CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP029559	Streptococcus sobrinus strain NIDR 6715-15 chromosome, complete genome	2 crisprs	DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,csm6,DinG	0	5	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP029559_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029559_1

448565-448648

Orphan

Consensus_repeat	Method
CCAGGCTGTTTTGACACTTGCTAGGCAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029559_1

>merge|CP029559|1|448565-448648|CRISPRCasFinder
CCAGGCTGTTTTGACACTTGCTAGGCAAGTTTCATTTCCAACTTTTGACAGTCTCCCAGACTGTTTTGACACTTGCTAGGCAAG

>CP029559|1|1|448565-448648|CRISPRCasFinder
CCAGGCTGTTTTGACACTTGCTAGGCAAG	TTTCATTTCCAACTTTTGACAGTCTC
CCAGACTGTTTTGACACTTGCTAGGCAAG

Protein	Signature genes	Signature genes Name	Protein_function
CP029559.1\|AWN61108.1\|450332_451088_-\|3-oxoacyl-ACP-reductase-FabG	unknown	unknown	gnl\|CDD\|183775
CP029559.1\|AWN61100.1\|441763_442540_-\|conjugal-transfer-protein-TraX	unknown	unknown	gnl\|CDD\|368639
CP029559.1\|AWN61099.1\|440526_441546_-\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
CP029559.1\|AWN61109.1\|451627_452353_+\|immunity-protein	unknown	unknown	gnl\|CDD\|367814
CP029559.1\|AWN61114.1\|454734_455853_+\|ribosome-biogenesis-GTPase-YqeH	unknown	unknown	gnl\|CDD\|237511
CP029559.1\|AWN61115.1\|455868_456240_+\|6-O-methylguanine-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|376440
CP029559.1\|AWN61112.1\|453892_453991_+\|type-I-toxin-antitoxin-system-Fst-family-toxin	unknown	unknown	unknown
CP029559.1\|AWN61116.1\|456286_456598_+\|ribosome-assembly-RNA-binding-protein-YhbY	unknown	unknown	gnl\|CDD\|224451
CP029559.1\|AWN61103.1\|444473_445916_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
CP029559.1\|AWN61097.1\|435983_436541_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
CP029559.1\|AWN61113.1\|454207_454735_+\|YqeG-family-HAD-IIIA-type-phosphatase	unknown	unknown	gnl\|CDD\|225090
CP029559.1\|AWN61110.1\|453187_453502_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|368240
CP029559.1\|AWN61102.1\|443007_444474_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572
CP029559.1\|AWN61104.1\|445916_446117_+\|hypothetical-protein	unknown	unknown	unknown
CP029559.1\|AWN61107.1\|449388_450264_+\|DUF3114-domain-containing-protein	unknown	unknown	gnl\|CDD\|337977
CP029559.1\|AWN61106.1\|448111_448330_+\|hypothetical-protein	unknown	unknown	unknown
CP029559.1\|AWN61105.1\|446840_447956_+\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|180482
CP029559.1\|AWN61098.1\|436661_437363_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
CP029559.1\|AWN61111.1\|453494_453755_-\|prevent-host-death-family-protein	unknown	unknown	gnl\|CDD\|376852
CP029559.1\|AWN61101.1\|442705_443008_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl\|CDD\|178810

Protein	Function_ID	Function_description	E-value
CP029559.1\|AWN61108.1\|450332_451088_-\|3-oxoacyl-ACP-reductase-FabG	gnl\|CDD\|183775	PRK12826, PRK12826, SDR family oxidoreductase.	1.15966e-94
CP029559.1\|AWN61100.1\|441763_442540_-\|conjugal-transfer-protein-TraX	gnl\|CDD\|368639	pfam05857, TraX, TraX protein. This family consists of several bacterial TraX proteins. TraX is responsible for the amino-terminal acetylation of F-pilin subunits.	1.18952e-21
CP029559.1\|AWN61099.1\|440526_441546_-\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	5.31462e-83
CP029559.1\|AWN61107.1\|449388_450264_+\|DUF3114-domain-containing-protein	gnl\|CDD\|337977	pfam11311, DUF3114, Protein of unknown function (DUF3114). Some members in this family of proteins with unknown function are annotated as cytosolic proteins. This cannot be confirmed.	1.2103e-97
CP029559.1\|AWN61115.1\|455868_456240_+\|6-O-methylguanine-DNA-methyltransferase	gnl\|CDD\|376440	pfam01035, DNA_binding_1, 6-O-methylguanine DNA methyltransferase, DNA binding domain. This domain is a 3 helical bundle.	4.8187e-12
CP029559.1\|AWN61116.1\|456286_456598_+\|ribosome-assembly-RNA-binding-protein-YhbY	gnl\|CDD\|224451	COG1534, COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Translation, ribosomal structure and biogenesis].	9.43411e-32
CP029559.1\|AWN61103.1\|444473_445916_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
CP029559.1\|AWN61113.1\|454207_454735_+\|YqeG-family-HAD-IIIA-type-phosphatase	gnl\|CDD\|225090	COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only].	5.37287e-85
CP029559.1\|AWN61110.1\|453187_453502_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|368240	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE. ParE is the toxin family of a type II toxin-antitoxin family. It is toxic towards DNA gyrase, but is neutralized by the antitoxin ParD. The family also encompasses RelE/ParE described in.	1.2862e-06
CP029559.1\|AWN61102.1\|443007_444474_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
CP029559.1\|AWN61097.1\|435983_436541_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	7.91982e-09
CP029559.1\|AWN61109.1\|451627_452353_+\|immunity-protein	gnl\|CDD\|367814	pfam04103, CD20, CD20-like family. This family includes the CD20 protein and the beta subunit of the high affinity receptor for IgE Fc. The high affinity receptor for IgE is a tetrameric structure consisting of a single IgE-binding alpha subunit, a single beta subunit, and two disulfide-linked gamma subunits. The alpha subunit of Fc epsilon RI and most Fc receptors are homologous members of the Ig superfamily. By contrast, the beta and gamma subunits from Fc epsilon RI are not homologous to the Ig superfamily. Both molecules have four putative transmembrane segments and a probably topology where both amino- and carboxy termini protrude into the cytoplasm. This family also includes LR8 like proteins from humans, mice and rats. The function of the human LR8 protein is unknown although it is known to be strongly expressed in the lung fibroblasts. This family also includes sarcospan is a transmembrane component of dystrophin-associated glycoprotein. Loss of the sarcoglycan complex and sarcospan alone is sufficient to cause muscular dystrophy. The role of the sarcoglycan complex and sarcospan is thought to be to strengthen the dystrophin axis connecting the basement membrane with the cytoskeleton.	3.19552e-05
CP029559.1\|AWN61114.1\|454734_455853_+\|ribosome-biogenesis-GTPase-YqeH	gnl\|CDD\|237511	PRK13796, PRK13796, GTPase YqeH; Provisional.	0
CP029559.1\|AWN61105.1\|446840_447956_+\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	gnl\|CDD\|180482	PRK06233, PRK06233, vitamin B12 independent methionine synthase.	2.22157e-136
CP029559.1\|AWN61098.1\|436661_437363_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	1.65538e-105
CP029559.1\|AWN61111.1\|453494_453755_-\|prevent-host-death-family-protein	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	7.40079e-07
CP029559.1\|AWN61101.1\|442705_443008_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl\|CDD\|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	8.74272e-34

>CP029559.1|AWN61106.1|448111_448330_+|hypothetical-protein
MARASSLATLLFHFQNSIDFDNEMSLKRADASKLLTRYKVVKHHKGLKRSGRPFLPEPENKKVRQEIGRRRQ
>CP029559.1|AWN61105.1|446840_447956_+|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase
MTKKYFEHVGSFLRPVELKEAREAFEAGKLSQEELTAVENRLITDLVDKQVAIGLEKITDGEFRRAYWHLDNFWGFDGVEHEHFGQGYLFHGEETGDDTAVLRGKLGFTKENHPFIAHYDFYKKLADERGVEAKITIPAPAQFLAELNRGKNAATVAEFYPSRQDFLRAIAEVYREEILALYETGARTVQLDDCTWGMLIDEDFWHTMAGAGFKKEDVIEEYLYVNNNAIKDLPSDLTINTHVCRGNFHSTYAAKGAYDDVAEAFFGRENARAYFLEYDNERSGGFEPLAAFKGLDKVAVLGLITTKDGQLEDKETIIQRIHEAAEILPLDQLWLATQCGFASTQEGNILTEEDQWKKLTLVKEIIDEVWG
>CP029559.1|AWN61104.1|445916_446117_+|hypothetical-protein
MGALLVYLIFFLPMLMISYCFSIFQHFRVKAIAKRGQELRLWARSLGIEENRGSRGVILYTHYINF
>CP029559.1|AWN61103.1|444473_445916_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MNFETIIGLEVHVELNTNSKIFSPSSAHFGENPNANTNVIDWSFPGVLPVMNKGVIDAGIKAALALNMDIHQTMHFDRKNYFYPDNPKAYQISQFDEPIGYNGWLEAQLDDGSIKKIRIERAHLEEDAGKNTHADDGYSYVDLNRQGVPLIEIVSEADMRSPEEAYAYLTTLKEIIQYTGISDVKMEEGSMRVDANISLRPYGQEEFGTKTELKNLNSFSNVRKGLEYEVERQAKILRSGGVIRQETRRYDEANKGTILMRVKEGAADYRYFPEPDLPIFEISDDWIEEMRDSLPEFAKDRRARYVSQYGLSDYDANQLTASKATSDFFEAAVGLGGDAKQVSNWLQGEVAQFLNSENKNLEDIQLTPDNLVEMLGLIEDSTISSKIAKKVFVHLAKNGDGARDYVEKAGLVQISDPEILIPIIHQVFADNEAAVADFKSGKRNADKAFTGFLMKATKGQANPQVALKLLAQELAKLKEE
>CP029559.1|AWN61102.1|443007_444474_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MSFNDKTIEELHDLLVKKEISATELTQATLEDINAREETIGSFITVAQEEALAQAKSLDEQGIDADNVLSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATAVANAKQKGMIVVGKTNMDEFAMGGSTETSYFKKTKNAWDQSKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAFNGVVGLKPTYGTVSRFGLIAFGSSLDQIGPFAQTVKENAQVLNAIASEDKKDSTSAPVRISDYTSKIGQDIKGMRIALPKEYLGKGIDPQIKDNVLAAAKQFEKLGAVVEEVSLPHSKYGVAVYYIIASSEASSNLQRFDGVRYGFRADDANSLEDIYVKTRSQGFGDEVKRRIMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFEKVFADYDLILGPTSPTVAFGLDTLNHDPVAMYLADLLTIPVNLAGLPGISLPSGFVDGLPVGLQLIGPKYGEETIYQAAAAFEAVTDYHKQRPKIFGGDH
>CP029559.1|AWN61101.1|442705_443008_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MKISEEEVRHVATLSKLAFSDEETTEFATTLTKIVDMVELLNEVDTTGVAITTTMADRRTVLRPDVAEEGTDRDQLFKNVPEAKDYYIKVPAILDDGGDA
>CP029559.1|AWN61100.1|441763_442540_-|conjugal-transfer-protein-TraX
MKKSIGLNTNQLKYIALSFMVLDSAFFAFPGLPAWLHLITRFVAPLFAYLTLEGFFHTRNRKRHLLRLWSVAILMQIGDFLSQLLLGKEHLINDNIFLTLALGYSFLYFWQKARDHDRPILNSVLGSLIFLAGLFLSLIGLPFGAMVITLEGGIPILTLMLIFWAFYGHRRKQLIVFGIWSVISFLILGPDMNVSAAPSFSVWFEMFCYNSDCMSFLFLPFLFLYNGQKGSSKPIHKWFFYIFYPLHLWILHLLAFFL
>CP029559.1|AWN61099.1|440526_441546_-|IS30-family-transposase
MSTTNCTTKQPYCHLSEVERGKIEAFLSEGVKPAEIARRLGRSRSTISREIKRGTTKQVKQVNGKKIYFDYYFADLAQRRYVEGRQGIDYLKLEKVSEHFLKAFEEAMKASPKVHSVDSFVYAYKEEHPSETVPSTKTLYNYSHQGLLAIKAIDLPKAVRLRKKTKKRSSTQKHLGVSIEERPETINDRSVFGHWEIDSVLGTQKAGEPSILTLVERKTRYAITAYLTGKTAATVNEAVKELMGLYPIKSITADNGSEFAALNELEGVQIYYAHAYSSYERGTNENFNGLLREFVPKGKSLKTLTAEDLAKATLAINQRPRRLLNYQTAKTLFGLAQTA
>CP029559.1|AWN61098.1|436661_437363_+|ABC-transporter-ATP-binding-protein
MAYIEMKHSYKRYQMGETEIIANNDISFEINKGELVIILGASGAGKSTVLNILGGMDSNDEGQVLIDGNNIAAFNQKQLTAYRRSDVGFVFQFYNLVPNLTAKENVELASEIVDDAKDAALTLHEVGLGSRLNNFPAQLSGGEQQRVAIARALAKNPKLLLCDEPTGALDYQTGKQILKLLQNMSHQKGTTVIIVTHNASLAPIADRVIYLHDAKVNAINTNDWPQDIDTLEY
>CP029559.1|AWN61097.1|435983_436541_-|TetR/AcrR-family-transcriptional-regulator
MTQKRHTQSKAKIKAAITELLLENNDFSSITIRQITEKANINRSTFYLHYQDKYDLIDKLMHEITDNLRKELNTNSATVKEGLIHSLTYLQSQQEFIKLIIGIAPVNFSQKTRHFISKLIETTPALFYDILNPDLPLPKDYMLTTYAASIESIYTHWVSTDNQASPEEVANMILTVRRFYQKNDD
>CP029559.1|AWN61107.1|449388_450264_+|DUF3114-domain-containing-protein
MPKIGSAAFWSGWKEVKNDKDPCRALRFVLDQLDLPQDLSGDLTENQALVAKFSPDLAPHDRFWSDLARQVRLVMKGKDFQEKTEFNRQLHQLRYVISSQQAQYVRQHYRKSGRTDQEALFAYLRANHLRPSLWDNARLHNKRQIKDGTFCFPDEQESYNIKVLLQFRTEFIIDGQGNFLNEVDAEKVTANGIINGASFNYGNTTKSHFRLDVCPVGPHDPAFRNQATKGYRSPNRTGRVRLARFWQERRTADFDRSLYNKNGGYAKDGQALISLIKQEKKAFKKALRARK
>CP029559.1|AWN61108.1|450332_451088_-|3-oxoacyl-ACP-reductase-FabG
MFQLTNQIAVVTGGAKGIGRGIASVLHQQGAKVIILDKDQAAGQATAKNLGADFYSFNVTDSQGIAQTFQMIAEKYGRLDILCSNIGIYPQAKIADMSEAEWDLIQTVNLKGTFLVVKAAAKIMRHQGYGRIVLTSSITGPITGYPGWAHYGSTKAGQLGFMRSAALEYAKAGITINAVQPGNVLTEGLKTQGESYLNEMKKTVPTHTLGAPEDIGTAVAFLASKEAHYITGQTIVVDGGQILPESFDAIL
>CP029559.1|AWN61109.1|451627_452353_+|immunity-protein
MEPLKEDEKKVLAIIALVFGGIALVTSWMPFINNASAVLAIIAFILGVIAFFINLKKKKVLSLLSIMIAVISFIIVLMTQASYVSTIDKALGSNDKPTSEKQEKKESSSISDSDDDKETYKVGEKITFKGKVEYTITSVEWTDERNEFEDKQPKKVLKVTYNVKNLSDDDYVIGSDFELYANGSKMESYPNENTFETISAGRSYQGATEHFAVNDDKKLELEIKPYLSFRGTPAIIPLESE
>CP029559.1|AWN61110.1|453187_453502_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MTKENYQLRFLPLFEKDLNAIVDYISQSLQNPRAAHRLLSAVEGAINDRLARPLAFPAYPSIHKRRHPYYYIRVKNLIIFYVVIGNTMEVRKILYSKRNFDDFL
>CP029559.1|AWN61111.1|453494_453755_-|prevent-host-death-family-protein
MINIRPVSDLRNKFPEIEETVIKSNDPVFLTKNGYGTMVLMSLEQYDDLTSNLEKKLDEADLVAEESSVRYNKDGLFKRVRSRIDD
>CP029559.1|AWN61112.1|453892_453991_+|type-I-toxin-antitoxin-system-Fst-family-toxin
MWKDLFLSIVAPTFVGIVLGLFSKWLNGKDDD
>CP029559.1|AWN61113.1|454207_454735_+|YqeG-family-HAD-IIIA-type-phosphatase
MSIEDYLPTFAVEAVYDLKPESLRKHGISAVLVDLDNTLIAWDNPDGTPELREWLDDMTEADIPVVVVSNNKHERVKRAVDPFHVDFISRAMKPFTRGINKAIERYNFNRDEVVLVGDQLMTDIRACHRAGIRSILVKPLVTSDAWNTKFNRARERRVLKKMTQKYGPIEYQKEI
>CP029559.1|AWN61114.1|454734_455853_+|ribosome-biogenesis-GTPase-YqeH
MEELYCIGCGAKIQSRDKEAPGYTPQSSIEKSQETGELYCQRCFRLRHYNEIVDVAISDDDFLKLLHEVGDSQALVVNVVDIFDFNGSVIPGLSRFVAGNDVLLVGNKKDILPKSVKDGKVTQWLTERAHEEGLRPVDVLLTSAQNGQAIKELIARIEELRAGRDVYVVGVTNVGKSTLINAIIKEITGNQEIITTSRFPGTTLDKIEIPLDDGSYIFDTPGIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNPSQTLFLGGLGRFDFLQGDKQGFTAYFDNNLKLHRTKLQGADDFYDRHAGGLLTPPSAKELANFPKLVRHEFTITSKTDLVFSGLGWVRILAKPDSPVVVVGWAPEGVGVMVRKALI
>CP029559.1|AWN61115.1|455868_456240_+|6-O-methylguanine-DNA-methyltransferase
MTQSSFIAPEKYAEAIRQIPYGKVVTLADLRAYLGQDDSAPFFSGVATLIVAWSEGDDPMPYWRVLKSGGEVNAKYPGGLEAQRELLEAEGHRIIQKGKTKLRYYVKDYQEKSYLFDVKKNLM
>CP029559.1|AWN61116.1|456286_456598_+|ribosome-assembly-RNA-binding-protein-YhbY
MTLTSKQRAFLNSQAHAMKPIVQVGKNGLNDQIKTSVRNALDARELIKIKLLQNTDENIHEVAEILEEEIGAQSVAKTGRVLTLYKQSAKKENRKLSQKVKEI

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Crispr_ID: CP029559_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029559_2

852543-853243

TypeI-E

I-C,I-E,II-B

Consensus_repeat	Method
GTTTTACCCGCACACGCGGGGGTGATCCT	PILER-CR
GTTTTACCCGCACACGCGGGGGTGATCCT	CRISPRCasFinder
GTTTTACCCGCACACGCGGGGGTGATCCT	CRT
GTTTTACCCGCACACGCGGGGGTGATCCTG	PILER-CR

11 spacers

DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

The CRISPR arrays of CP029559_2

>merge|CP029559|2|852543-853243|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTTTTACCCGCACACGCGGGGGTGATCCTAAAGTTCCTGTACAATTTCTGTACGTGTTTTCGTTTTACCCGCACACGCGGGGGTGATCCTGCAGGGGAGATGAGGCGTGTTAAATGCGAGGTGTTTTACCCGCACACGCGGGGGTGATCCTAGAATACCATCCACCTGAGTAGTAGCGAGAGGGTTTTACCCGCACACGCGGGGGTGATCCTGCTTTATCAAATGCTGCTGAGCAGTCTAGGCAGTTTTACCCGCACACGCGGGGGTGATCCTCAAAGGCCTTGTCAGGTAGGTATTTATCGGTGAGTTTTACCCGCACACGCGGGGGTGATCCTGGTCTATCTGGTCAAGGTTCTTGACAGAAGTAGTTTTACCCGCACACGCGGGGGTGATCCCGCCGGCAAAAGCTATTCATTCCTTTTAAATTTGTTTTACCCGCACACGCGGGGGTGATCCTGAGTTTACTTATCTCTGGTTGGTTAACAAGTAGTTTTACCCGCACACGCGGGGGTGATCCTGGTATTTTGACTGCTAGGTTTCATGGCTCGTCGTTTTACCCGCACACGCGAGGGTGATCCTATTTCCTCTCGGCCAAAGCAGTGAAACGGTTAGTTTTACCCGCACATGCGGGGGTGATCCTGGTTTTGGGGATGCTAACTGGTACGAATACTAGTTTTACCCGCACAGGCGGGTGTGGCATA

>CP029559|2|1|852543-852754|PILER-CR
GTTTTACCCGCACACGCGGGGGTGATCCT	AAAGTTCCTGTACAATTTCTGTACGTGTTTTC
GTTTTACCCGCACACGCGGGGGTGATCCT	GCAGGGGAGATGAGGCGTGTTAAATGCGAGGT
GTTTTACCCGCACACGCGGGGGTGATCCT	AGAATACCATCCACCTGAGTAGTAGCGAGAGG
GTTTTACCCGCACACGCGGGGGTGATCCTGCTTTATCAAATGCTGCTGAGCAGTCTAGGCAGTTTTACCCGCACACGCGGGGGTGATCCTCAAAGGCCTTGTCAGGTAGGTATTTATCGGTGAGTTTTACCCGCACACGCGGGGGTGATCCTG	GTCTATCTGGTCAAGGTTCTTGACAGAAGTA
GTTTTACCCGCACACGCGGGGGTGATCCCG	CCGGCAAAAGCTATTCATTCCTTTTAAATTT
GTTTTACCCGCACACGCGGGGGTGATCCTG	AGTTTACTTATCTCTGGTTGGTTAACAAGTA
GTTTTACCCGCACACGCGGGGGTGATCCTG	GTATTTTGACTGCTAGGTTTCATGGCTCGTC
GTTTTACCCGCACACGCGAGGGTGATCCTA	TTTCCTCTCGGCCAAAGCAGTGAAACGGTTA


>CP029559|2|2|852543-853243|CRISPRCasFinder
GTTTTACCCGCACACGCGGGGGTGATCCT	AAAGTTCCTGTACAATTTCTGTACGTGTTTTC
GTTTTACCCGCACACGCGGGGGTGATCCT	GCAGGGGAGATGAGGCGTGTTAAATGCGAGGT
GTTTTACCCGCACACGCGGGGGTGATCCT	AGAATACCATCCACCTGAGTAGTAGCGAGAGG
GTTTTACCCGCACACGCGGGGGTGATCCT	GCTTTATCAAATGCTGCTGAGCAGTCTAGGCA
GTTTTACCCGCACACGCGGGGGTGATCCT	CAAAGGCCTTGTCAGGTAGGTATTTATCGGTGA
GTTTTACCCGCACACGCGGGGGTGATCCT	GGTCTATCTGGTCAAGGTTCTTGACAGAAGTA
GTTTTACCCGCACACGCGGGGGTGATCCC	GCCGGCAAAAGCTATTCATTCCTTTTAAATTT
GTTTTACCCGCACACGCGGGGGTGATCCT	GAGTTTACTTATCTCTGGTTGGTTAACAAGTA
GTTTTACCCGCACACGCGGGGGTGATCCT	GGTATTTTGACTGCTAGGTTTCATGGCTCGTC
GTTTTACCCGCACACGCGAGGGTGATCCT	ATTTCCTCTCGGCCAAAGCAGTGAAACGGTTA
GTTTTACCCGCACATGCGGGGGTGATCCT	GGTTTTGGGGATGCTAACTGGTACGAATACTA
GTTTTACCCGCACAGGCGGGTGTGGCATA

>CP029559|2|1|852543-853243|CRT
GTTTTACCCGCACACGCGGGGGTGATCCT	AAAGTTCCTGTACAATTTCTGTACGTGTTTTC
GTTTTACCCGCACACGCGGGGGTGATCCT	GCAGGGGAGATGAGGCGTGTTAAATGCGAGGT
GTTTTACCCGCACACGCGGGGGTGATCCT	AGAATACCATCCACCTGAGTAGTAGCGAGAGG
GTTTTACCCGCACACGCGGGGGTGATCCT	GCTTTATCAAATGCTGCTGAGCAGTCTAGGCA
GTTTTACCCGCACACGCGGGGGTGATCCT	CAAAGGCCTTGTCAGGTAGGTATTTATCGGTGA
GTTTTACCCGCACACGCGGGGGTGATCCT	GGTCTATCTGGTCAAGGTTCTTGACAGAAGTA
GTTTTACCCGCACACGCGGGGGTGATCCC	GCCGGCAAAAGCTATTCATTCCTTTTAAATTT
GTTTTACCCGCACACGCGGGGGTGATCCT	GAGTTTACTTATCTCTGGTTGGTTAACAAGTA
GTTTTACCCGCACACGCGGGGGTGATCCT	GGTATTTTGACTGCTAGGTTTCATGGCTCGTC
GTTTTACCCGCACACGCGAGGGTGATCCT	ATTTCCTCTCGGCCAAAGCAGTGAAACGGTTA
GTTTTACCCGCACATGCGGGGGTGATCCT	GGTTTTGGGGATGCTAACTGGTACGAATACTA
GTTTTACCCGCACAGGCGGGTGTGGCATA

>CP029559|2|2|852849-853183|PILER-CR
	AAAGTTCCTGTACAATTTCTGTACGTGTTTTC
GTTTTACCCGCACACGCGGGGGTGATCCT	GCAGGGGAGATGAGGCGTGTTAAATGCGAGGT
GTTTTACCCGCACACGCGGGGGTGATCCT	AGAATACCATCCACCTGAGTAGTAGCGAGAGG
GTTTTACCCGCACACGCGGGGGTGATCCTGCTTTATCAAATGCTGCTGAGCAGTCTAGGCAGTTTTACCCGCACACGCGGGGGTGATCCTCAAAGGCCTTGTCAGGTAGGTATTTATCGGTGAGTTTTACCCGCACACGCGGGGGTGATCCTG	GTCTATCTGGTCAAGGTTCTTGACAGAAGTA
GTTTTACCCGCACACGCGGGGGTGATCCCG	CCGGCAAAAGCTATTCATTCCTTTTAAATTT
GTTTTACCCGCACACGCGGGGGTGATCCTG	AGTTTACTTATCTCTGGTTGGTTAACAAGTA
GTTTTACCCGCACACGCGGGGGTGATCCTG	GTATTTTGACTGCTAGGTTTCATGGCTCGTC
GTTTTACCCGCACACGCGAGGGTGATCCTA	TTTCCTCTCGGCCAAAGCAGTGAAACGGTTA
GTTTTACCCGCACATGCGGGGGTGATCCTG

Protein	Signature genes	Signature genes Name	Protein_function
CP029559.1\|AWN61438.1\|836386_836890_+\|thiol-peroxidase	unknown	unknown	gnl\|CDD\|179055
CP029559.1\|AWN61442.1\|847620_848217_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	mkCas0194_cse2gr11_CAS-I-E	gnl\|CDD\|378191
CP029559.1\|AWN61453.1\|864815_866225_+\|DUF438-domain-containing-protein	unknown	unknown	gnl\|CDD\|225301
CP029559.1\|AWN61457.1\|868753_869032_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|179841
CP029559.1\|AWN61448.1\|853377_854733_+\|divalent-metal-cation-transporter	unknown	unknown	gnl\|CDD\|234815
CP029559.1\|AWN61444.1\|849295_850021_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187886
CP029559.1\|AWN61454.1\|866300_867185_+\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235042
CP029559.1\|AWN61445.1\|850026_850677_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
CP029559.1\|AWN61446.1\|850673_851615_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP029559.1\|AWN61449.1\|854911_859021_+\|glucosyl-transferase	unknown	unknown	gnl\|CDD\|334895
CP029559.1\|AWN61439.1\|837175_837769_+\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|341201
CP029559.1\|AWN61456.1\|868347_868761_+\|transcriptional-regulator-Spx	unknown	unknown	gnl\|CDD\|179316
CP029559.1\|AWN61443.1\|848206_849286_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
CP029559.1\|AWN61455.1\|867187_868108_+\|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl\|CDD\|235536
CP029559.1\|AWN61447.1\|851616_852519_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|176648
CP029559.1\|AWN61440.1\|838207_842872_+\|glucosyltransferase	unknown	unknown	gnl\|CDD\|334895
CP029559.1\|AWN61450.1\|859326_863853_+\|glucosyltransferase	unknown	unknown	gnl\|CDD\|334895
CP029559.1\|AWN61451.1\|864101_864422_+\|hypothetical-protein	unknown	unknown	unknown
CP029559.1\|AWN61452.1\|864583_864814_+\|DUF1858-domain-containing-protein	unknown	unknown	gnl\|CDD\|378108
CP029559.1\|AWN61441.1\|845934_847608_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|378189

Protein	Function_ID	Function_description	E-value
CP029559.1\|AWN61438.1\|836386_836890_+\|thiol-peroxidase	gnl\|CDD\|179055	PRK00522, tpx, thiol peroxidase.	2.48174e-94
CP029559.1\|AWN61442.1\|847620_848217_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	9.95823e-39
CP029559.1\|AWN61453.1\|864815_866225_+\|DUF438-domain-containing-protein	gnl\|CDD\|225301	COG2461, COG2461, Uncharacterized conserved protein [Function unknown].	6.76096e-134
CP029559.1\|AWN61457.1\|868753_869032_+\|hypothetical-protein	gnl\|CDD\|179841	PRK04387, PRK04387, hypothetical protein; Provisional.	8.78149e-42
CP029559.1\|AWN61448.1\|853377_854733_+\|divalent-metal-cation-transporter	gnl\|CDD\|234815	PRK00701, PRK00701, divalent metal cation transporter MntH.	2.71313e-176
CP029559.1\|AWN61444.1\|849295_850021_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	3.76664e-45
CP029559.1\|AWN61454.1\|866300_867185_+\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235042	PRK02484, truB, tRNA pseudouridine synthase B; Provisional.	0
CP029559.1\|AWN61445.1\|850026_850677_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	5.81157e-69
CP029559.1\|AWN61446.1\|850673_851615_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	6.91835e-132
CP029559.1\|AWN61449.1\|854911_859021_+\|glucosyl-transferase	gnl\|CDD\|334895	pfam02324, Glyco_hydro_70, Glycosyl hydrolase family 70. Members of this family belong to glycosyl hydrolase family 70 Glucosyltransferases or sucrose 6-glycosyl transferases (GTF-S) catalyze the transfer of D-glucopyramnosyl units from sucrose onto acceptor molecules, EC:2.4.1.5. This family roughly corresponds to the N-terminal catalytic domain of the enzyme. Members of this family also contain the Putative cell wall binding domain pfam01473, which corresponds with the C-terminal glucan-binding domain.	0
CP029559.1\|AWN61439.1\|837175_837769_+\|restriction-endonuclease-subunit-S	gnl\|CDD\|341201	cd17520, RMtype1_S_HmoORF3075P-TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Heliobacterium modesticaldum Ice1 S subunit (S1.HmoORF3075P) TRD1-CR1. The recognition sequence of Heliobacterium modesticaldum Ice1 S subunit (S1.HmoORF3075P) is undetermined. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This subfamily also includes the TRD-CR-like sequence-recognition domain of type I N6-adenine DNA methyltransferase (M) subunit of Clostridium intestinale URNW (M2.CinURNWORF2828P). The recognition sequence of M2.CinURNWORF2828P is undetermined. Type I methyltransferases included in this group include two domains: one for methylation, and another (TRD-CR-like) for sequence-recognition.	6.12071e-45
CP029559.1\|AWN61456.1\|868347_868761_+\|transcriptional-regulator-Spx	gnl\|CDD\|179316	PRK01655, spxA, transcriptional regulator Spx; Reviewed.	6.24525e-83
CP029559.1\|AWN61443.1\|848206_849286_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	5.49918e-156
CP029559.1\|AWN61455.1\|867187_868108_+\|bifunctional-riboflavin-kinase/FAD-synthetase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	6.96068e-135
CP029559.1\|AWN61447.1\|851616_852519_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	9.47468e-40
CP029559.1\|AWN61440.1\|838207_842872_+\|glucosyltransferase	gnl\|CDD\|334895	pfam02324, Glyco_hydro_70, Glycosyl hydrolase family 70. Members of this family belong to glycosyl hydrolase family 70 Glucosyltransferases or sucrose 6-glycosyl transferases (GTF-S) catalyze the transfer of D-glucopyramnosyl units from sucrose onto acceptor molecules, EC:2.4.1.5. This family roughly corresponds to the N-terminal catalytic domain of the enzyme. Members of this family also contain the Putative cell wall binding domain pfam01473, which corresponds with the C-terminal glucan-binding domain.	0
CP029559.1\|AWN61450.1\|859326_863853_+\|glucosyltransferase	gnl\|CDD\|334895	pfam02324, Glyco_hydro_70, Glycosyl hydrolase family 70. Members of this family belong to glycosyl hydrolase family 70 Glucosyltransferases or sucrose 6-glycosyl transferases (GTF-S) catalyze the transfer of D-glucopyramnosyl units from sucrose onto acceptor molecules, EC:2.4.1.5. This family roughly corresponds to the N-terminal catalytic domain of the enzyme. Members of this family also contain the Putative cell wall binding domain pfam01473, which corresponds with the C-terminal glucan-binding domain.	0
CP029559.1\|AWN61452.1\|864583_864814_+\|DUF1858-domain-containing-protein	gnl\|CDD\|378108	pfam08984, DUF1858, Domain of unknown function (DUF1858). This domain has no known function. It is found in various hypothetical bacterial proteins.	1.44722e-15
CP029559.1\|AWN61441.1\|845934_847608_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	1.7905e-83

>CP029559.1|AWN61447.1|851616_852519_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MPFTVITVKNAPPSLRGDLTKWMQEIATGVYVGNFNTKVREQLWNRVENSVGHGEATISYSFRNEIGYQFATINAQREVVDYDGIPLVLLPSQAKDVGKNVALGFSNAAKFRKIKRYTSSSQSHVQSTVPYAVIDIETDGLDENEHTIIEIAAVKVSGLQIEDFDYLIKYDKVLPKNIVSLTGISQELLNQNGKDIQVVLQEFLNFIGDFDLVGYGVGFDIKFINNELRKLGYPLLENKVHDLMKYVKNEKLFLDNYKLQTALKVYGIEGEVPHRALPDSRLIYQLSTKVNKFLKRINQK
>CP029559.1|AWN61446.1|850673_851615_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MKEKFGAKKTSLKELPKISDRVSFIYVEHAKINRVDSAITVADSKGIVRIPAAMLGVLLLGPGTDISHRAVELIGDTGTSMIWVGEHGVRQYAHGRSLAHSTRFLEKQAKLVSNSRSRLRVARKMYQMRFPNEDVSGLTMQQLRGREGARIRKVYSLQAKKYNIPWTKRDYNPENFEDGTPVNQALSAANVALYGLVHSIIVALGASPGLGFVHTGHDLSFVYDVADLYKAETTIPIAFEIAANCQPGDDIGKITRLKVRDSFVDGKLMIQIVKDLQNLLDIEESEELVVDILALWDDKERLVKHGVSYREDS
>CP029559.1|AWN61445.1|850026_850677_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYISRVEIDKNNRRKIKDLKNIESYHGWVEQSFPKEIEQNIRTRKLWRVDQLQGHYYLIIISLEKPDLKLLEKYGVRNSAQTKSYDTFLNSLKEGEVMRFRVVLNPVISLPSRDGNHKRGVVKPHTTIKHQMNYLLNRSEKNGFLLEKDDFSIVERGYEVFNKGNSKPIRLIKAIYEGILTIDDADLFRKTLTEGIGKKKAYGFGMMTAIPLGDEK
>CP029559.1|AWN61444.1|849295_850021_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKTILLKLAGPLQSWGTSSHFETRHTDFYPSKSAIIGLIAASLGYRRDEEQRLQRLNELDFAVRIDQQGNILRDYHIAQKYKSKGEFERTYVTNRYYLEDAIFIVAISHEDDELMSAIEKGLKNPYFQTFMGRRSLPLNADFIVETTSDSALESLKRLKWQAAEWFMSKHSHETSITLEIYADSFLSDKESNRLRQDRVISFSQKARKFGFRYEVRDLVDVSNPMAKKGETQHDIFSSIGD
>CP029559.1|AWN61443.1|848206_849286_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTNNQHLFLDIHAIQTLPPSNINRDDTGSPKTAQYGGVRRARVSSQSWKRAIREYFSDNGQQSNVGVRTKDIVRYVADKIIGLDQSISLEDALQKADKVLNGAGVKTKDFKAKALFFLSDVQAKKLAQAAINDVSDKKELHEVLTSSPAIDIALFGRMVADDPSLNEDASSQVAHAISTHAVQTEFDFYTAVDDLAPEDNAGAGMLGTIEFNSSTLYRYANVAVHELLKQLGDKESLVNSLSLFIEAFAKSLPTGKATSFANQTLPQALVVTLRNDRPISLVSAFEKPVKSSEGYVTKSIEKLSDEFVKVEKFVNKPVLTFYVSLEDVEKLKNVGGIEKNSLSELLSDFSEELSNFIQE
>CP029559.1|AWN61442.1|847620_848217_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSEQRKARVAEVTRKILIKLSKQKDTSSGKALLARLRQSIGKPVSETVAVWPILFEDLPEEFLGHDGYTSAEEQAILTTLQLYALHQQSLSHSVFIGEENKYQNIGNSFRQLRQGEDTTAIDRRFNVMITASTFEELVYHLRHLITLLKSKSPETKVDYARLSEDLYWFLRDYQERVRLSWARDYYKRNFKGEKDNDK
>CP029559.1|AWN61441.1|845934_847608_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MSRFNLLDEPWLSVVVDDKGSTKEVSLLDLFINAHQYKDLAGDTKTQDFAVLRVLLAVLHTVFSRFDADGNPYDYLEIDERFRQIEEVEEDDIDKYEEDLYDTWTNLWEQGKFPEIISQYLEKWRDRFYLFDDDYPFFQVKMKVLQKKFDLSNKLGELTGKTMNRLISESGNKAALFSPRADLDNNKEKLSEPEIVRWLLTYHSSTEVGGRLKSLGSTTSSGWLFRKGGIYFKGTNLFETLLMNCILPYKEYNNLKHTQKPCWEYEYLEIIQNYFDEVEPDNIASLYTTWSKGVDIDAKLNLPYFKCNIIKLPSINCEDYFLEPMTLWKYQDKIGKFIPKEHTINQSLWRSFGLLTENSSGKNYRTPGVINWFREIKNEIAKDKLVSICAVGVEMKSDANHTISDEITDYLFINEFVLADLEEGGWIPRINDTVEETKKVISRTYKRYIDDIKEIRKARSDLFTSQKVEELYFKIDQPFRQWLASLQPNDEKDTRVLEWREILDELVREEAELTLHSGGPRDYIGIVKRDPNKDSSEFINIATAYNKFNYCLNQNLK
>CP029559.1|AWN61440.1|838207_842872_+|glucosyltransferase
MEKKLHYKLHKVKKHWVTIAVASIGLVSLVGAGTVSAEDKVANDTTAQATVGVDTGQGQATTNDANTNTTDTDTSDQSANTNQDQAGSNQSNNQDQAKQDTANTDQNQADNSQTDNNQATDQATSPATDGTSVQRRDAANVATAADQEGQTDPSEQEKSAALSLDNVKLIDGKYYYIQADGSYKKNFAITVNGQMLYFDSDTGALSSTSTYSFSQGTTNLVDDFSSHNKAYDSTAKSFELVNGYLTANSWYRPVDILRNGQTWEASNENDLRPVLMSWWPDKDTQVAYVNYMNKYLSANETEVTNETSQVDLNKEAQSIQTKIEQKITSDNSTQWLRTAMEAFVAAQPKWNMSTENFNKGDHLQGGALLYTNSDLTPWANSDYRLLNRTPTQQDGTKKYFTEGGEGGYEFLLSNDVDNSNPVVQAEQLNQLHYLMNWGDIVLGDKDANFDGVRVDAVDNVNADLLQVYSNYFKDNYKVTDSEANALAHISILEAWSLNDNQYNEDTNGTALSIDNSSRLTSLAVLTKQPGQRLDLSNLISESVNKERANDTAYGDTIPTYSFVRAHDSEVQTVIAKIVKEKIDTNSDGYTFTLDQLKDAFKIYNEDMAKVNKTYTHYNIPAAYALLLSNMESVPRVYYGDLYTDDGQYMAKKSPYYDAIATMLQGRIAYVSGGQSEEVHKVNGNNQILSSVRYGQDLMSADDTQGTDLSRTSGMVTLVSNDPNLNLGSDSLTVNVGKAHANQAYRPLILGTKDGVQSYLKDSDTNIVKYTDANGNLTFTADDIKGYSTVDMSGYLAVWVPVGAKDGQDVRVAADTNQKADGKSLKTSAALDSQVIYEGFSNFQDFANNDADYTNKKIAENADFFKKLGITSFEMAPQYVSATDGSFLDSIIENGYAFSDRYDLAMSKNNKYGSKDDLANALKALHANGIQAIADWVPDQIYQLPGEEVVTAKRTNSYGKPTFDAFINNTLYAANTKSSGSDYQAQYGGAFLDELKAKYPDMFSVNMISTGKPIDSSTKIKQWEAKYFNGTNVLGKGAGYVLSDDATGKYFTVNENGDFLPASFTGDQNAKTGFYYDGTGMTYYSTSGNKAVDSFVYEGGHYYYFDKDGHMVTGSYKAVDGNDYYFLPNGIQMRDAIYQDDKGNSYYYGRTGILYKGDNWYPFTDPKNSNKTVFRYFDANNVMAIGYKDMYGQTYYFDENGYQAKGELLTDAKGTHYFDEDNGAMAKNKFVNVGDDWYYMDGNGNAVKGQYPVDNQILYFNPETGVQVKGQFITDAQGRISYYDGNSGALKSSGFFTPNGSDWYYAENGYVYKGFKQVAENQDQWYYFDQTTGKQAKGAAKVDGRDLYFNPDSGVQVKGDFATDESGNTSFYHGDNGDKVVGGFFTTGNNAWYYADNNGNLVKGFQEIDGKWYHFDEVTGQQAKGAALVNGQQLYFDVDSGIQVKGDFVTDGQGNTSYYDVNSGDKKVNGFFTTGDNAWYYADGQGNLAKGRKSIDNQDLYFDPATGKQVKGQLVSIDGRNYYFDSDSGNMAKNRFVRIGDQWIYFGNDGAATNL
>CP029559.1|AWN61439.1|837175_837769_+|restriction-endonuclease-subunit-S
MKLIEDYLANPVKKLPLGQVARAFKGKAVSGKADPGRISYINLSDMTEFGIDYDHLKTFDDEQDKLQKYLLETGDVLVASKGTVKKVAVFEGQDFPIVASSNITVLRPIEELNGFYLKLFLESDLGQALIDTADKGKAVLNISTAQLLEIPVPQIPLVKQNYLVQYAYKGQADYERKLARAQQEWEHIKQEVAKNLF
>CP029559.1|AWN61438.1|836386_836890_+|thiol-peroxidase
MPTFFGEPVTIAIDKQFQVGDIAPDFTLMASDLSQKSLSDFAGKKKVLSIVPSIDTGVCSTQTRIFNKELSELADTVVITVSADLPFAQEKWCGVQGLDEAIMLSDYYDNHFGQAYGVLMEEWHLLARAVLVLDEKNKITYTQYLDNINSEPDYQAAIAAVKALKSL
>CP029559.1|AWN61448.1|853377_854733_+|divalent-metal-cation-transporter
MESPKNNYRANKASLSEVNQSVAVPETASFWRTLKAFIGPGALVAVGYMDPGNWITSVVGGASYKYLLLSVVLISSLMAMQLQQMAGKLGIVTRQDLAQATANHLPVWLRYILFVIIELALMATDLAEVIGSGIALHLLFGWPLMLSIFVTILDVFLLLGLMKLGFRKIEAVVSTLIMTILLIFVYLTVISQPSISGIFKGFVPSASIFDLQQTGANSKLTLALGIIGATVMPHNLYLHSSISQTRRVDYDNPESIRRAVRFMTWDSNIQLSLAFIVNSLLLILGAALFYGHASEISAFAQMYNALADPKIAGSVASGLLSTLFAVALLTSGQNSTITGTLTGQIVMEGFVHLRLPQWFIRLVTRLLALLPVILAALIWGSREKVLDQLIVYSQVFLSLALPFSIFPLIYFTSSKKLMGEHKNAIWNTALAYGVAVILTILNIKLIIDLFQ
>CP029559.1|AWN61449.1|854911_859021_+|glucosyl-transferase
MEKNLRYKLHKVKKQWVAIGVTTVTLSFLAGGQVVAADTNNNDGTSVQVNKMVPSDPKFDAQAQNGQLAQAMFKAANQADQTATSQVSPATDGRVDNQATPAANQPAANVANQDVANQAANAGDLNRQSAADTSTDGKALPQTKDQPGHLETVDGKTYYVDANGQRLKNYSTVIDGKTYYFDGQTGQAQTDLPKTGQDNQQNVPDSYVANNQAYSNEASSFEAVDNYLTADSWYRPRKILKNGQSWQASSEGDLRPILMTWWPDAATKAAYANFWAKEGLISGSYRQNSANLDAATQNIQVAIEKKIAAEGNTNWLRDKMSQFVKLQNQWNSASEDKTDYPNQDHLQGGALLFSNSDATPQANSDWRLLNRNPTNQTGQQKYFKTNYAGYELLLANDVDNSNPIVQAEQLNQFHYLMNWGEIVMNDKDANFDGVRVDAVDNVDADLLQIQRDYYKARYGTDQNEKNAIDHLSILEAWSGNDNDYVKDQNNFSLSIDNDQRSYMLAAFANPANKRGNYLGQLATVGLKNRTGNNNSDPVPNYVFIRAHDSEVQTRIAKIIREKLGKTNADGLTNLTLDDLNKAFDIYNQDMNSVDKQYYPNNLPMAYAWMLQNKDTVTRVYYGDMYTDNGQYMETKTPFYNAIEALLKGRIKYVAGGQAVGYNQWNRVLTSVRYGKGANSINDAGDATTRNSGMALLINNQPNFRANSNITLNMGAAHRNQAYRPLLLSTQNGTATYLNDSDVNSSQYKYTDGQGRLTFNASEFRGVSNVQVSGMIQVWVPVGAAADQDVRTAPSTSATRDGNIYHQSDALDSQVIYEGFSNFQAFAQNPDQYTNAVIAKNADLFKSWGITQFEMAPQYVSSEDGTFLDSVIFNGYAFSDRYDLAMSKNNKYGSKQDLANAIKGLHAAGIKVLADWVPDQMYNLPGKEVVTATRVDEYGRTRSGATINKTPYVVNTKTYGDYQEQYGGKFLNDLQKLYPSLFTTKQISTGKPIDPSVKITNWSAKYFNGSNILGRGAKYVLSEGNKYLNLTGGKLFLPTVLNNTYGQPQASSKGFVSKADGIHYLDENGQEVKNQFKEIAGSWYYFDANGKMATGQTKVGDDTYLFMPNGKQLKEGILYDGNKAYYYDNNGRTWTNKGFVEFRVNGQDKWRYFNGDGSIAIGLVTLDNRTLYFDAYGYQVKGQTVTINGKSYTFDADQGDLEKTDNQDNPNPAPDNQGGWESLGDNQWGYRRNGKLLTGHQTIDGHQVFFQDNGVQVKGGTAKDASGVLRFYDRDQGRQAGKGWYSTSDNNWVYVDDSGKVLTGLQDINGQTVYFDENGIQAKGKGVWDNNGGLRYFEADSGNMIRDRWKNVDGTWYYFNRDGLASYYRW
>CP029559.1|AWN61450.1|859326_863853_+|glucosyltransferase
MERKLHYKLHKVKKQWVTIAVASAGLASIVGAGSVGQTVSADDLAQDQSSASEQKAASDQKQEEVASDAANTASAKVTSEKEVSQASDTTSESSQVQSQDQASAKQASDLAPATKAAPQAESQAGTSTASSEAAPAASSQEVAKSTTGSVSQNEEAAALSLANIKKIDGKFYYVMADGSYKKNFAITVDGQMLYFDAKTGALSSTSTYSFSQGLTPIVSDFSVNNKAFDSSEKSFELVDGYLTAESWYRPAKILENGKTWVDSKETDLRPVLMSWWPNKDTQVAYLNYMSKALGGKEEFTTETSQLTLNTAAELIQAKIEARVSKEQGTKWLREAMAAFVATQSRWNKDSEQYDKADHLQGGALLYTNNNLTEWANSNWRLLNRTPTRQDGKTHYSKADKYGGYEFLLANDVDNSNPVVQAEMLNQIHYLMNWGEIVMGDKNANFDGIRVDAVDNVNADTLQLYTNYFNSVYGVNKSEAQALAHISVLEAWSYNDNDYNQDTNGAALAMDNGLRFSLLYTLTRPINERTPGMSTLIKSEYGLTDRTKNDKYGDTQPSYVFVRAHDSEVQTVIAQIIKEKIDPTTDGFTFTLDQLKQAFEIYNKDMNSVNKHYTHYNIPAAYAVMLSNMESVTRVYYGDLFTDDGQYMASKSPYYDAINTLLRARIRYAAGGQIMEHNSYKPSAAMKAAHPDAGNVLGNSEVLVSVRFGQDVMSADDMTGGKLAKTSGMFTLISNNPELELDVNEEIKVNVGKIHAGQAYRPLLLTTDKGLQKYLNDSDTKLTKVADKDGFITFKGSEIKGYKQVEVNGYLSVWVPVGAKADQDIRVAPSTAAKGEKAKTYTASQALESQLIYEGFSNFQDFVQKDSQYTNKKIAENTDLFKAWGVTSFEMAPQYVSATDGTFLDSIIENGYAFTDRYDLAMSKNNKYGSKEDLANALKALHAAGIQAIADWVPDQIYQLPGKEVVTASRVDNYGRVKVDQPLVEKLYLANTKSSGKDFQAKYGGEFLAELQKKYPEMFTTKMISTGKTIDPSVKLKEWSAKYFNGTNVLDRGTDYVLSDEGTGKYFTVNENGDFLPASLTGNKDAKTGFYNDGKGIVYYTTAGNKAKSAFVTEAGNTYYFDYTGHMVTGPNVINTKFYYFLPNGVMLKDAIKQDEKGRSVYYGKTGVMYKGGRDNEWFAMTDSKGQMRFRHFDNYGFMSMGLVTIHGNVQYYDEEGFQVKGEFVTDKDGQTRYFDQGSGNLVKGQFLNKDGNWYYLDDQGLVAKGAQTIKGQKLYFDTKTGVQVKGDFVTDKDGNTFFYSGDTGDLILGQFFSTGNNAWFYADENGHVAKGAKTIRGQKLYFDTKTGQQAKGRFIRDDKGVRYYDADTGTLVTNAFLETKAGSNQWYYMGADGYAVKGNQTIKNQHMHFDAETGQQAKGIIVTDANGRKYFYDTFTGSRVVNQFVLVNGNWYFFGYDGAAVTGFHDIKGQHLYFNSDGTQAKGTTVKIGNRSYTFDAHTGELTSVHYG
>CP029559.1|AWN61451.1|864101_864422_+|hypothetical-protein
MKSPIKKILFTSALVAAIFAAGSSVSALGVTETNRYGRAENPNLHRTFYDYNVHNMDINGNPIQEQGTDFSQYYWRGDESGSTTSYDENTHVTTTITYTVRYWEAK
>CP029559.1|AWN61452.1|864583_864814_+|DUF1858-domain-containing-protein
MTNTIDLSRPVAEILEEHPELKDILLELGFKPLANPLMLKTLGRTTSLKAGSKLAKIPLEKIKQTLEFNGYEVKGD
>CP029559.1|AWN61453.1|864815_866225_+|DUF438-domain-containing-protein
MAEERIEILKDILLDLHQGSSPEAVQERFDRTFKGVSALEISLMEHELMSDEKSGVTFEDVMDLCDVHANLFKNAVQGVEVADSDQPGHPVYVFKQENLALRGALLRIRRLLENLAQPENEEFQTDILKGLKNQIRLLGQFRRHYQRKEELFFPIMESYGHDSPPRVMWGVDDEIRQLFKDFQTKVEELPALEISIVRQSFEAFADEFEQMIFKEESILLMILLEIFTQDDWLKIAEESEAVGYAIVKPEEVWIPKRESFEPNQPSPADSNQLERDSKVVDEQTSKQSQANNPRPLDWDATNKQEQIIETPAGQFTLTFEPRKEALDRQVPQKFTNGYLSLDQANLILDHLPLEVTFVNKDDIFQYYNNSVSAKDMIFKRVPSQIGRNVELCHPPRVLDKVKKVFELLKTGQKDKVTMWFKSQKKGKFVYVTYAAVRDQAGEFQGVLEYVQDIQPFFDLEGDSQRDIID
>CP029559.1|AWN61454.1|866300_867185_+|tRNA-pseudouridine(55)-synthase-TruB
MINGIINLKKEAGMTSHDAVFKLRKILGEKKIGHGGTLDPDVTGVLPIAVGKATRVLEYMTESGKVYEGQITLGYSTTTEDASGELVRETPVTQEQLTEEAVDQAMATFLGEITQVPPMYSAIKVNGRRLYDYARAGEEVERPHRQVTISEFARISPLSFENGLCRFDFRVACSKGTYVRTLAVDLGVELGLASHMSALRRTASAGLVLEKSFSLAEIADQLERGEADFLLPLEYGVLDLPRVELEKAQKTEISFGRFIRLDSQEAILAAFYEDRVQAILERRGYLYKPRKVLI
>CP029559.1|AWN61455.1|867187_868108_+|bifunctional-riboflavin-kinase/FAD-synthetase
MMKIIEIDSYQAIEQEEATVLVLGYFDALHRGHKVLFDKAREIAKRDQLKIAVLTFFESPKLAFARFEPDLLKHITYPEKRYAKFADYGVDYLYLTNFTTAFSQISSDDFIKDYLGQLKAKAVVVGFDYKFGHNRTDADYLARNFSGPVYTVAEVSQDGQKISSTRIRHLIAQGDVAKVNQLLGYEFSTRGIVVHGDARGRTIGFPTANLATLDRTFLPADGVYVTDVLLKGQRYRAMTSIGKNVTFGGTELRLEANIFDFSGDIYGEELEIIWLNKIREMVKFNGIDDLVDQLHQDQKIAKEWTL
>CP029559.1|AWN61456.1|868347_868761_+|transcriptional-regulator-Spx
MITLFLSPSCTSCRKARSWLTNHEVAFQEHNIITSPLSADELRAVLALTENGTEDIISTRSKVFQKLDLDVDDLSISELIDLIAKNPSLLRRPIILDKKRMQIGFNEDEIRAFLPRHYREQELRQATIRAELESDHD
>CP029559.1|AWN61457.1|868753_869032_+|hypothetical-protein
MTKNYSYPLDASWSTEEIASVLYFLNQVEAAYESKAKTETLLEAYRSFKRVVPSKMQEKQIDREFEKSSGYSSYRAVQAARINAGGWVSLER

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP029559_1	1.1\|448594\|26\|CP029559\|CRISPRCasFinder	448594-448619	26	NZ_CP053834	Arcobacter cloacae strain LMG 26153 plasmid pACLO, complete sequence	159084-159109	6	0.769
CP029559_2	2.11\|853183\|32\|CP029559\|CRISPRCasFinder,CRT	853183-853214	32	MN694191	Marine virus AFVG_250M444, complete genome	25897-25928	8	0.75
CP029559_2	2.11\|853183\|32\|CP029559\|CRISPRCasFinder,CRT	853183-853214	32	MN694065	Marine virus AFVG_250M443, complete genome	30835-30866	8	0.75
CP029559_2	2.3\|852694\|32\|CP029559\|PILER-CR,CRISPRCasFinder,CRT	852694-852725	32	NC_031062	Erwinia phage vB_EamP_Frozen, complete genome	17077-17108	9	0.719
CP029559_2	2.3\|852694\|32\|CP029559\|PILER-CR,CRISPRCasFinder,CRT	852694-852725	32	KX098391	Erwinia phage vB_EamP_Gutmeister, complete genome	13100-13131	9	0.719
CP029559_2	2.3\|852694\|32\|CP029559\|PILER-CR,CRISPRCasFinder,CRT	852694-852725	32	KX098390	Erwinia phage vB_EamP_Rexella, complete genome	16892-16923	9	0.719
CP029559_2	2.3\|852694\|32\|CP029559\|PILER-CR,CRISPRCasFinder,CRT	852694-852725	32	KF806588	Erwinia phage Ea9-2, complete genome	17499-17530	9	0.719
CP029559_2	2.12\|852879\|31\|CP029559\|PILER-CR	852879-852909	31	NC_008043	Ruegeria sp. TM1040 megaplasmid, complete sequence	336350-336380	9	0.71
CP029559_2	2.6\|852878\|32\|CP029559\|CRISPRCasFinder,CRT	852878-852909	32	NC_008043	Ruegeria sp. TM1040 megaplasmid, complete sequence	336350-336381	10	0.688
CP029559_2	2.11\|853183\|32\|CP029559\|CRISPRCasFinder,CRT	853183-853214	32	LC494302	Escherichia phage SP27 DNA, complete genome	312993-313024	10	0.688
CP029559_2	2.11\|853183\|32\|CP029559\|CRISPRCasFinder,CRT	853183-853214	32	MK817115	Escherichia phage vB_EcoM_phAPEC6, complete genome	163545-163576	10	0.688
CP029559_2	2.11\|853183\|32\|CP029559\|CRISPRCasFinder,CRT	853183-853214	32	NC_027364	Escherichia phage PBECO 4, complete genome	317674-317705	10	0.688
CP029559_2	2.11\|853183\|32\|CP029559\|CRISPRCasFinder,CRT	853183-853214	32	MH383160	Escherichia phage UB, complete genome	30812-30843	10	0.688
CP029559_2	2.11\|853183\|32\|CP029559\|CRISPRCasFinder,CRT	853183-853214	32	MK327931	Escherichia phage vB_EcoM_G17, complete genome	188849-188880	10	0.688
CP029559_2	2.11\|853183\|32\|CP029559\|CRISPRCasFinder,CRT	853183-853214	32	LT603033	Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I	254502-254533	10	0.688
CP029559_2	2.11\|853183\|32\|CP029559\|CRISPRCasFinder,CRT	853183-853214	32	KM507819	Escherichia phage 121Q, complete genome	313629-313660	10	0.688

1. spacer 1.1|448594|26|CP029559|CRISPRCasFinder matches to NZ_CP053834 (Arcobacter cloacae strain LMG 26153 plasmid pACLO, complete sequence) position: , mismatch: 6, identity: 0.769

tttcatttccaacttttgacagtctc	CRISPR spacer
tttcatttacaacttttgacatctct	Protospacer
******** ************ ....

2. spacer 2.11|853183|32|CP029559|CRISPRCasFinder,CRT matches to MN694191 (Marine virus AFVG_250M444, complete genome) position: , mismatch: 8, identity: 0.75

ggttttggggatgctaactggtacgaatacta	CRISPR spacer
tatacttgggatgataactggtacgaagacga	Protospacer
 .* .* ****** ************* ** *

3. spacer 2.11|853183|32|CP029559|CRISPRCasFinder,CRT matches to MN694065 (Marine virus AFVG_250M443, complete genome) position: , mismatch: 8, identity: 0.75

ggttttggggatgctaactggtacgaatacta	CRISPR spacer
tatacttgggatgataactggtacgaagacga	Protospacer
 .* .* ****** ************* ** *

4. spacer 2.3|852694|32|CP029559|PILER-CR,CRISPRCasFinder,CRT matches to NC_031062 (Erwinia phage vB_EamP_Frozen, complete genome) position: , mismatch: 9, identity: 0.719

agaataccatccacctgagtagtagcgagagg	CRISPR spacer
cacgtaccatccacctgagcagtagggatatc	Protospacer
 . .***************.***** ** *

5. spacer 2.3|852694|32|CP029559|PILER-CR,CRISPRCasFinder,CRT matches to KX098391 (Erwinia phage vB_EamP_Gutmeister, complete genome) position: , mismatch: 9, identity: 0.719

agaataccatccacctgagtagtagcgagagg	CRISPR spacer
cacgtaccatccacctgagcagtagggatatc	Protospacer
 . .***************.***** ** *

6. spacer 2.3|852694|32|CP029559|PILER-CR,CRISPRCasFinder,CRT matches to KX098390 (Erwinia phage vB_EamP_Rexella, complete genome) position: , mismatch: 9, identity: 0.719

agaataccatccacctgagtagtagcgagagg	CRISPR spacer
cacgtaccatccacctgagcagtagggatatc	Protospacer
 . .***************.***** ** *

7. spacer 2.3|852694|32|CP029559|PILER-CR,CRISPRCasFinder,CRT matches to KF806588 (Erwinia phage Ea9-2, complete genome) position: , mismatch: 9, identity: 0.719

agaataccatccacctgagtagtagcgagagg	CRISPR spacer
cacgtaccatccacctgagcagtagggatatc	Protospacer
 . .***************.***** ** *

8. spacer 2.12|852879|31|CP029559|PILER-CR matches to NC_008043 (Ruegeria sp. TM1040 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.71

gtctatctggtcaaggttcttgacagaagta	CRISPR spacer
aattatctgatcaaggttcatgacagcccaa	Protospacer
. .******.********* ******    *

9. spacer 2.6|852878|32|CP029559|CRISPRCasFinder,CRT matches to NC_008043 (Ruegeria sp. TM1040 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.688

ggtctatctggtcaaggttcttgacagaagta	CRISPR spacer
caattatctgatcaaggttcatgacagcccaa	Protospacer
 . .******.********* ******    *

10. spacer 2.11|853183|32|CP029559|CRISPRCasFinder,CRT matches to LC494302 (Escherichia phage SP27 DNA, complete genome) position: , mismatch: 10, identity: 0.688

ggttttggggatgctaactggtacgaatacta	CRISPR spacer
gacccgatggatgctaactggtatgaaaactt	Protospacer
*.... . ***************.*** ***

11. spacer 2.11|853183|32|CP029559|CRISPRCasFinder,CRT matches to MK817115 (Escherichia phage vB_EcoM_phAPEC6, complete genome) position: , mismatch: 10, identity: 0.688

ggttttggggatgctaactggtacgaatacta	CRISPR spacer
gacccgatggatgctaactggtatgaaaactt	Protospacer
*.... . ***************.*** ***

12. spacer 2.11|853183|32|CP029559|CRISPRCasFinder,CRT matches to NC_027364 (Escherichia phage PBECO 4, complete genome) position: , mismatch: 10, identity: 0.688

ggttttggggatgctaactggtacgaatacta	CRISPR spacer
gacccgatggatgctaactggtatgaaaactt	Protospacer
*.... . ***************.*** ***

13. spacer 2.11|853183|32|CP029559|CRISPRCasFinder,CRT matches to MH383160 (Escherichia phage UB, complete genome) position: , mismatch: 10, identity: 0.688

ggttttggggatgctaactggtacgaatacta	CRISPR spacer
gacccgatggatgctaactggtatgaaaactt	Protospacer
*.... . ***************.*** ***

14. spacer 2.11|853183|32|CP029559|CRISPRCasFinder,CRT matches to MK327931 (Escherichia phage vB_EcoM_G17, complete genome) position: , mismatch: 10, identity: 0.688

ggttttggggatgctaactggtacgaatacta	CRISPR spacer
gacccgatggatgctaactggtatgaaaactt	Protospacer
*.... . ***************.*** ***

15. spacer 2.11|853183|32|CP029559|CRISPRCasFinder,CRT matches to LT603033 (Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I) position: , mismatch: 10, identity: 0.688

ggttttggggatgctaactggtacgaatacta	CRISPR spacer
gacccgatggatgctaactggtatgaaaactt	Protospacer
*.... . ***************.*** ***

16. spacer 2.11|853183|32|CP029559|CRISPRCasFinder,CRT matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 10, identity: 0.688

ggttttggggatgctaactggtacgaatacta	CRISPR spacer
gacccgatggatgctaactggtatgaaaactt	Protospacer
*.... . ***************.*** ***

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

487537 : 496421

Streptococcus_phage(71.43%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWN61146.1\|487537_488632_+	3-phosphoserine/phosphohydroxythreonine aminotransferase	M1Q1P2	Streptococcus_phage	1.0e-165	79.1
AWN61147.1\|488671_489220_+	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	5.5e-59	60.7
AWN61148.1\|489551_490730_+	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	4.1e-176	78.2
AWN61149.1\|490806_491037_+	hypothetical protein	NA	NA	NA	NA
AWN61150.1\|491033_491567_+	cysteine methyltransferase	M1PFU9	Streptococcus_phage	8.3e-44	52.1
AWN61151.1\|491541_491898_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	6.1e-35	59.8
AWN61152.1\|492012_492876_+	MutR family transcriptional regulator	NA	NA	NA	NA
AWN61153.1\|493217_493643_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	2.6e-16	36.0
AWN61154.1\|494813_496421_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.0e-12	25.2

DBSCAN-SWA_2

636709 : 698858

Tupanvirus(28.57%)

protease,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWN61276.1\|636709_636811_+\|holin	putative holin-like toxin	NA	NA	NA	NA
AWN61277.1\|637171_638701_-	signal protein	NA	NA	NA	NA
AWN61278.1\|639162_639576_+	hypothetical protein	NA	NA	NA	NA
AWN61279.1\|639562_639835_+	hypothetical protein	NA	NA	NA	NA
AWN61280.1\|639926_641078_+	low temperature requirement protein A	NA	NA	NA	NA
AWN61281.1\|641532_642375_+	DegV family protein	A0A0N9SI50	Staphylococcus_phage	2.7e-12	36.8
AWN61282.1\|642367_643219_+	GDSL family lipase	NA	NA	NA	NA
AWN61283.1\|643196_643793_+	DUF2140 domain-containing protein	NA	NA	NA	NA
AWN61284.1\|644046_644322_+	HU family DNA-binding protein	A7KV42	Bacillus_phage	1.3e-24	69.7
AWN61285.1\|644386_644572_+	hypothetical protein	NA	NA	NA	NA
AWN61286.1\|644979_645915_-	dihydroorotate oxidase	A0A1V0SH91	Hokovirus	6.7e-65	44.0
AWN61287.1\|646183_646876_+	phosphoglycerate mutase	NA	NA	NA	NA
AWN61288.1\|647523_648543_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	1.1e-36	35.9
AWN61289.1\|648695_650861_+	penicillin-binding protein	NA	NA	NA	NA
AWN61290.1\|650933_651530_+	recombination protein RecR	NA	NA	NA	NA
AWN61291.1\|651571_652132_-	flavodoxin family protein	NA	NA	NA	NA
AWN61292.1\|652128_652725_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AWN61293.1\|652901_653375_+	MarR family transcriptional regulator	NA	NA	NA	NA
AWN61294.1\|653371_654610_+	acyl-CoA thioester hydrolase	NA	NA	NA	NA
AWN62547.1\|654690_656085_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
AWN61295.1\|656459_657506_+	D-alanine--D-alanine ligase	NA	NA	NA	NA
AWN61296.1\|657695_658649_+	bile acid:sodium symporter family protein	NA	NA	NA	NA
AWN61297.1\|658781_659345_-	folate family ECF transporter S component	NA	NA	NA	NA
AWN61298.1\|659878_661243_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
AWN61299.1\|661266_661947_+	TIGR02206 family membrane protein	NA	NA	NA	NA
AWN61300.1\|662159_662462_-	hypothetical protein	NA	NA	NA	NA
AWN61301.1\|663502_665164_+	ribonuclease J	NA	NA	NA	NA
AWN61302.1\|665253_666039_+	esterase family protein	NA	NA	NA	NA
AWN61303.1\|666146_666863_+\|protease	Zn-dependent protease	NA	NA	NA	NA
AWN61304.1\|666871_667240_+	hypothetical protein	NA	NA	NA	NA
AWN61305.1\|667383_669312_+	multidrug ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	8.1e-49	28.2
AWN61306.1\|669734_670703_+	thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	NA	NA	NA	NA
AWN61307.1\|671190_672189_+	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA
AWN61308.1\|672292_673690_+	dihydrolipoamide acetyltransferase	NA	NA	NA	NA
AWN61309.1\|673868_675644_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA
AWN61310.1\|675757_676750_+	lipoate--protein ligase	NA	NA	NA	NA
AWN61311.1\|676976_678842_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
AWN61312.1\|679528_681427_+	glucan-binding protein	NA	NA	NA	NA
AWN61313.1\|681636_682425_-	glutamine amidotransferase	NA	NA	NA	NA
AWN61314.1\|682424_683768_-	Mur ligase family protein	NA	NA	NA	NA
AWN61315.1\|684090_684324_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
AWN61316.1\|684909_685767_+	TIGR00159 family protein	NA	NA	NA	NA
AWN61317.1\|685756_686746_+	hypothetical protein	NA	NA	NA	NA
AWN61318.1\|686798_688151_+	phosphoglucosamine mutase	NA	NA	NA	NA
AWN61319.1\|688243_688972_+	16S rRNA pseudouridine(516) synthase	NA	NA	NA	NA
AWN61320.1\|689023_689149_+	DUF4044 domain-containing protein	NA	NA	NA	NA
AWN61321.1\|689206_690520_+	GTPase ObgE	NA	NA	NA	NA
AWN61322.1\|691051_691240_+	hypothetical protein	NA	NA	NA	NA
AWN61323.1\|691370_692876_-	multidrug ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	4.1e-24	23.2
AWN62548.1\|693302_694697_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
AWN61324.1\|694809_695550_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.4e-35	41.9
AWN61325.1\|695549_697742_-	amino acid ABC transporter permease	NA	NA	NA	NA
AWN61326.1\|698111_698858_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_3

956043 : 1005917

Lactococcus_phage(11.11%)

bacteriocin,protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWN61521.1\|956043_956238_+\|bacteriocin	ComC/BlpC family peptide pheromone/bacteriocin	NA	NA	NA	NA
AWN61522.1\|956294_956486_+	hypothetical protein	NA	NA	NA	NA
AWN61523.1\|956513_956699_+	hypothetical protein	NA	NA	NA	NA
AWN61524.1\|958405_958549_+\|bacteriocin	bacteriocin-type signal sequence	NA	NA	NA	NA
AWN61525.1\|958580_958985_+	hypothetical protein	NA	NA	NA	NA
AWN61526.1\|959034_960069_+	thiol reductase thioredoxin	NA	NA	NA	NA
AWN61527.1\|960352_960778_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	3.8e-15	34.4
AWN61528.1\|961641_962082_+	hypothetical protein	NA	NA	NA	NA
AWN61529.1\|962237_962495_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
AWN61530.1\|962530_962827_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
AWN61531.1\|963385_963850_+	hypothetical protein	NA	NA	NA	NA
AWN61532.1\|964270_965422_+	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AWN61533.1\|965427_966132_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-32	38.9
AWN61534.1\|966144_967386_+	hypothetical protein	NA	NA	NA	NA
AWN61535.1\|967864_969085_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
AWN61536.1\|969068_969914_+	alpha/beta hydrolase	NA	NA	NA	NA
AWN61537.1\|969978_970791_+	short-chain dehydrogenase	NA	NA	NA	NA
AWN61538.1\|971136_971484_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
AWN61539.1\|971582_971894_+	transcriptional regulator	NA	NA	NA	NA
AWN61540.1\|972059_972332_+	30S ribosomal protein S16	NA	NA	NA	NA
AWN61541.1\|972343_972583_+	KH domain-containing protein	NA	NA	NA	NA
AWN61542.1\|973169_973814_+	transcriptional regulator	NA	NA	NA	NA
AWN61543.1\|973810_974344_+	PadR family transcriptional regulator	NA	NA	NA	NA
AWN61544.1\|974375_975353_+	lantibiotic ABC transporter	NA	NA	NA	NA
AWN62553.1\|975927_976122_+	hypothetical protein	NA	NA	NA	NA
AWN61545.1\|976194_976398_-	CsbD family protein	NA	NA	NA	NA
AWN61546.1\|978135_978597_-	hypothetical protein	NA	NA	NA	NA
AWN61547.1\|979143_979665_+	ribosome maturation factor RimM	NA	NA	NA	NA
AWN61548.1\|979654_980395_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AWN61549.1\|980387_981386_+	ferredoxin--NADP(+) reductase	Q9JRK7	Streptococcus_phage	1.4e-31	54.0
AWN61550.1\|982080_982797_+	N-acetyltransferase	NA	NA	NA	NA
AWN61551.1\|983202_983916_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
AWN61552.1\|983912_984824_+	1-phosphofructokinase	NA	NA	NA	NA
AWN61553.1\|984820_986779_+	PTS fructose transporter subunit IIC	NA	NA	NA	NA
AWN61554.1\|986945_987641_+	JAB domain-containing protein	A0A1B2LRS6	Wolbachia_phage	1.1e-14	26.1
AWN61555.1\|987782_988475_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA
AWN61556.1\|988555_989194_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
AWN61557.1\|989472_989820_-	cysteine desulfurase	NA	NA	NA	NA
AWN61558.1\|989829_990951_-	cysteine desulfurase	A0A1X7QGF3	Faustovirus	8.1e-25	27.2
AWN61559.1\|990952_991918_-	ribose-phosphate diphosphokinase	A0A2K9L8D8	Tupanvirus	1.6e-37	35.1
AWN61560.1\|992184_992382_+	hypothetical protein	NA	NA	NA	NA
AWN61561.1\|992873_993446_-	CYTH domain-containing protein	NA	NA	NA	NA
AWN61562.1\|993575_994241_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA
AWN61563.1\|994215_995058_+	NAD kinase	NA	NA	NA	NA
AWN61564.1\|995054_995945_+	RluA family pseudouridine synthase	NA	NA	NA	NA
AWN61565.1\|995961_996945_+	phosphate acetyltransferase	NA	NA	NA	NA
AWN61566.1\|997079_997835_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AWN61567.1\|997854_998037_+	hypothetical protein	NA	NA	NA	NA
AWN61568.1\|998133_998520_-	sodium transporter	NA	NA	NA	NA
AWN61569.1\|998666_999512_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
AWN61570.1\|999707_1000598_+	lactate dehydrogenase	NA	NA	NA	NA
AWN61571.1\|1000750_1001662_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
AWN61572.1\|1001667_1002834_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
AWN61573.1\|1003033_1003873_+	thymidylate synthase	U5J9N5	Bacillus_phage	2.1e-81	52.5
AWN61574.1\|1003956_1004478_+	dihydrofolate reductase	A0A1B2IFI7	Erwinia_phage	9.3e-16	30.7
AWN61575.1\|1004492_1004663_+	hypothetical protein	NA	NA	NA	NA
AWN61576.1\|1004684_1005917_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.4e-134	59.4

DBSCAN-SWA_4

1256648 : 1264044

Streptococcus_phage(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWN61793.1\|1256648_1257326_-	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	2.8e-89	68.9
AWN61794.1\|1257333_1258494_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	6.9e-152	69.1
AWN61795.1\|1258611_1260765_+	alkaline phosphatase	W6LM83	Streptococcus_phage	1.6e-263	68.5
AWN61796.1\|1261029_1261647_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AWN61797.1\|1261815_1262130_-	phosphoribosyl-ATP diphosphatase	NA	NA	NA	NA
AWN61798.1\|1262246_1262567_-	phosphoribosyl-AMP cyclohydrolase	A0A2H4UVM0	Bodo_saltans_virus	2.6e-08	30.8
AWN61799.1\|1262563_1263322_-	imidazole glycerol phosphate synthase subunit HisF	A0A2H4UVM0	Bodo_saltans_virus	2.8e-05	24.7
AWN61800.1\|1263324_1264044_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	A0A2H4UVM0	Bodo_saltans_virus	2.8e-10	24.8

DBSCAN-SWA_5

1433609 : 1497103

Streptococcus_phage(38.46%)

bacteriocin,protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWN62570.1\|1433609_1435004_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
AWN61937.1\|1435214_1435670_-	ribonucleotide reductase assembly protein NrdI	NA	NA	NA	NA
AWN61938.1\|1435971_1436631_-	saccharopine dehydrogenase	NA	NA	NA	NA
AWN61939.1\|1436926_1437262_+	MerR family transcriptional regulator	NA	NA	NA	NA
AWN61940.1\|1437314_1437662_-	50S ribosomal protein L19	NA	NA	NA	NA
AWN61941.1\|1437760_1438948_-	voltage-gated chloride channel protein	A0A1X9I5Z9	Streptococcus_phage	6.5e-97	53.0
AWN61942.1\|1439027_1439294_-	chorismate mutase	NA	NA	NA	NA
AWN61943.1\|1439360_1440095_-	TVP38/TMEM64 family protein	NA	NA	NA	NA
AWN62571.1\|1440429_1441815_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
AWN61944.1\|1442123_1442567_-	flavodoxin	NA	NA	NA	NA
AWN61945.1\|1442632_1443640_-	adenosine deaminase	NA	NA	NA	NA
AWN61946.1\|1443860_1444652_+	glutathione-dependent disulfide-bond oxidoreductase	NA	NA	NA	NA
AWN61947.1\|1444747_1445692_+	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA
AWN61948.1\|1445675_1446608_+	thiamine biosynthesis protein ApbE	NA	NA	NA	NA
AWN61949.1\|1446693_1447299_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	3.3e-57	58.6
AWN62572.1\|1447317_1448571_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	2.7e-61	58.5
AWN61950.1\|1448795_1449038_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
AWN61951.1\|1449278_1449581_-	acetate kinase	NA	NA	NA	NA
AWN61952.1\|1449583_1449922_-	cupin domain-containing protein	NA	NA	NA	NA
AWN61953.1\|1449933_1450689_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AWN61954.1\|1451286_1452807_-	zinc ABC transporter substrate-binding protein AdcA	NA	NA	NA	NA
AWN61955.1\|1453406_1454318_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	1.9e-109	67.0
AWN61956.1\|1454314_1455292_-	YvcK family protein	A1IMD5	Streptococcus_phage	6.6e-140	76.0
AWN61957.1\|1455288_1456176_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.1e-05	28.9
AWN61958.1\|1457516_1458125_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AWN61959.1\|1458567_1460349_+	CoA activase	NA	NA	NA	NA
AWN61960.1\|1460362_1462966_+	activator of (R)-2-hydroxyglutaryl-CoA dehydratase	NA	NA	NA	NA
AWN61961.1\|1464449_1464827_-	RidA family protein	NA	NA	NA	NA
AWN61962.1\|1464845_1465940_-	glycerol dehydrogenase	NA	NA	NA	NA
AWN61963.1\|1466199_1467546_-\|tRNA	asparagine--tRNA ligase	L7RCX2	Acanthamoeba_polyphaga_moumouvirus	1.1e-55	32.3
AWN61964.1\|1467821_1468193_-	VOC family protein	NA	NA	NA	NA
AWN61965.1\|1468202_1469387_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
AWN62573.1\|1469383_1469863_-	hypothetical protein	NA	NA	NA	NA
AWN61966.1\|1470017_1472489_-	bifunctional DnaQ family exonuclease/ATP-dependent helicase	A0A1X9I5C8	Streptococcus_phage	2.8e-219	48.4
AWN61967.1\|1472849_1472951_-	acetoin reductase	NA	NA	NA	NA
AWN61968.1\|1473116_1473947_+	alpha/beta hydrolase	NA	NA	NA	NA
AWN61969.1\|1474045_1474318_+	hypothetical protein	NA	NA	NA	NA
AWN61970.1\|1474440_1475376_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.1e-87	54.3
AWN62574.1\|1475588_1476341_-\|transposase	transposase	NA	NA	NA	NA
AWN61971.1\|1476927_1478106_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
AWN61972.1\|1478268_1478922_+	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	1.7e-67	56.2
AWN61973.1\|1480569_1483251_-	cation-translocating P-type ATPase	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	2.0e-69	28.9
AWN61974.1\|1483466_1484636_-	neuraminidase (sialidase)	NA	NA	NA	NA
AWN61975.1\|1484690_1485590_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
AWN61976.1\|1485639_1486878_-	four-carbon acid sugar kinase family protein	NA	NA	NA	NA
AWN61977.1\|1487038_1487287_+	hypothetical protein	NA	NA	NA	NA
AWN61978.1\|1487389_1488820_+	hypothetical protein	NA	NA	NA	NA
AWN61979.1\|1488938_1489328_-	DUF1934 domain-containing protein	NA	NA	NA	NA
AWN61980.1\|1489457_1490750_+	phosphohydrolase	E3T4P8	Cafeteria_roenbergensis_virus	7.7e-27	31.8
AWN61981.1\|1491363_1492173_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
AWN61982.1\|1492172_1493387_+	aminoacyltransferase	NA	NA	NA	NA
AWN61983.1\|1493383_1494616_+	aminoacyltransferase	NA	NA	NA	NA
AWN61984.1\|1494691_1495627_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.4e-86	54.3
AWN61985.1\|1495973_1496138_+\|bacteriocin	ComC/BlpC family peptide pheromone/bacteriocin	NA	NA	NA	NA
AWN61986.1\|1496440_1497103_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_6

2120968 : 2129420

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWN62517.1\|2120968_2121592_-	transglycosylase	Q4Z8Z7	Staphylococcus_phage	5.3e-26	70.0
AWN62518.1\|2121749_2122532_-	peptidoglycan-binding protein LysM	A0A249XZV3	Enterococcus_phage	4.3e-17	65.7
AWN62519.1\|2122985_2123783_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
AWN62520.1\|2123775_2124615_-	energy-coupling factor transporter ATPase	A0A2H4PQG7	Staphylococcus_phage	8.8e-16	30.0
AWN62521.1\|2124590_2125427_-	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	7.4e-23	33.2
AWN62522.1\|2125430_2125973_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
AWN62523.1\|2125984_2126842_-	transcriptional regulator in cluster with unspecified monosaccharide ABC transporter	NA	NA	NA	NA
AWN62524.1\|2126902_2128171_-	peptidase M16	A0A2K9LA15	Tupanvirus	1.4e-17	28.2
AWN62525.1\|2128172_2129420_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	1.2e-90	41.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP029559

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection