CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP029477	Lactobacillus kullabergensis strain ESL0186 chromosome, complete genome	1 crisprs	cas1,cas2,csn2,DEDDh,cas3,DinG,csa3,cas9	0	25	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP029477_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029477_2

326400-328349

TypeII

Consensus_repeat	Method
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	PILER-CR
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CRISPRCasFinder
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CRT

29 spacers

csn2,cas2,cas1,cas9,DEDDh

The CRISPR arrays of CP029477_2

>merge|CP029477|2|326400-328349|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAACCTGTCAACGACCCAGACGAAATAGGCAATCGTTTTAGATGATTGTTAGATCAATGATGATTAGAACCTGTTAAATTCAAAATTGGCTTTAGAAACTGTTTTAGATGATTGTTAGATCAATGATGATTAGAACCAAAATGATGCTGCTTTGGATACACAAATAGTTTTAGATGATTGTTAGATCAATGATGATTAGAACCACCAATGATATTTTTTAACGATGAACTCAGTTTTAGATGATTGTTAGATCAATGATGATTAGAACCGTGGTAGTCTTCCAAGAATTATAATCAGCGTTTTAGATGATTGTTAGATCAATGATGATTAGAACTGGCTCAATTGAGGCTAAGGAAAAGTTAGAGTTTTAGATGATTGTTAGATCAATGATGATTAGAACTAGCCTCTGCAAACTGCGTATACAGGTATTGTTTTAGATGATTGTTAGATCAATGATGATTAGAACGAGGCTTGTATTATAGCGCTAGAAAGTGGGGTTTTAGATGATTGTTAGATCAATGATGATTAGAACTAAAAGATTTTTTGAATGGATATTCTAAAAGTTTTAGATGATTGTTAGATCAATGATGATTAGAACTGCTGTTTTGCTTTGTGAGAACTTAGTCCTGTTTTAGATGATTGTTAGATCAATGATGATTAGAACATATTAGCAAGTGTGAATACCTCACACCTAGTTTTAGATGATTGTTAGATCAATGATGATTAGAACAGAAAGTGTTTAAAAATAAAATGTTAAGTTGTTTTAGATGATTGTTAGATCAATGATGATTAGAACTAGAAAACGCAAAGGCGTGGATTAAGTTTTGTTTTAGATGATTGTTAGATCAATGATGATTAGAACATTTTTAGGAGGCTTTAAAATGCAAGTTAAGTTTTAGATGATTGTTAGATCAATGATGATTAGAACATTCATGCACCCAATAATACTTGGCTGTGTGTTTTAGATGATTGTTAGATCAATGATGATTAGAACTGGCGTTACGTATTTTGAAATTAGCCCTAGGTTTTAGATGATTGTTAGATCAATGATGATTAGAACCAAGGTTGTCAGTCGGCTGTTAGATCAGCTGTTTTAGATGATTGTTAGATCAATGATGATTAGAACAATTAGCTTTTTATTTTTAATATAGCCGTAGTTTTAGATGATTGTTAGATCAATGATGATTAGAACCGTTATTTGATTTTTTACAGTGGGGTATATGTTTTAGATGATTGTTAGATCAATGATGATTAGAACATGGAAGCTGGCAGAGCCAGCTGTAACGGCGTTTTAGATGATTGTTAGATCAATGATGATTAGAACATATAATAGACTTGTTAAAAGATAAGAGTTGTTTTAGATGATTGTTAGATCAATGATGATTAGAACTGTAAAAGGGACACAAAAGGGACAAATATAGTTTTAGATGATTGTTAGATCAATGATGATTAGAACAGAAAGTGTTTAAAAATAAAATGTTAAGTTGTTTTAGATGATTGTTAGATCAATGATGATTAGAACCGTTATTTGATTTTTTACAGTGGGGTATATGTTTTAGATGATTGTTAGATCAATGATGATTAGAACAATTAAGTTAGGAGAACGATATGAAGCGTAGTTTTAGATGATTGTTAGATCAATGATGATTAGAACAAGAACACATAGTATTAGTAAAGGGTGTTGGTTTTAGATGATTGTTAGATCAATGATGATTAGAACTGATGAATCTCTTGACCCACAGTCAAGCGCGTTTTAGATGTTTGTTAGATCAATGATGATTAGAACCAACAAAAATGCAAGCTAAAAAATGGGCTAGTTTTAGATGATTGTTAGATCAATGATGATTAGAACAGGATATGCAACAGACTTTGCCAGAAAGACGTTTTAGATGATTGTTGGATCAACGATAATTAAAGC

>CP029477|2|1|326400-328283|PILER-CR
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CTGTCAACGACCCAGACGAAATAGGCAATC
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CTGTTAAATTCAAAATTGGCTTTAGAAACT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CAAAATGATGCTGCTTTGGATACACAAATA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CACCAATGATATTTTTTAACGATGAACTCA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CGTGGTAGTCTTCCAAGAATTATAATCAGC
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TGGCTCAATTGAGGCTAAGGAAAAGTTAGA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TAGCCTCTGCAAACTGCGTATACAGGTATT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	GAGGCTTGTATTATAGCGCTAGAAAGTGGG
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TAAAAGATTTTTTGAATGGATATTCTAAAA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TGCTGTTTTGCTTTGTGAGAACTTAGTCCT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	ATATTAGCAAGTGTGAATACCTCACACCTA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	AGAAAGTGTTTAAAAATAAAATGTTAAGTT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TAGAAAACGCAAAGGCGTGGATTAAGTTTT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	ATTTTTAGGAGGCTTTAAAATGCAAGTTAA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	ATTCATGCACCCAATAATACTTGGCTGTGT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TGGCGTTACGTATTTTGAAATTAGCCCTAG
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CAAGGTTGTCAGTCGGCTGTTAGATCAGCT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	AATTAGCTTTTTATTTTTAATATAGCCGTA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CGTTATTTGATTTTTTACAGTGGGGTATAT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	ATGGAAGCTGGCAGAGCCAGCTGTAACGGC
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	ATATAATAGACTTGTTAAAAGATAAGAGTT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TGTAAAAGGGACACAAAAGGGACAAATATA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	AGAAAGTGTTTAAAAATAAAATGTTAAGTT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CGTTATTTGATTTTTTACAGTGGGGTATAT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	AATTAAGTTAGGAGAACGATATGAAGCGTA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	AAGAACACATAGTATTAGTAAAGGGTGTTG
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TGATGAATCTCTTGACCCACAGTCAAGCGC
GTTTTAGATGTTTGTTAGATCAATGATGATTAGAAC	CAACAAAAATGCAAGCTAAAAAATGGGCTA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC

>CP029477|2|2|326400-328349|CRISPRCasFinder
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CTGTCAACGACCCAGACGAAATAGGCAATC
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CTGTTAAATTCAAAATTGGCTTTAGAAACT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CAAAATGATGCTGCTTTGGATACACAAATA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CACCAATGATATTTTTTAACGATGAACTCA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CGTGGTAGTCTTCCAAGAATTATAATCAGC
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TGGCTCAATTGAGGCTAAGGAAAAGTTAGA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TAGCCTCTGCAAACTGCGTATACAGGTATT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	GAGGCTTGTATTATAGCGCTAGAAAGTGGG
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TAAAAGATTTTTTGAATGGATATTCTAAAA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TGCTGTTTTGCTTTGTGAGAACTTAGTCCT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	ATATTAGCAAGTGTGAATACCTCACACCTA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	AGAAAGTGTTTAAAAATAAAATGTTAAGTT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TAGAAAACGCAAAGGCGTGGATTAAGTTTT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	ATTTTTAGGAGGCTTTAAAATGCAAGTTAA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	ATTCATGCACCCAATAATACTTGGCTGTGT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TGGCGTTACGTATTTTGAAATTAGCCCTAG
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CAAGGTTGTCAGTCGGCTGTTAGATCAGCT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	AATTAGCTTTTTATTTTTAATATAGCCGTA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CGTTATTTGATTTTTTACAGTGGGGTATAT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	ATGGAAGCTGGCAGAGCCAGCTGTAACGGC
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	ATATAATAGACTTGTTAAAAGATAAGAGTT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TGTAAAAGGGACACAAAAGGGACAAATATA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	AGAAAGTGTTTAAAAATAAAATGTTAAGTT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CGTTATTTGATTTTTTACAGTGGGGTATAT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	AATTAAGTTAGGAGAACGATATGAAGCGTA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	AAGAACACATAGTATTAGTAAAGGGTGTTG
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TGATGAATCTCTTGACCCACAGTCAAGCGC
GTTTTAGATGTTTGTTAGATCAATGATGATTAGAAC	CAACAAAAATGCAAGCTAAAAAATGGGCTA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	AGGATATGCAACAGACTTTGCCAGAAAGAC
GTTTTAGATGATTGTTGGATCAACGATAATTAAAGC

>CP029477|2|1|326400-328349|CRT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CTGTCAACGACCCAGACGAAATAGGCAATC
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CTGTTAAATTCAAAATTGGCTTTAGAAACT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CAAAATGATGCTGCTTTGGATACACAAATA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CACCAATGATATTTTTTAACGATGAACTCA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CGTGGTAGTCTTCCAAGAATTATAATCAGC
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TGGCTCAATTGAGGCTAAGGAAAAGTTAGA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TAGCCTCTGCAAACTGCGTATACAGGTATT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	GAGGCTTGTATTATAGCGCTAGAAAGTGGG
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TAAAAGATTTTTTGAATGGATATTCTAAAA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TGCTGTTTTGCTTTGTGAGAACTTAGTCCT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	ATATTAGCAAGTGTGAATACCTCACACCTA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	AGAAAGTGTTTAAAAATAAAATGTTAAGTT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TAGAAAACGCAAAGGCGTGGATTAAGTTTT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	ATTTTTAGGAGGCTTTAAAATGCAAGTTAA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	ATTCATGCACCCAATAATACTTGGCTGTGT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TGGCGTTACGTATTTTGAAATTAGCCCTAG
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CAAGGTTGTCAGTCGGCTGTTAGATCAGCT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	AATTAGCTTTTTATTTTTAATATAGCCGTA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CGTTATTTGATTTTTTACAGTGGGGTATAT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	ATGGAAGCTGGCAGAGCCAGCTGTAACGGC
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	ATATAATAGACTTGTTAAAAGATAAGAGTT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TGTAAAAGGGACACAAAAGGGACAAATATA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	AGAAAGTGTTTAAAAATAAAATGTTAAGTT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	CGTTATTTGATTTTTTACAGTGGGGTATAT
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	AATTAAGTTAGGAGAACGATATGAAGCGTA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	AAGAACACATAGTATTAGTAAAGGGTGTTG
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	TGATGAATCTCTTGACCCACAGTCAAGCGC
GTTTTAGATGTTTGTTAGATCAATGATGATTAGAAC	CAACAAAAATGCAAGCTAAAAAATGGGCTA
GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC	AGGATATGCAACAGACTTTGCCAGAAAGAC
GTTTTAGATGATTGTTGGATCAACGATAATTAAAGC

Protein	Signature genes	Signature genes Name	Protein_function
CP029477.1\|AWM74763.1\|317936_318878_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381318
CP029477.1\|AWM74767.1\|325396_325702_+\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
CP029477.1\|AWM74765.1\|320102_324284_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|374653
CP029477.1\|AWM74770.1\|331142_332390_-\|family-2-glycosyl-transferase	unknown	unknown	gnl\|CDD\|133058
CP029477.1\|AWM74759.1\|313842_314640_+\|PTS-sugar-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|377077
CP029477.1\|AWM74772.1\|334235_334685_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378693
CP029477.1\|AWM74773.1\|334692_335334_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225205
CP029477.1\|AWM74760.1\|314636_315470_+\|PTS-mannose-transporter-subunit-IID	unknown	unknown	gnl\|CDD\|377079
CP029477.1\|AWM74762.1\|316550_317822_+\|RNA-polymerase-sigma-54-factor	unknown	unknown	gnl\|CDD\|274109
CP029477.1\|AWM74776.1\|337234_338107_+\|DNA-nuclease	unknown	unknown	gnl\|CDD\|372824
CP029477.1\|AWM74766.1\|324507_325419_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
CP029477.1\|AWM74777.1\|338434_339520_+\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
CP029477.1\|AWM74775.1\|336178_337132_+\|DNA-polymerase-III-subunit-epsilon	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|176648
CP029477.1\|AWM74774.1\|335347_336169_+\|Sir2-family-NAD-dependent-protein-deacetylase	unknown	unknown	unknown
CP029477.1\|AWM74771.1\|332824_333739_-\|prolyl-aminopeptidase	unknown	unknown	gnl\|CDD\|188121
CP029477.1\|AWM76221.1\|329920_331006_+\|hypothetical-protein	unknown	unknown	unknown
CP029477.1\|AWM74769.1\|328442_329684_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
CP029477.1\|AWM74764.1\|319063_319972_+\|L-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|133427
CP029477.1\|AWM74761.1\|315501_316272_+\|aldolase	unknown	unknown	gnl\|CDD\|180541
CP029477.1\|AWM74768.1\|325698_326367_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd12218_csn2_CAS-II-A	gnl\|CDD\|213411

Protein	Function_ID	Function_description	E-value
CP029477.1\|AWM74763.1\|317936_318878_-\|aldo/keto-reductase	gnl\|CDD\|381318	cd19092, AKR_BsYcsN_EcYdhF-like, Bacillus subtilis YcsN, Escherichia coli YdhF and similar proteins. Bacillus subtilis YcsN and Escherichia coli YdhF are prototypes of this family. They are uncharacterized aldo/keto reductase family oxidoreductases.	2.90877e-130
CP029477.1\|AWM74767.1\|325396_325702_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	5.2981e-26
CP029477.1\|AWM74765.1\|320102_324284_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	1.02921e-123
CP029477.1\|AWM74770.1\|331142_332390_-\|family-2-glycosyl-transferase	gnl\|CDD\|133058	cd06436, GlcNAc-1-P_transferase, N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.	1.01748e-38
CP029477.1\|AWM74759.1\|313842_314640_+\|PTS-sugar-transporter-subunit-IIC	gnl\|CDD\|377077	pfam03609, EII-Sor, PTS system sorbose-specific iic component.	1.99817e-66
CP029477.1\|AWM74772.1\|334235_334685_+\|hypothetical-protein	gnl\|CDD\|378693	pfam11694, DUF3290, Protein of unknown function (DUF3290). This family of proteins with unknown function appears to be restricted to Firmicutes.	1.30749e-51
CP029477.1\|AWM74773.1\|334692_335334_+\|hypothetical-protein	gnl\|CDD\|225205	COG2323, COG2323, Predicted membrane protein [Function unknown].	2.3838e-59
CP029477.1\|AWM74760.1\|314636_315470_+\|PTS-mannose-transporter-subunit-IID	gnl\|CDD\|377079	pfam03613, EIID-AGA, PTS system mannose/fructose/sorbose family IID component.	1.51841e-92
CP029477.1\|AWM74762.1\|316550_317822_+\|RNA-polymerase-sigma-54-factor	gnl\|CDD\|274109	TIGR02395, RNA_polymerase_sigma-54_factor, RNA polymerase sigma-54 factor. A sigma factor is a DNA-binding protein protein that binds to the DNA-directed RNA polymerase core to produce the holoenzyme capable of initiating transcription at specific sites. Different sigma factors act in vegetative growth, heat shock, extracytoplasmic functions (ECF), etc. This model represents the clade of sigma factors called sigma-54, or RpoN (unrelated to sigma 70-type factors such as RpoD/SigA). RpoN is responsible for enhancer-dependent transcription, and its presence characteristically is associated with varied panels of activators, most of which are enhancer-binding proteins (but see Brahmachary, et al., ). RpoN may be responsible for transcription of nitrogen fixation genes, flagellins, pilins, etc., and synonyms for the gene symbol rpoN, such as ntrA, reflect these observations [Transcription, Transcription factors].	6.33252e-86
CP029477.1\|AWM74776.1\|337234_338107_+\|DNA-nuclease	gnl\|CDD\|372824	pfam13930, Endonuclea_NS_2, DNA/RNA non-specific endonuclease.	5.3577e-14
CP029477.1\|AWM74766.1\|324507_325419_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	9.01902e-103
CP029477.1\|AWM74777.1\|338434_339520_+\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	6.33671e-123
CP029477.1\|AWM74775.1\|336178_337132_+\|DNA-polymerase-III-subunit-epsilon	gnl\|CDD\|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	3.44646e-40
CP029477.1\|AWM74771.1\|332824_333739_-\|prolyl-aminopeptidase	gnl\|CDD\|188121	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase.	3.32857e-154
CP029477.1\|AWM74769.1\|328442_329684_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.60903e-43
CP029477.1\|AWM74764.1\|319063_319972_+\|L-lactate-dehydrogenase	gnl\|CDD\|133427	cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	5.73744e-141
CP029477.1\|AWM74761.1\|315501_316272_+\|aldolase	gnl\|CDD\|180541	PRK06357, PRK06357, hypothetical protein; Provisional.	5.1302e-100
CP029477.1\|AWM74768.1\|325698_326367_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213411	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	4.47175e-69

>CP029477.1|AWM74768.1|325698_326367_+|type-II-A-CRISPR-associated-protein-Csn2
MILTYATHKKWVFKDPGIKVIGLQSSIAYRDIIQGFQGKNKLLICSEDDYSPLDVSKTFDFIGDPMLSGDITKKYMPHIVSSYLKNLDEENRNKVIKSFYNLESTLQDSLLLEDLPLAINFDEDLKKLLKFTEIHLDKSMLLTPYGIIETVLKIHQTCNLKSVPVICNVAHYLEEREWQELASLVTEMNLILVVIEFTTKENLAISKDIPFYYIDKDLIDWY
>CP029477.1|AWM74767.1|325396_325702_+|CRISPR-associated-endonuclease-Cas2
MRLMIMFDLPTETAEERKEYRQFHKKLINEGFLMIQFSVYVRVCVTRQTAKFLENRIRKFLPHGGLVQSLMVTEKQYNDMHFLVGKPIDDVRNTSDRTIIL
>CP029477.1|AWM74766.1|324507_325419_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRSVIITQHAKLTYSMQMMIVQTRDGVNQIPIEDINLLLVSTTQAVITSALISKLAQNQTKVIFVDEKDNPVVETAVYYPGARNMAKLKKQFNWDEHLKEVLWTKIVSQKIKNQIAVLDNYHLNKDEVQSELDQLEINDESNREAIAARKYFMLLFDKDFVRRDTNAINAALDYGYAILLSSFNREIAMNGYLTYFGIHHCSQENQFNLASDLMEPFRPFVDYWVKAHEKIKELTPDIKYGLVELLSLEIKFNDKKTLLTNAITVYVRECLKFLSGDSKELPEMEMSLNNEVPNNALNDNV
>CP029477.1|AWM74765.1|320102_324284_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKRVNEDYILGLDIGTNSCGWAVTDKKNNLLKLRGKTAIGSHLFEEGHTAADRRGFRTTRRRLKRRKWRLRLLEEIFAEPMAKVEPGFFVRLHQSWVSPLDKDRKKYHAIVFPTAKEDQAFYQKYPTIYHLRDALMKEDRQFDLREIFLAIHHIVKYRGNFLQDTPVKDFEASKIEVGPILTNINNAFAEKIVEDQDPIELNVANAAEIEAVIRGKDADKTLYKMDKVKKIAKLLTDSTAKEEKNVAKQIANAVMGYKTQFETILGKEIDKSDKAQWEFKLSDADADDKLDALLPDLDESDQTVVAEIEKLFSAITLSTIVDENKSLSQSMVEKYNKHHQDYKLLKAYIDTLQDRSIAKKLLLAYDLYVNNRHGRLLEAKTEFKQDGALTKEDFYKTVKDNLDDSELARKIAQEIAADNFMPKQRTNSNGVIPFQLHQIELDKIIANQSKYYPFLAIENPVEDHRKQAPYKLDELVRFRVPYYVGPMITADEQEKTSGKNFAWMVRKEDGQITPWNFEQKVDRQESANKFIKRMTIKDTYLLGEDVLPANSLLYQRFEVLNELNNIRINGSRISVDLKQQIFNELFEEKKTVTEKSLTSYLKQNLHLPTVEIKGLADPTKFNSSLASYYHLKSLHVFDKELADPQYQKDFEKIIEYSSIFEDKKIYQDKLHAEFKWLTPEQFKAVSTWRLQGWGRLSRKLLVELHDTNGQNIMEQLWDSQKNFMQIVTEPDFKDAIAKENQNVTQVNGVEEILADAYTSPANKKAIRQVVKVVADVVKAAGGKAPAQFAIEFTRDPDKNPQLSHIRGTKLLKAYQETAGELVDQKLTDSLKEAMTSRKLLKDKYFLYFMQTGRDAYTGKKINIDEVSTNYQIDHILPQSFIKDDSFDNRVLTATPLNAEKSDDVPYKRFANNYVSDLKMTVGEMWKHWQKAGIINKHKLGNLLLDPDRLNKFQKSGFINRQLVETSQIVKLVSVILQNKYPDAEIITVKAGDNSALRQRLNLYKSRDVNDYHHAIDAYLSIICGNFLYQVYPKYRPYFVYGQFKKFSQDPDLQKDLIKRFKGFTFMWPLLQKDNSERKALEEIKENNSDRIVFYKHPDIFDKLRKAYNYKYMLVSRETSTENSNMFKVTIYPRGERELAKTRKLIPKANGLDPKIYGGYSGNTDAYMVIVKIDKGKESIYKVIGIPMRALAGLKQAKKQGNYKKELHKVLAPQIMFDKNGKPKRGVKGYRVVKDHVPFKQVILDGNKKFMLNSSTYEINAKQLTLTKETMRIVTDNLKKGEDQDELLVKAYDEILQKVDQYLPLFEKNNFRNGLHEGKEKFFKLTAKDKKITLSNILNGLHDNLVTPSLKNIGIKTPFGKIQVLPNIILSPNAVLISQSPTGLFEKRVRIANL
>CP029477.1|AWM74764.1|319063_319972_+|L-lactate-dehydrogenase
MSNKIGVIGDGHVGSTVAQQLILTGLVDDLVMIDVNEAKVRADQLDFQDAMANLKHHTTITINDYSTLKDADIVISAFGNIELEAGGERFAELNYNRERIGDIAESIKKSGFNGILVAITNPVDAITNMYQELTGLPRKHVIGTGTLLDTARMKRAVGERMNVDPRSVEGFNLGEHGNSQFTAWSTVKVLEKPITEVAEAKHLKLEDLNDEIKFGGQTVYKGKQYTNYGISAAVTRLVETIQSDAHTEMPVSNYQEKYGTYLSYPAIVGRDGIVQTVELTLTDEEEKKLQASAETIKEKANK
>CP029477.1|AWM74763.1|317936_318878_-|aldo/keto-reductase
MRQIKIGNTNFTGSAIALGIMRMNKLTVEEAVRALETANETGINYIDSADIYGHGKSEEIFGKALQKSSLKRDDFYIQSKTGIYENPELDYKTTRYDFSKKYLINAVDGILSRMKIDYLDSLLLHRPDALMDPAEIAAAFDELQRDGKVRHFGVSNFNPMQVDLLQSGVSQRLLINQLQLSVMHTGPIDFNIHTNMTDERSIDHDRGVLDYSRLHNMTVQAWSPFQYGQIEGNFIGNPKFPEVNEALQKVADQKGVSKNAVAAAWILRHPANTQVIIGTMTPAHIIDSAKGADISLTAQEWYDIYLATGNDLP
>CP029477.1|AWM74762.1|316550_317822_+|RNA-polymerase-sigma-54-factor
MTRLQKMVLKPKEQLVTRLFLSPKLKQNLTVLSYSTHDLINAMKEMSASNPFVTLKEPKGEMQNLEWLRSPEGENLIDHLLLQVDLSDWHTWEKGAVKALIYHLDEDGYLRIDLAKIAEQTEFTLEKLLRAKSLLQSLDPCGIGAANLAECLALQATQKDNFNPVALEILLNNQLEMLADPKKWSNSRFSISELNDALASIQTLNPTPASDYIVDSNVQYLLPDLIYKVTDGRITVENFQAQIPEMVFDEKSYRELKDQSNESKYFSEQKQRFLEMKNAIAERQKTIMRLGKYVGQFQHGFLTTMQKQKLKPLGLKETAQALGLAPSTISRAIKDKYVQCQNKVFSLKILFPRKVTTDLSQARIEYDLQKIIKKEDVRAPLSDQQLVEIFAAHDVTLSRRVIAKYRKKLNIPNSYSRKSKSID
>CP029477.1|AWM74761.1|315501_316272_+|aldolase
MKYPAGRIPFEYERNDLAKVVREVMERRDTNIVGGNISIKVQDEAGKFFYVMTPTMMSEAYMGYLNADQILVIEPHTRKVISGTGKVTREINMHEAIYDANPEIKCVFHSHADQCMFWGTSGLNMPNVTEATQKLKEIRTLNWHPMCTEELAEYVSAEIKKLGAKALRNGFILNSHGTLFTSGGKDMDPLTALHKSLADVDITEYNAKVAYKQTVFQQIGVLDGYYSEGTKIGTWEDVKAGKALYNKKTAQNKKGD
>CP029477.1|AWM74760.1|314636_315470_+|PTS-mannose-transporter-subunit-IID
MSESKHKLNNKDLWKIAWRINFMRLTLNYETLNGVGFMRTIAPALAKIYPNKRDLSEAMNRHRVFYNSHINFDGGILTLAAAMEETTGPDEKDSINALKTGLMGPFAGLGDSLVKMTWTPIVGSIGASLAFAGNVFGPILMFILYNIVNIGGRLYAVFFGYHKGMDFLKNNQHSDAIKRISTMANVVGLMVVGALIATVVKVSTPIKFAVHSTISNKISTGTISLQSMFDKIMPGLLSLAVTVVSYLILKKTNGKHAALLIVIMMALVVVLSYFKIL
>CP029477.1|AWM74759.1|313842_314640_+|PTS-sugar-transporter-subunit-IIC
MKIIAITVLAFFISIDDVSFKLFRRPLLIAPIIGLMLGNLQAGLVIGATLEVMWMGTTNIGAYQAPDIITGTLISTSLAIMGNTNGSIANMVATAITLAVPTSILAQQLLVLIETVNTSLNGWAKRLADNADVKGTNWLVWPPAILNGLARAFPTFLALKFGAGAIQSVVNALPKFIINGLSTSGSIIPAVGIALLMMTMLKKPEMWMFVILGFVLAAYMKLAVLPITLIALVFAFLYERATRKTVVNNTKPDSSSTESQEDYDL
>CP029477.1|AWM74769.1|328442_329684_+|MFS-transporter
MKNILKSKNNKLYLLSVITDNLGSSLMSFALPLMVLDITKNGIHLSIISIIETLPILVLGLPAGALTDKLDVKKILIFGDLIRLISYLVLSVSFAFQLTVNCMILIIYAVSLVVSVTNTINTVSEITFVSFLVEKKDFSELNSLVYGIQYAANFALPIVGGILYQYISHSLLIVICAIFYLISLLLEKSISLKTKSTAFTGFTALKSGLKTVKTDIKEGLEYTLNLRSVLYPLILAALVNIVSANFDNDSLIILRTQLKLSSQNIGIISAIAAVSALIGTLVVNWLNRHIKFNLLLILLIFAGALFRALFALYQNVPTMVLAIAFVSIIESIINISIITNRQQQVGQKYLGRVTSIYKTVLIGVNSLGYLLGGLVAKKIGSRSGIGVSAIELLLVTAISIFLLAPKTKHDNES
>CP029477.1|AWM76221.1|329920_331006_+|hypothetical-protein
MPWSQNGAKTICARYKDPVLRGYSAVIVKDSINREFSENENLITPDRVTTMIVRFPRFILPEWNTHRVFSRNSASSRARSIKTTVKPVMKQPVIPLWTINHKGMTGPFADSERAKRSTANWLHSRDEAVLGMFRQLMNEETVPYDAEASDWEKFADKYDEAYKNDVVPASWNDAHKQDCNRLIEPWMWHETLVTSTYWQNFLDLRIAAGVQPEMEATAILIKAVLEASPKYGTLKKRVLHVPFIEVEENDLLSWESLEPVLLQSASECARISYHDRSTMKNRNGSNLGKRLLAEKHMSPFEHIAWSAKSGDWKKVPALKERMTDLLEKHPDCPPDKITGSLTSNLSESWLQFRRVIENREQ
>CP029477.1|AWM74770.1|331142_332390_-|family-2-glycosyl-transferase
MKLLIAIILFLGGCSFIFDLIWTLYLTFSNNVKQDHYGDRCRDFDTMFLLIPAMNEFQSLRKNIPYLMELQKQCDSFIKLKLVFIDDDSSDGTTTLLQKYAYHPNVIVVHRVKPNAQQGKGPALQEAAERIAKMNYSEDKTIIGVIDADSHFDANYLQQVVYAFNHSNCDLLQTRVNIYNLEHNIAAMQNFEFTIYNSLLQMARTDWGSSLASGNGQFMTLKMTNKVGWSSSLLEDCEFSLKGLLKGYRGTFLNTVSIGQEGVTKYKKLIKQRTRWCQGGFQCLGKYSKKIVKSKSIPSIVKTFVLLFLLIPVFSMVTTPASAISFIVLLLYMKTNAWISISIIAILLIIEYLTNTLLILKQWREAKLDEPLKFSYLLKILFLIDFYRWSLAIVPYKALGRILVGNQSWSKTSHT
>CP029477.1|AWM74771.1|332824_333739_-|prolyl-aminopeptidase
MKTGTKIITLDNGYHLWTNTQGQGKIHLLALHGGPGGNHEYWEDTADQLKKQGLDVQVTMYDQLGSLYSDQPDYSDPEIAKKYLTYEYFLDEVDEVREKLGLDNFYLIGQSWGGLLVQEYAVKYGQHLKGAIISSMVDDIDDYVKAVNRRRQEVLPQTEIDFMHECEDNNDYGNDRYQEDVNILNINFVDRKQPSKLYHLKDIGGSAVYEAFQGDNEFVITGKLKDWHFRDQLKNIKVPTLLTFGENETMPIATAKIMQKEIPNSRLVTTPDGGHHHMVDNPDVYYKHLADFIRQVEAGAFKGE
>CP029477.1|AWM74772.1|334235_334685_+|hypothetical-protein
MTFYTLKYIEQNQNTSKTILYVLIAVAALTMIAFTVLYLRHRFDTRYRDLGIIALLFLLLFMGTQYEKYVQTNVVKSQSEQIAPFIKSVAKDHKVPVSDVMVSSTTLQNGLIVRIDSKDIDYQLELNDDNNSYSLKQAHVINHTVDVKN
>CP029477.1|AWM74773.1|334692_335334_+|hypothetical-protein
MIMNYTQLFIKFVLGVLTLIFQINVFGKSNIAPTTALDQLQNYVLGGIIGGVIYNANISVLQFLLVLIVWTLVVFILKFAREHSNFIRSLIDGKPIQIIKNGQVLPRNCLSAGLSANELMFKLRSQGIYSVDKVKNCIFEKNGQLTVIKKDEKNVRFPLINDGQINQDVLESINKDEDWLKEQVKQAGYDDTSDIFLGEFEDGQVSFTGYNQK
>CP029477.1|AWM74774.1|335347_336169_+|Sir2-family-NAD-dependent-protein-deacetylase
MENLNKARQLVQKADTVIVVAGNGLAKTEGLDLLGQEDFERDFPTIVQKYDVHSVGYALDEHKLSWAEKWQLWSKLIQRYSLDYHPSKTLQKLKQLIDNKQYFIATSAFGHFFETAGFNEKRIFNVFGDWTKAQCSSGINHGLRDCQSVVQKIAGGKPDTNIEELVPKCDVCGQPLEIHMPLNEHFYPDTEANTRFRWFLTGNEDKNTVFLELGVDETSPQLREPIEHLVAEFPQWSYVAADFKQENLLPEIQERSAGTNADTASLINNLVME
>CP029477.1|AWM74775.1|336178_337132_+|DNA-polymerase-III-subunit-epsilon
MSIYVKNGVLHVSGVQDKIRGKGQEWPDFISDYTMLDIETTGLNPYRDHVTELGAVKVRANKVVDEFSQLVVYPRSNHVPSFITKLNGITEELLFKEGKPVKEAMTAFRKFIGYDIIIGYNINFDLNFLYDLARKFHLPELSNDYVDVLRLARVYYPQQHNRLLDCIQRAGIAQVEQHHGLEDSLDTKKVYDDFRQHFTPELLQKAQGKLKNIDLLEEELEVWELGFRNPVNNKKIAFAPEVEINGTEASQMVNNMNGIAQNGVKADTDYLIMSDDGFFSKNNPETLKAREFNHAGSKIKRLSESYFLNMLDEWARS
>CP029477.1|AWM74776.1|337234_338107_+|DNA-nuclease
MARRRSRRKTKTTNGDFWAIVIIILFLLWFVSTKGGSDPSGHQTMNRITRSDRQKSNQIDKAKPAAKVYGGLSHEDYQKLANLNFKSGSSSYITVNNDHSTLIKNAWRVNRVIYSDLDSLNRTSHSNTAFLQKRNVANDSLRVRQFVEPTGWHYNRRNGTQIYNRGHLIAYSVSAGIDFEGNFNPRNHSGDQNNPKNLFTQSAFSNQRIQTMFESRIRVALRQNKKVIYQATPIFRGEELMARGINLQAVSTDGELDFNVYLFNVQPGYSFNYNNGRAKVNHEIFVKDNY
>CP029477.1|AWM74777.1|338434_339520_+|sugar-ABC-transporter-ATP-binding-protein
MDNNKFVEVKNLRKVYDNGHEAIKNVSFSVKKGDLVCLLGPSGCGKTTILNILAGLLNPTEGDILFNGKSVVKVAPKDRHIGYVFQNYALYPHMTVLQNVMFPLIVGANKKPKAEAKKIATKYMELTQITELADQKPGNLSGGQQQRVAIARALVQEPQILLMDEPLSNLDARLRLKIREEIRSLVKSVGITTLFVTHDQEEALSIGDKIILFNDGVIQQDDLGQNFYLEPNNYFVANFVGNPVIDNFKITKTANELKSSQFTIDLADLEESRFKRELPDGEYILSIRPENIVPDPDGLFETTVDDIELIGRERILKFTFDNEQVRSLINLETPIKRGDQVKLKMRFNRVFLFTPEGERVY

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP029477_2	2.2\|326502\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326502-326531	30	MN855697	Bacteriophage sp. isolate 461, complete genome	4420-4449	0	1.0
CP029477_2	2.12\|327162\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327162-327191	30	MN855985	Siphoviridae sp. isolate 349, complete genome	5828-5857	0	1.0
CP029477_2	2.23\|327888\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327888-327917	30	MN855985	Siphoviridae sp. isolate 349, complete genome	5828-5857	0	1.0
CP029477_2	2.27\|328152\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328152-328181	30	MN856033	Myoviridae sp. isolate 312, complete genome	5849-5878	0	1.0
CP029477_2	2.28\|328218\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328218-328247	30	MN856065	Bacteriophage sp. isolate 431, complete genome	1838-1867	0	1.0
CP029477_2	2.12\|327162\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327162-327191	30	MN856056	Myoviridae sp. isolate 80, complete genome	22664-22693	2	0.933
CP029477_2	2.17\|327492\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327492-327521	30	MN856008	Siphoviridae sp. isolate 424, complete genome	20463-20492	2	0.933
CP029477_2	2.22\|327822\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327822-327851	30	MN856043	Siphoviridae sp. isolate 368, complete genome	3509-3538	2	0.933
CP029477_2	2.23\|327888\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327888-327917	30	MN856056	Myoviridae sp. isolate 80, complete genome	22664-22693	2	0.933
CP029477_2	2.19\|327624\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327624-327653	30	MN856069	Bacteriophage sp. isolate 102, complete genome	3154-3183	3	0.9
CP029477_2	2.24\|327954\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327954-327983	30	MN856069	Bacteriophage sp. isolate 102, complete genome	3154-3183	3	0.9
CP029477_2	2.6\|326766\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326766-326795	30	AJ131519	Lactobacillus bacteriophage phi adh complete genome	21463-21492	5	0.833
CP029477_2	2.6\|326766\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326766-326795	30	NC_000896	Lactobacillus prophage phiadh, complete genome	21463-21492	5	0.833
CP029477_2	2.14\|327294\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327294-327323	30	MG945468	UNVERIFIED: Microviridae sp. isolate 268-1801, complete genome	955-984	5	0.833
CP029477_2	2.18\|327558\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327558-327587	30	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	225511-225540	5	0.833
CP029477_2	2.21\|327756\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327756-327785	30	NZ_CP016717	Lactococcus lactis subsp. lactis strain UC063 plasmid pUC063C, complete sequence	10449-10478	5	0.833
CP029477_1	1.1\|157515\|29\|CP029477\|CRISPRCasFinder	157515-157543	29	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	470991-471019	6	0.793
CP029477_2	2.6\|326766\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326766-326795	30	MN856101	Myoviridae sp. isolate 109, complete genome	22803-22832	6	0.8
CP029477_2	2.12\|327162\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327162-327191	30	MF001358	Enterococcus phage EF1, partial genome	56535-56564	6	0.8
CP029477_2	2.12\|327162\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327162-327191	30	MF001361	Enterococcus phage EF5, partial genome	60782-60811	6	0.8
CP029477_2	2.14\|327294\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327294-327323	30	MK554696	Fusobacterium phage Fnu1, complete genome	41873-41902	6	0.8
CP029477_2	2.18\|327558\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327558-327587	30	MN694706	Marine virus AFVG_250M574, complete genome	22107-22136	6	0.8
CP029477_2	2.18\|327558\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327558-327587	30	NZ_KM613043	Macrococcus caseolyticus strain 115 plasmid pBac115, complete sequence	19034-19063	6	0.8
CP029477_2	2.21\|327756\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327756-327785	30	NZ_CP016726	Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08A, complete sequence	41760-41789	6	0.8
CP029477_2	2.21\|327756\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327756-327785	30	NZ_LT599052	Lactococcus lactis subsp. lactis strain A12 plasmid pA12-3, complete sequence	38389-38418	6	0.8
CP029477_2	2.21\|327756\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327756-327785	30	NZ_CP042409	Lactococcus lactis strain CBA3619 plasmid unnamed, complete sequence	97286-97315	6	0.8
CP029477_2	2.22\|327822\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327822-327851	30	AJ131519	Lactobacillus bacteriophage phi adh complete genome	43626-43655	6	0.8
CP029477_2	2.22\|327822\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327822-327851	30	AJ131519	Lactobacillus bacteriophage phi adh complete genome	62-91	6	0.8
CP029477_2	2.22\|327822\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327822-327851	30	NC_000896	Lactobacillus prophage phiadh, complete genome	43626-43655	6	0.8
CP029477_2	2.22\|327822\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327822-327851	30	NC_000896	Lactobacillus prophage phiadh, complete genome	62-91	6	0.8
CP029477_2	2.22\|327822\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327822-327851	30	M62697	Bacteriophage adh repeat region and integrase (intG) gene, complete cds	1856-1885	6	0.8
CP029477_2	2.22\|327822\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327822-327851	30	M62697	Bacteriophage adh repeat region and integrase (intG) gene, complete cds	1635-1664	6	0.8
CP029477_2	2.23\|327888\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327888-327917	30	MF001358	Enterococcus phage EF1, partial genome	56535-56564	6	0.8
CP029477_2	2.23\|327888\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327888-327917	30	MF001361	Enterococcus phage EF5, partial genome	60782-60811	6	0.8
CP029477_2	2.28\|328218\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328218-328247	30	AP014500	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C79, * SEQUENCING IN PROGRESS *, 2 ordered pieces	31604-31633	6	0.8
CP029477_1	1.1\|157515\|29\|CP029477\|CRISPRCasFinder	157515-157543	29	HQ698922	Acinetobacter phage ZZ1, complete genome	120440-120468	7	0.759
CP029477_1	1.1\|157515\|29\|CP029477\|CRISPRCasFinder	157515-157543	29	MK240351	Acinetobacter phage Henu6, complete genome	12457-12485	7	0.759
CP029477_2	2.2\|326502\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326502-326531	30	NC_019699	Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence	18844-18873	7	0.767
CP029477_2	2.3\|326568\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326568-326597	30	NC_020157	Anabaena cylindrica PCC 7122 plasmid pANACY.02, complete sequence	85145-85174	7	0.767
CP029477_2	2.4\|326634\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326634-326663	30	HQ259105	Escherichia phage vB_EcoP_G7C, complete genome	26248-26277	7	0.767
CP029477_2	2.9\|326964\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326964-326993	30	NZ_LR215015	Mycoplasma canis strain NCTC10146 plasmid 6	5813-5842	7	0.767
CP029477_2	2.9\|326964\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326964-326993	30	NZ_LR215015	Mycoplasma canis strain NCTC10146 plasmid 6	2688-2717	7	0.767
CP029477_2	2.12\|327162\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327162-327191	30	MT074137	Bacteroides phage DAC16, complete genome	138114-138143	7	0.767
CP029477_2	2.12\|327162\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327162-327191	30	MT074142	Bacteroides phage DAC23, complete genome	140145-140174	7	0.767
CP029477_2	2.12\|327162\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327162-327191	30	MT074141	Bacteroides phage DAC22, complete genome	140589-140618	7	0.767
CP029477_2	2.12\|327162\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327162-327191	30	KR131710	Fusobacterium phage Funu1, complete genome	13157-13186	7	0.767
CP029477_2	2.12\|327162\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327162-327191	30	MT074146	Bacteroides phage SJC03, complete genome	127815-127844	7	0.767
CP029477_2	2.12\|327162\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327162-327191	30	MT074139	Bacteroides phage DAC19, complete genome	140226-140255	7	0.767
CP029477_2	2.12\|327162\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327162-327191	30	MT074140	Bacteroides phage DAC20, complete genome	140225-140254	7	0.767
CP029477_2	2.12\|327162\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327162-327191	30	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	648922-648951	7	0.767
CP029477_2	2.14\|327294\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327294-327323	30	NZ_AP018283	Chondrocystis sp. NIES-4102 plasmid plasmid2 DNA, complete genome	76194-76223	7	0.767
CP029477_2	2.18\|327558\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327558-327587	30	MW012634	Bacillus phage DLc1, complete genome	23225-23254	7	0.767
CP029477_2	2.18\|327558\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327558-327587	30	NC_015919	Borreliella bissettii DN127 plasmid lp54, complete sequence	20344-20373	7	0.767
CP029477_2	2.18\|327558\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327558-327587	30	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	429353-429382	7	0.767
CP029477_2	2.21\|327756\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327756-327785	30	NC_019430	Lactococcus lactis subsp. cremoris UC509.9 plasmid pCIS8, complete sequence	45886-45915	7	0.767
CP029477_2	2.21\|327756\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327756-327785	30	NC_019431	Lactococcus lactis subsp. cremoris UC509.9 plasmid pCIS7, complete sequence	16067-16096	7	0.767
CP029477_2	2.21\|327756\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327756-327785	30	NZ_CP016707	Lactococcus lactis subsp. cremoris strain UC109 plasmid pUC109A, complete sequence	34271-34300	7	0.767
CP029477_2	2.21\|327756\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327756-327785	30	NZ_CP016708	Lactococcus lactis subsp. cremoris strain UC109 plasmid pUC109B, complete sequence	45604-45633	7	0.767
CP029477_2	2.21\|327756\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327756-327785	30	NZ_CP016699	Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence	43447-43476	7	0.767
CP029477_2	2.21\|327756\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327756-327785	30	NZ_CP051519	Lactococcus lactis subsp. cremoris strain F plasmid pScrF52, complete sequence	7820-7849	7	0.767
CP029477_2	2.21\|327756\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327756-327785	30	NZ_CP051521	Lactococcus lactis subsp. cremoris strain F plasmid pScrF75, complete sequence	65117-65146	7	0.767
CP029477_2	2.21\|327756\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327756-327785	30	NC_009435	Lactococcus lactis NCDO 1867 plasmid pGdh442, complete sequence	31028-31057	7	0.767
CP029477_2	2.21\|327756\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327756-327785	30	NZ_CP016687	Lactococcus lactis subsp. cremoris strain 158 plasmid p158C, complete sequence	37712-37741	7	0.767
CP029477_2	2.23\|327888\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327888-327917	30	MT074137	Bacteroides phage DAC16, complete genome	138114-138143	7	0.767
CP029477_2	2.23\|327888\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327888-327917	30	MT074142	Bacteroides phage DAC23, complete genome	140145-140174	7	0.767
CP029477_2	2.23\|327888\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327888-327917	30	MT074141	Bacteroides phage DAC22, complete genome	140589-140618	7	0.767
CP029477_2	2.23\|327888\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327888-327917	30	KR131710	Fusobacterium phage Funu1, complete genome	13157-13186	7	0.767
CP029477_2	2.23\|327888\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327888-327917	30	MT074146	Bacteroides phage SJC03, complete genome	127815-127844	7	0.767
CP029477_2	2.23\|327888\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327888-327917	30	MT074139	Bacteroides phage DAC19, complete genome	140226-140255	7	0.767
CP029477_2	2.23\|327888\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327888-327917	30	MT074140	Bacteroides phage DAC20, complete genome	140225-140254	7	0.767
CP029477_2	2.23\|327888\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327888-327917	30	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	648922-648951	7	0.767
CP029477_2	2.27\|328152\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328152-328181	30	NZ_CP010109	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-3, complete sequence	26176-26205	7	0.767
CP029477_2	2.27\|328152\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328152-328181	30	NZ_CP015728	Bacillus cereus strain A1 plasmid pBCA2, complete sequence	15810-15839	7	0.767
CP029477_2	2.27\|328152\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328152-328181	30	KJ024807	Bacillus phage vB_BtS_BMBtp3, complete genome	13315-13344	7	0.767
CP029477_2	2.27\|328152\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328152-328181	30	NZ_CP016597	Bacillus cereus strain K8 plasmid pBCK802, complete sequence	31743-31772	7	0.767
CP029477_2	2.27\|328152\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328152-328181	30	NC_023074	Bacillus thuringiensis serovar tenebrionis str. YBT-1765 plasmid pBMB165, complete sequence	12397-12426	7	0.767
CP029477_2	2.27\|328152\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328152-328181	30	JX181829	Salmonella phage SKML-39, complete genome	131149-131178	7	0.767
CP029477_1	1.1\|157515\|29\|CP029477\|CRISPRCasFinder	157515-157543	29	NZ_CP022346	Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence	178080-178108	8	0.724
CP029477_1	1.1\|157515\|29\|CP029477\|CRISPRCasFinder	157515-157543	29	NZ_CP043831	Bacillus sp. BS98 plasmid unnamed1	81094-81122	8	0.724
CP029477_1	1.1\|157515\|29\|CP029477\|CRISPRCasFinder	157515-157543	29	CP046513	Bacillus cereus strain JHU plasmid p2, complete sequence	170352-170380	8	0.724
CP029477_2	2.1\|326436\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326436-326465	30	MN855980	Bacteriophage sp. isolate 176, complete genome	3978-4007	8	0.733
CP029477_2	2.4\|326634\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326634-326663	30	NZ_CP014893	Lactobacillus backii strain TMW 1.1992 plasmid pL11992-3, complete sequence	27584-27613	8	0.733
CP029477_2	2.4\|326634\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326634-326663	30	NZ_CP014624	Lactobacillus backii strain TMW 1.1988 plasmid L11988-1, complete sequence	37577-37606	8	0.733
CP029477_2	2.8\|326898\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326898-326927	30	NC_027332	Acinetobacter phage YMC13/03/R2096, complete genome	66333-66362	8	0.733
CP029477_2	2.9\|326964\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326964-326993	30	KX119188	Helicobacter phage FrB41M, complete genome	26894-26923	8	0.733
CP029477_2	2.9\|326964\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326964-326993	30	KX119192	Helicobacter phage Pt1918U, complete genome	27069-27098	8	0.733
CP029477_2	2.9\|326964\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326964-326993	30	KX119191	Helicobacter phage Pt4497U, complete genome	27795-27824	8	0.733
CP029477_2	2.9\|326964\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326964-326993	30	KX119189	Helicobacter phage Pt21299RU, complete genome	21457-21486	8	0.733
CP029477_2	2.12\|327162\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327162-327191	30	MG945690	UNVERIFIED: Microviridae sp. isolate 1419-1711, complete genome	3527-3556	8	0.733
CP029477_2	2.13\|327228\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327228-327257	30	MN693560	Marine virus AFVG_25M298, complete genome	2167-2196	8	0.733
CP029477_2	2.15\|327360\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327360-327389	30	NZ_CP049319	Caballeronia sp. SBC2 plasmid pSBC2-3, complete sequence	573052-573081	8	0.733
CP029477_2	2.16\|327426\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327426-327455	30	NC_013379	Staphylococcus epidermidis plasmid SAP106A, complete sequence	14036-14065	8	0.733
CP029477_2	2.18\|327558\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327558-327587	30	NZ_CP020005	Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence	225771-225800	8	0.733
CP029477_2	2.18\|327558\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327558-327587	30	NZ_CP014929	Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-5, complete sequence	17319-17348	8	0.733
CP029477_2	2.18\|327558\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327558-327587	30	NZ_CP031199	Lactobacillus brevis strain UCCLBBS449 plasmid pUCCLBBS449_A, complete sequence	44729-44758	8	0.733
CP029477_2	2.18\|327558\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327558-327587	30	MN693155	Marine virus AFVG_25M94, complete genome	53584-53613	8	0.733
CP029477_2	2.18\|327558\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327558-327587	30	MN856091	Myoviridae sp. isolate 9, partial genome	10227-10256	8	0.733
CP029477_2	2.21\|327756\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327756-327785	30	CP046512	Bacillus cereus strain JHU plasmid p1, complete sequence	62339-62368	8	0.733
CP029477_2	2.21\|327756\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327756-327785	30	NC_048827	Vibrio phage vB_VchM_Kuja, complete genome	87195-87224	8	0.733
CP029477_2	2.22\|327822\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327822-327851	30	AJ131519	Lactobacillus bacteriophage phi adh complete genome	43637-43666	8	0.733
CP029477_2	2.22\|327822\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327822-327851	30	NC_000896	Lactobacillus prophage phiadh, complete genome	43637-43666	8	0.733
CP029477_2	2.22\|327822\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327822-327851	30	M62697	Bacteriophage adh repeat region and integrase (intG) gene, complete cds	1845-1874	8	0.733
CP029477_2	2.23\|327888\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327888-327917	30	MG945690	UNVERIFIED: Microviridae sp. isolate 1419-1711, complete genome	3527-3556	8	0.733
CP029477_2	2.25\|328020\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328020-328049	30	NZ_CP045561	Acinetobacter nosocomialis strain AC1530 plasmid pAC1530, complete sequence	138834-138863	8	0.733
CP029477_2	2.25\|328020\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328020-328049	30	NZ_CP014478	Acinetobacter pittii strain AP_882 plasmid pNDM-AP_882, complete sequence	137890-137919	8	0.733
CP029477_2	2.26\|328086\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328086-328115	30	MN693300	Marine virus AFVG_25M71, complete genome	40359-40388	8	0.733
CP029477_2	2.26\|328086\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328086-328115	30	MN693380	Marine virus AFVG_25M72, complete genome	41075-41104	8	0.733
CP029477_2	2.27\|328152\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328152-328181	30	KP280063	Vibrio phage phi 3, complete genome	28321-28350	8	0.733
CP029477_2	2.28\|328218\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328218-328247	30	NZ_CP041688	Chryseobacterium sp. SNU WT5 plasmid unnamed1, complete sequence	2624-2653	8	0.733
CP029477_2	2.29\|328284\|30\|CP029477\|CRISPRCasFinder,CRT	328284-328313	30	MN270268	Streptococcus phage phi-SsuHCJ31_comEC, complete genome	8393-8422	8	0.733
CP029477_2	2.9\|326964\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326964-326993	30	NZ_CP011383	Calothrix sp. 336/3 plasmid unnamed1	14115-14144	9	0.7
CP029477_2	2.9\|326964\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326964-326993	30	MN693868	Marine virus AFVG_250M1130, complete genome	12347-12376	9	0.7
CP029477_2	2.9\|326964\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	326964-326993	30	KX119194	Helicobacter phage FrG12G, complete genome	27010-27039	9	0.7
CP029477_2	2.12\|327162\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327162-327191	30	CP048745	Buchnera aphidicola (Aphis urticata) isolate AURT-53B plasmid pLeu, complete sequence	7123-7152	9	0.7
CP029477_2	2.22\|327822\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327822-327851	30	NZ_CP028244	Lactobacillus plantarum strain SRCM101518 plasmid unnamed3, complete sequence	10742-10771	9	0.7
CP029477_2	2.22\|327822\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327822-327851	30	NZ_CP054261	Lactobacillus plantarum strain TCI507 plasmid unnamed2	34171-34200	9	0.7
CP029477_2	2.23\|327888\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327888-327917	30	CP048745	Buchnera aphidicola (Aphis urticata) isolate AURT-53B plasmid pLeu, complete sequence	7123-7152	9	0.7
CP029477_2	2.25\|328020\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328020-328049	30	MK448821	Streptococcus phage Javan623, complete genome	8232-8261	9	0.7
CP029477_2	2.26\|328086\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328086-328115	30	MN694471	Marine virus AFVG_250M232, complete genome	23834-23863	9	0.7
CP029477_2	2.28\|328218\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328218-328247	30	NZ_CP041045	Paracoccus sp. AK26 plasmid pAK1, complete sequence	134205-134234	9	0.7
CP029477_2	2.18\|327558\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327558-327587	30	NZ_CP030242	Moraxella bovis strain Epp63 (300) plasmid pMBO-1, complete sequence	20893-20922	10	0.667
CP029477_2	2.18\|327558\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	327558-327587	30	NC_010893	Moraxella bovis Epp63 plasmid pMBO-1, complete sequence	20891-20920	10	0.667
CP029477_2	2.25\|328020\|30\|CP029477\|PILER-CR,CRISPRCasFinder,CRT	328020-328049	30	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1111239-1111268	10	0.667

1. spacer 2.2|326502|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN855697 (Bacteriophage sp. isolate 461, complete genome) position: , mismatch: 0, identity: 1.0

ctgttaaattcaaaattggctttagaaact	CRISPR spacer
ctgttaaattcaaaattggctttagaaact	Protospacer
******************************

2. spacer 2.12|327162|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN855985 (Siphoviridae sp. isolate 349, complete genome) position: , mismatch: 0, identity: 1.0

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
agaaagtgtttaaaaataaaatgttaagtt	Protospacer
******************************

3. spacer 2.23|327888|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN855985 (Siphoviridae sp. isolate 349, complete genome) position: , mismatch: 0, identity: 1.0

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
agaaagtgtttaaaaataaaatgttaagtt	Protospacer
******************************

4. spacer 2.27|328152|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN856033 (Myoviridae sp. isolate 312, complete genome) position: , mismatch: 0, identity: 1.0

tgatgaatctcttgacccacagtcaagcgc	CRISPR spacer
tgatgaatctcttgacccacagtcaagcgc	Protospacer
******************************

5. spacer 2.28|328218|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN856065 (Bacteriophage sp. isolate 431, complete genome) position: , mismatch: 0, identity: 1.0

caacaaaaatgcaagctaaaaaatgggcta	CRISPR spacer
caacaaaaatgcaagctaaaaaatgggcta	Protospacer
******************************

6. spacer 2.12|327162|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN856056 (Myoviridae sp. isolate 80, complete genome) position: , mismatch: 2, identity: 0.933

agaaagtgttt-aaaaataaaatgttaagtt	CRISPR spacer
-gaaagtgtttaaaaaataaaatgttaagtc	Protospacer
 ********** ******************.

7. spacer 2.17|327492|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN856008 (Siphoviridae sp. isolate 424, complete genome) position: , mismatch: 2, identity: 0.933

caaggttgtcagtcggctgttagatcagct	CRISPR spacer
caaggttgtcagtcggctattagattagct	Protospacer
******************.******.****

8. spacer 2.22|327822|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN856043 (Siphoviridae sp. isolate 368, complete genome) position: , mismatch: 2, identity: 0.933

tgtaaaagggacacaaaagggacaaatata	CRISPR spacer
tgtaaaagggacaaaaaagggacaaaaata	Protospacer
************* ************ ***

9. spacer 2.23|327888|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN856056 (Myoviridae sp. isolate 80, complete genome) position: , mismatch: 2, identity: 0.933

agaaagtgttt-aaaaataaaatgttaagtt	CRISPR spacer
-gaaagtgtttaaaaaataaaatgttaagtc	Protospacer
 ********** ******************.

10. spacer 2.19|327624|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN856069 (Bacteriophage sp. isolate 102, complete genome) position: , mismatch: 3, identity: 0.9

cgttatttgattttttacagtggggtatat	CRISPR spacer
tgtaatttgattttttacagtcgggtatat	Protospacer
.** ***************** ********

11. spacer 2.24|327954|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN856069 (Bacteriophage sp. isolate 102, complete genome) position: , mismatch: 3, identity: 0.9

cgttatttgattttttacagtggggtatat	CRISPR spacer
tgtaatttgattttttacagtcgggtatat	Protospacer
.** ***************** ********

12. spacer 2.6|326766|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to AJ131519 (Lactobacillus bacteriophage phi adh complete genome) position: , mismatch: 5, identity: 0.833

tggctcaattgaggctaaggaaaagttaga	CRISPR spacer
tggatcaattgaagctaaggaaaaacaaga	Protospacer
*** ********.***********.. ***

13. spacer 2.6|326766|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NC_000896 (Lactobacillus prophage phiadh, complete genome) position: , mismatch: 5, identity: 0.833

tggctcaattgaggctaaggaaaagttaga	CRISPR spacer
tggatcaattgaagctaaggaaaaacaaga	Protospacer
*** ********.***********.. ***

14. spacer 2.14|327294|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MG945468 (UNVERIFIED: Microviridae sp. isolate 268-1801, complete genome) position: , mismatch: 5, identity: 0.833

atttttaggaggctttaaaatgcaagttaa	CRISPR spacer
atttttaggagattttaaaatgcagtataa	Protospacer
***********..***********.  ***

15. spacer 2.18|327558|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 5, identity: 0.833

aattagctttttatttttaatatagccgta-	CRISPR spacer
gaatatctttttatttttaatata-ccgaac	Protospacer
.* ** ****************** *** *

16. spacer 2.21|327756|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016717 (Lactococcus lactis subsp. lactis strain UC063 plasmid pUC063C, complete sequence) position: , mismatch: 5, identity: 0.833

atataatagacttgttaaaagataagagtt	CRISPR spacer
gttcaatagacttgttcaaagataagaggt	Protospacer
.* .************ *********** *

17. spacer 1.1|157515|29|CP029477|CRISPRCasFinder matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 6, identity: 0.793

gcaagatatttctgatattaatacgtggg	CRISPR spacer
gcaagatatttctgagatttatatcttag	Protospacer
*************** *** ***. * .*

18. spacer 2.6|326766|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN856101 (Myoviridae sp. isolate 109, complete genome) position: , mismatch: 6, identity: 0.8

tggctcaattgaggctaaggaaaagttaga	CRISPR spacer
gggctcaattgaagctaaagaaaaacaaga	Protospacer
 ***********.*****.*****.. ***

19. spacer 2.12|327162|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MF001358 (Enterococcus phage EF1, partial genome) position: , mismatch: 6, identity: 0.8

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
ataaaatgttaaaaaataaaatgttaatga	Protospacer
* ***.**** ****************

20. spacer 2.12|327162|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MF001361 (Enterococcus phage EF5, partial genome) position: , mismatch: 6, identity: 0.8

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
ataaaatgttaaaaaataaaatgttaatga	Protospacer
* ***.**** ****************

21. spacer 2.14|327294|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MK554696 (Fusobacterium phage Fnu1, complete genome) position: , mismatch: 6, identity: 0.8

atttttaggaggctttaaaatgcaagttaa	CRISPR spacer
ttttttaggaggttttaaaatgaaaataga	Protospacer
 ***********.********* **.* .*

22. spacer 2.18|327558|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN694706 (Marine virus AFVG_250M574, complete genome) position: , mismatch: 6, identity: 0.8

aattagctttttatttttaatatagccgta	CRISPR spacer
catttgctttttatttttaatatacttgtc	Protospacer
 *** ******************* ..**

23. spacer 2.18|327558|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KM613043 (Macrococcus caseolyticus strain 115 plasmid pBac115, complete sequence) position: , mismatch: 6, identity: 0.8

aattagctttttatttttaatatagccgta	CRISPR spacer
atttatctttttatttttaatatatgtgaa	Protospacer
* *** ******************  .* *

24. spacer 2.21|327756|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016726 (Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08A, complete sequence) position: , mismatch: 6, identity: 0.8

atataatagacttgttaaaagataagagtt	CRISPR spacer
atataatagacttgataaaagacaaaaaag	Protospacer
************** *******.**.*.

25. spacer 2.21|327756|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT599052 (Lactococcus lactis subsp. lactis strain A12 plasmid pA12-3, complete sequence) position: , mismatch: 6, identity: 0.8

atataatagacttgttaaaagataagagtt	CRISPR spacer
atataatagacttgataaaagacaaaaaag	Protospacer
************** *******.**.*.

26. spacer 2.21|327756|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042409 (Lactococcus lactis strain CBA3619 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

atataatagacttgttaaaagataagagtt	CRISPR spacer
atataatagacttgataaaagacaaaaaag	Protospacer
************** *******.**.*.

27. spacer 2.22|327822|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to AJ131519 (Lactobacillus bacteriophage phi adh complete genome) position: , mismatch: 6, identity: 0.8

tgtaaaagggacacaaaagggacaaatata	CRISPR spacer
ttaaaaagggacaaaaaagggacaaaaaag	Protospacer
*  ********** ************ * .

28. spacer 2.22|327822|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to AJ131519 (Lactobacillus bacteriophage phi adh complete genome) position: , mismatch: 6, identity: 0.8

tgtaaaagggacacaaaagggacaaatata	CRISPR spacer
ttgaaaagggacagaaaagggacagtttta	Protospacer
*  ********** **********. * **

29. spacer 2.22|327822|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NC_000896 (Lactobacillus prophage phiadh, complete genome) position: , mismatch: 6, identity: 0.8

tgtaaaagggacacaaaagggacaaatata	CRISPR spacer
ttaaaaagggacaaaaaagggacaaaaaag	Protospacer
*  ********** ************ * .

30. spacer 2.22|327822|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NC_000896 (Lactobacillus prophage phiadh, complete genome) position: , mismatch: 6, identity: 0.8

tgtaaaagggacacaaaagggacaaatata	CRISPR spacer
ttgaaaagggacagaaaagggacagtttta	Protospacer
*  ********** **********. * **

31. spacer 2.22|327822|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to M62697 (Bacteriophage adh repeat region and integrase (intG) gene, complete cds) position: , mismatch: 6, identity: 0.8

tgtaaaagggacacaaaagggacaaatata	CRISPR spacer
ttaaaaagggacaaaaaagggacaaaaaag	Protospacer
*  ********** ************ * .

32. spacer 2.22|327822|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to M62697 (Bacteriophage adh repeat region and integrase (intG) gene, complete cds) position: , mismatch: 6, identity: 0.8

tgtaaaagggacacaaaagggacaaatata	CRISPR spacer
ttgaaaagggacagaaaagggacagtttta	Protospacer
*  ********** **********. * **

33. spacer 2.23|327888|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MF001358 (Enterococcus phage EF1, partial genome) position: , mismatch: 6, identity: 0.8

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
ataaaatgttaaaaaataaaatgttaatga	Protospacer
* ***.**** ****************

34. spacer 2.23|327888|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MF001361 (Enterococcus phage EF5, partial genome) position: , mismatch: 6, identity: 0.8

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
ataaaatgttaaaaaataaaatgttaatga	Protospacer
* ***.**** ****************

35. spacer 2.28|328218|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to AP014500 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C79, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 6, identity: 0.8

caacaaaaatgcaagctaaaaaatgggcta	CRISPR spacer
taattataatgaaagctaaaaaatggtcta	Protospacer
.**. * **** ************** ***

36. spacer 1.1|157515|29|CP029477|CRISPRCasFinder matches to HQ698922 (Acinetobacter phage ZZ1, complete genome) position: , mismatch: 7, identity: 0.759

gcaagatatttctgatattaatacgtggg	CRISPR spacer
ggaagatatttctggtattaatattactg	Protospacer
* ************.********.    *

37. spacer 1.1|157515|29|CP029477|CRISPRCasFinder matches to MK240351 (Acinetobacter phage Henu6, complete genome) position: , mismatch: 7, identity: 0.759

gcaagatatttctgatattaatacgtggg	CRISPR spacer
ggaagatatttctggtattaatattactg	Protospacer
* ************.********.    *

38. spacer 2.2|326502|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NC_019699 (Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence) position: , mismatch: 7, identity: 0.767

ctgttaaattcaaaattggctttagaaact	CRISPR spacer
tggctaaattcagtattggctttagaaaag	Protospacer
. *.********. **************

39. spacer 2.3|326568|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NC_020157 (Anabaena cylindrica PCC 7122 plasmid pANACY.02, complete sequence) position: , mismatch: 7, identity: 0.767

caaaatgatgctgctttggatacacaaata	CRISPR spacer
gaagatgaagctgctttggatacatcagaa	Protospacer
 **.**** ***************. *. *

40. spacer 2.4|326634|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to HQ259105 (Escherichia phage vB_EcoP_G7C, complete genome) position: , mismatch: 7, identity: 0.767

caccaatgatattttttaacgatgaactca	CRISPR spacer
atccaatgatattttttgacgatggtttct	Protospacer
  ***************.******. .**

41. spacer 2.9|326964|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR215015 (Mycoplasma canis strain NCTC10146 plasmid 6) position: , mismatch: 7, identity: 0.767

taaaagattttttgaatggatattctaaaa	CRISPR spacer
aattttatttttttaatgaatattctaaaa	Protospacer
 *    ******* ****.***********

42. spacer 2.9|326964|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR215015 (Mycoplasma canis strain NCTC10146 plasmid 6) position: , mismatch: 7, identity: 0.767

taaaagattttttgaatggatattctaaaa	CRISPR spacer
aattttatttttttaatgaatattctaaaa	Protospacer
 *    ******* ****.***********

43. spacer 2.12|327162|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MT074137 (Bacteroides phage DAC16, complete genome) position: , mismatch: 7, identity: 0.767

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
agtaattgtttaaaaataaaatgggaaaga	Protospacer
** ** *****************  **.

44. spacer 2.12|327162|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MT074142 (Bacteroides phage DAC23, complete genome) position: , mismatch: 7, identity: 0.767

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
agtaattgtttaaaaataaaatgggaaaga	Protospacer
** ** *****************  **.

45. spacer 2.12|327162|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MT074141 (Bacteroides phage DAC22, complete genome) position: , mismatch: 7, identity: 0.767

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
agtaattgtttaaaaataaaatgggaaaga	Protospacer
** ** *****************  **.

46. spacer 2.12|327162|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to KR131710 (Fusobacterium phage Funu1, complete genome) position: , mismatch: 7, identity: 0.767

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
gaaaagtgtttagaaataaattgttcacat	Protospacer
..**********.******* **** *  *

47. spacer 2.12|327162|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MT074146 (Bacteroides phage SJC03, complete genome) position: , mismatch: 7, identity: 0.767

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
agtaattgtttaaaaataaaatgggaaaga	Protospacer
** ** *****************  **.

48. spacer 2.12|327162|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MT074139 (Bacteroides phage DAC19, complete genome) position: , mismatch: 7, identity: 0.767

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
agtaattgtttaaaaataaaatgggaaaga	Protospacer
** ** *****************  **.

49. spacer 2.12|327162|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MT074140 (Bacteroides phage DAC20, complete genome) position: , mismatch: 7, identity: 0.767

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
agtaattgtttaaaaataaaatgggaaaga	Protospacer
** ** *****************  **.

50. spacer 2.12|327162|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.767

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
aaacagcgtttaaaaataaaatgtttttgt	Protospacer
*.* **.******************    *

51. spacer 2.14|327294|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018283 (Chondrocystis sp. NIES-4102 plasmid plasmid2 DNA, complete genome) position: , mismatch: 7, identity: 0.767

atttttaggaggctttaaaatgcaagttaa---	CRISPR spacer
atttttagtaggctttaaaat---tattgattt	Protospacer
******** ************    .**.*

52. spacer 2.18|327558|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MW012634 (Bacillus phage DLc1, complete genome) position: , mismatch: 7, identity: 0.767

aattagctttttatttttaatatagccgta	CRISPR spacer
cataagctttttatttttaatatattttga	Protospacer
 ** ******************** ..  *

53. spacer 2.18|327558|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NC_015919 (Borreliella bissettii DN127 plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.767

aattagctttttatttttaatatagccgta	CRISPR spacer
tattagctttttattttttataaaaaatta	Protospacer
 ***************** *** *.   **

54. spacer 2.18|327558|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 7, identity: 0.767

aattagctttttatttttaatatagccgta	CRISPR spacer
agatggctttttagttttaatatagcgcga	Protospacer
*. *.******** ************   *

55. spacer 2.21|327756|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NC_019430 (Lactococcus lactis subsp. cremoris UC509.9 plasmid pCIS8, complete sequence) position: , mismatch: 7, identity: 0.767

atataatagacttgttaaaagataagagtt	CRISPR spacer
gtataatagacttgataaaagacaaaaaag	Protospacer
.************* *******.**.*.

56. spacer 2.21|327756|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NC_019431 (Lactococcus lactis subsp. cremoris UC509.9 plasmid pCIS7, complete sequence) position: , mismatch: 7, identity: 0.767

atataatagacttgttaaaagataagagtt	CRISPR spacer
gtataatagacttgataaaagacaaaaaag	Protospacer
.************* *******.**.*.

57. spacer 2.21|327756|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016707 (Lactococcus lactis subsp. cremoris strain UC109 plasmid pUC109A, complete sequence) position: , mismatch: 7, identity: 0.767

atataatagacttgttaaaagataagagtt	CRISPR spacer
gtataatagacttgataaaagacaaaaaag	Protospacer
.************* *******.**.*.

58. spacer 2.21|327756|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016708 (Lactococcus lactis subsp. cremoris strain UC109 plasmid pUC109B, complete sequence) position: , mismatch: 7, identity: 0.767

atataatagacttgttaaaagataagagtt	CRISPR spacer
gtataatagacttgataaaagacaaaaaag	Protospacer
.************* *******.**.*.

59. spacer 2.21|327756|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016699 (Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence) position: , mismatch: 7, identity: 0.767

atataatagacttgttaaaagataagagtt	CRISPR spacer
gtataatagacttgataaaagacaaaaaag	Protospacer
.************* *******.**.*.

60. spacer 2.21|327756|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051519 (Lactococcus lactis subsp. cremoris strain F plasmid pScrF52, complete sequence) position: , mismatch: 7, identity: 0.767

atataatagacttgttaaaagataagagtt	CRISPR spacer
gtataatagacttgataaaagacaaaaaag	Protospacer
.************* *******.**.*.

61. spacer 2.21|327756|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051521 (Lactococcus lactis subsp. cremoris strain F plasmid pScrF75, complete sequence) position: , mismatch: 7, identity: 0.767

atataatagacttgttaaaagataagagtt	CRISPR spacer
gtataatagacttgataaaagacaaaaaag	Protospacer
.************* *******.**.*.

62. spacer 2.21|327756|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NC_009435 (Lactococcus lactis NCDO 1867 plasmid pGdh442, complete sequence) position: , mismatch: 7, identity: 0.767

atataatagacttgttaaaagataagagtt	CRISPR spacer
gtataatagacttgataaaagacaaaaaag	Protospacer
.************* *******.**.*.

63. spacer 2.21|327756|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016687 (Lactococcus lactis subsp. cremoris strain 158 plasmid p158C, complete sequence) position: , mismatch: 7, identity: 0.767

atataatagacttgttaaaagataagagtt	CRISPR spacer
gtataatagacttgataaaagacaaaaaag	Protospacer
.************* *******.**.*.

64. spacer 2.23|327888|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MT074137 (Bacteroides phage DAC16, complete genome) position: , mismatch: 7, identity: 0.767

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
agtaattgtttaaaaataaaatgggaaaga	Protospacer
** ** *****************  **.

65. spacer 2.23|327888|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MT074142 (Bacteroides phage DAC23, complete genome) position: , mismatch: 7, identity: 0.767

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
agtaattgtttaaaaataaaatgggaaaga	Protospacer
** ** *****************  **.

66. spacer 2.23|327888|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MT074141 (Bacteroides phage DAC22, complete genome) position: , mismatch: 7, identity: 0.767

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
agtaattgtttaaaaataaaatgggaaaga	Protospacer
** ** *****************  **.

67. spacer 2.23|327888|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to KR131710 (Fusobacterium phage Funu1, complete genome) position: , mismatch: 7, identity: 0.767

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
gaaaagtgtttagaaataaattgttcacat	Protospacer
..**********.******* **** *  *

68. spacer 2.23|327888|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MT074146 (Bacteroides phage SJC03, complete genome) position: , mismatch: 7, identity: 0.767

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
agtaattgtttaaaaataaaatgggaaaga	Protospacer
** ** *****************  **.

69. spacer 2.23|327888|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MT074139 (Bacteroides phage DAC19, complete genome) position: , mismatch: 7, identity: 0.767

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
agtaattgtttaaaaataaaatgggaaaga	Protospacer
** ** *****************  **.

70. spacer 2.23|327888|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MT074140 (Bacteroides phage DAC20, complete genome) position: , mismatch: 7, identity: 0.767

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
agtaattgtttaaaaataaaatgggaaaga	Protospacer
** ** *****************  **.

71. spacer 2.23|327888|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.767

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
aaacagcgtttaaaaataaaatgtttttgt	Protospacer
*.* **.******************    *

72. spacer 2.27|328152|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010109 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-3, complete sequence) position: , mismatch: 7, identity: 0.767

tgatgaatctcttgacccacagtcaagcgc	CRISPR spacer
tgatgaatcttttgacccacagcaattagt	Protospacer
**********.***********. *   *.

73. spacer 2.27|328152|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015728 (Bacillus cereus strain A1 plasmid pBCA2, complete sequence) position: , mismatch: 7, identity: 0.767

tgatgaatctcttgacccacagtcaagcgc	CRISPR spacer
tgatgaatcttttgacccacagcaattagt	Protospacer
**********.***********. *   *.

74. spacer 2.27|328152|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to KJ024807 (Bacillus phage vB_BtS_BMBtp3, complete genome) position: , mismatch: 7, identity: 0.767

tgatgaatctcttgacccacagtcaagcgc	CRISPR spacer
tgatgaatcttttgacccacagcaattagt	Protospacer
**********.***********. *   *.

75. spacer 2.27|328152|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016597 (Bacillus cereus strain K8 plasmid pBCK802, complete sequence) position: , mismatch: 7, identity: 0.767

tgatgaatctcttgacccacagtcaagcgc	CRISPR spacer
tgatgaatcttttgacccacagcaattagt	Protospacer
**********.***********. *   *.

76. spacer 2.27|328152|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NC_023074 (Bacillus thuringiensis serovar tenebrionis str. YBT-1765 plasmid pBMB165, complete sequence) position: , mismatch: 7, identity: 0.767

tgatgaatctcttgacccacagtcaagcgc	CRISPR spacer
tgatgaatcttttgacccacagcaattagt	Protospacer
**********.***********. *   *.

77. spacer 2.27|328152|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to JX181829 (Salmonella phage SKML-39, complete genome) position: , mismatch: 7, identity: 0.767

tgatgaatctcttgacccacagtcaagcgc	CRISPR spacer
cgatgaagctcttgacccacagtatcacga	Protospacer
.****** ***************   .**

78. spacer 1.1|157515|29|CP029477|CRISPRCasFinder matches to NZ_CP022346 (Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.724

gcaagatatttctgatattaatacgtggg	CRISPR spacer
aaaagatacttctgatattaatatgaact	Protospacer
. ******.**************.* .

79. spacer 1.1|157515|29|CP029477|CRISPRCasFinder matches to NZ_CP043831 (Bacillus sp. BS98 plasmid unnamed1) position: , mismatch: 8, identity: 0.724

gcaagatatttctgatattaatacgtggg	CRISPR spacer
agtagatatttctgatattgatacatttt	Protospacer
.  ****************.****.*

80. spacer 1.1|157515|29|CP029477|CRISPRCasFinder matches to CP046513 (Bacillus cereus strain JHU plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.724

gcaagatatttctgatattaatacgtggg	CRISPR spacer
aaaagatacttctgatattaatatgaact	Protospacer
. ******.**************.* .

81. spacer 2.1|326436|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN855980 (Bacteriophage sp. isolate 176, complete genome) position: , mismatch: 8, identity: 0.733

ctgtcaacgacccagacgaaataggcaatc	CRISPR spacer
atgggttagacccagacgaaaaaggcaatt	Protospacer
 **     ************* *******.

82. spacer 2.4|326634|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014893 (Lactobacillus backii strain TMW 1.1992 plasmid pL11992-3, complete sequence) position: , mismatch: 8, identity: 0.733

caccaatgatattttttaacgatgaactca	CRISPR spacer
gaatcgtgatatgttttaacaatgaactcg	Protospacer
 * . .****** *******.********.

83. spacer 2.4|326634|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014624 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-1, complete sequence) position: , mismatch: 8, identity: 0.733

caccaatgatattttttaacgatgaactca	CRISPR spacer
gaatcgtgatatgttttaacaatgaactcg	Protospacer
 * . .****** *******.********.

84. spacer 2.8|326898|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NC_027332 (Acinetobacter phage YMC13/03/R2096, complete genome) position: , mismatch: 8, identity: 0.733

gaggcttgtattatagcgctagaaagtggg	CRISPR spacer
gagggttgtattctagcgctagagcttatc	Protospacer
**** ******* **********.  *.

85. spacer 2.9|326964|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to KX119188 (Helicobacter phage FrB41M, complete genome) position: , mismatch: 8, identity: 0.733

taaaag-----attttttgaatggatattctaaaa	CRISPR spacer
-----gtttttgttttttgaattgattttctaaaa	Protospacer
     *     .********** *** ********

86. spacer 2.9|326964|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to KX119192 (Helicobacter phage Pt1918U, complete genome) position: , mismatch: 8, identity: 0.733

taaaag-----attttttgaatggatattctaaaa	CRISPR spacer
-----gtttttgttttttgaattgattttctaaaa	Protospacer
     *     .********** *** ********

87. spacer 2.9|326964|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to KX119191 (Helicobacter phage Pt4497U, complete genome) position: , mismatch: 8, identity: 0.733

taaaag-----attttttgaatggatattctaaaa	CRISPR spacer
-----gtttttgttttttgaattgattttctaaaa	Protospacer
     *     .********** *** ********

88. spacer 2.9|326964|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to KX119189 (Helicobacter phage Pt21299RU, complete genome) position: , mismatch: 8, identity: 0.733

taaaag-----attttttgaatggatattctaaaa	CRISPR spacer
-----gtttttgttttttgaattgattttctaaaa	Protospacer
     *     .********** *** ********

89. spacer 2.12|327162|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MG945690 (UNVERIFIED: Microviridae sp. isolate 1419-1711, complete genome) position: , mismatch: 8, identity: 0.733

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
tagtggcgtttaaaaattaaatgttatgtt	Protospacer
 .. .*.********** ******** ***

90. spacer 2.13|327228|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN693560 (Marine virus AFVG_25M298, complete genome) position: , mismatch: 8, identity: 0.733

tagaaaacgcaaaggcgtggattaagtttt	CRISPR spacer
taaaaaacgcaaaggcgtgcattcaaaaaa	Protospacer
**.**************** *** *.

91. spacer 2.15|327360|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049319 (Caballeronia sp. SBC2 plasmid pSBC2-3, complete sequence) position: , mismatch: 8, identity: 0.733

attcatgcacccaataatacttggctgtgt	CRISPR spacer
gtcgatgcacccaataatactgggcgggaa	Protospacer
.*. ***************** *** * .

92. spacer 2.16|327426|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NC_013379 (Staphylococcus epidermidis plasmid SAP106A, complete sequence) position: , mismatch: 8, identity: 0.733

tggcgttacgtattttgaaattagccctag	CRISPR spacer
tggcgttacatattatgaaattattgacgg	Protospacer
*********.**** ******** .  ..*

93. spacer 2.18|327558|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020005 (Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

aattagctttttatttttaatatagccgta	CRISPR spacer
aattatctttttatttttaaaattatattt	Protospacer
***** ************** ** ..  *

94. spacer 2.18|327558|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014929 (Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-5, complete sequence) position: , mismatch: 8, identity: 0.733

aattagctttttatttttaatatagccgta	CRISPR spacer
gatgagctttttatttttaataaatgtttt	Protospacer
.** ****************** *  . *

95. spacer 2.18|327558|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031199 (Lactobacillus brevis strain UCCLBBS449 plasmid pUCCLBBS449_A, complete sequence) position: , mismatch: 8, identity: 0.733

aattagctttttatttttaatatagccgta	CRISPR spacer
gatgagctttttatttttaataaatgtttt	Protospacer
.** ****************** *  . *

96. spacer 2.18|327558|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN693155 (Marine virus AFVG_25M94, complete genome) position: , mismatch: 8, identity: 0.733

aattagctttttatttttaatatagccgta---	CRISPR spacer
ttttagctttttattttttatat---tatatgt	Protospacer
  **************** ****   ..**

97. spacer 2.18|327558|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN856091 (Myoviridae sp. isolate 9, partial genome) position: , mismatch: 8, identity: 0.733

aattagctttttatttttaatatagccgta	CRISPR spacer
aagtagctttttatttttaattgtccactg	Protospacer
** ******************    *  *.

98. spacer 2.21|327756|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to CP046512 (Bacillus cereus strain JHU plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

atataatagacttgttaaaagataagagtt	CRISPR spacer
ctataatagacttgtacaaagatataataa	Protospacer
 **************  ******* .*

99. spacer 2.21|327756|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NC_048827 (Vibrio phage vB_VchM_Kuja, complete genome) position: , mismatch: 8, identity: 0.733

atataatagacttgttaaaagataagagtt	CRISPR spacer
aaataagtgacttgttaaaagataaagaaa	Protospacer
* ****  *****************...

100. spacer 2.22|327822|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to AJ131519 (Lactobacillus bacteriophage phi adh complete genome) position: , mismatch: 8, identity: 0.733

tgtaaaagggacacaaaagggacaaatata	CRISPR spacer
caaaaaagggacaaaaaagggacaataagt	Protospacer
.. ********** ***********  *

101. spacer 2.22|327822|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NC_000896 (Lactobacillus prophage phiadh, complete genome) position: , mismatch: 8, identity: 0.733

tgtaaaagggacacaaaagggacaaatata	CRISPR spacer
caaaaaagggacaaaaaagggacaataagt	Protospacer
.. ********** ***********  *

102. spacer 2.22|327822|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to M62697 (Bacteriophage adh repeat region and integrase (intG) gene, complete cds) position: , mismatch: 8, identity: 0.733

tgtaaaagggacacaaaagggacaaatata	CRISPR spacer
caaaaaagggacaaaaaagggacaataagt	Protospacer
.. ********** ***********  *

103. spacer 2.23|327888|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MG945690 (UNVERIFIED: Microviridae sp. isolate 1419-1711, complete genome) position: , mismatch: 8, identity: 0.733

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
tagtggcgtttaaaaattaaatgttatgtt	Protospacer
 .. .*.********** ******** ***

104. spacer 2.25|328020|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045561 (Acinetobacter nosocomialis strain AC1530 plasmid pAC1530, complete sequence) position: , mismatch: 8, identity: 0.733

aattaagttaggagaacgatatgaagcgta	CRISPR spacer
gccgatcttaggagaataatatgaagcgta	Protospacer
. . *  *********..************

105. spacer 2.25|328020|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014478 (Acinetobacter pittii strain AP_882 plasmid pNDM-AP_882, complete sequence) position: , mismatch: 8, identity: 0.733

aattaagttaggagaacgatatgaagcgta	CRISPR spacer
gccgatcttaggagaataatatgaagcgta	Protospacer
. . *  *********..************

106. spacer 2.26|328086|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN693300 (Marine virus AFVG_25M71, complete genome) position: , mismatch: 8, identity: 0.733

aagaacacatagtattagtaaagggtgttg	CRISPR spacer
gttcagacaaagtattagtaaagggtggta	Protospacer
.   * *** ***************** *.

107. spacer 2.26|328086|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN693380 (Marine virus AFVG_25M72, complete genome) position: , mismatch: 8, identity: 0.733

aagaacacatagtattagtaaagggtgttg	CRISPR spacer
gttcagacaaagtattagtaaagggtggta	Protospacer
.   * *** ***************** *.

108. spacer 2.27|328152|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to KP280063 (Vibrio phage phi 3, complete genome) position: , mismatch: 8, identity: 0.733

tgatgaatctcttgacccacagt-----caagcgc	CRISPR spacer
cgatgaatctctggactcacagtctttaca-----	Protospacer
.*********** ***.******     **

109. spacer 2.28|328218|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041688 (Chryseobacterium sp. SNU WT5 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

caacaaaaatgcaagctaaaaaatgggcta	CRISPR spacer
gatatttaattcaagctaaaaaatggtcta	Protospacer
 *     *** *************** ***

110. spacer 2.29|328284|30|CP029477|CRISPRCasFinder,CRT matches to MN270268 (Streptococcus phage phi-SsuHCJ31_comEC, complete genome) position: , mismatch: 8, identity: 0.733

aggatatgcaacagactttgccagaaagac	CRISPR spacer
tggatatgcaacagacattgccttagttaa	Protospacer
 *************** *****  *.  *

111. spacer 2.9|326964|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011383 (Calothrix sp. 336/3 plasmid unnamed1) position: , mismatch: 9, identity: 0.7

taaaagattttttgaatggatattctaaaa	CRISPR spacer
gtggttattttttgactcgatattctaaag	Protospacer
  ..  ********* * ***********.

112. spacer 2.9|326964|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN693868 (Marine virus AFVG_250M1130, complete genome) position: , mismatch: 9, identity: 0.7

taaaagattttttgaatggatattctaaaa	CRISPR spacer
ggtttaatttattggatggatattctaaat	Protospacer
 .   .**** ***.**************

113. spacer 2.9|326964|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to KX119194 (Helicobacter phage FrG12G, complete genome) position: , mismatch: 9, identity: 0.7

taaaagattttttgaatggatattctaaaa	CRISPR spacer
gttgttgttttttgaattgattttctaaaa	Protospacer
   .  .********** *** ********

114. spacer 2.12|327162|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to CP048745 (Buchnera aphidicola (Aphis urticata) isolate AURT-53B plasmid pLeu, complete sequence) position: , mismatch: 9, identity: 0.7

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
tctcagtgtttaaaaatagaatattaaaaa	Protospacer
    **************.***.****.

115. spacer 2.22|327822|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028244 (Lactobacillus plantarum strain SRCM101518 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.7

tgtaaaagggacacaaaagggacaaatata	CRISPR spacer
ttcccaagggacaaaaaagggacaaaatgg	Protospacer
* .  ******** ************   .

116. spacer 2.22|327822|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054261 (Lactobacillus plantarum strain TCI507 plasmid unnamed2) position: , mismatch: 9, identity: 0.7

tgtaaaagggacacaaaagggacaaatata	CRISPR spacer
ttcccaagggacaaaaaagggacaaaatgg	Protospacer
* .  ******** ************   .

117. spacer 2.23|327888|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to CP048745 (Buchnera aphidicola (Aphis urticata) isolate AURT-53B plasmid pLeu, complete sequence) position: , mismatch: 9, identity: 0.7

agaaagtgtttaaaaataaaatgttaagtt	CRISPR spacer
tctcagtgtttaaaaatagaatattaaaaa	Protospacer
    **************.***.****.

118. spacer 2.25|328020|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MK448821 (Streptococcus phage Javan623, complete genome) position: , mismatch: 9, identity: 0.7

aattaagttaggagaacgatatgaagcgta	CRISPR spacer
ttttaatttaggagaacgatatggtttatc	Protospacer
  **** ****************.  ..*

119. spacer 2.26|328086|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to MN694471 (Marine virus AFVG_250M232, complete genome) position: , mismatch: 9, identity: 0.7

aagaacacatagtattagtaaagggtgttg	CRISPR spacer
ccaaacacatagtattagttaaggaaaatt	Protospacer
  .**************** ****. . *

120. spacer 2.28|328218|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041045 (Paracoccus sp. AK26 plasmid pAK1, complete sequence) position: , mismatch: 9, identity: 0.7

caacaaaaatgcaagctaaaaaatgggcta	CRISPR spacer
gggaagctatgcaagcgaaaaaatgggctg	Protospacer
 .. *.  ******** ************.

121. spacer 2.18|327558|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030242 (Moraxella bovis strain Epp63 (300) plasmid pMBO-1, complete sequence) position: , mismatch: 10, identity: 0.667

aattagctttttatttttaatatagccgta	CRISPR spacer
tttttgctttttatttttaatatttttaat	Protospacer
  ** ******************  ...

122. spacer 2.18|327558|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NC_010893 (Moraxella bovis Epp63 plasmid pMBO-1, complete sequence) position: , mismatch: 10, identity: 0.667

aattagctttttatttttaatatagccgta	CRISPR spacer
tttttgctttttatttttaatatttttaat	Protospacer
  ** ******************  ...

123. spacer 2.25|328020|30|CP029477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.667

aattaagttaggagaacgatatgaagcgta	CRISPR spacer
gcccccgtcaggagaacgatatgaagctgg	Protospacer
. ..  **.******************  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

73282 : 85223

Streptococcus_phage(28.57%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWM74549.1\|73282_75517_-	ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent	A0A068F3I8	Mycobacterium_phage	3.1e-84	32.8
AWM74550.1\|75776_75962_-	hypothetical protein	NA	NA	NA	NA
AWM74551.1\|76155_76866_+	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA
AWM74552.1\|76930_77794_+	2,5-diketo-D-gluconic acid reductase	A0A2H4PQR8	Staphylococcus_phage	3.1e-56	39.5
AWM74553.1\|77768_78575_+	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	4.2e-31	34.4
AWM76205.1\|78642_79920_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.2e-60	46.5
AWM74554.1\|80144_81155_-	D-2-hydroxyacid dehydrogenase	M1I4S0	Paramecium_bursaria_Chlorella_virus	2.7e-51	34.6
AWM74555.1\|81481_82309_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	2.2e-96	62.3
AWM74556.1\|82382_85223_+	NgoFVII family restriction endonuclease	A0A0A1ENT0	Lactobacillus_phage	1.3e-21	25.5

DBSCAN-SWA_2

1141414 : 1154522

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWM75441.1\|1141414_1142245_-	DegV family protein	A0A1X9I5J4	Streptococcus_phage	1.2e-46	38.2
AWM75442.1\|1142489_1143776_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	3.7e-106	51.7
AWM75443.1\|1143832_1144168_-	hypothetical protein	NA	NA	NA	NA
AWM75444.1\|1144190_1144520_-	hypothetical protein	NA	NA	NA	NA
AWM75445.1\|1144744_1147018_+	proton-efflux P-type ATPase	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	2.0e-46	26.8
AWM75446.1\|1147415_1147934_-	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	4.9e-17	31.4
AWM75447.1\|1148231_1148759_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.0e-26	41.9
AWM76252.1\|1148859_1151136_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	2.2e-77	34.1
AWM75448.1\|1151170_1153009_-	elongation factor 4	E4ZFJ7	Streptococcus_phage	2.1e-22	26.1
AWM75449.1\|1153379_1154522_-	molecular chaperone DnaJ	A0A0N9QPY2	Chrysochromulina_ericina_virus	5.4e-08	51.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage