CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP029590	Klebsiella pneumoniae strain DA33144 chromosome, complete genome	1 crisprs	DEDDh,cas3,csa3,DinG	10
CP029592	Klebsiella pneumoniae strain DA33144 plasmid pDA33144-5, complete sequence	0 crisprs	NA	0
CP029591	Klebsiella pneumoniae strain DA33144 plasmid pDA33144-220, complete sequence	0 crisprs	csa3	2

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP029590_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029590_1

806998-807092

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029590_1

>merge|CP029590|1|806998-807092|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>CP029590|1|1|806998-807092|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
CP029590.1\|AWO49260.1\|805327_805516_+\|hypothetical-protein	unknown	unknown	unknown
CP029590.1\|AWO45126.1\|816155_816533_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
CP029590.1\|AWO45114.1\|798627_800985_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
CP029590.1\|AWO45127.1\|816537_817386_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
CP029590.1\|AWO45118.1\|805544_806909_-\|malate-permease	unknown	unknown	gnl\|CDD\|377030
CP029590.1\|AWO45110.1\|793213_794059_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
CP029590.1\|AWO45119.1\|807233_808859_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
CP029590.1\|AWO45121.1\|809579_810407_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
CP029590.1\|AWO45113.1\|797756_798452_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
CP029590.1\|AWO45120.1\|808848_809547_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
CP029590.1\|AWO45117.1\|804825_805365_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
CP029590.1\|AWO45115.1\|801172_804079_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
CP029590.1\|AWO45116.1\|804091_804751_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
CP029590.1\|AWO45123.1\|813053_814340_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
CP029590.1\|AWO45125.1\|815331_816153_+\|ribosomal-RNA-small-subunit-methyltransferase-A	unknown	unknown	gnl\|CDD\|234708
CP029590.1\|AWO45111.1\|794396_796106_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
CP029590.1\|AWO45124.1\|814345_815335_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
CP029590.1\|AWO45128.1\|817338_817542_-\|hypothetical-protein	unknown	unknown	unknown
CP029590.1\|AWO45112.1\|796116_797619_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
CP029590.1\|AWO45122.1\|810650_812999_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158

Protein	Function_ID	Function_description	E-value
CP029590.1\|AWO45126.1\|816155_816533_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
CP029590.1\|AWO45114.1\|798627_800985_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
CP029590.1\|AWO45127.1\|816537_817386_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
CP029590.1\|AWO45118.1\|805544_806909_-\|malate-permease	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
CP029590.1\|AWO45110.1\|793213_794059_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
CP029590.1\|AWO45119.1\|807233_808859_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	2.22281e-172
CP029590.1\|AWO45121.1\|809579_810407_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
CP029590.1\|AWO45113.1\|797756_798452_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
CP029590.1\|AWO45120.1\|808848_809547_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
CP029590.1\|AWO45117.1\|804825_805365_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
CP029590.1\|AWO45115.1\|801172_804079_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
CP029590.1\|AWO45116.1\|804091_804751_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	7.5539e-160
CP029590.1\|AWO45123.1\|813053_814340_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
CP029590.1\|AWO45125.1\|815331_816153_+\|ribosomal-RNA-small-subunit-methyltransferase-A	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
CP029590.1\|AWO45111.1\|794396_796106_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
CP029590.1\|AWO45124.1\|814345_815335_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
CP029590.1\|AWO45112.1\|796116_797619_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
CP029590.1\|AWO45122.1\|810650_812999_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0

>CP029590.1|AWO45118.1|805544_806909_-|malate-permease
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>CP029590.1|AWO49260.1|805327_805516_+|hypothetical-protein
MLTPAWAGVSTDINSSPTYDKYDSAWTVMMMVAIADRALIVTLNAEHLGYRTQIFSAFRSGK
>CP029590.1|AWO45117.1|804825_805365_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>CP029590.1|AWO45116.1|804091_804751_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVALVWGHPQPAEGLVDLPLICDWPNRPMQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>CP029590.1|AWO45115.1|801172_804079_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESTDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAAIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>CP029590.1|AWO45114.1|798627_800985_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLSDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIERRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSDVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>CP029590.1|AWO45113.1|797756_798452_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQRIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>CP029590.1|AWO45112.1|796116_797619_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATAEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>CP029590.1|AWO45111.1|794396_796106_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKENVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYEDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSQAALTH
>CP029590.1|AWO45110.1|793213_794059_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVRDACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>CP029590.1|AWO45119.1|807233_808859_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLELSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEVHDAS
>CP029590.1|AWO45120.1|808848_809547_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>CP029590.1|AWO45121.1|809579_810407_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>CP029590.1|AWO45122.1|810650_812999_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>CP029590.1|AWO45123.1|813053_814340_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>CP029590.1|AWO45124.1|814345_815335_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDLDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>CP029590.1|AWO45125.1|815331_816153_+|ribosomal-RNA-small-subunit-methyltransferase-A
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>CP029590.1|AWO45126.1|816155_816533_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>CP029590.1|AWO45127.1|816537_817386_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKSLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>CP029590.1|AWO45128.1|817338_817542_-|hypothetical-protein
MFPIAGFVFFLKRSPERQIAHKRRSGKALATTRQNDAAGSPDKAQRAAIREESGRDGFAFVEAFLPV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

265423 : 332859

Cronobacter_phage(25.0%)

head,lysis,tRNA,integrase,tail,coat,terminase

attL 280958:281004|attR 329930:329976

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO44625.1\|265423_266941_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	9.5e-85	36.3
AWO44626.1\|267272_268748_-	dipeptide permease	A0A0P0IY73	Acinetobacter_phage	5.3e-48	29.0
AWO44627.1\|268807_270955_-	lysine decarboxylase CadA	NA	NA	NA	NA
AWO44628.1\|271037_272372_-	cadaverine/lysine antiporter	NA	NA	NA	NA
AWO44629.1\|272737_274306_-	transcriptional regulator CadC	NA	NA	NA	NA
AWO44630.1\|274599_274872_-	DUF1471 domain-containing protein	NA	NA	NA	NA
AWO44631.1\|274972_275893_-	lipid A biosynthesis lauroyl acyltransferase	A0A1W6JP29	Morganella_phage	5.4e-51	40.1
AWO44632.1\|276403_277270_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AWO44633.1\|277342_278647_-	citrate synthase	NA	NA	NA	NA
AWO44634.1\|279157_279328_+	ATP-NAD kinase	NA	NA	NA	NA
AWO44635.1\|279406_279808_-	hydroxyisourate hydrolase	NA	NA	NA	NA
AWO44636.1\|280203_280497_-	hypothetical protein	NA	NA	NA	NA
280958:281004	attL	NA	NA	NA	NA
AWO44637.1\|281159_281366_-	hypothetical protein	K7PGV5	Enterobacterial_phage	3.3e-09	49.2
AWO44638.1\|281475_281715_-	hypothetical protein	K7P7N3	Enterobacteria_phage	4.2e-16	51.9
AWO44639.1\|281820_282621_-	hypothetical protein	NA	NA	NA	NA
AWO44640.1\|284706_287184_-\|tail	phage tail protein	F1C5A7	Cronobacter_phage	1.4e-197	45.3
AWO44641.1\|287170_287566_-	hypothetical protein	F1C5F2	Cronobacter_phage	4.7e-36	54.8
AWO44642.1\|287562_288033_-	hypothetical protein	R9TPR6	Aeromonas_phage	1.2e-27	40.4
AWO49228.1\|288032_288452_-	hypothetical protein	A0A2P1MXB5	Escherichia_phage	1.8e-30	47.8
AWO44643.1\|288622_289036_+	hypothetical protein	G0ZNE8	Cronobacter_phage	5.0e-65	89.8
AWO44644.1\|289055_289235_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
AWO44645.1\|289275_292716_-	hypothetical protein	Q5G8W8	Enterobacteria_phage	7.3e-133	40.5
AWO44646.1\|292810_293314_-	hypothetical protein	NA	NA	NA	NA
AWO49229.1\|293416_293644_-	hypothetical protein	NA	NA	NA	NA
AWO44647.1\|293867_294056_+	hypothetical protein	NA	NA	NA	NA
AWO49230.1\|294107_294428_-	hypothetical protein	NA	NA	NA	NA
AWO44648.1\|294435_294774_-	hypothetical protein	NA	NA	NA	NA
AWO44649.1\|294910_295384_+	hypothetical protein	A0A077K9U2	Edwardsiella_phage	2.1e-14	40.6
AWO44650.1\|295420_295852_-	hypothetical protein	NA	NA	NA	NA
AWO44651.1\|296224_296530_-	hypothetical protein	NA	NA	NA	NA
AWO44652.1\|296834_297518_-	hypothetical protein	G0ZNE7	Cronobacter_phage	2.3e-75	59.7
AWO44653.1\|297570_298323_-	DNA breaking-rejoining protein	G0ZNE6	Cronobacter_phage	1.7e-42	41.8
AWO44654.1\|298391_298784_-	hypothetical protein	G0ZNE4	Cronobacter_phage	2.0e-34	51.9
AWO44655.1\|298780_299206_-	hypothetical protein	R9TPP7	Aeromonas_phage	5.1e-28	47.9
AWO44656.1\|299208_299571_-	hypothetical protein	A0A0M3LSC9	Mannheimia_phage	3.3e-20	49.2
AWO44657.1\|299570_299744_-	50S ribosomal protein L13	Q5G8X7	Enterobacteria_phage	1.2e-12	51.8
AWO44658.1\|299743_300124_-	hypothetical protein	F1C5E2	Cronobacter_phage	1.8e-29	56.1
AWO44659.1\|300126_300402_-	hypothetical protein	NA	NA	NA	NA
AWO44660.1\|300412_301507_-\|coat	phage coat protein	F1C5E1	Cronobacter_phage	2.2e-123	62.8
AWO44661.1\|301518_301947_-	hypothetical protein	F1C5E0	Cronobacter_phage	8.1e-42	60.8
AWO44662.1\|301950_303336_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	1.5e-153	59.7
AWO44663.1\|303858_304872_-\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	1.5e-110	67.5
AWO44664.1\|304804_306268_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	4.0e-149	56.1
AWO44665.1\|306280_307579_-\|terminase	PBSX family phage terminase large subunit	Q5G8Y7	Enterobacteria_phage	3.0e-241	94.3
AWO44666.1\|307562_308030_-	DUF2280 domain-containing protein	I6S1P9	Salmonella_phage	1.5e-57	73.8
AWO44667.1\|308060_308687_-	hypothetical protein	I6S676	Salmonella_phage	8.4e-104	84.9
AWO44668.1\|308803_309415_+	hypothetical protein	NA	NA	NA	NA
AWO49231.1\|309536_309995_+	hypothetical protein	NA	NA	NA	NA
AWO44669.1\|310095_310290_-	hypothetical protein	NA	NA	NA	NA
AWO44670.1\|310568_311036_-\|lysis	lysis protein	A0A192Y689	Salmonella_phage	1.0e-53	71.6
AWO44671.1\|311032_311563_-	lysozyme	G9L6J6	Escherichia_phage	5.4e-80	79.7
AWO44672.1\|311565_311814_-\|lysis	lysis protein	NA	NA	NA	NA
AWO44673.1\|312241_312766_+	hypothetical protein	NA	NA	NA	NA
AWO44674.1\|313110_313800_-	antiterminator	I6PDF8	Cronobacter_phage	1.9e-56	54.5
AWO44675.1\|313796_313937_-	YlcG family protein	NA	NA	NA	NA
AWO44676.1\|313933_314569_-	NinG family protein	M9NYX8	Enterobacteria_phage	2.2e-80	77.0
AWO44677.1\|314561_314732_-	NinE family protein	G8C7V4	Escherichia_phage	5.7e-15	73.2
AWO44678.1\|314712_315180_-	recombination protein NinB	Q8VNP6	Enterobacteria_phage	1.5e-33	46.5
AWO44679.1\|315370_315628_-	DNA polymerase III subunit theta	G8C7V1	Escherichia_phage	6.4e-26	74.0
AWO44680.1\|315956_316154_-	hypothetical protein	NA	NA	NA	NA
AWO44681.1\|316146_316413_-	eaa protein	A0A077SLR0	Escherichia_phage	4.6e-27	69.8
AWO44682.1\|317424_317943_-	hypothetical protein	G9L6B3	Escherichia_phage	1.8e-91	92.7
AWO44683.1\|318445_318643_-	hypothetical protein	NA	NA	NA	NA
AWO44684.1\|318635_318899_-	DUF4752 domain-containing protein	T1S9K2	Salmonella_phage	1.3e-29	75.6
AWO44685.1\|318895_319318_-	hypothetical protein	R9TME7	Aeromonas_phage	1.5e-11	39.9
AWO44686.1\|319314_319617_-	MarR family transcriptional regulator	NA	NA	NA	NA
AWO44687.1\|319613_320351_-	Replication protein P	A0A0K2FIT1	Enterobacteria_phage	6.9e-65	55.2
AWO49232.1\|320347_321313_-	replication protein	K7PGZ0	Enterobacteria_phage	5.1e-60	78.9
AWO44688.1\|321372_322170_-	DNA-binding protein	A0A2H4J902	uncultured_Caudovirales_phage	2.8e-88	67.9
AWO44689.1\|322255_322477_-	transcriptional regulator	NA	NA	NA	NA
AWO44690.1\|322516_322750_-	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	3.0e-22	70.4
AWO44691.1\|322854_323544_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.0e-86	70.6
AWO49233.1\|323566_323686_+	hypothetical protein	NA	NA	NA	NA
AWO44692.1\|323884_324601_+	hypothetical protein	NA	NA	NA	NA
AWO44693.1\|324591_325137_+	PIN domain-containing protein	NA	NA	NA	NA
AWO44694.1\|325185_325389_-	hypothetical protein	A0A192Y6Q5	Salmonella_phage	1.0e-18	71.6
AWO44695.1\|325816_326011_+	hypothetical protein	NA	NA	NA	NA
AWO44696.1\|326100_326385_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.7e-40	81.9
AWO44697.1\|326401_327148_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	7.0e-65	67.7
AWO44698.1\|327144_327768_+	exonuclease	A0A0S2SY31	Pseudomonas_phage	5.8e-57	59.2
AWO44699.1\|327796_328324_+	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	1.1e-56	61.0
AWO44700.1\|328320_328539_+	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	4.4e-12	52.2
AWO49234.1\|328540_328876_+	DNA-binding protein	NA	NA	NA	NA
AWO49235.1\|328872_329916_+\|integrase	site-specific integrase	G8C7S0	Escherichia_phage	2.2e-178	85.9
AWO44701.1\|329985_330309_-	hypothetical protein	NA	NA	NA	NA
329930:329976	attR	NA	NA	NA	NA
AWO44702.1\|330347_331214_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
AWO44703.1\|331215_331428_+	hypothetical protein	NA	NA	NA	NA
AWO44704.1\|331473_332859_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4

DBSCAN-SWA_2

2997567 : 3057046

Enterobacteria_phage(14.58%)

holin,head,tRNA,protease,tail,capsid,portal,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO47125.1\|2997567_2998986_+\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
AWO47126.1\|2999037_2999430_-	hypothetical protein	NA	NA	NA	NA
AWO47127.1\|2999433_2999787_-	hypothetical protein	NA	NA	NA	NA
AWO47128.1\|3000408_3002580_+	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
AWO47129.1\|3002628_3003831_-	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA
AWO47130.1\|3004177_3005419_+	divalent metal cation transporter	NA	NA	NA	NA
AWO47131.1\|3005476_3005830_-	DUF2502 domain-containing protein	NA	NA	NA	NA
AWO47132.1\|3005960_3006953_-	L-glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA
AWO49337.1\|3007133_3008795_+	indolepyruvate decarboxylase	NA	NA	NA	NA
AWO47133.1\|3008791_3010027_-	ion channel protein	NA	NA	NA	NA
AWO47134.1\|3010290_3011256_+	glucokinase	NA	NA	NA	NA
AWO49338.1\|3011309_3012047_-	DNA-binding response regulator	A0A2R2ZGH8	Clostridioides_phage	1.5e-14	26.3
AWO47135.1\|3012058_3013756_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.7e-47	28.5
AWO47136.1\|3013864_3014050_-	phytanoyl-CoA dioxygenase	NA	NA	NA	NA
AWO47137.1\|3014138_3015353_+	alanine transaminase	NA	NA	NA	NA
AWO49339.1\|3015423_3015495_-	membrane protein YpdK	NA	NA	NA	NA
AWO47138.1\|3015833_3017030_-	cyanate transporter	NA	NA	NA	NA
AWO47139.1\|3017026_3017485_-	nucleoside deaminase	A0A0B5J096	Pandoravirus	7.2e-12	33.1
AWO47140.1\|3017617_3018526_+	transcriptional regulator CynR	A0A2P0ZL89	Lactobacillus_phage	4.6e-10	24.2
AWO47141.1\|3018535_3019417_-	hypothetical protein	A0A2H4JEC4	uncultured_Caudovirales_phage	1.5e-05	56.8
AWO47142.1\|3019783_3020266_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
AWO47143.1\|3020784_3021954_+	DUF4102 domain-containing protein	A0A2R2Z2Y0	Escherichia_phage	4.3e-202	86.0
AWO47144.1\|3021986_3022925_+	DUF2971 domain-containing protein	NA	NA	NA	NA
AWO47145.1\|3022940_3023126_-	hypothetical protein	G3CFG7	Escherichia_phage	1.8e-14	63.2
AWO47146.1\|3023133_3023781_-	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	1.2e-44	57.3
AWO47147.1\|3023780_3023993_-	molecular chaperone DnaJ	R9TNC2	Aeromonas_phage	8.6e-37	97.1
AWO47148.1\|3024584_3025661_-	DGQHR domain-containing protein	T1SBJ4	Salmonella_phage	1.5e-148	73.8
AWO47149.1\|3025660_3026446_-	hypothetical protein	A4JX52	Burkholderia_virus	7.6e-62	50.6
AWO47150.1\|3026445_3026745_-	hypothetical protein	NA	NA	NA	NA
AWO49340.1\|3027123_3027363_-	hypothetical protein	K7PGV8	Enterobacterial_phage	5.5e-24	79.7
AWO49341.1\|3027591_3028239_-	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	9.3e-74	63.0
AWO47151.1\|3028343_3028541_+	hypothetical protein	H9C161	Pectobacterium_phage	2.7e-16	66.1
AWO47152.1\|3028566_3029028_+	hypothetical protein	K7PJS5	Enterobacterial_phage	1.7e-69	88.2
AWO47153.1\|3029265_3029478_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	6.4e-16	70.9
AWO47154.1\|3029434_3030349_+	transcriptional regulator	H2DE83	Erwinia_phage	2.4e-30	57.3
AWO47155.1\|3030345_3031155_+	DNA methylase	A0A1C9II58	Salmonella_phage	1.3e-109	68.9
AWO47156.1\|3031164_3031542_+	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	5.1e-48	73.6
AWO47157.1\|3031554_3032535_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	8.4e-135	66.9
AWO47158.1\|3032548_3033127_+	DUF1133 domain-containing protein	A0A0U2S606	Escherichia_phage	2.2e-50	56.7
AWO47159.1\|3033233_3033839_+	hypothetical protein	NA	NA	NA	NA
AWO47160.1\|3034078_3034465_+	hypothetical protein	A0A192Y8P2	Salmonella_phage	1.6e-57	90.6
AWO47161.1\|3034451_3034733_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	4.8e-19	48.4
AWO47162.1\|3034732_3035362_+	glycoside hydrolase family 19 protein	F1C591	Cronobacter_phage	2.5e-87	75.4
AWO47163.1\|3035364_3035640_+	hypothetical protein	G8C7W1	Escherichia_phage	1.0e-05	80.6
AWO47164.1\|3035590_3035788_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	3.9e-23	89.5
AWO47165.1\|3035900_3036089_+	hypothetical protein	A0A0P0IKM2	Acinetobacter_phage	3.2e-19	77.0
AWO47166.1\|3036126_3036252_+	hypothetical protein	M1FJ79	Enterobacteria_phage	2.4e-07	66.7
AWO47167.1\|3036287_3036743_-	hypothetical protein	NA	NA	NA	NA
AWO47168.1\|3036815_3037166_+	HNH endonuclease	K7PHK9	Enterobacteria_phage	4.1e-52	81.0
AWO47169.1\|3037324_3037822_+\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	7.4e-63	71.3
AWO47170.1\|3037825_3039577_+\|terminase	terminase large subunit	A0A1P8DTK0	Proteus_phage	3.3e-251	72.0
AWO47171.1\|3039724_3040951_+\|portal	phage portal protein	Q8SBI0	Shigella_phage	2.5e-208	85.3
AWO47172.1\|3040943_3041543_+\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	1.0e-90	82.5
AWO47173.1\|3041552_3042791_+\|capsid	phage major capsid protein	Q8SBH8	Shigella_phage	3.9e-153	67.0
AWO47174.1\|3042868_3043186_+\|head,tail	phage gp6-like head-tail connector protein	A0A1W6JNZ5	Morganella_phage	7.4e-24	52.9
AWO47175.1\|3043194_3043533_+\|head,tail	head-tail adaptor protein	A0A2H4JHK5	uncultured_Caudovirales_phage	6.6e-39	68.8
AWO47176.1\|3043529_3043979_+	hypothetical protein	Q9MCS9	Enterobacteria_phage	6.7e-63	82.6
AWO47177.1\|3043975_3044323_+	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	2.8e-32	63.7
AWO47178.1\|3044379_3045084_+\|tail	phage tail protein	K7PHL2	Enterobacterial_phage	1.6e-79	66.5
AWO47179.1\|3045114_3045519_+\|tail	phage tail protein	K7PKV6	Enterobacterial_phage	8.5e-33	57.7
AWO47180.1\|3045521_3045827_+	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	4.7e-28	64.6
AWO47181.1\|3045900_3046134_+	hypothetical protein	K7PH16	Enterobacteria_phage	1.9e-08	47.2
AWO47182.1\|3046194_3049581_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	4.7e-302	57.7
AWO47183.1\|3049602_3050076_+	hypothetical protein	A0A286S298	Klebsiella_phage	1.1e-55	62.7
AWO47184.1\|3050062_3050539_+	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	3.4e-49	63.9
AWO47185.1\|3050551_3050932_+	nitrite transporter	A0A286S2A6	Klebsiella_phage	2.5e-58	81.0
AWO47186.1\|3050928_3054006_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	62.1
AWO47187.1\|3056051_3056852_+	hypothetical protein	NA	NA	NA	NA
AWO47188.1\|3056863_3057046_+	Hin recombinase	A0A286S1P7	Klebsiella_phage	1.5e-18	88.9

DBSCAN-SWA_3

3281955 : 3288860

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO49352.1\|3281955_3282819_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
AWO47381.1\|3282829_3283603_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
AWO49353.1\|3283843_3284737_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
AWO47382.1\|3284982_3286344_-	U32 family peptidase	Q6DW11	Phage_TP	1.8e-207	94.8
AWO47383.1\|3286662_3287385_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
AWO47384.1\|3287381_3288860_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_4

3558354 : 3627045

Salmonella_phage(26.56%)

head,lysis,plate,tail,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO47620.1\|3558354_3559650_+	MFS transporter	Q6JIH2	Burkholderia_virus	9.6e-62	36.8
AWO47621.1\|3559664_3560471_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AWO47622.1\|3560711_3561974_-	DUF3596 domain-containing protein	A0A286S1S8	Klebsiella_phage	1.7e-233	95.0
AWO47623.1\|3562016_3562262_-	excisionase	A0A286S2A4	Klebsiella_phage	1.9e-35	92.1
AWO47624.1\|3562265_3562484_-	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	2.0e-12	52.2
AWO47625.1\|3562480_3562690_-	hypothetical protein	NA	NA	NA	NA
AWO47626.1\|3562686_3562992_-	hypothetical protein	A0A1B3AZN4	Gordonia_phage	7.4e-05	35.6
AWO47627.1\|3562988_3563180_-	DUF1382 domain-containing protein	A0A0P0ZC60	Stx2-converting_phage	1.6e-13	64.4
AWO47628.1\|3563176_3563941_-	hypothetical protein	Q71T76	Escherichia_phage	2.7e-72	58.7
AWO47629.1\|3564157_3564928_-	dcm methylase	D5LH17	Escherichia_phage	3.2e-65	51.0
AWO47630.1\|3564924_3565452_-	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	1.3e-57	62.2
AWO47631.1\|3565448_3565607_-	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	6.7e-10	58.8
AWO47632.1\|3565603_3566290_-	exonuclease	A0A0M3ULE0	Salmonella_phage	4.8e-113	90.6
AWO47633.1\|3566282_3566669_-	hypothetical protein	A0A221SAP1	Ralstonia_phage	1.4e-16	52.8
AWO47634.1\|3566899_3567745_-	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	2.6e-68	58.8
AWO47635.1\|3567760_3568045_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	4.3e-39	78.7
AWO47636.1\|3568134_3568329_-	hypothetical protein	NA	NA	NA	NA
AWO47637.1\|3568773_3569406_-	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	9.2e-34	40.0
AWO47638.1\|3569505_3569721_+	XRE family transcriptional regulator	Q716D6	Shigella_phage	4.2e-15	60.9
AWO47639.1\|3569770_3570091_+	hypothetical protein	A0A0M4RU01	Salmonella_phage	7.7e-37	69.8
AWO47640.1\|3570177_3570975_+	DNA-binding protein	A0A2H4J902	uncultured_Caudovirales_phage	2.8e-88	67.9
AWO49369.1\|3571034_3572000_+	replication protein	K7PGZ0	Enterobacteria_phage	5.1e-60	78.9
AWO47641.1\|3571996_3572734_+	Replication protein P	A0A0K2FIT1	Enterobacteria_phage	6.9e-65	55.2
AWO47642.1\|3572730_3573033_+	MarR family transcriptional regulator	NA	NA	NA	NA
AWO47643.1\|3573029_3573452_+	hypothetical protein	R9TME7	Aeromonas_phage	1.5e-11	39.9
AWO47644.1\|3573448_3573709_+	DUF4752 domain-containing protein	T1S9K2	Salmonella_phage	1.6e-29	75.6
AWO47645.1\|3574240_3574453_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	8.1e-11	45.5
AWO47646.1\|3574449_3574740_+	hypothetical protein	F1C5B5	Cronobacter_phage	5.7e-07	50.9
AWO49370.1\|3575081_3575495_+	DUF551 domain-containing protein	A0A077SK54	Escherichia_phage	1.1e-11	34.6
AWO47647.1\|3575494_3575743_+	hypothetical protein	NA	NA	NA	NA
AWO47648.1\|3575995_3576451_+	hypothetical protein	K7P7B8	Enterobacteria_phage	4.0e-55	68.2
AWO47649.1\|3576450_3576621_+	NinE family protein	G8C7V4	Escherichia_phage	1.7e-14	73.2
AWO47650.1\|3576613_3577252_+	hypothetical protein	H6WRY9	Salmonella_phage	1.2e-73	68.4
AWO47651.1\|3577248_3577389_+	YlcG family protein	NA	NA	NA	NA
AWO47652.1\|3577385_3578195_+	antitermination protein	M9NZB0	Enterobacteria_phage	1.9e-116	75.1
AWO47653.1\|3579380_3579695_+	hypothetical protein	H6WRZ3	Salmonella_phage	6.3e-44	86.1
AWO47654.1\|3579697_3580201_+	lysozyme	A0A1V0E5Q7	Salmonella_phage	5.0e-75	78.4
AWO47655.1\|3580197_3580665_+\|lysis	lysis protein	Q76H63	Enterobacteria_phage	7.5e-57	73.5
AWO47656.1\|3580873_3581650_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.2e-12	64.2
AWO47657.1\|3581600_3583001_+\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	7.2e-188	69.2
AWO47658.1\|3583238_3584690_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	7.2e-191	68.4
AWO49371.1\|3584745_3585294_+	hypothetical protein	A0A0M4REK0	Salmonella_phage	1.0e-49	56.9
AWO47659.1\|3585339_3585534_+	hypothetical protein	NA	NA	NA	NA
AWO47660.1\|3585543_3586746_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	5.3e-107	52.8
AWO47661.1\|3586749_3587244_+	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	2.1e-49	61.5
AWO47662.1\|3587255_3588197_+	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	7.8e-138	77.4
AWO47663.1\|3588236_3588518_+	hypothetical protein	NA	NA	NA	NA
AWO47664.1\|3588486_3588906_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	1.1e-40	61.5
AWO47665.1\|3588902_3589409_+	hypothetical protein	A0A2H4J488	uncultured_Caudovirales_phage	2.4e-16	37.2
AWO47666.1\|3589408_3589795_+\|head,tail	head-tail adaptor	A0A2H4J1A4	uncultured_Caudovirales_phage	2.8e-49	79.0
AWO47667.1\|3589889_3590330_+	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
AWO47668.1\|3590333_3591479_+	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	77.2
AWO47669.1\|3591488_3591932_+	DUF3277 domain-containing protein	A0A0M5M1K6	Salmonella_phage	2.1e-61	80.0
AWO47670.1\|3591935_3592355_+	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	8.8e-41	63.4
AWO49372.1\|3592396_3592549_+	NTP pyrophosphohydrolase	A0A2H4J1A2	uncultured_Caudovirales_phage	1.4e-17	84.0
AWO47671.1\|3592538_3594458_+	hypothetical protein	A0A0M4REK7	Salmonella_phage	3.0e-192	72.3
AWO47672.1\|3594457_3595057_+	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
AWO47673.1\|3595057_3595360_+	hypothetical protein	A0A0M4R5B7	Salmonella_phage	3.4e-26	53.0
AWO47674.1\|3595362_3596394_+	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	3.5e-99	54.0
AWO49373.1\|3596494_3596728_+	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	8.9e-19	52.6
AWO47675.1\|3596766_3597273_+	hypothetical protein	A0A0M3ULK2	Salmonella_phage	3.1e-32	47.6
AWO47676.1\|3597311_3598067_+	translation initiation factor IF-2	A0A0M5M1K7	Salmonella_phage	4.0e-84	66.0
AWO47677.1\|3598066_3598420_+	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	1.8e-50	79.5
AWO47678.1\|3598419_3599619_+	hypothetical protein	A0A0M4RD32	Salmonella_phage	1.3e-161	75.3
AWO47679.1\|3599615_3600389_+	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	1.8e-68	51.0
AWO47680.1\|3600388_3601162_+	hypothetical protein	A0A248SL44	Klebsiella_phage	3.0e-26	49.7
AWO47681.1\|3601180_3603160_+	hypothetical protein	A0A286S1P0	Klebsiella_phage	6.9e-27	28.0
AWO47682.1\|3603169_3603970_+	hypothetical protein	NA	NA	NA	NA
AWO47683.1\|3604075_3604315_+	hypothetical protein	K7P7N3	Enterobacteria_phage	1.1e-16	54.4
AWO47684.1\|3604314_3604632_+	hypothetical protein	K7PGV5	Enterobacterial_phage	1.8e-22	52.0
AWO47685.1\|3605606_3606089_-	cold shock domain-containing protein	NA	NA	NA	NA
AWO47686.1\|3606280_3606979_+	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	2.6e-05	27.2
AWO49374.1\|3607004_3607544_-	DUF2058 domain-containing protein	NA	NA	NA	NA
AWO47687.1\|3607658_3607988_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
AWO47688.1\|3608326_3608506_-	hypothetical protein	NA	NA	NA	NA
AWO47689.1\|3608553_3609894_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AWO47690.1\|3609890_3610544_+	type VI secretion system protein ImpK	NA	NA	NA	NA
AWO47691.1\|3610547_3612245_+	cell envelope biogenesis protein OmpA	NA	NA	NA	NA
AWO47692.1\|3612703_3615331_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	2.3e-17	31.5
AWO47693.1\|3615333_3617361_+	LysM peptidoglycan-binding domain-containing protein	A0A2H4JIA8	uncultured_Caudovirales_phage	2.6e-74	31.6
AWO47694.1\|3618764_3619172_+	hypothetical protein	NA	NA	NA	NA
AWO47695.1\|3619197_3619455_+	PAAR domain-containing protein	NA	NA	NA	NA
AWO47696.1\|3619459_3620671_+	hypothetical protein	NA	NA	NA	NA
AWO47697.1\|3621135_3624102_+	type VI secretion protein VasK	NA	NA	NA	NA
AWO47698.1\|3624235_3625999_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AWO47699.1\|3625998_3627045_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_5

4297142 : 4308030

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO48328.1\|4297142_4300250_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
AWO48329.1\|4300304_4301570_+	MFS transporter	NA	NA	NA	NA
AWO48330.1\|4301600_4302689_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.8e-210	99.7
AWO48331.1\|4302775_4303036_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
AWO48332.1\|4303333_4304194_+	class A broad-spectrum beta-lactamase SHV-1	A0A077SL40	Escherichia_phage	4.4e-156	99.7
AWO48333.1\|4304214_4304976_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AWO48334.1\|4304966_4305200_+	hypothetical protein	NA	NA	NA	NA
AWO48335.1\|4305237_4306140_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
AWO48336.1\|4306151_4307417_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.3
AWO48337.1\|4307409_4308030_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_6

4566620 : 4571048

uncultured_Caudovirales_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO48567.1\|4566620_4566827_+	hypothetical protein	A0A2H4J5W2	uncultured_Caudovirales_phage	3.5e-19	64.6
AWO48568.1\|4566826_4567279_+	hypothetical protein	A0A2H4J5W2	uncultured_Caudovirales_phage	2.7e-48	57.3
AWO48569.1\|4567341_4568073_-	hypothetical protein	NA	NA	NA	NA
AWO48570.1\|4568129_4569395_-	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	5.1e-209	83.4
AWO48571.1\|4569396_4569816_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.4e-35	57.5
AWO48572.1\|4570365_4570788_-	hypothetical protein	K7P834	Enterobacteria_phage	2.3e-25	44.5
AWO48573.1\|4570865_4571048_-	Hin recombinase	A0A286S1P7	Klebsiella_phage	5.3e-19	87.0

DBSCAN-SWA_7

4578303 : 4599546

Pseudomonas_phage(27.27%)

holin,tail,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO49417.1\|4578303_4581219_-\|tail	phage tail protein	A0A2H4J107	uncultured_Caudovirales_phage	4.9e-90	34.2
AWO48578.1\|4582264_4582432_-	hypothetical protein	NA	NA	NA	NA
AWO48579.1\|4582599_4583082_-	hypothetical protein	NA	NA	NA	NA
AWO48580.1\|4583136_4584309_-	Ig domain-containing protein	A0A0D4DBN5	Acinetobacter_phage	1.2e-23	27.0
AWO48581.1\|4584332_4584725_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
AWO48582.1\|4584721_4585273_-	hypothetical protein	G8C7Q1	Escherichia_phage	5.9e-29	39.9
AWO48583.1\|4585274_4585658_-	glutamate 5-kinase	A0A0S2SYG4	Pseudomonas_phage	1.6e-20	43.7
AWO48584.1\|4585644_4585878_-	hypothetical protein	A0A1V0E8A3	Vibrio_phage	6.4e-09	49.2
AWO48585.1\|4585887_4586142_-	hypothetical protein	J9Q7U0	Salmonella_phage	3.0e-20	51.2
AWO48586.1\|4586143_4586539_-	protein singed	A0A0S2SYB7	Pseudomonas_phage	4.3e-13	43.3
AWO48587.1\|4586860_4587814_-	hypothetical protein	A0A1B0VMF8	Pseudomonas_phage	6.5e-132	74.4
AWO48588.1\|4587824_4588604_-	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	2.7e-67	64.0
AWO48589.1\|4588700_4588964_-	hypothetical protein	NA	NA	NA	NA
AWO48590.1\|4589116_4590229_-	hypothetical protein	I6PD76	Cronobacter_phage	1.6e-110	55.1
AWO48591.1\|4590212_4591613_-	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	2.4e-127	53.5
AWO48592.1\|4591614_4592928_-\|terminase	terminase	A0A0S2SYF1	Pseudomonas_phage	2.2e-183	73.6
AWO48593.1\|4592911_4593907_-\|terminase	terminase small subunit	Q5QF76	Pseudomonas_virus	1.5e-38	45.5
AWO48594.1\|4594850_4595045_-	hypothetical protein	A0A286SGR9	Klebsiella_phage	1.4e-25	89.1
AWO48595.1\|4594995_4595271_-	hypothetical protein	A0A286N2Q8	Klebsiella_phage	2.2e-08	72.5
AWO48596.1\|4595267_4595612_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.6e-38	79.8
AWO48597.1\|4595608_4596148_-	hypothetical protein	A0A286N2Q6	Klebsiella_phage	2.3e-102	100.0
AWO48598.1\|4596144_4596456_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	1.1e-40	83.5
AWO48599.1\|4596587_4596812_-	hypothetical protein	NA	NA	NA	NA
AWO48600.1\|4597201_4598023_-	antitermination protein	K7PKS8	Enterobacteria_phage	5.1e-85	60.6
AWO48601.1\|4598019_4598160_-	YlcG family protein	NA	NA	NA	NA
AWO48602.1\|4598156_4598738_-	protein NinG	E7C9S3	Salmonella_phage	2.7e-40	44.8
AWO48603.1\|4598740_4598947_-	hypothetical protein	H6WRY8	Salmonella_phage	2.4e-23	71.2
AWO48604.1\|4598946_4599546_-	DUF1367 domain-containing protein	K7PKS6	Enterobacteria_phage	3.8e-90	79.4

DBSCAN-SWA_8

4603978 : 4619610

Salmonella_phage(47.37%)

integrase

attL 4602736:4602749|attR 4619899:4619912

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4602736:4602749	attL	NA	NA	NA	NA
AWO48610.1\|4603978_4604179_-	hypothetical protein	A0A1U8QWK2	Salmonella_phage	3.2e-09	57.5
AWO48611.1\|4604654_4604891_-	hypothetical protein	A0A2R2Z309	Escherichia_phage	7.1e-32	90.7
AWO48612.1\|4604883_4605087_-	hypothetical protein	A0A2R2Z313	Escherichia_phage	2.6e-30	92.5
AWO48613.1\|4605083_4605452_-	DUF977 domain-containing protein	H6WRX9	Salmonella_phage	4.9e-11	43.0
AWO48614.1\|4605444_4606188_-	Replication protein P	A0A0M3ULE2	Salmonella_phage	3.1e-65	55.2
AWO48615.1\|4606184_4607105_-	hypothetical protein	K7PGZ0	Enterobacteria_phage	1.7e-92	61.3
AWO48616.1\|4607455_4607992_-	hypothetical protein	M9NZI6	Enterobacteria_phage	6.3e-60	68.9
AWO48617.1\|4607994_4608222_-	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	3.4e-15	50.0
AWO48618.1\|4608326_4608761_+	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	2.3e-15	39.0
AWO48619.1\|4608944_4609043_+	hypothetical protein	NA	NA	NA	NA
AWO48620.1\|4609149_4609341_+	DUF1482 domain-containing protein	NA	NA	NA	NA
AWO48621.1\|4609349_4609505_+	hypothetical protein	H6WRX3	Salmonella_phage	1.2e-14	75.0
AWO48622.1\|4609642_4612681_+	exodeoxyribonuclease	H6WRX1	Salmonella_phage	1.0e-292	57.2
AWO48623.1\|4612693_4613803_+	enterohemolysin	H6WRX0	Salmonella_phage	9.4e-183	85.9
AWO48624.1\|4613837_4614176_+	hypothetical protein	NA	NA	NA	NA
AWO48625.1\|4614168_4614780_+	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	4.9e-40	75.3
AWO48626.1\|4614776_4615085_+	hypothetical protein	I6PD68	Cronobacter_phage	4.6e-23	55.9
AWO49419.1\|4615092_4615332_+	DUF4060 domain-containing protein	M9P0E0	Enterobacteria_phage	8.0e-23	70.1
AWO48627.1\|4615341_4615656_+	hypothetical protein	K7PM28	Enterobacteria_phage	1.6e-10	50.8
AWO48628.1\|4615552_4616740_-\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	4.2e-120	52.2
AWO48629.1\|4616916_4617807_+	peptide ABC transporter permease SapC	NA	NA	NA	NA
AWO48630.1\|4617806_4618799_+	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
AWO48631.1\|4618800_4619610_+	peptide ABC transporter ATP-binding protein SapF	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	28.9
4619899:4619912	attR	NA	NA	NA	NA

DBSCAN-SWA_9

4738982 : 4785120

Enterobacteria_phage(54.55%)

plate,tRNA,integrase,tail,capsid,portal,terminase

attL 4744210:4744227|attR 4781386:4781403

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO48745.1\|4738982_4739483_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
AWO48746.1\|4739599_4740046_+	DUF441 domain-containing protein	NA	NA	NA	NA
AWO49422.1\|4740029_4740821_-	AraC family transcriptional regulator	NA	NA	NA	NA
AWO48747.1\|4740922_4742107_+	cyanate MFS transporter	NA	NA	NA	NA
AWO48748.1\|4742138_4742831_-	hypothetical protein	NA	NA	NA	NA
AWO48749.1\|4742976_4743486_+	DUF523 domain-containing protein	NA	NA	NA	NA
AWO48750.1\|4743472_4743829_+	DUF488 domain-containing protein	NA	NA	NA	NA
AWO48751.1\|4743818_4744058_-	DUF333 domain-containing protein	NA	NA	NA	NA
4744210:4744227	attL	NA	NA	NA	NA
AWO48752.1\|4744322_4744574_-	hypothetical protein	A0A2I8TV89	Erwinia_phage	3.4e-08	49.2
AWO48753.1\|4744617_4745757_-	phage late control D family protein	B9A7A9	Serratia_phage	9.4e-146	72.3
AWO48754.1\|4745911_4747084_+\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	5.0e-158	70.7
AWO48755.1\|4747083_4747599_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	2.2e-57	61.2
AWO48756.1\|4747644_4747962_+\|tail	phage tail protein	B9A7B2	Serratia_phage	1.0e-17	54.8
AWO49423.1\|4747961_4748120_+\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	3.5e-11	63.3
AWO48757.1\|4748106_4751082_+\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	2.0e-219	46.4
AWO48758.1\|4751097_4751571_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	6.6e-53	66.9
AWO48759.1\|4752034_4752697_-	hypothetical protein	NA	NA	NA	NA
AWO48760.1\|4752714_4753938_-	DUF262 domain-containing protein	A0A1V0S9I8	Catovirus	7.8e-05	27.5
AWO48761.1\|4754537_4755635_-\|tail	phage tail protein	G4KKN6	Yersinia_phage	5.2e-08	47.8
AWO48762.1\|4755634_4755847_-	hypothetical protein	NA	NA	NA	NA
AWO48763.1\|4755843_4758870_-\|tail	phage tail protein I	D5LGZ2	Escherichia_phage	6.4e-24	40.7
AWO48764.1\|4758859_4759783_-\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	7.6e-53	43.6
AWO48765.1\|4759784_4760135_-\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	1.8e-23	58.2
AWO48766.1\|4760131_4760719_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	6.9e-60	60.5
AWO48767.1\|4760715_4761351_-	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	4.6e-57	51.9
AWO48768.1\|4761347_4761815_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	4.5e-46	58.8
AWO49424.1\|4761996_4762326_-	DUF2570 domain-containing protein	NA	NA	NA	NA
AWO48769.1\|4762337_4762883_-	lysozyme	Q1I0Z1	Pasteurella_virus	6.3e-31	43.0
AWO48770.1\|4762879_4763164_-\|tail	phage tail protein	NA	NA	NA	NA
AWO48771.1\|4763154_4763355_-\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	1.6e-16	63.1
AWO48772.1\|4763354_4763870_-\|capsid	capsid assembly protein	A0A0A7NPU2	Enterobacteria_phage	2.7e-39	48.8
AWO48773.1\|4763982_4764840_-\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	9.8e-71	61.3
AWO48774.1\|4764889_4765924_-\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	3.6e-96	50.0
AWO48775.1\|4765933_4766773_-\|capsid	phage capsid protein	A0A0A7NRY7	Enterobacteria_phage	4.3e-95	66.3
AWO48776.1\|4766929_4768657_+	oxidoreductase	A0A0A7NV54	Enterobacteria_phage	1.0e-228	67.1
AWO48777.1\|4768650_4769712_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	9.1e-143	68.1
AWO48778.1\|4770556_4771348_+	hypothetical protein	NA	NA	NA	NA
AWO48779.1\|4771347_4773618_+	DNA helicase UvrD	NA	NA	NA	NA
AWO48780.1\|4776507_4777464_-	DNA adenine methylase	A0A0M4QWR0	Salmonella_phage	1.5e-83	54.4
AWO48781.1\|4777460_4777688_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	2.5e-05	41.0
AWO48782.1\|4777696_4778263_-	3'-5' exoribonuclease	D4HTX2	Vibrio_phage	2.8e-13	33.2
AWO48783.1\|4778259_4778484_-	hypothetical protein	NA	NA	NA	NA
AWO48784.1\|4778552_4778825_-	hypothetical protein	NA	NA	NA	NA
AWO48785.1\|4778840_4779218_-	hypothetical protein	NA	NA	NA	NA
AWO48786.1\|4779233_4779452_-	DUF4761 domain-containing protein	A0A0M5M1I3	Salmonella_phage	3.6e-06	49.1
AWO48787.1\|4779472_4779751_-	hypothetical protein	Q1JS60	Enterobacteria_phage	6.2e-43	88.9
AWO48788.1\|4779871_4780171_+	XRE family transcriptional regulator	Q1JS61	Enterobacteria_phage	6.5e-38	77.8
AWO48789.1\|4780286_4781270_+\|integrase	integrase	Q83VS6	Escherichia_phage	1.4e-150	79.8
AWO48790.1\|4781534_4782548_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.9e-12	29.0
4781386:4781403	attR	NA	NA	NA	NA
AWO48791.1\|4782605_4782707_+	hypothetical protein	NA	NA	NA	NA
AWO49425.1\|4782664_4782781_+	hypothetical protein	NA	NA	NA	NA
AWO48792.1\|4782898_4783024_+	hypothetical protein	NA	NA	NA	NA
AWO48793.1\|4783083_4783347_-	DUF2534 domain-containing protein	NA	NA	NA	NA
AWO48794.1\|4783477_4784116_-	leucine efflux protein	NA	NA	NA	NA
AWO48795.1\|4784205_4785120_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4

DBSCAN-SWA_10

5047620 : 5057094

Brazilian_cedratvirus(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO49024.1\|5047620_5049342_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
AWO49441.1\|5049386_5050088_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AWO49025.1\|5050441_5050660_+	translation initiation factor IF-1	NA	NA	NA	NA
AWO49026.1\|5050790_5053070_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
AWO49027.1\|5053100_5053418_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
AWO49028.1\|5053743_5053965_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AWO49029.1\|5053898_5054102_-	hypothetical protein	NA	NA	NA	NA
AWO49030.1\|5054041_5055982_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
AWO49031.1\|5055978_5057094_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP029591

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

46102 : 69270

Salmonella_phage(30.0%)

transposase,integrase,protease

attL 50681:50740|attR 76805:77624

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO49487.1\|46102_46756_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AWO49488.1\|46975_47440_+	mRNA interferase PemK	NA	NA	NA	NA
AWO49489.1\|47436_47541_+	hypothetical protein	NA	NA	NA	NA
AWO49490.1\|47576_50474_-\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	4.2e-182	37.8
50681:50740	attL	NA	NA	NA	NA
AWO49491.1\|50743_51448_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWO49492.1\|51569_52475_+	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
AWO49493.1\|52471_53710_+	MFS transporter	NA	NA	NA	NA
AWO49494.1\|53709_54294_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AWO49495.1\|54239_54596_+	hypothetical protein	NA	NA	NA	NA
AWO49496.1\|54786_55551_-\|transposase	IS6 family transposase IS6100	A0A077SL39	Escherichia_phage	4.3e-86	65.7
AWO49497.1\|55579_55762_+	resolvase	NA	NA	NA	NA
AWO49498.1\|55777_56083_-	PadR family transcriptional regulator	NA	NA	NA	NA
AWO49499.1\|56093_57299_-	chromate transporter	NA	NA	NA	NA
AWO49500.1\|57454_57658_-	hypothetical protein	NA	NA	NA	NA
AWO49501.1\|57676_57856_+	hypothetical protein	NA	NA	NA	NA
AWO49502.1\|57785_58625_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AWO49503.1\|58618_58966_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AWO49504.1\|59129_59921_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
AWO49505.1\|59926_60217_-	DUF1010 domain-containing protein	NA	NA	NA	NA
AWO49506.1\|60328_60826_-	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
AWO49507.1\|60970_61984_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AWO49508.1\|61922_62537_+	DUF3330 domain-containing protein	NA	NA	NA	NA
AWO49509.1\|62662_63223_+	DNA resolvase	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
AWO49510.1\|65843_66704_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
AWO49511.1\|66886_67444_-	recombinase	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
AWO49512.1\|68007_69270_+\|transposase	IS1380 family transposase ISEc9	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
76805:77624	attR	NA	NA	NA	NA

DBSCAN-SWA_2

73101 : 104659

Escherichia_phage(50.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWO49515.1\|73101_73806_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AWO49661.1\|73949_74504_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
AWO49662.1\|74634_75465_+	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA
AWO49516.1\|76096_76801_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWO49663.1\|78422_78665_+	relaxase	NA	NA	NA	NA
AWO49517.1\|78696_79374_-	TetR family transcriptional regulator	NA	NA	NA	NA
AWO49518.1\|79452_80652_+	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
AWO49519.1\|80683_81568_-	EamA family transporter	NA	NA	NA	NA
AWO49664.1\|81705_82098_-	cysteine hydrolase	NA	NA	NA	NA
AWO49665.1\|82874_83399_-	DNA resolvase	A0A1S5Y2X8	uncultured_archaeal_virus	8.8e-14	34.4
AWO49520.1\|83428_84097_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.9e-130	99.5
AWO49521.1\|85400_86105_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AWO49522.1\|86960_87788_+	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.0e-21	37.6
AWO49523.1\|87784_88648_+	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
AWO49666.1\|88656_89484_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
AWO49524.1\|89492_90503_+	phosphonate dehydrogenase	A0A1V0SBV6	Catovirus	1.4e-15	25.1
AWO49525.1\|90496_91366_+	LysR family transcriptional regulator	NA	NA	NA	NA
AWO49668.1\|92071_92398_-	hypothetical protein	NA	NA	NA	NA
AWO49667.1\|92449_92536_+	ABC transporter	NA	NA	NA	NA
AWO49526.1\|92574_93555_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	2.6e-184	98.8
AWO49669.1\|95541_95823_+	DNA-binding protein	A0A1B1IUF9	uncultured_Mediterranean_phage	5.2e-05	38.2
AWO49527.1\|95857_96427_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
AWO49528.1\|96541_99337_+	heat shock survival AAA family ATPase ClpK	K4FB40	Cronobacter_phage	5.2e-129	41.0
AWO49529.1\|99336_99534_+	hypothetical protein	NA	NA	NA	NA
AWO49530.1\|99771_100521_+	diguanylate cyclase	NA	NA	NA	NA
AWO49531.1\|100507_101470_+\|protease	Zn-dependent protease	NA	NA	NA	NA
AWO49670.1\|103312_104659_-\|transposase	ISNCY family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP029590

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP029591

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection