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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP028704 Escherichia coli strain VH1 chromosome, complete genome 9 crisprs PD-DExK,csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4 1 14 6 0
CP028705 Escherichia coli strain VH1 plasmid pVH1, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. CP028704
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028704_1 982356-982749 Unclear I-E
6 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028704_2 1008300-1009062 TypeI-E I-E
12 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028704_3 1535370-1535487 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028704_4 2137708-2137831 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028704_6 3047295-3047439 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028704_7 3301763-3301859 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028704_8 3442004-3442148 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028704_9 3715495-3715629 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028704_10 4329003-4329135 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 CP028704.1 3776599-3776633 1 0.971
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 CP028704.1 844305-844339 2 0.943

1. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to position: 3776599-3776633, mismatch: 1, identity: 0.971 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
ttcagcgcctgatgcgacgctggcgcgtcttatca	Protospacer
****.******************************

2. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to position: 844305-844339, mismatch: 2, identity: 0.943 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
tttatcgcctgatgcgacgctggcgcgtcttatca	Protospacer
**.* ******************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP028704_5 5.1|2785028|40|CP028704|CRISPRCasFinder 2785028-2785067 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 0 1.0
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 101196-101230 1 0.971
CP028704_4 4.1|2137751|38|CP028704|CRISPRCasFinder 2137751-2137788 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 56080-56114 3 0.914
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 14148-14182 3 0.914
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 MT230402 Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence 271-305 3 0.914
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 31251-31285 3 0.914
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 12112-12146 3 0.914
CP028704_1 1.2|982445|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 982445-982477 33 NZ_LR134258 Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence 3574-3606 4 0.879
CP028704_1 1.2|982445|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 982445-982477 33 LR134281 Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6 3567-3599 4 0.879
CP028704_1 1.2|982445|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 982445-982477 33 KY271401 Klebsiella phage 1 LV-2017, complete genome 21043-21075 4 0.879
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 165464-165498 4 0.886
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 MT230402 Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence 271-321 4 0.922
CP028704_2 2.8|1008758|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008758-1008789 32 NC_021229 Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919 65474-65505 5 0.844
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 87137-87171 5 0.857
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4114-4148 5 0.857
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 208981-209015 5 0.857
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4113-4147 5 0.857
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 219475-219509 5 0.857
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 7392-7426 5 0.857
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 84216-84250 5 0.857
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4113-4147 5 0.857
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 210309-210343 5 0.857
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4113-4147 5 0.857
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 191264-191298 5 0.857
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 30177-30211 5 0.857
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 MT230312 Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence 170-204 5 0.857
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_AP023209 Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence 88-122 5 0.857
CP028704_1 1.2|982445|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 982445-982477 33 KY653119 Morganella phage IME1369_02, complete genome 18216-18248 6 0.818
CP028704_2 2.1|1008329|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008329-1008360 32 NZ_CP009293 Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence 152196-152227 6 0.812
CP028704_2 2.2|1008390|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008390-1008421 32 KY883647 Vibrio phage JSF33, complete genome 9760-9791 6 0.812
CP028704_2 2.8|1008758|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008758-1008789 32 NZ_CP017422 Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence 208287-208318 6 0.812
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 3372-3406 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 43-77 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4013-4047 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 208887-208921 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 3371-3405 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 42-76 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4012-4046 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 219381-219415 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 3371-3405 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 42-76 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4012-4046 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 210215-210249 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 3371-3405 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 42-76 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4012-4046 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 191170-191204 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 15018-15052 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 18350-18384 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 14272-14306 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP019246 Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence 41415-41449 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NC_049343 Escherichia phage 500465-2, complete genome 28333-28367 6 0.829
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 61916-61950 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 6804-6838 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 13988-14022 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229148-229182 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229249-229283 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229350-229384 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229451-229485 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239642-239676 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239743-239777 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239844-239878 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239945-239979 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 6744-6778 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 83590-83624 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230554-230588 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230655-230689 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230756-230790 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230857-230891 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211524-211558 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211625-211659 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211726-211760 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211827-211861 7 0.8
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 118733-118767 7 0.8
CP028704_1 1.3|982506|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 982506-982538 33 NZ_CP007129 Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence 755172-755204 8 0.758
CP028704_2 2.1|1008329|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008329-1008360 32 NZ_CP007130 Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence 750410-750441 8 0.75
CP028704_2 2.2|1008390|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008390-1008421 32 MN855762 Bacteriophage sp. isolate 505, complete genome 4840-4871 8 0.75
CP028704_2 2.2|1008390|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008390-1008421 32 NC_020548 Azoarcus sp. KH32C plasmid pAZKH, complete sequence 224460-224491 8 0.75
CP028704_2 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008574-1008606 33 NC_013856 Azospirillum sp. B510 plasmid pAB510b, complete sequence 375744-375776 8 0.758
CP028704_2 2.8|1008758|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008758-1008789 32 MK113951 Phage 5P_3, complete genome 11967-11998 8 0.75
CP028704_2 2.8|1008758|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008758-1008789 32 AP017924 Ralstonia phage RP12 DNA, complete genome 11643-11674 8 0.75
CP028704_2 2.12|1009002|32|CP028704|CRISPRCasFinder,CRT 1009002-1009033 32 NZ_AP018516 Acetobacter orientalis strain FAN1 plasmid pAOF1, complete sequence 48296-48327 8 0.75
CP028704_2 2.1|1008329|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008329-1008360 32 MN234174 Mycobacterium phage Efra2, complete genome 35614-35645 9 0.719
CP028704_2 2.1|1008329|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008329-1008360 32 MN234165 Mycobacterium phage Yunkel11, complete genome 35570-35601 9 0.719
CP028704_2 2.1|1008329|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008329-1008360 32 MN234201 Mycobacterium phage Guanica15, complete genome 35571-35602 9 0.719
CP028704_2 2.2|1008390|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008390-1008421 32 NZ_CP015585 Roseomonas gilardii strain U14-5 plasmid 1, complete sequence 104261-104292 9 0.719
CP028704_2 2.2|1008390|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008390-1008421 32 NZ_CP054618 Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence 142898-142929 9 0.719
CP028704_2 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008574-1008606 33 NZ_CP010957 Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence 26182-26214 9 0.727
CP028704_9 9.1|3715545|35|CP028704|CRISPRCasFinder 3715545-3715579 35 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 64295-64329 9 0.743
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 14239-14289 9 0.824
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 7392-7442 9 0.824
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 84216-84266 9 0.824
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052797 Salmonella enterica subsp. enterica serovar Infantis strain CVM N18S2039 plasmid pN18S2039, complete sequence 45808-45839 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052795 Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence 282589-282620 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 NZ_CP047882 Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence 94965-94996 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052804 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence 304288-304319 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP038508 Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence 112376-112407 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052802 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence 315682-315713 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052788 Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence 203378-203409 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052840 Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence 127648-127679 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052786 Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence 215302-215333 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052838 Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence 214483-214514 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 NZ_CP028316 Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain CFSAN067217 plasmid pSC-31-2, complete sequence 108893-108924 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP051676 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence 83669-83700 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052783 Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0679 plasmid pN19S0679-1, complete sequence 194119-194150 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052836 Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence 18410-18441 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 NZ_CP022063 Salmonella enterica strain FDAARGOS_312 plasmid unnamed3, complete sequence 64615-64646 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052781 Salmonella enterica strain CVM N19S0949 plasmid pN19S0949, complete sequence 169480-169511 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052834 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S041 plasmid pN17S0041, complete sequence 6457-6488 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052793 Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0388 plasmid pN19S0388, complete sequence 25758-25789 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052779 Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence 140403-140434 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052832 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence 160727-160758 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 NZ_CP031362 Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p3, complete sequence 140152-140183 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052830 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1105 plasmid pN17S1105, complete sequence 193709-193740 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052828 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence 126974-127005 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052826 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence 110984-111015 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 NZ_CP016409 Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence 94916-94947 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052824 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1265 plasmid pN17S1265, complete sequence 91497-91528 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052822 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1349 plasmid pN17S1349, complete sequence 110984-111015 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 NZ_CP016407 Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence 94916-94947 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052820 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1442 plasmid pN17S1442, complete sequence 94916-94947 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 NZ_CP016413 Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence 94916-94947 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 NZ_CP016411 Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence 94916-94947 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052816 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1598 plasmid pN17S1598 165317-165348 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052814 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence 99109-99140 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 NZ_CP022662 Salmonella enterica subsp. enterica strain RM11065 plasmid pRM11065-2, complete sequence 54379-54410 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052812 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S376 plasmid pN17S0376, complete sequence 1671-1702 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052810 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S535 plasmid pN17S0535, complete sequence 212751-212782 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052808 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S637 plasmid pN17S0637, complete sequence 306376-306407 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052806 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence 164579-164610 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052791 Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0552 plasmid pN17S0637, complete sequence 168074-168105 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052818 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence 190524-190555 10 0.688
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 CP052799 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S990 plasmid pN17S0990-1, complete sequence 6457-6488 10 0.688
CP028704_2 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008574-1008606 33 CP046443 Pseudomonas coronafaciens pv. coronafaciens strain B19001 plasmid unnamed2, complete sequence 31933-31965 10 0.697
CP028704_2 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008574-1008606 33 NZ_LT963392 Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP1, complete sequence 103013-103045 10 0.697
CP028704_2 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008574-1008606 33 NZ_LT963392 Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP1, complete sequence 110510-110542 10 0.697
CP028704_2 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008574-1008606 33 NZ_CP034079 Pseudomonas syringae pv. pisi str. PP1 plasmid pPP1-1, complete sequence 48454-48486 10 0.697
CP028704_2 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008574-1008606 33 NZ_CP034080 Pseudomonas syringae pv. pisi str. PP1 plasmid pPP1-2, complete sequence 39480-39512 10 0.697
CP028704_2 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008574-1008606 33 NC_005918 Pseudomonas syringae pv. maculicola strain ES4326 plasmid pPMA4326A, complete sequence 31117-31149 10 0.697
CP028704_2 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008574-1008606 33 NZ_CP047262 Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326A, complete sequence 30966-30998 10 0.697
CP028704_2 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008574-1008606 33 NZ_CP026560 Pseudomonas amygdali pv. morsprunorum strain R15244 plasmid p3_tig5, complete sequence 19118-19150 10 0.697
CP028704_2 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008574-1008606 33 NZ_LT963406 Pseudomonas syringae pv. avii isolate CFBP3846 plasmid PP4, complete sequence 54820-54852 10 0.697
CP028704_2 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008574-1008606 33 LT985193 Pseudomonas syringae strain CFBP 2116 genome assembly, plasmid: PP2 32077-32109 10 0.697
CP028704_2 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008574-1008606 33 NZ_LT963393 Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP2, complete sequence 50597-50629 10 0.697
CP028704_2 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008574-1008606 33 NZ_LT985210 Pseudomonas syringae pv. cerasicola strain CFBP 6110 plasmid PP1, complete sequence 105842-105874 10 0.697
CP028704_2 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008574-1008606 33 NZ_LT985211 Pseudomonas syringae pv. cerasicola strain CFBP 6110 plasmid PP2, complete sequence 84272-84304 10 0.697
CP028704_2 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008697-1008728 32 NZ_CP028970 Aminobacter sp. MSH1 plasmid pUSP2, complete sequence 156123-156154 10 0.688
CP028704_2 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008697-1008728 32 NZ_CP053984 Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence 21888-21919 10 0.688
CP028704_2 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008697-1008728 32 NC_010935 Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence 28766-28797 10 0.688
CP028704_2 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008697-1008728 32 JX469826 Uncultured bacterium plasmid pB12, complete sequence 11283-11314 10 0.688
CP028704_2 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008697-1008728 32 JN106171 Uncultured bacterium plasmid pAKD26, complete sequence 11289-11320 10 0.688
CP028704_2 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008697-1008728 32 NC_016968 Comamonas testosteroni plasmid pTB30, complete sequence 11287-11318 10 0.688
CP028704_2 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008697-1008728 32 NC_016978 Comamonas testosteroni plasmid pI2, complete sequence 11272-11303 10 0.688
CP028704_2 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008697-1008728 32 NZ_CP017760 Cupriavidus necator strain NH9 plasmid pENH91, complete sequence 67078-67109 10 0.688
CP028704_2 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008697-1008728 32 NZ_CP053554 Diaphorobacter sp. JS3050 plasmid pDCNB, complete sequence 4235-4266 10 0.688
CP028704_2 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008697-1008728 32 NC_019263 Delftia acidovorans plasmid pLME1, complete sequence 11288-11319 10 0.688
CP028704_2 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008697-1008728 32 NC_019264 Delftia acidovorans plasmid pNB8c, complete sequence 11288-11319 10 0.688
CP028704_2 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008697-1008728 32 NC_019283 Delftia acidovorans plasmid pC1-1, complete sequence 11288-11319 10 0.688
CP028704_2 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008697-1008728 32 NC_006830 Achromobacter xylosoxidans A8 plasmid pA81, complete sequence 11350-11381 10 0.688
CP028704_2 2.8|1008758|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008758-1008789 32 NC_002580 Propionibacterium freudenreichii plasmid p545, complete sequence 2898-2929 10 0.688
CP028704_8 8.1|3442047|59|CP028704|CRISPRCasFinder 3442047-3442105 59 MT230312 Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence 97-155 10 0.831
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4114-4164 10 0.804
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 208981-209031 10 0.804
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4113-4163 10 0.804
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 219475-219525 10 0.804
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4113-4163 10 0.804
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 210309-210359 10 0.804
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4113-4163 10 0.804
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 191264-191314 10 0.804
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 12112-12162 10 0.804
CP028704_1 1.2|982445|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 982445-982477 33 MF158039 Shigella phage Sf12, complete genome 4974-5006 11 0.667
CP028704_1 1.2|982445|33|CP028704|PILER-CR,CRISPRCasFinder,CRT 982445-982477 33 MF158042 Shigella phage Sd1, complete genome 937-969 11 0.667
CP028704_2 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT 1008451-1008482 32 NZ_CP026128 Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence 49165-49196 11 0.656
CP028704_8 8.1|3442047|59|CP028704|CRISPRCasFinder 3442047-3442105 59 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 40375-40433 11 0.814
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 87121-87171 11 0.784
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229334-229384 11 0.784
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 43-93 11 0.784
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239828-239878 11 0.784
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 42-92 11 0.784
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 18334-18384 11 0.784
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230740-230790 11 0.784
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 42-92 11 0.784
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211710-211760 11 0.784
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 42-92 11 0.784
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 MT230312 Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence 154-204 11 0.784
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 30161-30211 12 0.765
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229233-229283 12 0.765
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229435-229485 12 0.765
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239727-239777 12 0.765
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239929-239979 12 0.765
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230639-230689 12 0.765
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230841-230891 12 0.765
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211609-211659 12 0.765
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211811-211861 12 0.765
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 3372-3422 13 0.745
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 3371-3421 13 0.745
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 15002-15052 13 0.745
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 3371-3421 13 0.745
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 3371-3421 13 0.745
CP028704_10 10.1|4329044|51|CP028704|CRISPRCasFinder 4329044-4329094 51 NZ_AP023209 Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence 72-122 13 0.745

1. spacer 5.1|2785028|40|CP028704|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0 

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

2. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.971 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
ttcagcgcctgatgcgacgctggcgcgtcttatca	Protospacer
****.******************************

3. spacer 4.1|2137751|38|CP028704|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947 

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

4. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 3, identity: 0.914 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
ctcaacgcctgatgcgacgctggcgcgtcttagcg	Protospacer
.******************************* *.

5. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 3, identity: 0.914 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
atcaacgcctgatgcgtcgctgtcgcgtcttatca	Protospacer
 *************** ***** ************

6. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 3, identity: 0.914 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
atcaatgcctgatgcgacgctgtcgcgtcttatca	Protospacer
 ****.**************** ************

7. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 3, identity: 0.914 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
atcaatgcctgatgcgacgctgtcgcgtcttatca	Protospacer
 ****.**************** ************

8. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 3, identity: 0.914 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
ttcggtgcctgatgcgacgctggcgcgtcttatca	Protospacer
***...*****************************

9. spacer 1.2|982445|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.879 

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

10. spacer 1.2|982445|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 4, identity: 0.879 

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

11. spacer 1.2|982445|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 4, identity: 0.879 

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

12. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 4, identity: 0.886 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
tgtaacgcctgatgcgacgctgacgcgtcttatct	Protospacer
* .*******************.***********

13. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 4, identity: 0.922 

gcaatag-ttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
-taacggtttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	Protospacer
 .**..* ********************************************

14. spacer 2.8|1008758|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NC_021229 (Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919) position: , mismatch: 5, identity: 0.844 

-ctgctggagctggctgcaaggcaagccgccca	CRISPR spacer
tccgctcg-gcaggctgcaacgcaagccgccca	Protospacer
 *.*** * ** ******** ************

15. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 5, identity: 0.857 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
cacgatgcctgatgcgacgctgccgcgtcttatca	Protospacer
. *.*.**************** ************

16. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 5, identity: 0.857 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatca	Protospacer
 . .*.*****************************

17. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 5, identity: 0.857 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
tcagatgcctgatgcgacgctgacgcgtcttatca	Protospacer
*. .*.****************.************

18. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 5, identity: 0.857 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatca	Protospacer
 . .*.*****************************

19. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 5, identity: 0.857 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
tcagatgcctgatgcgacgctgacgcgtcttatca	Protospacer
*. .*.****************.************

20. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 5, identity: 0.857 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
ccggatgcctgatgcgacgctggcgcgtcttatca	Protospacer
.. .*.*****************************

21. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 5, identity: 0.857 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
ccggatgcctgatgcgacgctggcgcgtcttatca	Protospacer
.. .*.*****************************

22. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 5, identity: 0.857 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatca	Protospacer
 . .*.*****************************

23. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 5, identity: 0.857 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
tcagatgcctgatgcgacgctgacgcgtcttatca	Protospacer
*. .*.****************.************

24. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 5, identity: 0.857 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatca	Protospacer
 . .*.*****************************

25. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 5, identity: 0.857 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
tcagatgcctgatgcgacgctgacgcgtcttatca	Protospacer
*. .*.****************.************

26. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 5, identity: 0.857 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
tctgatgcctgatgcgacgctgacgcgtcttatca	Protospacer
*...*.****************.************

27. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 5, identity: 0.857 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
attgaagcctgatgcgacgctgacgcgtcttatca	Protospacer
 *..* ****************.************

28. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 5, identity: 0.857 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gccgatgcctgatgcgacgctgacgcgtcttatca	Protospacer
 .*.*.****************.************

29. spacer 1.2|982445|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 6, identity: 0.818 

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
aggttgtgcggcgttaacgctgaccagcatttc	Protospacer
 *  * ******.******** ***********

30. spacer 2.1|1008329|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009293 (Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence) position: , mismatch: 6, identity: 0.812 

ctttcgcagacgcgcggcgatacgctcacgca	CRISPR spacer
ctcacgcagacgcgcggcgacacgctcattct	Protospacer
**. ****************.*******. *

31. spacer 2.2|1008390|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to KY883647 (Vibrio phage JSF33, complete genome) position: , mismatch: 6, identity: 0.812 

cagccgaagccaaaggtgatgccgaacacgct	CRISPR spacer
aagccaaagccaaagctgatgccgaaactgct	Protospacer
 ****.********* **********  .***

32. spacer 2.8|1008758|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017422 (Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence) position: , mismatch: 6, identity: 0.812 

-ctgctggagctggctgcaaggcaagccgccca	CRISPR spacer
tccgctcg-gcaggctgcaacgcaagccgcccc	Protospacer
 *.*** * ** ******** ***********

33. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcaggtgcctgatgcgacgctggcgcgtcttatca	Protospacer
 . ...*****************************

34. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatca	Protospacer
 ...*.****************.************

35. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctagcgcgtcttatca	Protospacer
 . .*.***************.*************

36. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gccgatgcctgatgcgacgctgacgcgttttatca	Protospacer
 .*.*.****************.*****.******

37. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcaggtgcctgatgcgacgctggcgcgtcttatca	Protospacer
 . ...*****************************

38. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatca	Protospacer
 ...*.****************.************

39. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctagcgcgtcttatca	Protospacer
 . .*.***************.*************

40. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gccgatgcctgatgcgacgctgacgcgttttatca	Protospacer
 .*.*.****************.*****.******

41. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcaggtgcctgatgcgacgctggcgcgtcttatca	Protospacer
 . ...*****************************

42. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatca	Protospacer
 ...*.****************.************

43. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctagcgcgtcttatca	Protospacer
 . .*.***************.*************

44. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gccgatgcctgatgcgacgctgacgcgttttatca	Protospacer
 .*.*.****************.*****.******

45. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcaggtgcctgatgcgacgctggcgcgtcttatca	Protospacer
 . ...*****************************

46. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatca	Protospacer
 ...*.****************.************

47. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctagcgcgtcttatca	Protospacer
 . .*.***************.*************

48. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gccgatgcctgatgcgacgctgacgcgttttatca	Protospacer
 .*.*.****************.*****.******

49. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
ccaggtgcctgatgcgacgctggcgcgtcttatca	Protospacer
.. ...*****************************

50. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatca	Protospacer
 ...*.****************.************

51. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
tgaattacctgatgcgacgctggcgcatcttatca	Protospacer
*  * ..*******************.********

52. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gctgatgtctgatgcgacgctggcgcgtcttatca	Protospacer
 ...*.*.***************************

53. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 6, identity: 0.829 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
cgtaacgtcggatgcgacgctggcgcgtcttatcc	Protospacer
. .****.* ************************

54. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgccagatgcgacgctggcgcgtcttatct	Protospacer
 . .*.*** ************************

55. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gtttatgccagatgcgacgctgacgcgtcttatct	Protospacer
 *. *.*** ************.***********

56. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
acggatgcccgatgcgacgctggcgcgtcttatcg	Protospacer
 . .*.***.************************.

57. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . .*.***************..************

58. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . .*.***************..************

59. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . .*.***************..************

60. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . .*.***************..************

61. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . .*.***************..************

62. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . .*.***************..************

63. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . .*.***************..************

64. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . .*.***************..************

65. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatacgacgctgacgcgtcttatca	Protospacer
 . .*.*******.********.************

66. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatacgacgctgacgcgtcttatca	Protospacer
 . .*.*******.********.************

67. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . .*.***************..************

68. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . .*.***************..************

69. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . .*.***************..************

70. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . .*.***************..************

71. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . .*.***************..************

72. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . .*.***************..************

73. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . .*.***************..************

74. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . .*.***************..************

75. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 7, identity: 0.8 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
acggatgctcgatgcgacgctggcgcgtcttatca	Protospacer
 . .*.**..*************************

76. spacer 1.3|982506|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758 

gacgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
tccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
  *******.**************** *.. *.

77. spacer 2.1|1008329|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75 

-ctttcgcagacgcgcggcgatacgctcacgca	CRISPR spacer
ggcttcacgaa-gcgcggcgatacgctctcgct	Protospacer
  .***.*..* **************** ***

78. spacer 2.2|1008390|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to MN855762 (Bacteriophage sp. isolate 505, complete genome) position: , mismatch: 8, identity: 0.75 

cagccgaagccaaaggtgatgccgaacacgct	CRISPR spacer
aagccgaagccaaaggtgatttcgagctggtc	Protospacer
 ******************* .***.*  *..

79. spacer 2.2|1008390|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 8, identity: 0.75 

cagccgaagccaaaggtgatgc---cgaacacgct	CRISPR spacer
tagcagaagccgaaggtgatgccggcgagcag---	Protospacer
.*** ******.**********   ***.**

80. spacer 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 8, identity: 0.758 

cgaatcgcgcataccctgcgcgtcgccgcctgc	CRISPR spacer
ctgatcgcgcattacctgcgcgtcgccgacgcg	Protospacer
* .*********  ************** *

81. spacer 2.8|1008758|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to MK113951 (Phage 5P_3, complete genome) position: , mismatch: 8, identity: 0.75 

ctgctggagctggctgcaaggcaagccgccca	CRISPR spacer
gagcatcggctggctgcaaggcaagctgcccc	Protospacer
  **   .******************.****

82. spacer 2.8|1008758|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to AP017924 (Ralstonia phage RP12 DNA, complete genome) position: , mismatch: 8, identity: 0.75 

ctgctggagctggctgcaaggcaagccgccca	CRISPR spacer
gcggaagcgctggctgcacggcaagcggccca	Protospacer
 .*  .* ********** ******* *****

83. spacer 2.12|1009002|32|CP028704|CRISPRCasFinder,CRT matches to NZ_AP018516 (Acetobacter orientalis strain FAN1 plasmid pAOF1, complete sequence) position: , mismatch: 8, identity: 0.75 

gcaacgacggtgagatttcacgcctgacgctg	CRISPR spacer
tcaacgacggtaagatgtcacgcctaaagaat	Protospacer
 **********.**** ********.* *

84. spacer 2.1|1008329|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to MN234174 (Mycobacterium phage Efra2, complete genome) position: , mismatch: 9, identity: 0.719 

ctttcgcagacgcgcggcgatacgctcacgca	CRISPR spacer
gatcaccagacgcgcggcgtcacgctcacggc	Protospacer
  *.  ************* .*********

85. spacer 2.1|1008329|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to MN234165 (Mycobacterium phage Yunkel11, complete genome) position: , mismatch: 9, identity: 0.719 

ctttcgcagacgcgcggcgatacgctcacgca	CRISPR spacer
gatcaccagacgcgcggcgtcacgctcacggc	Protospacer
  *.  ************* .*********

86. spacer 2.1|1008329|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to MN234201 (Mycobacterium phage Guanica15, complete genome) position: , mismatch: 9, identity: 0.719 

ctttcgcagacgcgcggcgatacgctcacgca	CRISPR spacer
gatcaccagacgcgcggcgtcacgctcacggc	Protospacer
  *.  ************* .*********

87. spacer 2.2|1008390|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015585 (Roseomonas gilardii strain U14-5 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719 

cagccgaagccaaaggtgatgccgaacacgct	CRISPR spacer
cagctggagccaaaggtgatgcccgtgcggat	Protospacer
****.*.**************** .    * *

88. spacer 2.2|1008390|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054618 (Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719 

cagccgaagccaaaggtgatgccgaacacgct	CRISPR spacer
gcgccgaaggcaaaggtgttgccgaggccgag	Protospacer
  ******* ******** ******.  **

89. spacer 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010957 (Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence) position: , mismatch: 9, identity: 0.727 

cgaatcgcgcataccctgcgcgtcgccgcctgc	CRISPR spacer
ctcgacccgcataccttgcgtgtcgccgcctcg	Protospacer
*  . * ********.****.**********

90. spacer 9.1|3715545|35|CP028704|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 9, identity: 0.743 

ttcaacgcctgatgcgacgctggcgcgtcttatca	CRISPR spacer
gcagatgcctgatgcgatgcttgcgcgtcttctta	Protospacer
 . .*.***********.*** ********* *.*

91. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.824 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
aaacgatttgtaggcctgataagacgcgacagcggcgcatcaggcgctggt	Protospacer
. *  * *************************** **********..**.*

92. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 9, identity: 0.824 

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
tgcagt-tttgtaggcatgataagacgcgccagcgtcgcatcaggcatccgg	Protospacer
 ***.*  ******** ************ ******************. .

93. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 9, identity: 0.824 

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
tgcagt-tttgtaggcatgataagacgcgccagcgtcgcatcaggcatccgg	Protospacer
 ***.*  ******** ************ ******************. .

94. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052797 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N18S2039 plasmid pN18S2039, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

95. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052795 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

96. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047882 (Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

97. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052804 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

98. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP038508 (Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

99. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052802 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

100. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052788 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

101. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052840 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

102. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052786 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

103. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052838 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

104. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028316 (Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain CFSAN067217 plasmid pSC-31-2, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

105. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP051676 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

106. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052783 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0679 plasmid pN19S0679-1, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

107. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052836 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

108. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022063 (Salmonella enterica strain FDAARGOS_312 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

109. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052781 (Salmonella enterica strain CVM N19S0949 plasmid pN19S0949, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

110. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052834 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S041 plasmid pN17S0041, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

111. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052793 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0388 plasmid pN19S0388, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

112. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052779 (Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

113. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052832 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

114. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031362 (Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

115. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052830 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1105 plasmid pN17S1105, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

116. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052828 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

117. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052826 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

118. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016409 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

119. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052824 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1265 plasmid pN17S1265, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

120. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052822 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1349 plasmid pN17S1349, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

121. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016407 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

122. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052820 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1442 plasmid pN17S1442, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

123. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016413 (Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

124. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016411 (Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

125. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052816 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1598 plasmid pN17S1598) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

126. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052814 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

127. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022662 (Salmonella enterica subsp. enterica strain RM11065 plasmid pRM11065-2, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

128. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052812 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S376 plasmid pN17S0376, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

129. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052810 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S535 plasmid pN17S0535, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

130. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052808 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S637 plasmid pN17S0637, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

131. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052806 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

132. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052791 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0552 plasmid pN17S0637, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

133. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052818 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

134. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP052799 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S990 plasmid pN17S0990-1, complete sequence) position: , mismatch: 10, identity: 0.688 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tactccctgtcggttgtgtttgatagcgcctc	Protospacer
 .***************. ******..*..

135. spacer 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to CP046443 (Pseudomonas coronafaciens pv. coronafaciens strain B19001 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.697 

cgaatcgcgcataccctgcgcgtcgccgcctgc	CRISPR spacer
ttcgctgcgcatctcctgcgcgtcgccgccggt	Protospacer
.  ...****** .**************** *.

136. spacer 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT963392 (Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP1, complete sequence) position: , mismatch: 10, identity: 0.697 

cgaatcgcgcataccctgcgcgtcgccgcctgc	CRISPR spacer
ttcgctgcgcatctcctgcgcgtcgccgccggt	Protospacer
.  ...****** .**************** *.

137. spacer 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT963392 (Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP1, complete sequence) position: , mismatch: 10, identity: 0.697 

cgaatcgcgcataccctgcgcgtcgccgcctgc	CRISPR spacer
ttcgctgcgcatctcctgcgcgtcgccgccggt	Protospacer
.  ...****** .**************** *.

138. spacer 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034079 (Pseudomonas syringae pv. pisi str. PP1 plasmid pPP1-1, complete sequence) position: , mismatch: 10, identity: 0.697 

cgaatcgcgcataccctgcgcgtcgccgcctgc	CRISPR spacer
ttcgctgcgcatctcctgcgcgtcgccgccggt	Protospacer
.  ...****** .**************** *.

139. spacer 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034080 (Pseudomonas syringae pv. pisi str. PP1 plasmid pPP1-2, complete sequence) position: , mismatch: 10, identity: 0.697 

cgaatcgcgcataccctgcgcgtcgccgcctgc	CRISPR spacer
ttcgctgcgcatctcctgcgcgtcgccgccggt	Protospacer
.  ...****** .**************** *.

140. spacer 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NC_005918 (Pseudomonas syringae pv. maculicola strain ES4326 plasmid pPMA4326A, complete sequence) position: , mismatch: 10, identity: 0.697 

cgaatcgcgcataccctgcgcgtcgccgcctgc	CRISPR spacer
ttcgctgcgcatctcctgcgcgtcgccgccggt	Protospacer
.  ...****** .**************** *.

141. spacer 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047262 (Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326A, complete sequence) position: , mismatch: 10, identity: 0.697 

cgaatcgcgcataccctgcgcgtcgccgcctgc	CRISPR spacer
ttcgctgcgcatctcctgcgcgtcgccgccggt	Protospacer
.  ...****** .**************** *.

142. spacer 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026560 (Pseudomonas amygdali pv. morsprunorum strain R15244 plasmid p3_tig5, complete sequence) position: , mismatch: 10, identity: 0.697 

cgaatcgcgcataccctgcgcgtcgccgcctgc	CRISPR spacer
ttcgctgcgcatctcctgcgcgtcgccgccggt	Protospacer
.  ...****** .**************** *.

143. spacer 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT963406 (Pseudomonas syringae pv. avii isolate CFBP3846 plasmid PP4, complete sequence) position: , mismatch: 10, identity: 0.697 

cgaatcgcgcataccctgcgcgtcgccgcctgc	CRISPR spacer
ttcgctgcgcatctcctgcgcgtcgccgccggt	Protospacer
.  ...****** .**************** *.

144. spacer 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to LT985193 (Pseudomonas syringae strain CFBP 2116 genome assembly, plasmid: PP2) position: , mismatch: 10, identity: 0.697 

cgaatcgcgcataccctgcgcgtcgccgcctgc	CRISPR spacer
ttcgctgcgcatctcctgcgcgtcgccgccggt	Protospacer
.  ...****** .**************** *.

145. spacer 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT963393 (Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP2, complete sequence) position: , mismatch: 10, identity: 0.697 

cgaatcgcgcataccctgcgcgtcgccgcctgc	CRISPR spacer
ttcgctgcgcatctcctgcgcgtcgccgccggt	Protospacer
.  ...****** .**************** *.

146. spacer 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT985210 (Pseudomonas syringae pv. cerasicola strain CFBP 6110 plasmid PP1, complete sequence) position: , mismatch: 10, identity: 0.697 

cgaatcgcgcataccctgcgcgtcgccgcctgc	CRISPR spacer
ttcgctgcgcatctcctgcgcgtcgccgccggt	Protospacer
.  ...****** .**************** *.

147. spacer 2.5|1008574|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT985211 (Pseudomonas syringae pv. cerasicola strain CFBP 6110 plasmid PP2, complete sequence) position: , mismatch: 10, identity: 0.697 

cgaatcgcgcataccctgcgcgtcgccgcctgc	CRISPR spacer
ttcgctgcgcatctcctgcgcgtcgccgccggt	Protospacer
.  ...****** .**************** *.

148. spacer 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028970 (Aminobacter sp. MSH1 plasmid pUSP2, complete sequence) position: , mismatch: 10, identity: 0.688 

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
acgtcaccccggaagcgattgccagcacacgc	Protospacer
.  ********.*** **********  .* .

149. spacer 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053984 (Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

150. spacer 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NC_010935 (Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence) position: , mismatch: 10, identity: 0.688 

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

151. spacer 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to JX469826 (Uncultured bacterium plasmid pB12, complete sequence) position: , mismatch: 10, identity: 0.688 

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

152. spacer 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to JN106171 (Uncultured bacterium plasmid pAKD26, complete sequence) position: , mismatch: 10, identity: 0.688 

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

153. spacer 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NC_016968 (Comamonas testosteroni plasmid pTB30, complete sequence) position: , mismatch: 10, identity: 0.688 

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

154. spacer 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NC_016978 (Comamonas testosteroni plasmid pI2, complete sequence) position: , mismatch: 10, identity: 0.688 

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

155. spacer 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017760 (Cupriavidus necator strain NH9 plasmid pENH91, complete sequence) position: , mismatch: 10, identity: 0.688 

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

156. spacer 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053554 (Diaphorobacter sp. JS3050 plasmid pDCNB, complete sequence) position: , mismatch: 10, identity: 0.688 

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

157. spacer 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NC_019263 (Delftia acidovorans plasmid pLME1, complete sequence) position: , mismatch: 10, identity: 0.688 

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

158. spacer 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NC_019264 (Delftia acidovorans plasmid pNB8c, complete sequence) position: , mismatch: 10, identity: 0.688 

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

159. spacer 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NC_019283 (Delftia acidovorans plasmid pC1-1, complete sequence) position: , mismatch: 10, identity: 0.688 

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

160. spacer 2.7|1008697|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NC_006830 (Achromobacter xylosoxidans A8 plasmid pA81, complete sequence) position: , mismatch: 10, identity: 0.688 

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

161. spacer 2.8|1008758|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NC_002580 (Propionibacterium freudenreichii plasmid p545, complete sequence) position: , mismatch: 10, identity: 0.688 

ctgctggagctggctgcaaggcaagccgccca	CRISPR spacer
ccctgagagctggctgccacgcaagccgctgg	Protospacer
*. . .*********** * *********. .

162. spacer 8.1|3442047|59|CP028704|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 10, identity: 0.831 

-cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc	CRISPR spacer
tcagtgcac-gatcgccggatgcggcgtgaacgccttatccgtcctacggttctgtgctc	Protospacer
 *.* ****  **.**************************** ************   .*

163. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.804 

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cacaa-gtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 .*** . ******** ************ ******************. ..

164. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.804 

--gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
aaacagtgg--gtaggcctgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
  .**.*.*  ******************* ******************. .

165. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.804 

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cacaa-gtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 .*** . ******** ************ ******************. ..

166. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.804 

--gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
aaacagtgg--gtaggcctgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
  .**.*.*  ******************* ******************. .

167. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.804 

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cacaa-gtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 .*** . ******** ************ ******************. ..

168. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.804 

--gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
aaacagtgg--gtaggcctgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
  .**.*.*  ******************* ******************. .

169. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.804 

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cacaa-gtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 .*** . ******** ************ ******************. ..

170. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.804 

--gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
aaacagtgg--gtaggcctgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
  .**.*.*  ******************* ******************. .

171. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 10, identity: 0.804 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
gggcgactcgtaggcctgataagacgcgccagcgtcgcatcaggcaccgaa	Protospacer
* .  * *.******************* *****************..**

172. spacer 1.2|982445|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667 

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctccccaagtgccg	Protospacer
  *******.************ ***.   ..

173. spacer 1.2|982445|33|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667 

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctctccaagtgccg	Protospacer
  *******.************ ***.   ..

174. spacer 2.3|1008451|32|CP028704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026128 (Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence) position: , mismatch: 11, identity: 0.656 

ggctccctgtcggttgtaattgataatgttga	CRISPR spacer
tttgaactgtcggttgtaattggcaatgtatc	Protospacer
  .   ****************..*****

175. spacer 8.1|3442047|59|CP028704|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.814 

cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc-	CRISPR spacer
ggtacggctttttgccggatgcggcgtaaacgccttatccggcctacggtt-tggtgcga	Protospacer
 * *  .*** ****************.*********************** ***..*

176. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.784 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
attgattttgtaggcctgataagacgcggcagcgtcgcatcaggcatcgtg	Protospacer
.. .   *********************.******************.*

177. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.784 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgagaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  *. * ********************* .*****************. ..

178. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.784 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
tacagatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
   * * ******** ************ ******************....

179. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.784 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgagaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  *. * ********************* .*****************. ..

180. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.784 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
tacagatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
   * * ******** ************ ******************....

181. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 11, identity: 0.784 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
tacagatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
   * * ******** ************ ******************....

182. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.784 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgagaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  *. * ********************* .*****************. ..

183. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.784 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
tacagatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
   * * ******** ************ ******************....

184. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.784 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgagaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  *. * ********************* .*****************. ..

185. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.784 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
tacagatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
   * * ******** ************ ******************....

186. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 11, identity: 0.784 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
tcgggtctngtaggcctgataagacgcgtcagcgtcgcatcaggcttcaat	Protospacer
 *..   * ******************* **************** *..**

187. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 12, identity: 0.765 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
gtgcagattgtaggcatgataagacgcgtcagcgtcgcatcaggcatcaga	Protospacer
*..  ..******** ************ ******************...

188. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.765 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  .. * ********************* .*****************. ..

189. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.765 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  .. * ********************* .*****************. ..

190. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.765 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  .. * ********************* .*****************. ..

191. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.765 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  .. * ********************* .*****************. ..

192. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.765 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  .. * ********************* .*****************. ..

193. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.765 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  .. * ********************* .*****************. ..

194. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.765 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  .. * ********************* .*****************. ..

195. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.765 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  .. * ********************* .*****************. ..

196. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 13, identity: 0.745 

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgcgg-gctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 **.. . *.****** ************ *****************.. ..

197. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 13, identity: 0.745 

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgcgg-gctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 **.. . *.****** ************ *****************.. ..

198. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 13, identity: 0.745 

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgcgg-gctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgg	Protospacer
 **.. . *.****** ************ *****************.. .

199. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 13, identity: 0.745 

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgcgg-gctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 **.. . *.****** ************ *****************.. ..

200. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 13, identity: 0.745 

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgcgg-gctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 **.. . *.****** ************ *****************.. ..

201. spacer 10.1|4329044|51|CP028704|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 13, identity: 0.745 

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
ttcaggtccgtaggcatgataagacgcgtcagcgtcgcatcaggcatcggc	Protospacer
 . * . ..****** ************ ******************.*..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1022531 : 1029670 6 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_2 1403534 : 1416005 16 Enterobacteria_phage(50.0%) integrase,transposase,tail attL 1399844:1399860|attR 1418015:1418031
DBSCAN-SWA_3 1665249 : 1674690 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_4 2235609 : 2254819 33 Enterobacteria_phage(42.86%) tail,lysis NA
DBSCAN-SWA_5 2448156 : 2478486 38 Escherichia_phage(39.29%) integrase,tRNA,transposase,tail attL 2445869:2445883|attR 2477647:2477661
DBSCAN-SWA_6 3244047 : 3288410 54 Enterobacteria_phage(57.69%) terminase,capsid,lysis,integrase,protease,transposase attL 3237972:3237986|attR 3293069:3293083

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage