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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP029549 Lactobacillus paracasei strain EG9 plasmid pEG9C, complete sequence 0 crisprs NA 0 0 0 0
CP029548 Lactobacillus paracasei strain EG9 plasmid pEG9B, complete sequence 0 crisprs NA 0 0 0 0
CP029547 Lactobacillus paracasei strain EG9 plasmid pEG9A, complete sequence 0 crisprs NA 0 0 1 0
CP029546 Lactobacillus paracasei strain EG9 chromosome, complete genome 0 crisprs DinG,WYL,DEDDh,csa3,cas3,csn2,cas2,cas9 0 0 15 0

Results visualization

1. CP029547
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 4568 : 54937 54 Lactobacillus_phage(36.36%) bacteriocin,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP029546
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27183 : 85412 59 unidentified_phage(22.22%) protease,transposase NA
DBSCAN-SWA_2 328206 : 408972 75 Faecalibacterium_phage(19.05%) protease,holin,transposase NA
DBSCAN-SWA_3 414832 : 510764 93 Lactobacillus_phage(52.63%) integrase,transposase attL 427121:427180|attR 493984:495369
DBSCAN-SWA_4 630481 : 654158 29 Acinetobacter_phage(33.33%) portal,tail,transposase,head,capsid NA
DBSCAN-SWA_5 774774 : 841795 80 Lactobacillus_phage(90.0%) portal,tail,terminase,integrase,holin,tRNA,transposase,head,capsid attL 774344:774361|attR 849814:849831
DBSCAN-SWA_6 1319147 : 1326587 8 unidentified_phage(33.33%) transposase NA
DBSCAN-SWA_7 1729419 : 1829012 107 Lactobacillus_phage(75.0%) tail,portal,terminase,protease,holin,integrase,tRNA,transposase,head,capsid attL 1763468:1763492|attR 1834602:1834626
DBSCAN-SWA_8 1873524 : 1922988 42 Faecalibacterium_phage(33.33%) tail,transposase NA
DBSCAN-SWA_9 1980508 : 2039999 57 unidentified_phage(21.43%) protease,transposase NA
DBSCAN-SWA_10 2195009 : 2282009 102 Lactobacillus_phage(54.55%) tail,portal,terminase,protease,holin,integrase,tRNA,transposase,head,capsid attL 2214172:2214186|attR 2273539:2273553
DBSCAN-SWA_11 2307854 : 2368552 56 Streptococcus_phage(25.0%) portal,protease,bacteriocin,tRNA,transposase NA
DBSCAN-SWA_12 2371686 : 2417048 46 Indivirus(33.33%) bacteriocin,protease,transposase NA
DBSCAN-SWA_13 2514435 : 2621345 96 Streptococcus_phage(29.03%) tRNA,integrase,transposase attL 2570501:2570515|attR 2624278:2624292
DBSCAN-SWA_14 2656149 : 2720296 56 Acinetobacter_phage(16.67%) protease,tRNA,holin,transposase NA
DBSCAN-SWA_15 2858804 : 2873412 19 Lactobacillus_phage(25.0%) portal,terminase,integrase,transposase,capsid attL 2861148:2861167|attR 2875257:2875276
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage