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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP028116 Escherichia coli O26 str. RM8426 chromosome, complete genome 2 crisprs DinG,PrimPol,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e 0 9 21 0
CP028115 Escherichia coli O26 str. RM8426 plasmid pRM8426, complete sequence 0 crisprs NA 0 0 2 0

Results visualization

1. CP028116
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028116_1 3728119-3728635 TypeI-E I-E
8 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028116_2 3754336-3754913 Orphan I-E
9 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP028116_1 1.1|3728148|32|CP028116|PILER-CR,CRISPRCasFinder,CRT 3728148-3728179 32 NZ_CP050442 Tolypothrix sp. PCC 7910 plasmid unnamed2, complete sequence 41503-41534 6 0.812
CP028116_2 2.1|3754365|32|CP028116|CRISPRCasFinder 3754365-3754396 32 KR080197 Mycobacterium phage FlagStaff, complete genome 15476-15507 7 0.781
CP028116_1 1.5|3728392|32|CP028116|PILER-CR,CRISPRCasFinder,CRT 3728392-3728423 32 NZ_CP030355 Novosphingobium sp. P6W plasmid pP6W2, complete sequence 141173-141204 8 0.75
CP028116_2 2.1|3754365|32|CP028116|CRISPRCasFinder 3754365-3754396 32 NZ_CP014600 Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence 15418-15449 8 0.75
CP028116_2 2.2|3754426|32|CP028116|CRISPRCasFinder 3754426-3754457 32 MK814759 Gordonia phage Reyja, complete genome 4467-4498 8 0.75
CP028116_2 2.9|3754853|32|CP028116|CRISPRCasFinder 3754853-3754884 32 NC_012852 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132504, complete sequence 256608-256639 8 0.75
CP028116_1 1.3|3728270|32|CP028116|PILER-CR,CRISPRCasFinder,CRT 3728270-3728301 32 LT599585 Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid 32377-32408 9 0.719
CP028116_1 1.6|3728453|32|CP028116|PILER-CR,CRISPRCasFinder,CRT 3728453-3728484 32 NC_010553 Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence 292180-292211 9 0.719
CP028116_1 1.6|3728453|32|CP028116|PILER-CR,CRISPRCasFinder,CRT 3728453-3728484 32 NZ_CP020740 [Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence 20747-20778 9 0.719
CP028116_2 2.1|3754365|32|CP028116|CRISPRCasFinder 3754365-3754396 32 NZ_CP009292 Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence 139210-139241 9 0.719
CP028116_2 2.4|3754548|32|CP028116|CRISPRCasFinder 3754548-3754579 32 NZ_CP030074 Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence 224876-224907 9 0.719
CP028116_2 2.9|3754853|32|CP028116|CRISPRCasFinder 3754853-3754884 32 NZ_CP050094 Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b4, complete sequence 196778-196809 9 0.719
CP028116_2 2.9|3754853|32|CP028116|CRISPRCasFinder 3754853-3754884 32 NZ_CP050101 Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b6, complete sequence 151768-151799 9 0.719
CP028116_2 2.9|3754853|32|CP028116|CRISPRCasFinder 3754853-3754884 32 NZ_CP050106 Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence 508685-508716 9 0.719
CP028116_2 2.9|3754853|32|CP028116|CRISPRCasFinder 3754853-3754884 32 NZ_CP025016 Rhizobium leguminosarum strain Norway plasmid pRLN4, complete sequence 133778-133809 9 0.719
CP028116_2 2.9|3754853|32|CP028116|CRISPRCasFinder 3754853-3754884 32 NC_008379 Rhizobium leguminosarum bv. viciae 3841 plasmid pRL9, complete sequence 180274-180305 9 0.719
CP028116_2 2.9|3754853|32|CP028116|CRISPRCasFinder 3754853-3754884 32 NZ_CP053442 Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence 151061-151092 9 0.719
CP028116_2 2.9|3754853|32|CP028116|CRISPRCasFinder 3754853-3754884 32 NZ_CP018233 Rhizobium leguminosarum strain Vaf-108 plasmid unnamed5, complete sequence 21422-21453 9 0.719
CP028116_2 2.9|3754853|32|CP028116|CRISPRCasFinder 3754853-3754884 32 NZ_CP025506 Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence 499023-499054 9 0.719
CP028116_2 2.9|3754853|32|CP028116|CRISPRCasFinder 3754853-3754884 32 NZ_CP016293 Rhizobium leguminosarum strain Vaf10 plasmid unnamed5, complete sequence 106143-106174 9 0.719
CP028116_2 2.9|3754853|32|CP028116|CRISPRCasFinder 3754853-3754884 32 NZ_CP050111 Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence 508869-508900 9 0.719
CP028116_2 2.9|3754853|32|CP028116|CRISPRCasFinder 3754853-3754884 32 NZ_CP048283 Rhizobium leguminosarum bv. viciae 248 plasmid pRle248c, complete sequence 130036-130067 9 0.719
CP028116_2 2.9|3754853|32|CP028116|CRISPRCasFinder 3754853-3754884 32 NZ_CP030763 Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence 172635-172666 9 0.719
CP028116_2 2.9|3754853|32|CP028116|CRISPRCasFinder 3754853-3754884 32 NZ_CP022668 Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence 387130-387161 9 0.719
CP028116_2 2.9|3754853|32|CP028116|CRISPRCasFinder 3754853-3754884 32 NZ_CP022569 Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK05, complete sequence 4795-4826 9 0.719
CP028116_2 2.9|3754853|32|CP028116|CRISPRCasFinder 3754853-3754884 32 NZ_CP050088 Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence 158950-158981 9 0.719
CP028116_1 1.5|3728392|32|CP028116|PILER-CR,CRISPRCasFinder,CRT 3728392-3728423 32 MF417892 Uncultured Caudovirales phage clone 2F_2, partial genome 39822-39853 10 0.688
CP028116_1 1.7|3728514|32|CP028116|PILER-CR,CRISPRCasFinder,CRT 3728514-3728545 32 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 903982-904013 10 0.688
CP028116_2 2.1|3754365|32|CP028116|CRISPRCasFinder 3754365-3754396 32 NZ_CP012383 Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence 14130-14161 10 0.688
CP028116_1 1.7|3728514|32|CP028116|PILER-CR,CRISPRCasFinder,CRT 3728514-3728545 32 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1467285-1467316 11 0.656

1. spacer 1.1|3728148|32|CP028116|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050442 (Tolypothrix sp. PCC 7910 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

aaaaccaaacttctccataaattccatagccg	CRISPR spacer
attactaaacttctgcataaattccataggag	Protospacer
*  **.******** **************  *

2. spacer 2.1|3754365|32|CP028116|CRISPRCasFinder matches to KR080197 (Mycobacterium phage FlagStaff, complete genome) position: , mismatch: 7, identity: 0.781

aacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
aacccggcgaacggcatcgcggcgccggcgtc	Protospacer
*** . * .****** ******** *******

3. spacer 1.5|3728392|32|CP028116|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030355 (Novosphingobium sp. P6W plasmid pP6W2, complete sequence) position: , mismatch: 8, identity: 0.75

tcttcgcgggtaatcaatgatgattcagtttc	CRISPR spacer
tcttcgcggataatcaaagatgatcgtgaatt	Protospacer
*********.******* ******.  *  *.

4. spacer 2.1|3754365|32|CP028116|CRISPRCasFinder matches to NZ_CP014600 (Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

aacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
ggctgtggaaagggctgcgcggcggcggcgac	Protospacer
..*  .***** **** ************* *

5. spacer 2.2|3754426|32|CP028116|CRISPRCasFinder matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

-gacagaacggcctcagtagtctcgtcaggctc	CRISPR spacer
ccaccg-ctggccccagtagcctcgtcaggctt	Protospacer
  ** *  .****.******.***********.

6. spacer 2.9|3754853|32|CP028116|CRISPRCasFinder matches to NC_012852 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132504, complete sequence) position: , mismatch: 8, identity: 0.75

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggtgctgtcgggagcggggaggatgagagaat	Protospacer
. *.******* *** ***********...**

7. spacer 1.3|3728270|32|CP028116|PILER-CR,CRISPRCasFinder,CRT matches to LT599585 (Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid) position: , mismatch: 9, identity: 0.719

gagagtgctgacaggtgtctcgattacctgat	CRISPR spacer
ggctttgctggcaggtctctcgattaccttgg	Protospacer
*.   *****.***** ************ . 

8. spacer 1.6|3728453|32|CP028116|PILER-CR,CRISPRCasFinder,CRT matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 9, identity: 0.719

gaacgcaatatcacggcgttctgcggcctcgg	CRISPR spacer
atcggcaatatcacggcgtttttcggcgccgc	Protospacer
.   ****************.* **** .** 

9. spacer 1.6|3728453|32|CP028116|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020740 ([Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence) position: , mismatch: 9, identity: 0.719

gaacgcaatatcacggcgttctgcggcctcgg	CRISPR spacer
accggcaacatcacggcgttcttcggcgccgc	Protospacer
.   ****.************* **** .** 

10. spacer 2.1|3754365|32|CP028116|CRISPRCasFinder matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 9, identity: 0.719

aacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
cccgggaaaaacgggttcgcggcggcggcttc	Protospacer
  *.  ..****** ************** **

11. spacer 2.4|3754548|32|CP028116|CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcatagccaggctgatccggcgacggcctta	CRISPR spacer
gcagcagaccggctgatccggcgacggccccg	Protospacer
*  ..** * *******************...

12. spacer 2.9|3754853|32|CP028116|CRISPRCasFinder matches to NZ_CP050094 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b4, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

13. spacer 2.9|3754853|32|CP028116|CRISPRCasFinder matches to NZ_CP050101 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b6, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

14. spacer 2.9|3754853|32|CP028116|CRISPRCasFinder matches to NZ_CP050106 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

15. spacer 2.9|3754853|32|CP028116|CRISPRCasFinder matches to NZ_CP025016 (Rhizobium leguminosarum strain Norway plasmid pRLN4, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

16. spacer 2.9|3754853|32|CP028116|CRISPRCasFinder matches to NC_008379 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL9, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

17. spacer 2.9|3754853|32|CP028116|CRISPRCasFinder matches to NZ_CP053442 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

18. spacer 2.9|3754853|32|CP028116|CRISPRCasFinder matches to NZ_CP018233 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

19. spacer 2.9|3754853|32|CP028116|CRISPRCasFinder matches to NZ_CP025506 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

20. spacer 2.9|3754853|32|CP028116|CRISPRCasFinder matches to NZ_CP016293 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

21. spacer 2.9|3754853|32|CP028116|CRISPRCasFinder matches to NZ_CP050111 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

22. spacer 2.9|3754853|32|CP028116|CRISPRCasFinder matches to NZ_CP048283 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248c, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

23. spacer 2.9|3754853|32|CP028116|CRISPRCasFinder matches to NZ_CP030763 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

24. spacer 2.9|3754853|32|CP028116|CRISPRCasFinder matches to NZ_CP022668 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

25. spacer 2.9|3754853|32|CP028116|CRISPRCasFinder matches to NZ_CP022569 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK05, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

26. spacer 2.9|3754853|32|CP028116|CRISPRCasFinder matches to NZ_CP050088 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence) position: , mismatch: 9, identity: 0.719

actactgtcggtagctgggaggatgaggagat	CRISPR spacer
ggcgctgtcgggagcggggaggatgagagaat	Protospacer
. ..******* *** ***********...**

27. spacer 1.5|3728392|32|CP028116|PILER-CR,CRISPRCasFinder,CRT matches to MF417892 (Uncultured Caudovirales phage clone 2F_2, partial genome) position: , mismatch: 10, identity: 0.688

tcttcgcgggtaatcaatgatgattcagtttc	CRISPR spacer
cagttgcaggtaatcaatgatgatgcagccca	Protospacer
.  *.**.**************** ***... 

28. spacer 1.7|3728514|32|CP028116|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.688

caaaatattacgagcttcgtcaggccatggac	CRISPR spacer
tcttgcatcacgagcttcgtcaggacatgcgc	Protospacer
.   ..**.*************** **** .*

29. spacer 2.1|3754365|32|CP028116|CRISPRCasFinder matches to NZ_CP012383 (Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence) position: , mismatch: 10, identity: 0.688

aacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
gaggacggaagcggcttcgccgcggcgggcaa	Protospacer
.* . *****.********* *******    

30. spacer 1.7|3728514|32|CP028116|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

caaaatattacgagcttcgtcaggccatggac	CRISPR spacer
tcttgcatcacgagcttcgtcaggacatgcgg	Protospacer
.   ..**.*************** **** . 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 601768 : 670639 83 Enterobacteria_phage(57.89%) tail,transposase,lysis,integrase,tRNA,head,terminase,protease,capsid,portal attL 611929:611975|attR 662113:662159
DBSCAN-SWA_2 890167 : 940674 67 Enterobacteria_phage(51.61%) transposase,holin,tail,lysis,integrase,protease,terminase,portal attL 907703:907717|attR 939864:939878
DBSCAN-SWA_3 1155779 : 1293594 171 Escherichia_phage(35.4%) transposase,holin,tail,lysis,integrase,head,protease,terminase,capsid,portal attL 1208960:1208976|attR 1307022:1307038
DBSCAN-SWA_4 1474492 : 1530989 73 Stx2-converting_phage(29.63%) transposase,holin,tail,lysis,integrase,head,terminase,protease,capsid attL 1469263:1469277|attR 1476611:1476625
DBSCAN-SWA_5 1561483 : 1639742 108 Escherichia_phage(31.76%) transposase,holin,tail,lysis,tRNA,head,terminase,capsid NA
DBSCAN-SWA_6 1752290 : 1766504 19 Escherichia_phage(42.86%) holin,transposase,tail NA
DBSCAN-SWA_7 1868767 : 1924958 75 Escherichia_phage(43.94%) transposase,holin,tail,lysis,tRNA,head,terminase,capsid,portal NA
DBSCAN-SWA_8 2126500 : 2226097 130 Enterobacteria_phage(46.88%) tail,transposase,holin,lysis,head,terminase,capsid,portal NA
DBSCAN-SWA_9 2242382 : 2255555 20 uncultured_Caudovirales_phage(88.89%) tail,head,protease,terminase,capsid,portal NA
DBSCAN-SWA_10 2377922 : 2422782 57 Enterobacteria_phage(86.05%) tail,holin,integrase,tRNA,terminase,capsid,plate,portal attL 2380325:2380349|attR 2415423:2415447
DBSCAN-SWA_11 2491906 : 2589153 118 Escherichia_phage(30.3%) transposase,tail,holin,lysis,integrase,tRNA,head,protease,terminase,capsid,portal attL 2531470:2531484|attR 2590600:2590614
DBSCAN-SWA_12 2791739 : 2797057 10 Stx2-converting_phage(50.0%) transposase NA
DBSCAN-SWA_13 2830693 : 2836995 7 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_14 2928437 : 2938365 9 Enterobacteria_phage(62.5%) transposase NA
DBSCAN-SWA_15 3015806 : 3111372 105 Enterobacteria_phage(37.84%) tail,transposase,holin,lysis,integrase,head,terminase,capsid attL 3046338:3046356|attR 3120588:3120606
DBSCAN-SWA_16 3200045 : 3273559 95 Enterobacteria_phage(47.54%) tail,transposase,holin,lysis,tRNA,head,terminase,capsid,portal NA
DBSCAN-SWA_17 3528273 : 3631832 111 Escherichia_phage(28.57%) tail,holin,lysis,tRNA,head,terminase,capsid NA
DBSCAN-SWA_18 3704623 : 3711763 6 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_19 3863817 : 3871766 9 Stx2-converting_phage(42.86%) integrase,transposase attL 3861774:3861790|attR 3870859:3870875
DBSCAN-SWA_20 4920371 : 4933704 17 Enterobacteria_phage(66.67%) transposase NA
DBSCAN-SWA_21 5495778 : 5508342 14 Enterobacteria_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP028115
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 7193 : 61172 52 Stx2-converting_phage(38.89%) integrase,transposase,bacteriocin attL 2429:2443|attR 47965:47979
DBSCAN-SWA_2 70580 : 82357 8 Stx2-converting_phage(83.33%) transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage