CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP029575	Escherichia coli strain DA33133 plasmid pDA33133-157, complete sequence	0 crisprs	RT	0	0	2	0
CP029574	Escherichia coli strain DA33133 chromosome, complete genome	0 crisprs	csa3,cas3,DEDDh,RT,DinG,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	0	0	6	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

72 : 52739

Escherichia_phage(30.0%)

integrase,transposase

attL 5280:5339|attR 64355:65176

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO23162.1\|72_777_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWO23163.1\|911_1007_+	23S rRNA methyltransferase attenuator leader peptide ErmL	NA	NA	NA	NA
AWO23164.1\|1132_1870_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	E4ZFQ0	Streptococcus_phage	6.3e-135	99.6
AWO23165.1\|1874_1985_+	hypothetical protein	E4ZFP9	Streptococcus_phage	1.9e-08	88.6
AWO23166.1\|2499_2949_+	hypothetical protein	NA	NA	NA	NA
AWO23167.1\|3477_5010_+\|transposase	IS91 family transposase	NA	NA	NA	NA
5280:5339	attL	NA	NA	NA	NA
AWO23168.1\|5332_6037_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWO23169.1\|8358_8691_+	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
AWO23170.1\|8737_9613_-	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
AWO23171.1\|9868_11131_-\|transposase	IS1380 family transposase ISEc9	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
AWO23172.1\|12268_13129_+	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA
AWO23173.1\|13141_13684_+	tunicamycin resistance protein	NA	NA	NA	NA
AWO23174.1\|14165_14357_-	hypothetical protein	NA	NA	NA	NA
AWO23175.1\|14362_14608_+	hypothetical protein	NA	NA	NA	NA
AWO23176.1\|14658_15786_+	DUF3883 domain-containing protein	NA	NA	NA	NA
AWO23177.1\|15822_16527_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWO23178.1\|16648_17554_+	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
AWO23179.1\|17550_18789_+	MFS transporter	NA	NA	NA	NA
AWO23180.1\|18788_19373_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AWO23181.1\|19318_19675_+	hypothetical protein	NA	NA	NA	NA
AWO23323.1\|19865_20630_-\|transposase	IS6 family transposase IS6100	A0A077SL39	Escherichia_phage	4.3e-86	65.7
AWO23182.1\|20658_20841_+	resolvase	NA	NA	NA	NA
AWO23183.1\|20856_21162_-	PadR family transcriptional regulator	NA	NA	NA	NA
AWO23184.1\|21172_22378_-	chromate transporter	NA	NA	NA	NA
AWO23185.1\|22533_22737_-	hypothetical protein	NA	NA	NA	NA
AWO23186.1\|22755_22935_+	hypothetical protein	NA	NA	NA	NA
AWO23187.1\|22864_23704_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AWO23188.1\|23697_24045_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AWO23189.1\|24250_25039_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5	NA	NA	NA	NA
AWO23324.1\|25169_25643_-	trimethoprim-resistant dihydrofolate reductase DfrA17	A0A1B2IAU3	Erwinia_phage	1.3e-16	34.6
AWO23190.1\|26297_27002_-\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AWO23191.1\|27201_27942_+	site-specific recombinase	I3WFA4	Macacine_betaherpesvirus	2.0e-24	57.6
AWO23192.1\|28226_29204_-	repFIB replication protein A	J9Q7H0	Salmonella_phage	4.6e-101	63.9
AWO23193.1\|29612_29909_-	hypothetical protein	NA	NA	NA	NA
AWO23194.1\|32741_33158_-	PIN domain-containing protein	NA	NA	NA	NA
AWO23195.1\|33154_33385_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
AWO23325.1\|33664_33943_-	hypothetical protein	NA	NA	NA	NA
AWO23196.1\|33944_34163_+	antitoxin CcdA	NA	NA	NA	NA
AWO23197.1\|34164_34470_+	toxin CcdB	NA	NA	NA	NA
AWO23198.1\|34470_35277_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.8e-57	100.0
AWO23199.1\|35998_36754_+	replication initiation protein	I3WF20	Macacine_betaherpesvirus	3.8e-143	100.0
AWO23200.1\|37341_38508_+	protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	7.0e-229	100.0
AWO23201.1\|38507_39479_+	protein SopB	I3WF22	Macacine_betaherpesvirus	4.8e-175	100.0
AWO23202.1\|39906_40179_+	hypothetical protein	NA	NA	NA	NA
AWO23326.1\|40216_41119_+	DUF1281 domain-containing protein	NA	NA	NA	NA
AWO23203.1\|41503_42187_+	DNA methylase	A0A2I7RE86	Vibrio_phage	1.1e-29	36.0
AWO23204.1\|42187_42409_+	hypothetical protein	NA	NA	NA	NA
AWO23205.1\|42422_42857_+	DUF1380 domain-containing protein	NA	NA	NA	NA
AWO23206.1\|44085_44511_+	antirestriction protein	NA	NA	NA	NA
AWO23207.1\|44557_44980_+	DUF1380 domain-containing protein	NA	NA	NA	NA
AWO23208.1\|44976_45168_+	hypothetical protein	NA	NA	NA	NA
AWO23209.1\|45439_45688_-	hypothetical protein	NA	NA	NA	NA
AWO23210.1\|45684_45942_-	hypothetical protein	NA	NA	NA	NA
AWO23211.1\|46199_46430_+	hypothetical protein	NA	NA	NA	NA
AWO23212.1\|46481_47843_+	DUF3560 domain-containing protein	NA	NA	NA	NA
AWO23213.1\|48481_48694_+	hypothetical protein	NA	NA	NA	NA
AWO23327.1\|48606_48864_+	hypothetical protein	NA	NA	NA	NA
AWO23214.1\|49103_49310_+	single-stranded DNA-binding protein	NA	NA	NA	NA
AWO23215.1\|49987_51889_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.1e-32	29.1
AWO23216.1\|52034_52739_+\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
64355:65176	attR	NA	NA	NA	NA

DBSCAN-SWA_2

118690 : 146572

Stx2-converting_phage(28.57%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO23285.1\|118690_120262_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.9e-169	58.5
AWO23286.1\|120965_121199_+	hypothetical protein	NA	NA	NA	NA
AWO23287.1\|121144_121387_-	hypothetical protein	NA	NA	NA	NA
AWO23331.1\|121442_121592_+	Hok/Gef family protein	NA	NA	NA	NA
AWO23288.1\|121875_122133_+	transcriptional regulator	NA	NA	NA	NA
AWO23333.1\|122168_122285_-	replication protein RepA	NA	NA	NA	NA
AWO23332.1\|122368_122443_+	RepA leader peptide Tap	NA	NA	NA	NA
AWO23289.1\|124202_125423_+	arginine deiminase	NA	NA	NA	NA
AWO23290.1\|125433_126345_+	carbamate kinase	NA	NA	NA	NA
AWO23291.1\|126429_127434_+	ornithine carbamoyltransferase	NA	NA	NA	NA
AWO23292.1\|127481_128885_+	YfcC family protein	NA	NA	NA	NA
AWO23293.1\|128965_129445_+	ArgR family transcriptional regulator	NA	NA	NA	NA
AWO23294.1\|129801_130023_-	hypothetical protein	NA	NA	NA	NA
AWO23295.1\|130053_130404_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
AWO23296.1\|130400_130763_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	9.0e-34	88.5
AWO23297.1\|131601_132180_+	DUF2726 domain-containing protein	NA	NA	NA	NA
AWO23298.1\|132592_132946_-	hypothetical protein	NA	NA	NA	NA
AWO23299.1\|133417_134440_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AWO23300.1\|134626_134878_-	hypothetical protein	NA	NA	NA	NA
AWO23301.1\|134844_135102_+	replication protein RepA	NA	NA	NA	NA
AWO23335.1\|135142_135253_-	replication protein RepA	NA	NA	NA	NA
AWO23334.1\|135336_135411_+	positive regulator of RepFIC repA1 expression	NA	NA	NA	NA
AWO23302.1\|135403_136261_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
AWO23303.1\|136623_137010_+	hypothetical protein	NA	NA	NA	NA
AWO23304.1\|137199_137853_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AWO23305.1\|138072_138537_+	mRNA interferase PemK	NA	NA	NA	NA
AWO23306.1\|138533_138638_+	hypothetical protein	NA	NA	NA	NA
AWO23307.1\|138673_141571_-\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	4.2e-182	37.8
AWO23308.1\|141665_142271_+	DNA resolvase	A0A1S5Y2X8	uncultured_archaeal_virus	9.4e-20	35.3
AWO23309.1\|142872_143577_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWO23336.1\|143720_144275_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
AWO23337.1\|144405_145236_+	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA
AWO23310.1\|145867_146572_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP029574

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1530411 : 1565669

Stx2-converting_phage(45.45%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO20065.1\|1530411_1531449_+\|transposase	IS630 family transposase	NA	NA	NA	NA
AWO20066.1\|1531432_1532101_-	preprotein translocase subunit SecA	NA	NA	NA	NA
AWO20067.1\|1532858_1533155_+	XRE family transcriptional regulator	NA	NA	NA	NA
AWO20068.1\|1533444_1533624_+	hypothetical protein	NA	NA	NA	NA
AWO20069.1\|1533784_1534861_+	Fic family protein	NA	NA	NA	NA
AWO20070.1\|1534911_1535541_-	hypothetical protein	NA	NA	NA	NA
AWO20071.1\|1536273_1536495_-	hypothetical protein	NA	NA	NA	NA
AWO20072.1\|1537984_1539016_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	1.8e-18	27.0
AWO20073.1\|1539286_1539730_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
AWO20074.1\|1539745_1540033_+	PTS system transporter subunit IIB	NA	NA	NA	NA
AWO20075.1\|1540045_1541302_+	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
AWO23030.1\|1541548_1541740_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	8.3e-15	65.6
AWO20076.1\|1542224_1543238_-	DUF4432 domain-containing protein	NA	NA	NA	NA
AWO20077.1\|1543249_1544566_-	L-fucose:H+ symporter permease	NA	NA	NA	NA
AWO20078.1\|1544593_1545514_-	ribokinase	NA	NA	NA	NA
AWO20079.1\|1545819_1546602_+	DeoR family transcriptional regulator	NA	NA	NA	NA
AWO20080.1\|1546603_1546702_-	acetolactate synthase	NA	NA	NA	NA
AWO23031.1\|1546829_1547030_-	hypothetical protein	NA	NA	NA	NA
AWO20081.1\|1547217_1547415_+	hypothetical protein	NA	NA	NA	NA
AWO23032.1\|1547418_1547505_+	chemotaxis protein	NA	NA	NA	NA
AWO20082.1\|1547518_1548541_+\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	1.0e-199	99.1
AWO20083.1\|1548537_1549320_+\|transposase	transposase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AWO23033.1\|1549388_1549670_+	hypothetical protein	NA	NA	NA	NA
AWO20084.1\|1549760_1549889_+	alcohol dehydrogenase	NA	NA	NA	NA
AWO20085.1\|1549907_1550012_+	alcohol dehydrogenase	NA	NA	NA	NA
AWO20086.1\|1550069_1550726_-	TetR family transcriptional regulator	NA	NA	NA	NA
AWO20087.1\|1550971_1552249_-	DUF2254 domain-containing protein	NA	NA	NA	NA
AWO20088.1\|1552208_1552367_-\|holin	choline transporter	NA	NA	NA	NA
AWO20089.1\|1552311_1554315_-\|holin	high-affinity choline transporter BetT	A0A2I7QNT1	Vibrio_phage	4.4e-21	25.9
AWO20090.1\|1555865_1556054_-	hypothetical protein	NA	NA	NA	NA
AWO20091.1\|1556098_1556356_+	biofilm development YmgB/AriR family protein	NA	NA	NA	NA
AWO20092.1\|1556518_1556710_-	hypothetical protein	A0A0N7BTS3	Escherichia_phage	2.4e-06	96.2
AWO20093.1\|1557073_1558447_+	esterase-like activity of phytase family protein	NA	NA	NA	NA
AWO20094.1\|1560130_1560478_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
AWO23034.1\|1560474_1560855_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
AWO20095.1\|1560973_1561210_-	hypothetical protein	NA	NA	NA	NA
AWO20096.1\|1561209_1561731_-	hypothetical protein	NA	NA	NA	NA
AWO20097.1\|1561631_1562039_-	hypothetical protein	NA	NA	NA	NA
AWO20098.1\|1562292_1562898_-	inovirus Gp2 family protein	NA	NA	NA	NA
AWO20099.1\|1563053_1563731_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.3e-21	46.0
AWO20100.1\|1563730_1564078_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
AWO20101.1\|1564097_1565669_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.9e-170	58.7

DBSCAN-SWA_2

1913568 : 1973332

Stx2-converting_phage(30.0%)

tRNA,transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO20412.1\|1913568_1914867_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
AWO23052.1\|1914915_1915170_-	protein rof	NA	NA	NA	NA
AWO20413.1\|1915162_1915363_-	hypothetical protein	NA	NA	NA	NA
AWO20414.1\|1915528_1916074_+	hypothetical protein	NA	NA	NA	NA
AWO20415.1\|1916070_1916493_+\|tRNA	peptidyl-tRNA hydrolase ArfB	NA	NA	NA	NA
AWO20416.1\|1916506_1917217_+	lipoprotein NlpE	NA	NA	NA	NA
AWO20417.1\|1917416_1918241_-	endopeptidase	NA	NA	NA	NA
AWO20418.1\|1918294_1920013_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
AWO20419.1\|1920124_1920832_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
AWO20420.1\|1920828_1921233_-	Rcs stress response system protein RcsF	NA	NA	NA	NA
AWO20421.1\|1921350_1922166_-	methionine ABC transporter substrate-binding protein MetQ	NA	NA	NA	NA
AWO20422.1\|1922205_1922859_-	methionine ABC transporter	NA	NA	NA	NA
AWO20423.1\|1922851_1923883_-	methionine import ATP-binding protein MetN	G9BWD6	Planktothrix_phage	9.4e-36	39.7
AWO20424.1\|1924070_1924646_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
AWO20425.1\|1930405_1931209_+	2,5-diketo-D-gluconic acid reductase B	A0A1V0SDE7	Indivirus	2.4e-39	36.2
AWO20426.1\|1931205_1932120_-	LysR family transcriptional regulator	NA	NA	NA	NA
AWO20427.1\|1932360_1933161_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
AWO20428.1\|1933164_1933788_+	SAM-dependent methyltransferase	NA	NA	NA	NA
AWO20429.1\|1933835_1935194_-	lytic transglycosylase	A0A2H4J9N7	uncultured_Caudovirales_phage	5.8e-09	36.0
AWO20430.1\|1935265_1936021_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AWO20431.1\|1936054_1936777_+	SAM-dependent methyltransferase	NA	NA	NA	NA
AWO20432.1\|1936773_1937241_-	ribonuclease HI	J9Q745	Salmonella_phage	1.0e-50	58.7
AWO23053.1\|1937305_1938037_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	4.5e-40	39.0
AWO20433.1\|1937976_1938156_-	hypothetical protein	NA	NA	NA	NA
AWO20434.1\|1938573_1939359_+	hypothetical protein	NA	NA	NA	NA
AWO20435.1\|1939495_1939975_-	hypothetical protein	NA	NA	NA	NA
AWO20436.1\|1939984_1940899_-	hypothetical protein	NA	NA	NA	NA
AWO20437.1\|1940942_1941425_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AWO20438.1\|1941448_1942801_-	hypothetical protein	NA	NA	NA	NA
AWO20439.1\|1942811_1946276_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
AWO20440.1\|1946354_1947833_-	type VI secretion system protein TssA	NA	NA	NA	NA
AWO20441.1\|1947771_1948515_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
AWO20442.1\|1948511_1951277_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.8e-81	30.8
AWO20443.1\|1951285_1952047_-	hypothetical protein	NA	NA	NA	NA
AWO20444.1\|1952051_1953383_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AWO20445.1\|1953385_1953910_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AWO20446.1\|1953906_1955187_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
AWO20447.1\|1955211_1956294_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AWO20448.1\|1956257_1958108_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AWO20449.1\|1958111_1958525_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AWO20450.1\|1958531_1960007_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AWO20451.1\|1960057_1960282_-	hypothetical protein	NA	NA	NA	NA
AWO20452.1\|1960316_1960817_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AWO20453.1\|1961511_1962030_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AWO20454.1\|1962062_1962200_+	hypothetical protein	NA	NA	NA	NA
AWO20455.1\|1962239_1964381_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.4e-25	25.0
AWO20456.1\|1968134_1968812_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.3e-21	46.0
AWO20457.1\|1968811_1969159_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
AWO20458.1\|1969178_1970750_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.9e-170	58.7
AWO20459.1\|1971373_1971592_+	hypothetical protein	NA	NA	NA	NA
AWO20460.1\|1972195_1973332_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

3019057 : 3085090

Enterobacteria_phage(36.36%)

head,integrase,protease,holin,lysis,terminase,capsid,tail,portal

attL 3018894:3018921|attR 3069249:3069276

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3018894:3018921	attL	NA	NA	NA	NA
AWO21416.1\|3019057_3020188_-\|integrase	integrase	O21940	Phage_21	3.4e-103	51.4
AWO21417.1\|3020165_3020414_-	excisionase	NA	NA	NA	NA
AWO21418.1\|3020478_3022950_-	exonuclease	A0A192Y6E0	Salmonella_phage	2.3e-56	57.1
AWO21419.1\|3023042_3023234_-	DUF1482 domain-containing protein	NA	NA	NA	NA
AWO21420.1\|3023230_3023419_-	cell division inhibition protein DicB	NA	NA	NA	NA
AWO21421.1\|3023987_3024206_-	hypothetical protein	NA	NA	NA	NA
AWO21422.1\|3024235_3024406_-	hypothetical protein	NA	NA	NA	NA
AWO21423.1\|3024365_3024521_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	3.0e-07	53.2
AWO21424.1\|3024713_3025172_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	2.8e-24	46.2
AWO21425.1\|3025198_3025426_+	transcriptional regulator	NA	NA	NA	NA
AWO21426.1\|3025409_3025931_+	hypothetical protein	NA	NA	NA	NA
AWO21427.1\|3025857_3026877_+	hypothetical protein	U5P0A0	Shigella_phage	1.4e-55	60.2
AWO21428.1\|3026917_3027340_+	DUF977 domain-containing protein	A0A0U2QQN3	Escherichia_phage	4.8e-63	91.8
AWO21429.1\|3027592_3028492_+	regulator	NA	NA	NA	NA
AWO21430.1\|3028806_3029460_-	methyltransferase domain-containing protein	NA	NA	NA	NA
AWO21431.1\|3029472_3030168_-	hypothetical protein	NA	NA	NA	NA
AWO21432.1\|3030458_3030695_+	hypothetical protein	NA	NA	NA	NA
AWO21433.1\|3030853_3031066_+	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	1.1e-26	94.3
AWO21434.1\|3031282_3031534_+	hypothetical protein	NA	NA	NA	NA
AWO21435.1\|3031600_3031879_+	hypothetical protein	I6PCV7	Cronobacter_phage	2.5e-12	50.0
AWO21436.1\|3031880_3032927_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.7e-109	54.8
AWO21437.1\|3032939_3033314_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	5.8e-36	63.6
AWO21438.1\|3033310_3034132_+	antitermination protein	K7P7B9	Enterobacteria_phage	7.6e-81	60.8
AWO21439.1\|3034358_3034556_+	TrmB family transcriptional regulator	Q9MC00	Enterobacteria_phage	1.4e-28	98.5
AWO21440.1\|3034706_3035756_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	2.3e-199	96.0
AWO23098.1\|3036056_3036143_+	DUF3927 domain-containing protein	NA	NA	NA	NA
AWO21441.1\|3036631_3036844_-	hypothetical protein	NA	NA	NA	NA
AWO21442.1\|3036914_3037250_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	5.2e-44	74.8
AWO21443.1\|3037510_3039367_+	DUF1737 domain-containing protein	Q08JA2	Stx2-converting_phage	0.0e+00	88.4
AWO21444.1\|3039517_3039733_+\|holin	holin	G9L6J5	Escherichia_phage	9.0e-34	100.0
AWO21445.1\|3039737_3040082_+	DUF1327 domain-containing protein	A0A0P0ZD64	Stx2-converting_phage	6.1e-56	96.5
AWO21446.1\|3040132_3040666_+	lysozyme	Q6H9V6	Enterobacteria_phage	2.8e-100	95.5
AWO21447.1\|3040662_3041121_+\|lysis	lysis protein	K7PJW6	Enterobacteria_phage	1.5e-65	88.2
AWO21448.1\|3041537_3042158_+	hypothetical protein	A0A0U2RXY7	Escherichia_phage	2.3e-53	53.7
AWO21449.1\|3042099_3043167_-	hypothetical protein	NA	NA	NA	NA
AWO21450.1\|3043577_3044126_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.0e-57	84.2
AWO21451.1\|3044097_3046026_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	9.7e-260	66.7
AWO21452.1\|3046009_3046216_+\|tail	phage tail protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
AWO21453.1\|3046212_3047805_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	4.9e-185	61.3
AWO21454.1\|3047794_3049300_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	2.3e-99	53.3
AWO21455.1\|3049336_3049684_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	6.8e-23	58.1
AWO21456.1\|3049741_3050770_+\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	3.6e-112	61.0
AWO21457.1\|3050821_3051205_+	DNA-packaging protein FI	NA	NA	NA	NA
AWO21458.1\|3051197_3051551_+\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	1.5e-41	70.1
AWO21459.1\|3051566_3052100_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.6e-58	66.7
AWO21460.1\|3052096_3052492_+\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
AWO21461.1\|3052499_3053252_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	1.2e-133	98.4
AWO21462.1\|3053265_3053697_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	6.2e-42	68.8
AWO21463.1\|3053723_3054137_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
AWO21464.1\|3054117_3056691_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	84.2
AWO21465.1\|3056687_3057017_+\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	1.6e-58	98.2
AWO21466.1\|3057016_3057715_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	3.6e-132	98.7
AWO21467.1\|3057719_3058463_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.5e-147	96.4
AWO21468.1\|3058360_3059002_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	9.5e-95	85.1
AWO21469.1\|3059133_3059319_-	hypothetical protein	NA	NA	NA	NA
AWO21470.1\|3059479_3062977_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	97.7
AWO21471.1\|3063047_3063647_+	Ail/Lom family protein	A5LH44	Enterobacteria_phage	1.7e-106	95.0
AWO21472.1\|3067576_3067714_+\|capsid	nucleocapsid protein	NA	NA	NA	NA
AWO23099.1\|3067658_3068285_-	methyltransferase	NA	NA	NA	NA
AWO21473.1\|3069426_3069933_-	YciE/YciF family protein	NA	NA	NA	NA
3069249:3069276	attR	NA	NA	NA	NA
AWO21474.1\|3069978_3070479_-	YciE/YciF family protein	NA	NA	NA	NA
AWO21475.1\|3070564_3070744_-	hypothetical protein	NA	NA	NA	NA
AWO21476.1\|3071124_3071931_-	tryptophan synthase subunit alpha	NA	NA	NA	NA
AWO21477.1\|3071930_3073124_-	tryptophan synthase subunit beta	NA	NA	NA	NA
AWO23100.1\|3073135_3074494_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	3.3e-36	40.7
AWO21478.1\|3074497_3076093_-	bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	3.8e-52	38.5
AWO21479.1\|3076092_3077655_-	anthranilate synthase component I	NA	NA	NA	NA
AWO23101.1\|3077746_3077791_-	trp operon leader peptide	NA	NA	NA	NA
AWO21480.1\|3077928_3078810_+	phosphatase	NA	NA	NA	NA
AWO21481.1\|3078806_3079427_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
AWO21482.1\|3079454_3081350_+	DUF2207 domain-containing protein	NA	NA	NA	NA
AWO21483.1\|3081560_3082436_+	23S rRNA pseudouridylate synthase B	NA	NA	NA	NA
AWO21484.1\|3082475_3083066_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
AWO21485.1\|3083062_3083821_-	NAD(P)-dependent oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	4.4e-06	23.9
AWO21486.1\|3084040_3085090_+\|protease	protease	A0A2H4UUF9	Bodo_saltans_virus	1.3e-21	31.5

DBSCAN-SWA_4

3893586 : 3900015

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO22223.1\|3893586_3894753_-	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	7.0e-112	54.5
AWO22224.1\|3894933_3895488_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.3e-51	57.6
AWO22225.1\|3895502_3896393_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.6e-29	34.6
AWO22226.1\|3896424_3897294_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	3.4e-111	66.7
AWO22227.1\|3897320_3898385_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	7.5e-105	54.7
AWO22228.1\|3898608_3900015_-	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	M4QQM4	Ostreococcus_lucimarinus_virus	4.7e-38	28.7

DBSCAN-SWA_5

3946581 : 4015263

Enterobacteria_phage(31.58%)

lysis,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO22255.1\|3946581_3947985_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	1.2e-33	29.4
AWO22256.1\|3947981_3948704_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	2.4e-30	33.2
AWO22257.1\|3949759_3950035_+\|transposase	IS1 family transposase	Q71TE9	Escherichia_phage	2.0e-46	98.9
AWO22258.1\|3949953_3950457_+\|transposase	IS1 family transposase	U5P0U6	Shigella_phage	3.7e-94	99.4
AWO22259.1\|3951100_3952462_+	peptidase	Q6DW11	Phage_TP	1.9e-217	99.7
AWO22260.1\|3952624_3952804_-	hypothetical protein	NA	NA	NA	NA
AWO22261.1\|3952791_3953109_-	hypothetical protein	NA	NA	NA	NA
AWO22262.1\|3953273_3954547_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	2.3e-177	99.0
AWO22263.1\|3954858_3955758_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	1.3e-12	29.0
AWO22264.1\|3955839_3956619_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
AWO22265.1\|3956718_3957759_-	galactitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA
AWO22266.1\|3957806_3959018_-	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
AWO22267.1\|3960777_3961632_-	tagatose bisphosphate family class II aldolase	NA	NA	NA	NA
AWO22268.1\|3961937_3962990_-	class I fructose-bisphosphate aldolase	NA	NA	NA	NA
AWO22269.1\|3963246_3964524_+	MFS transporter	NA	NA	NA	NA
AWO22270.1\|3964520_3965525_+	ADP-ribosylglycohydrolase family protein	A0A1S6UB21	Serratia_phage	9.9e-14	29.7
AWO22271.1\|3965521_3966487_+	sugar kinase	NA	NA	NA	NA
AWO22272.1\|3966460_3967207_-	transcriptional regulator	NA	NA	NA	NA
AWO22273.1\|3967258_3968077_-	hypothetical protein	D0R7H8	Paenibacillus_phage	1.7e-24	38.5
AWO22274.1\|3968141_3968942_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
AWO22275.1\|3968938_3969727_-	hydroxyethylthiazole kinase	NA	NA	NA	NA
AWO22276.1\|3969949_3970222_-	transcriptional regulator	NA	NA	NA	NA
AWO22277.1\|3970342_3971179_+	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA
AWO22278.1\|3971603_3972724_-\|transposase	IS3-like element ISSen4 family transposase	S5WIU1	Leptospira_phage	1.7e-51	42.8
AWO22279.1\|3972796_3972964_+	hypothetical protein	NA	NA	NA	NA
AWO22280.1\|3973823_3974372_-	molecular chaperone	NA	NA	NA	NA
AWO22281.1\|3974451_3974994_-	hypothetical protein	NA	NA	NA	NA
AWO22282.1\|3975286_3975568_-	DUF2574 domain-containing protein	NA	NA	NA	NA
AWO22283.1\|3975830_3976940_-	protein mrp	NA	NA	NA	NA
AWO22284.1\|3977071_3979105_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.8e-54	27.6
AWO22285.1\|3979245_3983040_+	DUF4132 domain-containing protein	NA	NA	NA	NA
AWO22286.1\|3986742_3987060_+	hypothetical protein	NA	NA	NA	NA
AWO22287.1\|3987366_3988455_+	MoxR family ATPase	NA	NA	NA	NA
AWO22288.1\|3988465_3990745_+	hypothetical protein	NA	NA	NA	NA
AWO22289.1\|3990737_3991874_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	3.2e-162	97.4
AWO22290.1\|3991870_3993871_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.0
AWO22291.1\|3994024_3994722_-\|transposase	IS1 family transposase	A0A077SLN4	Escherichia_phage	1.1e-131	98.7
AWO22292.1\|3994763_3995234_+	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	3.6e-75	100.0
AWO22293.1\|3995273_3995744_-	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	5.2e-82	100.0
AWO22294.1\|3995790_3996510_-	DNA-binding response regulator	NA	NA	NA	NA
AWO22295.1\|3996506_3998192_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
AWO22296.1\|3998413_3999145_+	transcriptional regulator	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
AWO22297.1\|3999204_3999312_+	hypothetical protein	NA	NA	NA	NA
AWO22298.1\|3999292_4000024_-	osmoprotectant uptake system permease	NA	NA	NA	NA
AWO22299.1\|4000028_4000955_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	30.8
AWO22300.1\|4000947_4002105_-	ABC transporter permease	NA	NA	NA	NA
AWO22301.1\|4002111_4003029_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AWO22302.1\|4003280_4005578_-	beta-glucosidase BglX	NA	NA	NA	NA
AWO22303.1\|4005773_4007489_+	lactate dehydrogenase	NA	NA	NA	NA
AWO22304.1\|4007526_4008459_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA
AWO22305.1\|4008632_4009220_-	YIP1 family protein	NA	NA	NA	NA
AWO22306.1\|4009389_4009968_+	DedA family protein	NA	NA	NA	NA
AWO22307.1\|4010097_4010859_-	SDR family oxidoreductase	NA	NA	NA	NA
AWO22308.1\|4010911_4012348_-	multidrug resistance outer membrane protein MdtQ	NA	NA	NA	NA
AWO22309.1\|4012571_4012655_+	hypothetical protein	NA	NA	NA	NA
AWO23139.1\|4012986_4013934_-\|tRNA	tRNA dihydrouridine(16) synthase DusC	NA	NA	NA	NA
AWO22310.1\|4014172_4014571_+	hypothetical protein	NA	NA	NA	NA
AWO22311.1\|4014567_4015263_+\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA

DBSCAN-SWA_6

4602527 : 4615710

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO22831.1\|4602527_4605089_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.0e-30	20.6
AWO22832.1\|4605194_4605851_+	serine/threonine protein phosphatase	A0A222YWF0	Escherichia_phage	6.2e-49	46.3
AWO22833.1\|4605901_4606669_-	DeoR family transcriptional regulator	A0A077SK06	Escherichia_phage	7.4e-70	56.3
AWO22834.1\|4606864_4607773_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
AWO22835.1\|4607769_4609032_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	1.7e-135	61.4
AWO22836.1\|4609028_4609667_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
AWO22837.1\|4609671_4610448_+	HPr family phosphocarrier protein	NA	NA	NA	NA
AWO22838.1\|4610536_4611901_+	permease	NA	NA	NA	NA
AWO22839.1\|4611994_4612987_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
AWO22840.1\|4613049_4614189_-	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
AWO22841.1\|4614328_4614955_-	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
AWO22842.1\|4614948_4615710_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP029575

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP029574

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection