***** *************************

36. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 1283772-1283802, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttctattcgaaattctctgtgttggggccc	Protospacer
***** *************************

37. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 1895331-1895361, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctatgttggggccc	Protospacer
*******************.***********

38. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 1985891-1985921, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttgtcgaaattctctgtgttggggccc	Protospacer
****** ************************

39. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 2409185-2409215, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

40. spacer 8.1|2454222|26|CP029172|CRISPRCasFinder matches to position: 998403-998428, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacatagaagctgacgg	Protospacer
**********************.***

41. spacer 1.1|357599|25|CP029172|CRISPRCasFinder matches to position: 357768-357792, mismatch: 2, identity: 0.92

ggcgaaaatacagcttacaataatg	CRISPR spacer
ggcgaaaagtcagcttacaataatg	Protospacer
********  ***************

42. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 937347-937377, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcatttcgaaattctctatgttggggccc	Protospacer
**** **************.***********

43. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 959476-959506, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcatttcgaaattctctatgttggggccc	Protospacer
**** **************.***********

44. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 1002447-1002477, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaatcctctgtgttggggacc	Protospacer
**************.************* **

45. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 1498640-1498670, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcggaattctctgtgttggagccc	Protospacer
**********.***************.****

46. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 1546061-1546091, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaaatctctgtgttgaggccc	Protospacer
************* ***********.*****

47. spacer 2.1|928364|31|CP029172|CRISPRCasFinder matches to position: 2860206-2860236, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtattgggggcc	Protospacer
*********************.****** **

48. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 937347-937377, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcatttcgaaattctctatgttggggccc	Protospacer
**** **************.***********

49. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 959476-959506, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcatttcgaaattctctatgttggggccc	Protospacer
**** **************.***********

50. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 1002447-1002477, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaatcctctgtgttggggacc	Protospacer
**************.************* **

51. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 1498640-1498670, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcggaattctctgtgttggagccc	Protospacer
**********.***************.****

52. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 1546061-1546091, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaaatctctgtgttgaggccc	Protospacer
************* ***********.*****

53. spacer 3.1|950496|31|CP029172|CRISPRCasFinder matches to position: 2860206-2860236, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtattgggggcc	Protospacer
*********************.****** **

54. spacer 4.1|1002771|31|CP029172|CRISPRCasFinder matches to position: 922761-922791, mismatch: 2, identity: 0.935

aagaaccaatacataataaagcataagtgat	CRISPR spacer
aagaaccaatacataataaatcattagtgat	Protospacer
******************** *** ******

55. spacer 4.1|1002771|31|CP029172|CRISPRCasFinder matches to position: 944893-944923, mismatch: 2, identity: 0.935

aagaaccaatacataataaagcataagtgat	CRISPR spacer
aagaaccaatacataataaatcattagtgat	Protospacer
******************** *** ******

56. spacer 8.1|2454222|26|CP029172|CRISPRCasFinder matches to position: 1002548-1002573, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacatagtagcaggcgg	Protospacer
**************** *** *****

57. spacer 8.1|2454222|26|CP029172|CRISPRCasFinder matches to position: 1047483-1047508, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaagctggtgg	Protospacer
*************.*********.**

58. spacer 8.1|2454222|26|CP029172|CRISPRCasFinder matches to position: 1494311-1494336, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaaactggcgg	Protospacer
*************.****.*******

59. spacer 8.1|2454222|26|CP029172|CRISPRCasFinder matches to position: 2245799-2245824, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacaaaagctggcgg	Protospacer
*************.*.**********

60. spacer 8.1|2454222|26|CP029172|CRISPRCasFinder matches to position: 2586045-2586070, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagtagctggcgg	Protospacer
*************.** *********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP029172_1 1.1|357599|25|CP029172|CRISPRCasFinder 357599-357623 25 NC_014792 Enterobacteria phage vB_EcoM-VR7, complete genome 154175-154199 3 0.88
CP029172_1 1.2|357655|25|CP029172|CRISPRCasFinder 357655-357679 25 MW117966 Synechococcus phage S-H9-1, complete genome 42366-42390 4 0.84
CP029172_5 5.1|1985964|26|CP029172|CRISPRCasFinder 1985964-1985989 26 NZ_CP053838 Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence 17379-17404 4 0.846
CP029172_5 5.1|1985964|26|CP029172|CRISPRCasFinder 1985964-1985989 26 NZ_CP017210 Borreliella burgdorferi strain B331 plasmid B331_cp9, complete sequence 2023-2048 4 0.846
CP029172_1 1.2|357655|25|CP029172|CRISPRCasFinder 357655-357679 25 NZ_CP038259 Acinetobacter baumannii strain 39741 plasmid pEH_gr13, complete sequence 11151-11175 5 0.8
CP029172_5 5.1|1985964|26|CP029172|CRISPRCasFinder 1985964-1985989 26 NC_008443 Borrelia burgdorferi strain Ip21 plasmid, complete sequence 5652-5677 5 0.808
CP029172_5 5.1|1985964|26|CP029172|CRISPRCasFinder 1985964-1985989 26 NC_010631 Nostoc punctiforme PCC 73102 plasmid pNPUN01, complete sequence 3460-3485 5 0.808
CP029172_5 5.1|1985964|26|CP029172|CRISPRCasFinder 1985964-1985989 26 NC_010632 Nostoc punctiforme PCC 73102 plasmid pNPUN02, complete sequence 13739-13764 5 0.808
CP029172_1 1.2|357655|25|CP029172|CRISPRCasFinder 357655-357679 25 NZ_CP047617 Lactococcus raffinolactis strain Lr_19_5 plasmid pLraf_19_5_1, complete sequence 79395-79419 6 0.76
CP029172_5 5.1|1985964|26|CP029172|CRISPRCasFinder 1985964-1985989 26 MK448662 Streptococcus satellite phage Javan97, complete genome 6198-6223 6 0.769
CP029172_6 6.1|2234793|34|CP029172|CRISPRCasFinder 2234793-2234826 34 NC_027332 Acinetobacter phage YMC13/03/R2096, complete genome 68639-68672 11 0.676
CP029172_6 6.1|2234793|34|CP029172|CRISPRCasFinder 2234793-2234826 34 KY000079 Acinetobacter phage AM24, complete genome 74925-74958 11 0.676

1. spacer 1.1|357599|25|CP029172|CRISPRCasFinder matches to NC_014792 (Enterobacteria phage vB_EcoM-VR7, complete genome) position: , mismatch: 3, identity: 0.88

ggcgaaaatacagcttacaataatg	CRISPR spacer
gacgaaaatacatattacaataatg	Protospacer
*.**********  ***********

2. spacer 1.2|357655|25|CP029172|CRISPRCasFinder matches to MW117966 (Synechococcus phage S-H9-1, complete genome) position: , mismatch: 4, identity: 0.84

ttggaacagcaatttctacagacaa	CRISPR spacer
ttggaacagcaatttctactggtat	Protospacer
******************* *..* 

3. spacer 5.1|1985964|26|CP029172|CRISPRCasFinder matches to NZ_CP053838 (Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence) position: , mismatch: 4, identity: 0.846

agaatttcaaaaaagaaattctacag	CRISPR spacer
agaatttcaaaaaataaaatctattg	Protospacer
************** *** ****. *

4. spacer 5.1|1985964|26|CP029172|CRISPRCasFinder matches to NZ_CP017210 (Borreliella burgdorferi strain B331 plasmid B331_cp9, complete sequence) position: , mismatch: 4, identity: 0.846

agaatttcaaaaaagaaattctacag	CRISPR spacer
acaatttcaaaaaagaaatattacac	Protospacer
* ***************** .**** 

5. spacer 1.2|357655|25|CP029172|CRISPRCasFinder matches to NZ_CP038259 (Acinetobacter baumannii strain 39741 plasmid pEH_gr13, complete sequence) position: , mismatch: 5, identity: 0.8

ttggaacagcaatttctacagacaa	CRISPR spacer
ctggaacagcaatttctccagaggt	Protospacer
.**************** **** . 

6. spacer 5.1|1985964|26|CP029172|CRISPRCasFinder matches to NC_008443 (Borrelia burgdorferi strain Ip21 plasmid, complete sequence) position: , mismatch: 5, identity: 0.808

agaatttcaaaaaagaaattctacag	CRISPR spacer
ccaatttcaaaaaagaaattttccac	Protospacer
  ******************.* ** 

7. spacer 5.1|1985964|26|CP029172|CRISPRCasFinder matches to NC_010631 (Nostoc punctiforme PCC 73102 plasmid pNPUN01, complete sequence) position: , mismatch: 5, identity: 0.808

agaatttcaaaaaagaaattctacag	CRISPR spacer
tgaatgtcaaaaaagaaattcttgaa	Protospacer
 **** ****************  *.

8. spacer 5.1|1985964|26|CP029172|CRISPRCasFinder matches to NC_010632 (Nostoc punctiforme PCC 73102 plasmid pNPUN02, complete sequence) position: , mismatch: 5, identity: 0.808

agaatttcaaaaaagaaattctacag	CRISPR spacer
tgaatgtcaaaaaagaaattcttgaa	Protospacer
 **** ****************  *.

9. spacer 1.2|357655|25|CP029172|CRISPRCasFinder matches to NZ_CP047617 (Lactococcus raffinolactis strain Lr_19_5 plasmid pLraf_19_5_1, complete sequence) position: , mismatch: 6, identity: 0.76

ttggaacagcaatttctacagacaa	CRISPR spacer
ctggaacagcaatttctacattatc	Protospacer
.*******************     

10. spacer 5.1|1985964|26|CP029172|CRISPRCasFinder matches to MK448662 (Streptococcus satellite phage Javan97, complete genome) position: , mismatch: 6, identity: 0.769

agaatttcaaaaaagaaattctacag	CRISPR spacer
gctttttcaaaaaagaaattctagac	Protospacer
.   ******************* * 

11. spacer 6.1|2234793|34|CP029172|CRISPRCasFinder matches to NC_027332 (Acinetobacter phage YMC13/03/R2096, complete genome) position: , mismatch: 11, identity: 0.676

tgctggtaccacgatgcgtcttgatgtagtgcta	CRISPR spacer
gatcaataccacgatgcgtcttgaagtggtagaa	Protospacer
 .....****************** **.**.  *

12. spacer 6.1|2234793|34|CP029172|CRISPRCasFinder matches to KY000079 (Acinetobacter phage AM24, complete genome) position: , mismatch: 11, identity: 0.676

tgctggtaccacgatgcgtcttgatgtagtgcta	CRISPR spacer
gatcaataccacgatgcgtcttgaagtggtagaa	Protospacer
 .....****************** **.**.  *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 60167 : 111385 47 Streptococcus_phage(40.0%) transposase NA
DBSCAN-SWA_2 410697 : 459693 68 Staphylococcus_phage(91.04%) holin,integrase,transposase,capsid,protease,terminase,head,portal,tail attL 407342:407357|attR 468246:468261
DBSCAN-SWA_3 858880 : 868032 11 Hokovirus(14.29%) transposase NA
DBSCAN-SWA_4 880002 : 894318 17 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_5 1059025 : 1082250 25 Streptococcus_phage(94.74%) integrase attL 1047482:1047499|attR 1086525:1086542
DBSCAN-SWA_6 1093422 : 1151161 54 Planktothrix_phage(50.0%) bacteriocin,holin,transposase,protease,tRNA NA
DBSCAN-SWA_7 1183583 : 1192056 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_8 1390301 : 1456779 58 Staphylococcus_phage(29.41%) tRNA,protease,transposase NA
DBSCAN-SWA_9 1737281 : 1745593 7 Staphylococcus_phage(16.67%) tRNA NA
DBSCAN-SWA_10 1814906 : 1823946 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_11 1957232 : 2005078 48 Staphylococcus_phage(91.89%) tRNA,protease,transposase NA
DBSCAN-SWA_12 2096214 : 2136606 36 Staphylococcus_phage(33.33%) tRNA,protease,transposase NA
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
CP029172.1|AWI96812.1|1982023_1982248_-|hypothetical-protein 1982023_1982248_- 74 aa aa NA NA NA 1957232-2005078 yes