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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP020653 Bordetella holmesii strain C690 chromosome, complete genome 0 crisprs cas3,DinG,DEDDh,csa3 0 0 18 0

Results visualization

1. CP020653
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 179305 : 227199 46 Ralstonia_virus(20.0%) transposase NA
DBSCAN-SWA_2 632490 : 677831 41 Ralstonia_virus(36.36%) tRNA,transposase NA
DBSCAN-SWA_3 799263 : 854175 53 Ralstonia_virus(16.67%) holin,transposase NA
DBSCAN-SWA_4 1095081 : 1193676 89 Leptospira_phage(20.0%) tRNA,protease,transposase NA
DBSCAN-SWA_5 1201703 : 1264117 53 Ralstonia_virus(28.57%) tRNA,protease,transposase NA
DBSCAN-SWA_6 1273464 : 1319838 47 Staphylococcus_phage(18.18%) holin,transposase,tRNA NA
DBSCAN-SWA_7 1587654 : 1646994 54 Ralstonia_virus(10.53%) transposase NA
DBSCAN-SWA_8 1671460 : 1718874 55 Leptospira_phage(30.0%) tRNA,transposase NA
DBSCAN-SWA_9 1725419 : 1782291 52 Escherichia_phage(20.0%) holin,transposase,integrase attL 1718808:1718867|attR 1768916:1768994
DBSCAN-SWA_10 1795055 : 1844067 46 Ralstonia_virus(33.33%) transposase NA
DBSCAN-SWA_11 1963333 : 2019737 48 Leptospira_phage(22.22%) transposase,integrase attL 1958017:1958032|attR 1987972:1987987
DBSCAN-SWA_12 2330602 : 2426939 89 Escherichia_phage(14.81%) tRNA,protease,transposase NA
DBSCAN-SWA_13 2472597 : 2534619 49 Rhodococcus_phage(20.0%) tRNA,protease,transposase NA
DBSCAN-SWA_14 2566177 : 2634134 59 Leptospira_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_15 2937001 : 3046788 94 Leptospira_phage(19.05%) tRNA,protease,transposase NA
DBSCAN-SWA_16 3096676 : 3152327 41 Ralstonia_virus(25.0%) tRNA,protease,transposase NA
DBSCAN-SWA_17 3351183 : 3417903 60 Synechococcus_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_18 3611653 : 3662753 42 Catovirus(18.18%) tRNA,holin,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage