CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP028161	Lactococcus lactis subsp. lactis strain 14B4 plasmid p14B4, complete sequence	0 crisprs	NA	0	0	0	0
CP028160	Lactococcus lactis subsp. lactis strain 14B4 chromosome, complete genome	2 crisprs	cas3,DEDDh,csa3,DinG	0	0	9	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP028160_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP028160_1

1475785-1475883

Orphan

Consensus_repeat	Method
CTATGGATAAAATGCTCGCTTTGGTCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP028160_1

>merge|CP028160|1|1475785-1475883|CRISPRCasFinder
CTATGGATAAAATGCTCGCTTTGGTCGCTAACGAACGAGAGAATTATCAGTTCCACTGACAATTCTTTTAACTATCGATAAAATGCTCGCTTTGGTCGC

>CP028160|1|1|1475785-1475883|CRISPRCasFinder
CTATGGATAAAATGCTCGCTTTGGTCGC	TAACGAACGAGAGAATTATCAGTTCCACTGACAATTCTTTTAA
CTATCGATAAAATGCTCGCTTTGGTCGC

Protein	Signature genes	Signature genes Name	Protein_function
CP028160.1\|AWN65983.1\|1483266_1483824_-\|rRNA-large-subunit-pseudouridine-synthase-E	unknown	unknown	gnl\|CDD\|211334
CP028160.1\|AWN65967.1\|1466383_1467532_-\|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl\|CDD\|224733
CP028160.1\|AWN65973.1\|1472329_1472860_+\|heptaprenyl-diphosphate-synthase	unknown	unknown	gnl\|CDD\|227110
CP028160.1\|AWN65981.1\|1481315_1482455_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|369254
CP028160.1\|AWN65972.1\|1471925_1472333_+\|transporter	unknown	unknown	gnl\|CDD\|227646
CP028160.1\|AWN65969.1\|1469027_1469654_-\|5-bromo-4-chloroindolyl-phosphate-hydrolase	unknown	unknown	gnl\|CDD\|227252
CP028160.1\|AWN65971.1\|1470913_1471855_+\|UTP--glucose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|224131
CP028160.1\|AWN65975.1\|1473806_1474523_+\|ribosomal-RNA-small-subunit-methyltransferase-G	unknown	unknown	gnl\|CDD\|223434
CP028160.1\|AWN65982.1\|1482451_1483237_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224429
CP028160.1\|AWN65984.1\|1484141_1485305_-\|cell-surface-protein	unknown	unknown	gnl\|CDD\|371730
CP028160.1\|AWN65977.1\|1475938_1476874_-\|dihydroorotate-dehydrogenase	unknown	unknown	gnl\|CDD\|235982
CP028160.1\|AWN65978.1\|1476946_1477735_-\|dihydroorotate-dehydrogenase-electron-transfer-subunit	unknown	unknown	gnl\|CDD\|99814
CP028160.1\|AWN65974.1\|1472850_1473810_+\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|223220
CP028160.1\|AWN65986.1\|1486169_1486514_-\|hypothetical-protein	unknown	unknown	unknown
CP028160.1\|AWN65985.1\|1485382_1486195_-\|WxL-domain-containing-protein	unknown	unknown	gnl\|CDD\|372694
CP028160.1\|AWN65976.1\|1475004_1475718_-\|orotidine-5'-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|234695
CP028160.1\|AWN65970.1\|1469845_1470871_+\|glycerol-3-phosphate-dehydrogenase-(NAD(P)(+))	unknown	unknown	gnl\|CDD\|234629
CP028160.1\|AWN65968.1\|1467704_1468883_-\|toxic-anion-resistance-protein	unknown	unknown	gnl\|CDD\|377557
CP028160.1\|AWN65979.1\|1478203_1479568_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341046
CP028160.1\|AWN65980.1\|1479944_1481156_+\|virion-core-protein	unknown	unknown	gnl\|CDD\|226711

Protein	Function_ID	Function_description	E-value
CP028160.1\|AWN65983.1\|1483266_1483824_-\|rRNA-large-subunit-pseudouridine-synthase-E	gnl\|CDD\|211334	cd02566, PseudoU_synth_RluE, Pseudouridine synthase, Escherichia coli RluE. This group is comprised of bacterial proteins similar to E. coli RluE. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. Escherichia coli RluE makes psi2457 in 23S RNA. psi2457 is not universally conserved.	2.69982e-100
CP028160.1\|AWN65967.1\|1466383_1467532_-\|N-acetylglucosamine-6-phosphate-deacetylase	gnl\|CDD\|224733	COG1820, NagA, N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism].	1.28836e-178
CP028160.1\|AWN65973.1\|1472329_1472860_+\|heptaprenyl-diphosphate-synthase	gnl\|CDD\|227110	COG4769, COG4769, Predicted membrane protein [Function unknown].	1.74231e-64
CP028160.1\|AWN65981.1\|1481315_1482455_+\|ATP-binding-protein	gnl\|CDD\|369254	pfam07191, zinc-ribbons_6, zinc-ribbons. This family consists of several short, hypothetical bacterial proteins of around 70 residues in length. Members of this family have 8 highly conserved cysteine residues, which form two zinc ribbon domains.	0.000852226
CP028160.1\|AWN65972.1\|1471925_1472333_+\|transporter	gnl\|CDD\|227646	COG5341, COG5341, Uncharacterized protein conserved in bacteria [Function unknown].	7.84966e-52
CP028160.1\|AWN65969.1\|1469027_1469654_-\|5-bromo-4-chloroindolyl-phosphate-hydrolase	gnl\|CDD\|227252	COG4915, XpaC, 5-bromo-4-chloroindolyl phosphate hydrolysis protein [General function prediction only].	2.19745e-89
CP028160.1\|AWN65971.1\|1470913_1471855_+\|UTP--glucose-1-phosphate-uridylyltransferase	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	5.53483e-173
CP028160.1\|AWN65975.1\|1473806_1474523_+\|ribosomal-RNA-small-subunit-methyltransferase-G	gnl\|CDD\|223434	COG0357, GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane].	2.20408e-85
CP028160.1\|AWN65982.1\|1482451_1483237_+\|hypothetical-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	1.16841e-69
CP028160.1\|AWN65984.1\|1484141_1485305_-\|cell-surface-protein	gnl\|CDD\|371730	pfam11797, DUF3324, Protein of unknown function C-terminal (DUF3324). This family consists of several hypothetical bacterial proteins of unknown function.	4.78809e-46
CP028160.1\|AWN65977.1\|1475938_1476874_-\|dihydroorotate-dehydrogenase	gnl\|CDD\|235982	PRK07259, PRK07259, dihydroorotate dehydrogenase.	0
CP028160.1\|AWN65978.1\|1476946_1477735_-\|dihydroorotate-dehydrogenase-electron-transfer-subunit	gnl\|CDD\|99814	cd06218, DHOD_e_trans, FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as 3 cofactors: FMN, FAD, and an [2Fe-2S] cluster.	1.32372e-108
CP028160.1\|AWN65974.1\|1472850_1473810_+\|polyprenyl-synthetase-family-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	9.30264e-84
CP028160.1\|AWN65985.1\|1485382_1486195_-\|WxL-domain-containing-protein	gnl\|CDD\|372694	pfam13731, WxL, WxL domain surface cell wall-binding. The WxL motif appears in two or three copies in these bacterial proteins and confers a cell surface localization function. It seems likely that this region is the cell wall-binding domain of gram-positive bacteria, and may interact with the peptidoglycan.	1.47704e-28
CP028160.1\|AWN65976.1\|1475004_1475718_-\|orotidine-5'-phosphate-decarboxylase	gnl\|CDD\|234695	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase.	4.01899e-133
CP028160.1\|AWN65970.1\|1469845_1470871_+\|glycerol-3-phosphate-dehydrogenase-(NAD(P)(+))	gnl\|CDD\|234629	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase.	1.94654e-180
CP028160.1\|AWN65968.1\|1467704_1468883_-\|toxic-anion-resistance-protein	gnl\|CDD\|377557	pfam05816, TelA, Toxic anion resistance protein (TelA). This family consists of several prokaryotic TelA like proteins. TelA and KlA are associated with tellurite resistance and plasmid fertility inhibition.	2.06226e-124
CP028160.1\|AWN65979.1\|1478203_1479568_-\|MFS-transporter	gnl\|CDD\|341046	cd17503, MFS_LmrB_MDR_like, Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.48693e-66
CP028160.1\|AWN65980.1\|1479944_1481156_+\|virion-core-protein	gnl\|CDD\|226711	COG4260, COG4260, Membrane protease subunit, stomatin/prohibitin family [Amino acid transport and metabolism].	1.09739e-168

>CP028160.1|AWN65976.1|1475004_1475718_-|orotidine-5'-phosphate-decarboxylase
MQENRPVIALDFPEFSDVKDFLEKFDPSEQLYIKLGMELFYTAGPQVVYYVKSLGHSVFLDLKLHDIPNTVESSMRVLARLGVDMVNVHAAGGVEMMVAAKRGLVAGTPVGRQRPKLIAVTQLTSTSEKIMQNDQKIMTSLEESVINYAQKTAQAGLDGVVCSAHEVEKIKAATSKEFICLTPGIRPEGASKGDQKRVMTPKEARTIGSDYIVVGRPITQAKDPVASYHAIKAEWNQ
>CP028160.1|AWN65975.1|1473806_1474523_+|ribosomal-RNA-small-subunit-methyltransferase-G
MTPDEFLSALTEFDIQLSDKQIKQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPILYGLITDQPVSILDIGAGAGFPSLPMKIIFPELKVTIIDSLNKRINFLSLLTEELGLENVTLLHGRAEDFGQDANYRGTFDFVTARAVARLSVLTEFTIPFLKKNGILLSLKAAQFEEELNDAKKAIATLGGKFIKEVAYELPNGDERHIALIEKKKETPKKYPRKAGTPAKNPIK
>CP028160.1|AWN65974.1|1472850_1473810_+|polyprenyl-synthetase-family-protein
MDLKNNFWKDYPELEKELVQVQQLMKSHVTIKNSDVKSAIFDIFDAGGKMLRPAYLLLFSGFTDLSESERLALAASVEMMHTATLVHDDVIDHADTRRGVATLSAKYGPEIAVYAGDYLFIAVFRLMSEHSLELSNLTKNIGSIERLLGGELGQLNHHFNLQQTLDDYIENISGKTGELFALSASVAPLISKNNTLTKRAYKIGMNIGISFQIMDDYLDYASTAQTLGKPVLEDIKQGIYSAPVLFALQENNALVSELIKNEKFDEVYDFIKTSDALEKTKALAKSYTLSALNLIDKLPKGKNRELIAEITRKLLERTL
>CP028160.1|AWN65973.1|1472329_1472860_+|heptaprenyl-diphosphate-synthase
MNIKEYVYVSLLTAAAVVMGIIESSLPPFFAFAPGAKVGLANLVMIIAVFTLRWRQVWVMQILRLLITALFTGFSVFLYSFAGGILSLLAMYLMKQFGPKLVSMIGISTVGGFFHNFGQLAMASLLAKTTSVMLYLPWLAFFGILAGFAIGIAGNQLITRVKPIQELFIKESKQWT
>CP028160.1|AWN65972.1|1471925_1472333_+|transporter
MNFFKNTVNFFKSIKTKPLDFVIIFLLFIASFSTLFFFATGSKGAQAELRISGKVIKTFDLNKNQTWTYRDKDGDYNKIQVKNGEIAVVEANCKDQIDVQRGYISKTGETIVCLPHNLVIEVMSGQKDEQVDYKV
>CP028160.1|AWN65971.1|1470913_1471855_+|UTP--glucose-1-phosphate-uridylyltransferase
MKQNTIPTKARKVRKAVIPAAGLGTRFLPATKAIAKEMLPIVDKPTIQFIVEEALKSGIEDILIVTGKAKRPIEDHFDSNIELEQNLLEKGKTELLKLVEETTDINLHFIRQSHPKGLGHAVLQAKAFVGNEPFVVMLGDDLMNITGNETPLTKDLINDYEKTHASTIAVMKVPHDDVDKYGVIDPNGEVSKGLYNVERFVEKPNVDEAPSDLAIIGRYLLTPEIFDVLETQVPGAGNEIQLTDAIERLNKTQRVFAHEFTGKRYDVGDKLGFVETTIEYGLEHPQIGANLKNYIIEKAKELSKDDSKNITKK
>CP028160.1|AWN65970.1|1469845_1470871_+|glycerol-3-phosphate-dehydrogenase-(NAD(P)(+))
MNPQKIAVLGPGSWGTALSQVLNDNGHEVRIWGNNPEQMAEINEKHTNTRYFKDVVLDEKIKAFDRLDLALEDVDAILFVVPTKVTRLVAKQVAEVLKHKVHILHASKGLEQGTHERISTILEEEIPAQLRGEIVVVSGPSHAEETIVRDITLISAASKDHDEAKYAQAIFSNDYFRLYTNTDVIGVETAGALKNIIAVGAGALHGLGFGDNAKAAIITRGLAEITRLGVAMGAEPLTYSGLSGVGDLIVTGTSIHSRNWRAGDALGRGEKLADIEKNMGMVIEGVSTTKAAFELAQQLGIDMPITETIYKVLYENLDAKTGILDIMRRETRAENEFINNK
>CP028160.1|AWN65969.1|1469027_1469654_-|5-bromo-4-chloroindolyl-phosphate-hydrolase
MPVSLFMNHQDMMFGYGHLGIVNVIFGLVLFFLIIKMIIGISFMRKNPDEREEGYKDKGMSKKENIERYHEAGLSDTDIKIFRENLSEAKENIKTWEKLLKKEDDLQVVESVTGGLEASKQTFKYIVQNPQELTKQNEFLYKDLPNMVKLSEKFIEMKKQSVRTEEINRDLDETLLLIKTLSHSISKNYHEILMDDVNVIKHQVDFDK
>CP028160.1|AWN65968.1|1467704_1468883_-|toxic-anion-resistance-protein
MDNPILDDLMTNDKVIKEAEQLDEQQKSEIVKMHEKASLAAVEVLSTEELEKAKELSKQLDESSAQSVINYGASAQDKISAFSQSVLNKVQAQDLGEVGSSLTDLMFNLQQANPNELVAENKGIFTKMFGKVKRSIFEVTQKYQKIGAGIDKISAKLNNEQQGLLQDNEMLDKLYDENLNYFKALNVYIAGAELKVQELDTEIIPQARKEAQDSTDNALIVQKVNDLESYKNRLEKRAHDLRLARQLTIQQAPQIRLIQNTNQELAEKIQTSINTAIPLWKNQVAIALTLLKQKDALTSQRIVSETTNDLLRKNSEMLKASTIEAATENERGLVDIETLKLTQQNLVDTIQETMRIQAEGRQKRQQGEVELSKMEEEIKEKLLQLSNNKQLN
>CP028160.1|AWN65967.1|1466383_1467532_-|N-acetylglucosamine-6-phosphate-deacetylase
MTYYIKADQFFYAYETKKGGFLEITDGKFGEWTEEAPAGADILDYSGQSIAPGLVETHIHGFGGADAQDAEVEGIMGTMSEGLLSAGVTSFLPSPLTDDHEGLKAVCTVVGEHYQEARGAKVRGIFFEGPFFTEEKKGAQNPKYMRDAKMWELEDWQEAAHGMLKKIGLAPERDGSEDFIRKATESGVVIALGHSNATYKQAVAGVQAGASVWVHTFNGMSGMTHQEPGMVGAILNTPNTYAELICDGHHVRPEAAEIVMKMKGADHVVLITDSMRAAGLPDGPYMLGEYEVEVRDGAAWLPTGRPAASILTLKTAVKNVIDWGIATPAEAIMMASLTPAKSVNIDDVCGQIKPGLSADFIVLDNDFDLVATYLDGEKRYEA
>CP028160.1|AWN65977.1|1475938_1476874_-|dihydroorotate-dehydrogenase
MTENNRLSVKLPGLDLKNPIIPASGCFGFGEEYAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGLQNPGLEVIMAEKLPWLNENFPDLPIIANVAGSEEDDYVAVCAKIGDAPNVKAIELNISCPNVKHGGQAFGTDPDVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEHACADGLTMINTLMGVRFDLKTRKPVLANITGGLSGPAIKPVALKLIHQVAQVVDIPIIGMGGVESAQDVLEMYMAGASAVAVGTANFADPFACPKIIEKLPEVMDQYGIDSLENLIQEVKNSKK
>CP028160.1|AWN65978.1|1476946_1477735_-|dihydroorotate-dehydrogenase-electron-transfer-subunit
MPKLQEMMTIVSQREVASNIFEMVLKGELVEEMDLPGQFLHLAVPNASMLLRRPISISSWDKVAKTCTILYRIGDETSGTYEISKLQTGAKIDVMGPLGNGFPVDEVVSTDKILIVGGGIGVPPLYELAKQLEEKNCQMTILLGFASEKVKILEKEFAELKNVSLKIATDDGSYGTKGHVGMLMEEVDFEVDALYTCGAPAMLKAVAKKYDQLERLYISMESRMACGIGACYACVEHDKEDENHALKVCEDGPVFLGKQLSL
>CP028160.1|AWN65979.1|1478203_1479568_-|MFS-transporter
MNKNNHFHLLGAVIATGILSFSGVLIETAMNVTFPTLINEFGLSTSKIQWVTTIYLLVIAITIPLSSYFNERFSARKLFLVANLIFLVGVLTNCFSPNFAMLLFGRLLQGVGTGIGLPLMFHLILTKAPLHKRGMMMGIGTLTTSIAPAIGPTYGGIISNSLDWRYIYIFLLPLVVISLVLGLACLPREGAKTPKKLALRPVIALSIMFFAFISALSAEHLMTFALLFIVGLVGAFLFVQFNRKESLIDLGILKNHRFVALIFSLLVYQALLLGLSFVLPSFIQVSAGFSSSVAGLFMFPGALIGAVLAPISGKVLDQIGARKPITTGLILAALGLALLFVFLPTKSLALLLVAHIVLMLGLGISYSNLMTCSLSTLATDQLSDGNALVNTLQQFIGAVATAVVATTLSIFQGLNGFKVGTSHGTSIILALFFILIIVSLIVSFPNLKKIRANH
>CP028160.1|AWN65980.1|1479944_1481156_+|virion-core-protein
MGIIKAATGSLGGALADQWLEVIEPNEMSDQTVFTKGIKVRKDAKRGSNRKGTEDVITDGSIVHVYENMMMILVDGGKIIDYTAEPGYYTVKNDTAPSLFNGDLRDSIQESFFRFKFGGTTPQKQEVYYVNLQEIKGIKFGTATPLQYFDNFYNAELFLRTHGTYSIKITDPLAFYANVIPKNADHVEIQEINDQYLAEFLTALNTSINQYSAQGERVSFLTSKSMELSKYMASVLDEDWKQLRGMEIVSVAVASISYTDDSQKLINMRNQGAMLGDPSIREGFVQGAVARGLEAAGSNTGGAPNAFMGMNMGGQNLAGFSQTNQSQMQAQAENKADTWTCPECNTKNTGKFCSNCGQAKPSATPVMPELNMACNECGAVVNLANGVPKFCPECGKPFVAKAL
>CP028160.1|AWN65981.1|1481315_1482455_+|ATP-binding-protein
MSESQVLTHKCPNCGGPLLFEPKNQKFHCEYCGSTFTEQEVSDFEAKQEAAKVTDSPISSVSNAETTDEKEKITDSDQKRADENTDEEIGLFLCPSCGAEIVTDATTASTWCYYCHNPVVLTERLSGKFLPEKILPFQIERKAAEEQFLDWVGKKKFVPKAFFDKKQIQNLSGVYFPYWAVDAELSGGISAQATNLRVWIVGDTEYTEHSQYEIQRGGETKFKDLIKNALKKNLSDKMVGAVQPFDMTAAIPFKNQYLSGFLTEKRDIEFPDMKENVEREFRQYADGLMESTIVGYTSVSNLQSNQQIKNIDEDYVLLPIWLVTYKEAGNDRLFYYAMNGQTGKVAGLLPIDKKKLWTVAIGIFILVLLLGIIVGYLLS
>CP028160.1|AWN65982.1|1482451_1483237_+|hypothetical-protein
MRKKLVILSLFFLSFFFLLLAPKTSAATFSSGLEDNLQLFGGNVTLLEQEAQKLANETKAGVYVVTTDSSTPASQMAKTYLADKVGAKNNGVVLVINMNLRKVYIWATGNLKYYLPSSRIEKTLDIVQPELTDNNYYQAVSGFFDQVSKYYQAGIPTSRKYSINSETGAVTFHRSFQPLSILIALIISLIAAGGFVWTIYRRYQMKDAHAVWRYDYGRNGNLELHQREDILVNTFITTRIIPRPSSDNNNFSDGSGGGRSF
>CP028160.1|AWN65983.1|1483266_1483824_-|rRNA-large-subunit-pseudouridine-synthase-E
MNFCKKIMIILFNKPYDVLTKFTDGEGRKTLKDYIKIPNVYAAGRLDKDSEGLLLLTDDGKLNHLLTDPKSKSYKTYLVQVEGEFSSEAAQKLQKGLLLKDGKTLPAKVKLIDEPDWLWERTPPIRERKAIPTSWVEISIKEGKNRQIRRMTAAVGFPTLRLIRWSIGQYSLGNLKSGEYKIIQK
>CP028160.1|AWN65984.1|1484141_1485305_-|cell-surface-protein
MKKLQLFLSAIFLTLSFGLAQTGYARTDDYTVKPIIPENQSNKDLGYFDILLGADKEQTLQVELSNNTEQEIKIDVTLSSAVTNMTGLVVYEPTEIVADSSLKYNLKDYVNTPKVVTLPPLTRQKLDLKVKMPNEAFDGQIAGGITFSKEGQNDKEEDSEGITVKNTYSYTIALLMRQNDNEVSPDLKLKTVSPSQINGRNVINVNLQNPTMTYINTMNVKATISGISNTDIKYTYSNSMMQMAPNTSFDLPIPTSNQSAATRVSEPLKPGKYRLQLVVNARTDDQGKYEAQVDNKTARYKYQWTFDQEFTISDNQAQKLNDSDPTVKKEKDWTWLLFVIGILLLVLFFIILLWKRRKKSQKEEEEKQALREKIEVQEKIIDDLNKK
>CP028160.1|AWN65985.1|1485382_1486195_-|WxL-domain-containing-protein
MKKTILSLSGVAVITATLLSTSVLEVSATSVGSTTSGANVAFQPKKTPTNPVSPGDGKTPISPTTPGVPNTSNPVASDDGLTLDYVPAINFGTHYVDASTAHTWSAWAANDGSGKAIPQFMQVTDNRGTATGPTGWSVSLTQTAQFKGMKAGDLVNAVMTFNNDKTNTVVSTSMNKASSTVNTATNALVPGTAVNIFQADAGTGTGTNLLSFGAGDGSTLVTDPETLDSATNTTGKVDPNITLNVPAGSAKVDTYTTTLNWNLYSAPGNA
>CP028160.1|AWN65986.1|1486169_1486514_-|hypothetical-protein
MKIKYILWVICALLLLNTSVILAQEIGGTNTTGKVGFLEKEPIEKPPVTSSSQATGQSQILTNQNLPIVGTNQNDSLLPFVVGLVTIGVGSLMIKKTKRIRIKENFYEKNNTQP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP028160_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP028160_2

1936915-1937009

Orphan

Consensus_repeat	Method
TTTATTACTGACAGACTTGTCAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP028160_2

>merge|CP028160|2|1936915-1937009|CRISPRCasFinder
TTTATTACTGACAGACTTGTCAGCTTTGCTGACAAATCCTTCATCCATTGATAAAAAGCTCAATTCAATCGCTTTTTACTGACAGACTTGTCAGC

>CP028160|2|2|1936915-1937009|CRISPRCasFinder
TTTATTACTGACAGACTTGTCAGC	TTTGCTGACAAATCCTTCATCCATTGATAAAAAGCTCAATTCAATCG
CTTTTTACTGACAGACTTGTCAGC

Protein	Signature genes	Signature genes Name	Protein_function
CP028160.1\|AWN66377.1\|1927967_1928417_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226892
CP028160.1\|AWN66382.1\|1934856_1935147_-\|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl\|CDD\|227179
CP028160.1\|AWN67068.1\|1937701_1938184_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223659
CP028160.1\|AWN66390.1\|1943905_1944640_-\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
CP028160.1\|AWN66386.1\|1939402_1940659_-\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
CP028160.1\|AWN66384.1\|1937127_1937586_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	unknown	unknown	gnl\|CDD\|273918
CP028160.1\|AWN66380.1\|1934016_1934280_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378057
CP028160.1\|AWN66381.1\|1934279_1934750_-\|type-VII-secretion-protein-EssA	unknown	unknown	unknown
CP028160.1\|AWN66379.1\|1932902_1934030_-\|type-VII-secretion-protein-EssB	unknown	unknown	gnl\|CDD\|188441
CP028160.1\|AWN66391.1\|1944639_1945326_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
CP028160.1\|AWN66383.1\|1935481_1936894_-\|Fe-S-cluster-assembly-protein-SufB	unknown	unknown	gnl\|CDD\|131035
CP028160.1\|AWN66375.1\|1927317_1927674_-\|hypothetical-protein	unknown	unknown	unknown
CP028160.1\|AWN66374.1\|1926043_1927327_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368093
CP028160.1\|AWN66392.1\|1945473_1946382_-\|diacylglycerol-kinase-family-lipid-kinase	unknown	unknown	gnl\|CDD\|224513
CP028160.1\|AWN66388.1\|1941740_1943072_-\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	unknown	unknown	gnl\|CDD\|133463
CP028160.1\|AWN66387.1\|1940795_1941566_-\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473
CP028160.1\|AWN66389.1\|1943074_1943776_-\|adaptor-protein-MecA	unknown	unknown	gnl\|CDD\|227199
CP028160.1\|AWN66378.1\|1928422_1932901_-\|type-VII-secretion-protein-EssC	unknown	unknown	gnl\|CDD\|274860
CP028160.1\|AWN66376.1\|1927677_1927956_-\|hypothetical-protein	unknown	unknown	unknown
CP028160.1\|AWN66385.1\|1938185_1939403_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|131034

Protein	Function_ID	Function_description	E-value
CP028160.1\|AWN66377.1\|1927967_1928417_-\|hypothetical-protein	gnl\|CDD\|226892	COG4495, COG4495, Uncharacterized protein conserved in bacteria [Function unknown].	0.000330962
CP028160.1\|AWN66382.1\|1934856_1935147_-\|WXG100-family-type-VII-secretion-target	gnl\|CDD\|227179	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown].	1.95573e-21
CP028160.1\|AWN66387.1\|1940795_1941566_-\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	2.57723e-148
CP028160.1\|AWN66390.1\|1943905_1944640_-\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.02808e-157
CP028160.1\|AWN66386.1\|1939402_1940659_-\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	1.98344e-131
CP028160.1\|AWN66384.1\|1937127_1937586_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	gnl\|CDD\|273918	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family. Three iron-sulfur cluster assembly systems are known so far. ISC is broadly distributed while NIF tends to be associated with nitrogenase in nitrogen-fixing bacteria. The most recently described is SUF, believed to be important to maintain the function during aerobic stress of enzymes with labile Fe-S clusters. It is fairly widely distributed. This family represents one of two different proteins proposed to act as a scaffold on which the Fe-S cluster is built and from which it is transferred. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	9.34852e-67
CP028160.1\|AWN66380.1\|1934016_1934280_-\|hypothetical-protein	gnl\|CDD\|378057	pfam08817, YukD, WXG100 protein secretion system (Wss), protein YukD. The YukD protein family members participate in the formation of a translocon required for the secretion of WXG100 proteins (pfam06013) in monoderm bacteria, with the WXG100 protein secretion system (Wss). Like the cytoplasmic protein EsaC in Staphylococcus aureus, YukD was hypothesized to play a role of a chaperone. YukD adopts a ubiquitin-like fold. Usually, ubiquitin covalently binds to protein and flags them for protein degradation, however conjugation assays have indicated that the classical YukD lacks the capacity for covalent bond formation with other proteins. In contrast to the situation in firmicutes, YukD-like proteins in actinobacteria are often fused to a transporter involved in the ESAT-6/ESX/Wss secretion pathway. Members of the YukD family are also associated in gene neighborhoods with other enzymatic members of the ubiquitin signaling and degradation pathway such as the E1, E2 and E3 trienzyme complex that catalyze ubiquitin transfer to substrates, and the JAB family metallopeptidases that are involved in its release. This suggests that a subset of the YukD family in bacteria are conjugated and released from proteins as in the eukaryotic ubiquitin-mediated signaling and degradation pathway.	3.58752e-07
CP028160.1\|AWN67068.1\|1937701_1938184_-\|hypothetical-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	3.28577e-22
CP028160.1\|AWN66379.1\|1932902_1934030_-\|type-VII-secretion-protein-EssB	gnl\|CDD\|188441	TIGR03926, T7_EssB, type VII secretion protein EssB. Members of this family are associated with type VII secretion of WXG100 family targets in the Firmicutes, but not in the Actinobacteria. This protein is designated YukC in Bacillus subtilis and EssB is Staphylococcus aureus. [Protein fate, Protein and peptide secretion and trafficking].	9.52354e-80
CP028160.1\|AWN66391.1\|1944639_1945326_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	5.78444e-76
CP028160.1\|AWN66383.1\|1935481_1936894_-\|Fe-S-cluster-assembly-protein-SufB	gnl\|CDD\|131035	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB. This protein, SufB, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
CP028160.1\|AWN66378.1\|1928422_1932901_-\|type-VII-secretion-protein-EssC	gnl\|CDD\|274860	TIGR03928, T7_EssCb_Firm, type VII secretion protein EssC, C-terminal domain. This model describes the C-terminal domain, or longer subunit, of the Firmicutes type VII secretion protein EssC. This protein (homologous to EccC in Actinobacteria) and the WXG100 target proteins are the only homologous parts of type VII secretion between Firmicutes and Actinobacteria. [Protein fate, Protein and peptide secretion and trafficking].	0
CP028160.1\|AWN66374.1\|1926043_1927327_-\|hypothetical-protein	gnl\|CDD\|368093	pfam04740, LXG, LXG domain of WXG superfamily. This domain is present is the N-terminal region of a group of polymorphic toxin proteins in bacteria. It is predicted to use Type VII secretion pathway to mediate export of bacterial toxins.	5.13733e-09
CP028160.1\|AWN66392.1\|1945473_1946382_-\|diacylglycerol-kinase-family-lipid-kinase	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	3.04246e-70
CP028160.1\|AWN66388.1\|1941740_1943072_-\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	gnl\|CDD\|133463	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.	2.04808e-85
CP028160.1\|AWN66389.1\|1943074_1943776_-\|adaptor-protein-MecA	gnl\|CDD\|227199	COG4862, MecA, Negative regulator of genetic competence, sporulation and motility [Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms / Cell motility and secretion].	1.91709e-85
CP028160.1\|AWN66385.1\|1938185_1939403_-\|cysteine-desulfurase	gnl\|CDD\|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0

>CP028160.1|AWN66383.1|1935481_1936894_-|Fe-S-cluster-assembly-protein-SufB
MTENSTQEVVKDLEEYKFGFHDNAELEFTTGLGLTEEVIREISETKNEPEWMLEFRLKSFEAFKKLDMPKWGPDLSGIDFNDIVYYQKPSAKAARSWEDVPQEIKDTFEKIGIPEAERSYLAGASAQYESEVVYHNMKDEFEKLGIIFTDTDSGLRDYPEIFKKYFSKLVPPTDNKLAALNSAVWSGGSFVYVPKGVKCEIPIQAYFRINNEKSGQFERTLIIVEEGASIQYVEGCTAPTYSASSLHAAVVEIFVEEGGYMRYSTIQNWSDNVYNLVTKRAAAEKNATVEWIDGNLGSKVSMKYPAVHLNGPGARGTMLSIAFAGANQNQDTGAKMIHNAPNTSSSIISKSIAKNGGAVNYRGQVTFGKNSKKSASHIECDTILMDDLSKSDTVPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLTEKEATDMIVMGFIEPFTKELPMEYAVELNRLISYSMEGSIG
>CP028160.1|AWN66382.1|1934856_1935147_-|WXG100-family-type-VII-secretion-target
MGAISVTPAELKQQAQVYIQSKEQIEQAIQRVNSMNSTIAEEWKGQAFQAYLEQYNQLEQNVRKFEELLESINQQLNKYADTVEERDAQDAQSFGF
>CP028160.1|AWN66381.1|1934279_1934750_-|type-VII-secretion-protein-EssA
MKKQKVFFIFSGLLFLFYSPFAVSADSDGSLQLNSDMITTQSGAGSSTSDFAIRSQLFSKDLDKKAQEKVKSGEEATKHIDEIDFNKESQNKLYKANYQSLKTELFKNYSQTNVASNDSKETSKNNGMLILLIMALPLMILTGVVARSLTRRKRRK
>CP028160.1|AWN66380.1|1934016_1934280_-|hypothetical-protein
MKDHIEISLEWLGKQVDLAVPSNVTSTRLIELLAQAFKVNGQNLPEHWNFIVKGKSVALGSGLTLKELGLGNGDILQLIVGEKDEII
>CP028160.1|AWN66379.1|1932902_1934030_-|type-VII-secretion-protein-EssB
MKLFDGQNTLTAERKDEQFIVYLTGTQVNQQELEFIKSKTNLVSSEDEEYAFKISYPLSNKEKSLKSLMLEMKSELERLELVLKLKTLSTKNSGYKVPFVHPENIFFIDGDLAFIHIGIRDGIAPMNIDDTLALSQYKALTLAILNPKISYDNFVNGEMSLRDKFSQALSNCDSFEEVLHLVETKLTKERQKEEAALVKVSKGRYRFFKYAGSVAVVAAIAMGVLTIIDQKTTIPKQKAIMTAQADFITSHYDKTLDDLKSYQPKQLSKDARFVLASSSINLANLSQTQKAAVLNNISSTTDDNTLNYWIYQGRGEFEKALNLAKNIGDDQLTLLAYTDLYQATKLNTSMNGDEKQKKLEEYNKQIQELSKSLGK
>CP028160.1|AWN66378.1|1928422_1932901_-|type-VII-secretion-protein-EssC
MKELFELENSQNENQNFLYEVRHPEEILYVIFILKDQLERVTLTESQMTSAYENLMFGIVNDHVLVNGGRVSTGKNEIDGITFLVLAAQDLHTHFLVLDNQELVINNKNEHRAIQTLDDSLVIIDNEDENHPKALIKPLGDFAYYNNERLTQSGSREIKVGDTILTPDLMVERRSEQWKVTAFSQEIIFNPEFFLEQHRKLEKPQDFPEYRRSPRLNLEIPEEKFKYEKIEDKEQAPKGGLLKAVLPPVGMLAAGSITTLMSGRNPLMMMATALASLMTVTFTVTQYRTEKKDRLERESHREEDYQAYLAKTTSKIGQAHRQENEIIHYQQPSPQELLEMIEKYDSRLYERMVNNKDFLQVSLGTGTQPSGLKVETDYTSRDEDEWATHVKALVEKYSQQEDVPVALDLRNQTLGLIGNYDVLKNMISNLYLQMAFFQSYRDLNFITLVPEKSYAKDWQQWRFLPHFKVQGINTRGIVHNAKSRDIILSSFYQIINSRKQELNAAGREKPTFLPHFVFTIFDDSYLAGHGLNEFLAEDMSDLGVTVIWAKEDKKLLPETITALVEVKNQQAGVLIQDNGLHLDKVYKPYPQLESKENFEVVLRQMSSLEHMEVEKNAIPERLSLLEQYLVETVEDLNISERWAQAEPSKSIASMIGWKGKKEFAFWDLHEQVHGPHAIVGGTSGSGKSEFLTTFLMGLAINFSPEDIGMLIIDWKGGGIADTLADLPHFMGSITNLDGAGTARALASINAELKKRQREFREYGVSNIAGYTKLYRERNNPREGVNYPHKPLPHLMLVSDEFAELKENVPEFLDELTSVARIGRSLGVHLILATQKPDGVVNDQIDANAKSKVALKMSDEANSKALIKTGDAAHITNAGRGYLRVGESEVYELFQSGYGGVDYNPHATTEEIKDERIYRVNESGQWELLYDPREDLIDQGAVKEDLPTQLEATIDEIVKNFEHSSYTKPDKPWLPNLGEAIITTKPKAKKKRNLSIPLGLLDIPSMQEQKEYFYDLEKSSHTVIFASPGFGKSVTLQTTVMNLARQNTPEQVQFNLFDFGTNGLLPLKNLPHVADIVTLEENEKLQKMLHRLEQNLAERKALFKKEGVANLNQYQAKAKRELPILVNVLDSYDGLSQNDNRKDNIDNLLMKVLREGAAVGIYLVITAGRYNAIRMNMMANIQTKMALFLNEDGDLSNLFGRDKLEQVELPGRAQIKLDQPLALQIYLPVKGESEVEVLAALEQEITAMNNSWTGSLPDEIPMVPDELTPEAYAANINKEKDLMPLGLNKLSAQAEFFKLFNAKSLGIFPASAKQFKQVMPFLMEQLFESIENAEVILIDASKNMEQYASKASVYISKASIIEQNMNLQKAIQAWLSEESDTPRVLIMNGLADLVTQLNIQQAQLISLLTQNNPNKQLIVMDYFTRVGNSFNMPTTVVRENAYQILFGGDLNAQHFIETLSPETKKETFNKNVLHMVKDEEFFNVVIPMESEEV
>CP028160.1|AWN66377.1|1927967_1928417_-|hypothetical-protein
MAQKDEKLQFLGLGSMVEIDHMDALADTLYTIVARAVGKDGDGKTILRYQVAPHPQGGSAKQADDIITLAESSITKVVHEGYHDEKDEVFLSKMITGMENAIKNMSSNPKKEKTVTLKKEPEKIEVPLPPKVEDEKELLKKDPFYKFRS
>CP028160.1|AWN66376.1|1927677_1927956_-|hypothetical-protein
MAGKISSDLGSANAAVSQFKTGNSSSQHFSLGESNITGMKSAEKISNSIIGDLSKLESGIKKQADKFPKLAEIIEERDKQDAADLTTMNWGF
>CP028160.1|AWN66375.1|1927317_1927674_-|hypothetical-protein
MTRDKNADKRLEFNRKIASKEQESDELHLEERKTQNRIENFEAVMMKSFRNLQAIEEELNRRSHIQAAYDETAQKQKYMSNVISQQKEGLKQVYQQRSLKLEDEREQLQKERDSLSWD
>CP028160.1|AWN66374.1|1926043_1927327_-|hypothetical-protein
MGLIYNPTDSQGLVSALNANIRTADEMIESLNRASKHLIDALGNKTLSGAAFTAGKGMFSQLVIPTISKASQALDKLKSEAKQYEGFASNAGEELLDEDKLNEQLQNLQTQQAALSSQISFYNQLAASHSDDNALNTSYSDFSRQLSSFMGTTASDIQKIQDKLKKLHEFNTSVSPLFTTSDQDFKAILQGISLITSVTFTKDGKFSIDKIKDGYELLKGGLQYRDGKLFLGGEKIVETVNSNGEKVLKFGNKFLSKLENGHIYKNGKAFENLTKIDLANYKQFGKTFKSEFKTSINITEDFKAWKGATKFSKLGKALGGLGTVLTITDNATEDFKGGVNGESVKNFVVDTTVDVGSGAASTAAGAALGSLILPPLGTVVGAGLGVAFNFGLNYKYGNPPKSTVDHIKSGIKDGINKVGKLFSHKFW
>CP028160.1|AWN66384.1|1937127_1937586_-|SUF-system-NifU-family-Fe-S-cluster-assembly-protein
MALSKLDNLYRAVILDHSSNPRHAGELQTGCMVDLNNPTCGDVIRLTVEFENDVISNIAFSGHGCTISTASASMMTVAVLGKTKEEAKELATIFSAMVTGETDERQEKLGDAQFLAGVSKFPARVKCSTLAWNALKKAIDVGEAQETVIHGE
>CP028160.1|AWN67068.1|1937701_1938184_-|hypothetical-protein
MLNWVASLPLWLATTFLFVVVFFRAQCTFWLGKLSYHGILKTKWGKKLEKNSETSAGILAIQKMGWPIIPLSFLTVGFQTAVQFGAGLTNWSWYKYTLAAIPGYLAWGFIYASGGLSLFRSLVQGSIGLLILFIIIILAVVIAANLVLRYIRKNGIKTDD
>CP028160.1|AWN66385.1|1938185_1939403_-|cysteine-desulfurase
MLEGIKKDFPVLNQIVNDEPLVYLDNAATTQKPLKVLAAIKDYYENDNANVHRGVHTLAERATEKYEAAREKVRQFINAKSTKEVLFTRGTTTSINWVAQFAGQILKTGDEIVISIMEHHSNIVPWQEVAKKTGVILKFVYLKDGQLDMDDLRKKITNQTKFVSIAHVSNVLGTINPVEEITKIAHEHGAYMVVDGAQSTPHMAIDLQKMDVDFFAFSGHKMMGPTGIGVLYGKEELLNQFEPVEFGGEMIDFVYESHSTWTELPWKFEAGTPNIAGAIALGAAIDYIQELGIDQIHQHEIELIDYLMPKLQEIEGLKIYGPKDNVKRGGLIAFNIEGLHPHDVATALDMEGVAVRAGHHCAQPLLNYLETPATARASFYLYNTKADCDKLVEALKKTKEFFNLD
>CP028160.1|AWN66386.1|1939402_1940659_-|Fe-S-cluster-assembly-protein-SufD
MNQEILNFSQMHAEPAWLSDLRQKAALEFENLELPNIERVKINRWGLDHLTISENEEIGSVPTFTEIPNHPLLVQVGSQTVMEQMTPNLAEQGVIFTDFNSALTEIPELLEENFGSVVPFNESRLTAANTATFNSGLVLYVPDGVEVLEPIESILMQEGSSEVPFNKRILIIVGKNAKVDYLERLETSGEQSSKVKANIVVEVIAKAGAQVKFAAIDRLGENVTASVVRRGLIGDNATVDWSVGVMNDGNVVADFDSDLKGNGSHSQIKVVGISTGHQTQGIDTRVTNFGLNSVGHILQNGVILDKGTLTFNAIGHIIKGAKNADAQQSSHVLMLSDKGRGDANPILLIDENEVTAGHAASVGQVDEEDLFYLQSRGLDEETAKRLVIRGFLGSVVSEIPVKSVQAEFIETIERKLGM
>CP028160.1|AWN66387.1|1940795_1941566_-|Fe-S-cluster-assembly-ATPase-SufC
MATLEIKNLHVAIEDKEILKGVNLVINTNEIHAIMGPNGTGKSTLSAAIMGNPNYSVTQGEVLFDGQNVLEMSVDERARLGLFLAMQYPSEIPGITNAEFLRAAMNAKRAEDDKVSVMEFIKKLDKNMEVLSMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPTFAILDEIDSGLDIDALKVVAKGVNSMRGEKFGALIITHYQRLLDYITPDVVHIMMDGRVVKTGGAELAKRLETEGYVNIAEELGLEYKEEV
>CP028160.1|AWN66388.1|1941740_1943072_-|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase
MVDTLKEIPFALKFLIVIIITFGISVILTPIMTFVSKAIGAVDKPNERRVNKKPMPSAGGLVIFIAFAIATLFILPHIVHNQPPIHSQPPVHGASHQPIQLVSYFSYIWPFIVGAGIVVLTGLIDDIKEISPKMKLLGLTVAASFIWFFTNARFDNLKIPFGGPLLIFPAWLSFIFTVFWILAITNAINLIDGLDGLASGVSIISLTTMGIVSYFFLPSPNVFLPITIFIMVAAIMGFFPYNYHPAIIYLGDTGALFLGFIISVASLQGLKNATAVAVLTPLLILGVPITDTIMAMVRRKLNRQSIATADKRHLHHRLMALGFTHRGAVLVIYGIASIFAFISILLQFSSRIGGILLVIACLFGLEIFIELVGILGENRQPVLKALKFVGNSSYRDKVLHSDEDADIDENEEDIENHSMIDEEIDEPTQEFPIQNYRRSRNKK
>CP028160.1|AWN66389.1|1943074_1943776_-|adaptor-protein-MecA
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAMLGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGTKKDEAEQEPDFIYYSIRYEDIMSVLTGIKNVKFADEESEFYRYDGNFYLVVLDNQKEKGKMHVESTRSRMMEYGEVTKMSREFLQEYGECLIATRALDVLRKI
>CP028160.1|AWN66390.1|1943905_1944640_-|amino-acid-ABC-transporter-ATP-binding-protein
MNEYLIEIKNLHKYFGKNEVLKGLDIQIKKGEVVVMIGPSGSGKSTFLRTMNLLEKPTDGQVYFEGVNIADKSVDVFKHREKMGMVFQQFNLFPNMTVLENLCLAPVKTGKMTKEEAKKTAEDLLQRVGLSDKAEAYPQALSGGQQQRVAIARALAMNPDVMLFDEPTSALDPEMVGEVLAVMQELAKEGMTMVVVTHEMGFAKTVADRVLFMADGTIVEQGKPAQVFDSPKEKRTQDFLAKVL
>CP028160.1|AWN66391.1|1944639_1945326_-|amino-acid-ABC-transporter-permease
MNFDFLPKYLPYFNDGMIVTILISAFVVLIGTLLGIVTALAKISKIAPLRWLANIYIEIFRGTPMLVQIMLGFGLMGSLSLPTFQVGILQQDLGRLIPGIIVISLNSGAYMAEIVRAGIEAVPLGQKEAAYSLGIRPKQAMATVILPQALRNILPAVGNEFVTIIKDSSLLYTIGVMEVFNGAQTVANLTYQTISPMLFVALYYFVVTFVVSRLLVLFEKKLGKGYAK
>CP028160.1|AWN66392.1|1945473_1946382_-|diacylglycerol-kinase-family-lipid-kinase
MTYYLLANPNSGAGKGARTLETLIPYLEKNNYEYRLFKTKAAGEEGALVRQILDLKNPDDHLVIIGGDGTISLVINELPEEEAFSYIPSGSGNDFARSLKLELDPIESFEAARRGINHEIFIMNYQSKGLSGYALNNIGIGLDATIVKSANEGKLKQVLNKLKLGSFSYILTALHVLITKKPFPALIEVENQEISLENAFLMTFTKHPYFGGGVKISPEATNENADIHLVEYNKHHLLRTFSLIPSVLRGMHLKHPLFLHRVSPQFSVELAESQPVQIDGEIHELVAADRLSISTERRMIIY

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

398503 : 410633

Streptococcus_phage(40.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWN65024.1\|398503_398821_+	thioredoxin	A0A0K2FIM3	Achromobacter_phage	4.5e-05	30.4
AWN65025.1\|398906_399533_+	DUF4479 domain-containing protein	NA	NA	NA	NA
AWN65026.1\|399695_401036_+	NADH oxidase	NA	NA	NA	NA
AWN65027.1\|401125_401515_+	single-stranded DNA-binding protein	A0A0K0MWE1	Streptococcus_phage	1.4e-24	45.0
AWN65028.1\|401634_401919_+	co-chaperone GroES	A0A221S386	uncultured_virus	3.1e-13	44.1
AWN65029.1\|402006_403635_+	chaperonin GroEL	A0A219YK78	uncultured_virus	4.9e-156	56.5
AWN65030.1\|403681_404494_-	MBL fold metallo-hydrolase	A0A0C5AJ83	Bacteriophage	3.1e-34	38.1
AWN65031.1\|404662_406105_-	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	1.4e-32	33.0
AWN65032.1\|406097_406799_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	1.2e-42	39.7
AWN65033.1\|406976_407612_+	thymidylate kinase	M1PSC7	Streptococcus_phage	5.4e-74	65.0
AWN65034.1\|407744_408605_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	5.0e-67	45.2
AWN65035.1\|408656_409439_+	Signal peptidase	NA	NA	NA	NA
AWN65036.1\|409431_409758_+	DNA replication initiation control protein YabA	NA	NA	NA	NA
AWN65037.1\|409757_410633_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	1.3e-99	65.7

DBSCAN-SWA_2

953601 : 990458

Lactococcus_phage(70.73%)

tail,holin,integrase,terminase,capsid,head

attL 952328:952344|attR 995068:995084

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
952328:952344	attL	NA	NA	NA	NA
AWN65493.1\|953601_954735_-\|integrase	site-specific integrase	A0A059NT56	Lactococcus_phage	9.6e-191	91.8
AWN65494.1\|954860_955352_-	hypothetical protein	A0A1B1IMF9	Lactococcus_phage	3.1e-45	92.8
AWN65495.1\|955414_956002_-	hypothetical protein	Q9AZF6	Lactococcus_phage	4.8e-93	85.5
AWN65496.1\|956014_956383_-	XRE family transcriptional regulator	Q9AZF5	Lactococcus_phage	1.5e-57	87.7
AWN65497.1\|956676_956868_+	hypothetical protein	Q9AZF4	Lactococcus_phage	4.3e-27	96.8
AWN67031.1\|956881_957118_+	DNA-binding protein	A0A059NT59	Lactococcus_phage	5.3e-35	94.9
AWN65498.1\|957130_957301_+	hypothetical protein	Q9T1Y5	Lactococcus_phage	6.7e-24	100.0
AWN65499.1\|957567_958368_-	hypothetical protein	NA	NA	NA	NA
AWN65500.1\|958428_958938_+	hypothetical protein	Q38337	Lactococcus_phage	1.9e-85	97.6
AWN65501.1\|958937_959657_+	DNA-binding protein	A0A1P8BMP5	Lactococcus_phage	5.1e-129	97.5
AWN65502.1\|959643_960990_+	ATP-dependent helicase	A0A1B1IMF3	Lactococcus_phage	4.9e-250	97.8
AWN65503.1\|961007_961460_+	hypothetical protein	Q9G0E5	Lactococcus_phage	3.6e-80	97.3
AWN65504.1\|961462_962269_+	hypothetical protein	A0A1B1IMF5	Lactococcus_phage	3.6e-152	98.9
AWN65505.1\|962243_963707_+	DNA primase	A0A1P8BMT9	Lactococcus_phage	1.1e-266	94.4
AWN65506.1\|963930_964242_+	VRR-NUC domain-containing protein	A0A1P8BMN2	Lactococcus_phage	3.7e-52	98.1
AWN65507.1\|964348_964522_+	DUF1497 domain-containing protein	A0A1P8BL92	Lactococcus_phage	3.3e-18	84.2
AWN65508.1\|964518_964725_+	hypothetical protein	A0A1P8BL00	Lactococcus_phage	2.0e-30	98.5
AWN65509.1\|964860_965496_+	hypothetical protein	A0A1W6JNE9	Lactococcus_phage	1.1e-63	57.3
AWN65510.1\|965512_965935_+	aminotransferase	A0A1P8BMQ4	Lactococcus_phage	1.8e-46	68.6
AWN65511.1\|966100_966307_+	hypothetical protein	NA	NA	NA	NA
AWN65512.1\|966303_966654_+	hypothetical protein	A0A059NT79	Lactococcus_phage	8.2e-08	53.0
AWN65513.1\|966646_967054_+	hypothetical protein	A0A1W6JJV2	Lactococcus_phage	4.3e-08	47.7
AWN65514.1\|967080_967665_-	hypothetical protein	NA	NA	NA	NA
AWN65515.1\|967906_968122_+	hypothetical protein	E0YIV7	Lactococcus_phage	2.2e-27	78.6
AWN65516.1\|968122_968353_+	hypothetical protein	Q94M84	Lactococcus_phage	6.7e-35	93.4
AWN65517.1\|968522_968699_+	hypothetical protein	Q94M83	Lactococcus_phage	9.1e-08	51.7
AWN65518.1\|968841_968979_-	hypothetical protein	NA	NA	NA	NA
AWN65519.1\|969363_969663_+	hypothetical protein	NA	NA	NA	NA
AWN65520.1\|969708_970011_+	alpha/beta hydrolase	A0A1S5SFB3	Streptococcus_phage	1.4e-24	61.6
AWN65521.1\|970153_970465_+\|terminase	terminase	Q4ZD78	Staphylococcus_phage	1.2e-10	42.0
AWN65522.1\|970454_972194_+\|terminase	terminase	A3F641	Streptococcus_phage	5.4e-201	59.8
AWN65523.1\|972386_973580_+	hypothetical protein	A0A2P0ZLC9	Lactobacillus_phage	2.0e-37	30.2
AWN65524.1\|973545_974346_+	peptidase	A3F644	Streptococcus_phage	1.4e-42	37.6
AWN65525.1\|974345_975473_+\|capsid	phage major capsid protein	A3F645	Streptococcus_phage	1.0e-80	47.3
AWN65526.1\|975533_975800_+	hypothetical protein	A0A1X9IGH3	Lactococcus_phage	6.9e-07	45.7
AWN65527.1\|975816_976149_+	hypothetical protein	A3F647	Streptococcus_phage	6.8e-12	42.7
AWN65528.1\|976114_976501_+\|head,tail	phage head-tail adapter protein	A0A1S5SFE6	Streptococcus_phage	8.1e-17	40.9
AWN65529.1\|976493_976898_+	hypothetical protein	A0A2P0ZLD7	Lactobacillus_phage	3.3e-13	38.9
AWN65530.1\|976894_977284_+	hypothetical protein	NA	NA	NA	NA
AWN65531.1\|977298_977877_+\|tail	phage tail protein	A3F651	Streptococcus_phage	1.6e-29	43.5
AWN65532.1\|977933_978239_+	hypothetical protein	NA	NA	NA	NA
AWN67032.1\|978235_978442_+	hypothetical protein	NA	NA	NA	NA
AWN65533.1\|978514_979030_+	hypothetical protein	NA	NA	NA	NA
AWN65534.1\|979146_983238_+\|tail	phage tail tape measure protein	A0A1S5SFC1	Streptococcus_phage	1.6e-123	38.6
AWN65535.1\|983234_984806_+\|tail	phage tail protein	Q8LTK1	Lactococcus_phage	6.7e-243	79.5
AWN67033.1\|984805_987454_+	hypothetical protein	Q8LTK0	Lactococcus_phage	0.0e+00	46.7
AWN65536.1\|987708_988038_+	hypothetical protein	Q9AZL1	Lactococcus_phage	4.0e-49	91.6
AWN65537.1\|988021_988297_+	Holin	A0A182BQ79	Lactococcus_phage	1.6e-14	56.9
AWN65538.1\|988296_989076_+\|holin	phage holin	Q38323	Lactococcus_phage	1.2e-120	95.8
AWN65539.1\|989152_989761_+	hypothetical protein	NA	NA	NA	NA
AWN65540.1\|990260_990458_+	hypothetical protein	A0A2I6QQV7	Streptococcus_phage	2.1e-08	60.4
995068:995084	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1031551 : 1055005

Staphylococcus_phage(21.43%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWN65576.1\|1031551_1032244_+	cell division ATP-binding protein FtsE	G9BWD6	Planktothrix_phage	2.7e-31	34.4
AWN65577.1\|1032236_1033172_+	ABC transporter permease	NA	NA	NA	NA
AWN65578.1\|1033274_1034252_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	1.9e-118	66.0
AWN65579.1\|1034601_1036770_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	8.6e-257	61.0
AWN65580.1\|1036905_1037328_-	protein NrdI	A0A142F1R4	Bacillus_phage	2.3e-12	37.3
AWN65581.1\|1037329_1037548_-	NrdH-redoxin	C3U2K9	Lactococcus_phage	7.6e-12	47.6
AWN65582.1\|1037721_1038363_-	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AWN65583.1\|1038637_1040572_+	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	1.1e-125	43.5
AWN65584.1\|1040776_1041316_+	cysteine hydrolase	NA	NA	NA	NA
AWN65585.1\|1041308_1042142_+	3'-5' exonuclease	A0A0K2SUJ2	Clostridium_phage	3.1e-21	39.4
AWN65586.1\|1042138_1042588_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AWN65587.1\|1042862_1045337_+	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	2.1e-97	32.2
AWN65588.1\|1045362_1046268_-	magnesium transporter CorA family protein	NA	NA	NA	NA
AWN65589.1\|1046736_1047825_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	3.8e-51	39.1
AWN65590.1\|1047824_1048475_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	3.2e-42	44.1
AWN65591.1\|1048483_1049680_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	3.6e-111	51.5
AWN65592.1\|1049707_1050172_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.8e-39	53.7
AWN65593.1\|1050274_1050727_+	signal peptidase II	NA	NA	NA	NA
AWN65594.1\|1050787_1051693_+	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	7.0e-11	27.8
AWN65595.1\|1051840_1052284_+	hypothetical protein	NA	NA	NA	NA
AWN65596.1\|1052423_1054046_+	hypothetical protein	NA	NA	NA	NA
AWN65597.1\|1054048_1055005_+	glycosyltransferase	I1TED8	Salmonella_phage	4.0e-49	37.5

DBSCAN-SWA_4

1232733 : 1241155

Lactococcus_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWN65760.1\|1232733_1234200_-	recombinase	A0A141E1W5	Streptococcus_phage	6.5e-99	42.8
AWN65761.1\|1234320_1234818_-	hypothetical protein	NA	NA	NA	NA
AWN65762.1\|1235567_1235897_-	hypothetical protein	NA	NA	NA	NA
AWN65763.1\|1236075_1236306_+	transcriptional regulator	Q77NT7	Lactococcus_phage	1.0e-30	86.8
AWN65764.1\|1236319_1236499_+	hypothetical protein	NA	NA	NA	NA
AWN65765.1\|1236482_1236791_+	hypothetical protein	B5SP04	Lactococcus_phage	2.8e-44	94.1
AWN65766.1\|1236871_1237513_+	hypothetical protein	Q8LTN6	Lactococcus_phage	2.0e-28	36.7
AWN67042.1\|1237671_1238625_+	hypothetical protein	E9LUM3	Lactobacillus_phage	2.6e-24	33.7
AWN65767.1\|1238602_1239511_+	hypothetical protein	NA	NA	NA	NA
AWN65768.1\|1239776_1240019_+	hypothetical protein	NA	NA	NA	NA
AWN65769.1\|1240008_1240422_+	replication terminator protein	A0A097BY30	Enterococcus_phage	2.1e-31	54.6
AWN65770.1\|1240432_1241155_+	hypothetical protein	A0A097BY87	Enterococcus_phage	4.2e-51	48.6

DBSCAN-SWA_5

1517104 : 1528604

Lactococcus_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWN66017.1\|1517104_1517494_-	hypothetical protein	A5GYP6	Lactococcus_phage	5.2e-64	91.5
AWN66018.1\|1517610_1517880_+	DUF3892 domain-containing protein	NA	NA	NA	NA
AWN66019.1\|1518194_1518371_-	hypothetical protein	Q94M83	Lactococcus_phage	2.6e-07	48.3
AWN66020.1\|1519014_1519464_+	hypothetical protein	NA	NA	NA	NA
AWN66021.1\|1519646_1520315_+	type 1 glutamine amidotransferase	NA	NA	NA	NA
AWN66022.1\|1520379_1520583_-	hypothetical protein	Q9AZP0	Lactococcus_phage	3.4e-06	96.3
AWN66023.1\|1520677_1520944_-	hypothetical protein	NA	NA	NA	NA
AWN66024.1\|1520937_1521702_-	helix-turn-helix domain-containing protein	Q9MCG3	Lactococcus_phage	5.1e-95	79.3
AWN66025.1\|1521701_1522028_-	endonuclease	A0A1X9IGF1	Lactococcus_phage	1.9e-46	79.4
AWN66026.1\|1522294_1523221_-	hypothetical protein	A0A1P8BKY8	Lactococcus_phage	5.7e-149	93.8
AWN67051.1\|1524174_1524345_-	hypothetical protein	Q9T1Y5	Lactococcus_phage	9.7e-23	96.4
AWN66027.1\|1524346_1524637_-	hypothetical protein	Q9AZW0	Lactococcus_phage	5.3e-45	90.6
AWN66028.1\|1524649_1525396_-	phage antirepressor Ant	Q6SEF4	Lactobacillus_prophage	3.2e-62	54.1
AWN66029.1\|1525407_1525647_-	XRE family transcriptional regulator	Q38329	Lactococcus_phage	6.5e-33	89.9
AWN66030.1\|1525800_1526406_+	hypothetical protein	NA	NA	NA	NA
AWN66031.1\|1526383_1526578_-	hypothetical protein	NA	NA	NA	NA
AWN66032.1\|1526845_1527397_+	XRE family transcriptional regulator	Q38327	Lactococcus_phage	2.3e-57	85.8
AWN66033.1\|1527407_1527995_+	hypothetical protein	Q9AZW4	Lactococcus_phage	3.6e-93	83.5
AWN66034.1\|1528009_1528210_+	hypothetical protein	Q9T1Z0	Lactococcus_phage	7.1e-25	93.5
AWN66035.1\|1528217_1528604_+	hypothetical protein	S5MNN8	Brevibacillus_phage	2.2e-14	68.8

DBSCAN-SWA_6

1631496 : 1641799

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWN66111.1\|1631496_1633053_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	Q58MG4	Prochlorococcus_phage	1.8e-70	45.9
AWN66112.1\|1633229_1633772_-	hypoxanthine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	1.8e-09	29.9
AWN66113.1\|1633908_1634946_-	epimerase	NA	NA	NA	NA
AWN66114.1\|1635076_1635607_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AWN66115.1\|1635657_1637247_-	ABC transporter ATP-binding protein	F2Y1V6	Organic_Lake_phycodnavirus	1.1e-11	34.1
AWN66116.1\|1637413_1637962_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.6e-18	31.7
AWN66117.1\|1637990_1639007_-	phosphoribosylformylglycinamidine cyclo-ligase	M4QRQ6	Synechococcus_phage	8.3e-61	41.8
AWN66118.1\|1639195_1641799_-	ATP-dependent chaperone ClpB	K4FB40	Cronobacter_phage	8.5e-126	33.1

DBSCAN-SWA_7

1846166 : 1856025

Prochlorococcus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWN66295.1\|1846166_1846928_-	phosphate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.5e-17	30.0
AWN66296.1\|1847093_1847903_-	phosphate ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	7.0e-10	26.5
AWN66297.1\|1847936_1848830_-	phosphate ABC transporter permease PtsA	NA	NA	NA	NA
AWN66298.1\|1848829_1849753_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
AWN66299.1\|1849873_1850725_-	phosphate ABC transporter substrate-binding protein	E3SNT9	Prochlorococcus_phage	4.2e-05	27.3
AWN66300.1\|1851071_1851968_-	phosphate ABC transporter substrate-binding protein	E3SM63	Prochlorococcus_phage	7.2e-08	32.4
AWN66301.1\|1852245_1852713_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	2.7e-43	56.6
AWN66302.1\|1852744_1853320_-	esterase	NA	NA	NA	NA
AWN66303.1\|1853406_1856025_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	7.1e-64	33.3

DBSCAN-SWA_8

2048508 : 2055257

Lactococcus_phage(80.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWN66487.1\|2048508_2049045_-	hypothetical protein	A0A023J2W2	Lactococcus_phage	1.2e-10	58.6
AWN66488.1\|2049037_2049310_-	hypothetical protein	NA	NA	NA	NA
AWN66489.1\|2049310_2049829_-	hypothetical protein	G1BQP1	Mycobacterium_virus	9.9e-10	31.9
AWN66490.1\|2049830_2050079_-	hypothetical protein	Q9AZU9	Lactococcus_phage	2.6e-24	75.0
AWN66491.1\|2050140_2050455_-	hypothetical protein	NA	NA	NA	NA
AWN66492.1\|2050447_2050825_-	hypothetical protein	NA	NA	NA	NA
AWN67072.1\|2051154_2051397_-	hypothetical protein	A0A1P8BL80	Lactococcus_phage	2.4e-06	100.0
AWN67073.1\|2051411_2051609_-	hypothetical protein	A0A1P8BKA8	Lactococcus_phage	1.7e-23	92.3
AWN66493.1\|2051824_2052199_-	hypothetical protein	A0A097BYG6	Leuconostoc_phage	6.7e-08	59.2
AWN66494.1\|2052290_2052596_-	hypothetical protein	NA	NA	NA	NA
AWN66495.1\|2052696_2053362_-	hypothetical protein	Q9AZ77	Lactococcus_phage	2.8e-65	78.3
AWN66496.1\|2053662_2054052_-	hypothetical protein	NA	NA	NA	NA
AWN66497.1\|2054048_2054342_-	hypothetical protein	A0A1B1IMV9	Lactococcus_phage	1.4e-05	33.6
AWN66498.1\|2054433_2054775_-	hypothetical protein	Q8LTM4	Lactococcus_phage	5.7e-30	62.7
AWN67074.1\|2054771_2055257_-	hypothetical protein	A0A1P8BMI2	Lactococcus_phage	1.3e-11	35.6

DBSCAN-SWA_9

2504088 : 2568325

Lactococcus_phage(53.49%)

transposase,holin,protease,tail,integrase,terminase,capsid,tRNA

attL 2528233:2528248|attR 2572849:2572864

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWN66923.1\|2504088_2505456_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
AWN66924.1\|2505507_2506254_-	hypothetical protein	NA	NA	NA	NA
AWN66925.1\|2506253_2508254_-	DNA helicase RecG	B2CRJ8	Acidianus_filamentous_virus	8.0e-07	23.6
AWN66926.1\|2508391_2508736_-	alkylphosphonate utilization protein	NA	NA	NA	NA
AWN66927.1\|2508805_2509816_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AWN66928.1\|2510094_2510616_-	DUF536 domain-containing protein	NA	NA	NA	NA
AWN66929.1\|2510744_2513438_+	magnesium-transporting ATPase	M1HLC0	Paramecium_bursaria_Chlorella_virus	4.0e-70	27.2
AWN67095.1\|2513478_2513952_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AWN66930.1\|2514130_2515150_+	oxidoreductase	NA	NA	NA	NA
AWN67096.1\|2515623_2516157_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AWN66931.1\|2516180_2516636_+	transporter	NA	NA	NA	NA
AWN66932.1\|2522653_2523046_-	30S ribosomal protein S9	NA	NA	NA	NA
AWN66933.1\|2523065_2523512_-	50S ribosomal protein L13	NA	NA	NA	NA
AWN66934.1\|2523878_2524952_+	ABC transporter permease	NA	NA	NA	NA
AWN66935.1\|2524960_2525632_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.5e-34	40.0
AWN66936.1\|2525776_2526655_+	ribonuclease HIII	NA	NA	NA	NA
AWN66937.1\|2526666_2527293_+	signal peptidase I	NA	NA	NA	NA
AWN66938.1\|2527341_2528157_-	pur operon repressor	NA	NA	NA	NA
2528233:2528248	attL	NA	NA	NA	NA
AWN66939.1\|2529247_2530246_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.4e-62	42.5
AWN66940.1\|2530426_2530963_+	hypothetical protein	NA	NA	NA	NA
AWN66941.1\|2531061_2531814_-	hypothetical protein	Q0H268	Geobacillus_phage	2.6e-43	40.4
AWN66942.1\|2531817_2532462_-	hypothetical protein	Q0H269	Geobacillus_phage	2.3e-24	36.3
AWN66943.1\|2532734_2533160_-	DUF1761 domain-containing protein	NA	NA	NA	NA
AWN66944.1\|2533243_2534584_-	1,4-beta-N-acetylmuramidase	A0A1P8BMS7	Lactococcus_phage	7.1e-209	81.7
AWN66945.1\|2534580_2534931_-\|holin	holin	A0A1X9IGI3	Lactococcus_phage	2.6e-38	70.1
AWN66946.1\|2534979_2536266_-	hypothetical protein	A0A1P8BKJ2	Lactococcus_phage	1.2e-48	78.5
AWN66947.1\|2536275_2537394_-	hypothetical protein	Q77MU2	Lactococcus_phage	1.6e-81	43.9
AWN66948.1\|2537395_2538247_-	hypothetical protein	Q38129	Lactococcus_phage	2.3e-56	38.6
AWN66949.1\|2538259_2541739_-\|tail	phage tail tape measure protein	A0A068F1L4	Mycobacterium_phage	1.6e-50	34.1
AWN66950.1\|2541738_2542311_-	hypothetical protein	M1IEU4	Streptococcus_phage	5.8e-27	36.1
AWN66951.1\|2542323_2542797_-	hypothetical protein	NA	NA	NA	NA
AWN66952.1\|2542854_2543157_-	hypothetical protein	NA	NA	NA	NA
AWN66953.1\|2543197_2543680_-\|tail	phage tail protein	M1IFB9	Streptococcus_phage	1.6e-22	42.5
AWN66954.1\|2543672_2544086_-\|capsid	capsid protein	A0A286QML6	Streptococcus_phage	4.8e-23	44.0
AWN66955.1\|2544075_2544447_-\|capsid	capsid protein	B3GW08	Streptococcus_phage	9.2e-26	47.8
AWN66956.1\|2544446_2544794_-	hypothetical protein	NA	NA	NA	NA
AWN66957.1\|2544793_2545198_-	hypothetical protein	Q5YA68	Bacillus_phage	7.7e-10	34.9
AWN66958.1\|2545224_2545473_-	hypothetical protein	A0A1P8BMA7	Lactococcus_phage	1.7e-20	88.7
AWN66959.1\|2545490_2546444_-\|capsid	phage major capsid protein	Q9T1B7	Listeria_phage	6.1e-122	74.8
AWN66960.1\|2546454_2547033_-	scaffolding protein	Q9T1B8	Listeria_phage	1.4e-17	34.7
AWN66961.1\|2547221_2547470_-	hypothetical protein	Q8LTR0	Lactococcus_phage	3.0e-41	98.8
AWN66962.1\|2547519_2548725_-\|capsid	capsid protein	K4JXL1	Streptococcus_phage	3.4e-93	46.6
AWN66963.1\|2548721_2550266_-\|capsid	capsid protein	C5IUJ2	Streptococcus_phage	1.5e-122	48.9
AWN66964.1\|2550267_2551533_-\|terminase	PBSX family phage terminase large subunit	V9QIY4	Oenococcus_phage	6.9e-73	39.3
AWN66965.1\|2551465_2551861_-	hypothetical protein	A0A0S2MYF8	Enterococcus_phage	6.4e-09	37.0
AWN66966.1\|2552035_2552494_-	hypothetical protein	A0A1P8BM80	Lactococcus_phage	4.5e-83	98.0
AWN66967.1\|2552503_2553304_-	hypothetical protein	A0A1X9IGF6	Lactococcus_phage	3.0e-74	53.4
AWN66968.1\|2553307_2553859_-	LemA family protein	A0A1X9IGG1	Lactococcus_phage	4.8e-63	73.3
AWN66969.1\|2554325_2554601_-	hypothetical protein	NA	NA	NA	NA
AWN66970.1\|2554597_2554804_-	hypothetical protein	A0A1P8BMS6	Lactococcus_phage	6.7e-10	46.8
AWN66971.1\|2554821_2555010_-	hypothetical protein	NA	NA	NA	NA
AWN66972.1\|2555006_2555432_-	hypothetical protein	A0A1P8BKW0	Lactococcus_phage	3.3e-72	97.8
AWN66973.1\|2555491_2555863_+	hypothetical protein	NA	NA	NA	NA
AWN66974.1\|2556017_2556260_-	hypothetical protein	A5GZ49	Lactococcus_phage	7.5e-37	88.8
AWN66975.1\|2556252_2557176_-	prephenate dehydrogenase	A5GZ47	Lactococcus_phage	3.4e-146	96.3
AWN66976.1\|2557300_2557726_-	single-stranded DNA-binding protein	Q9AZV6	Lactococcus_phage	5.7e-64	85.1
AWN66977.1\|2557718_2558792_-	hypothetical protein	A0A1P8BLG1	Lactococcus_phage	7.5e-129	78.7
AWN66978.1\|2558793_2559531_-	phage recombination protein Bet	A0A1B1IMV3	Lactococcus_phage	2.5e-131	97.6
AWN66979.1\|2559634_2559871_-	hypothetical protein	Q9MC36	Lactococcus_phage	1.0e-38	98.7
AWN66980.1\|2559870_2560068_-	XRE family transcriptional regulator	NA	NA	NA	NA
AWN66981.1\|2560188_2560470_+	DUF3892 domain-containing protein	NA	NA	NA	NA
AWN66982.1\|2560499_2560691_-	hypothetical protein	A0A1P8BKS3	Lactococcus_phage	4.4e-24	95.2
AWN66983.1\|2560833_2561079_-	hypothetical protein	A0A1P8BMM2	Lactococcus_phage	4.5e-37	92.5
AWN66984.1\|2561091_2561844_-	Rha family transcriptional regulator	R9QMT9	Lactococcus_phage	4.3e-62	53.4
AWN66985.1\|2561862_2562093_-	transcriptional regulator	Q77NT7	Lactococcus_phage	6.7e-35	100.0
AWN66986.1\|2562273_2563035_+	hypothetical protein	NA	NA	NA	NA
AWN66987.1\|2563191_2564004_+	XRE family transcriptional regulator	A0A141E0Q5	Streptococcus_phage	5.4e-63	50.2
AWN66988.1\|2564015_2564339_+	hypothetical protein	NA	NA	NA	NA
AWN66989.1\|2564389_2565535_+\|integrase	site-specific integrase	A0A1P8BMN3	Lactococcus_phage	3.9e-184	85.3
AWN66990.1\|2566195_2568325_-	elongation factor G	A0A2K9L6L3	Tupanvirus	4.9e-47	25.7
2572849:2572864	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP028160

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection