CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP021464	Salmonella enterica subsp. enterica serovar Typhimurium strain UGA14 plasmid pUGA14_2, complete sequence	0 crisprs	cas14j	0	2
CP021465	Salmonella enterica subsp. enterica serovar Typhimurium strain UGA14 plasmid pUGA14_3, complete sequence	0 crisprs	NA	0	0
CP021466	Salmonella enterica subsp. enterica serovar Typhimurium strain UGA14 plasmid pUGA14_4, complete sequence	0 crisprs	NA	0	0
CP021462	Salmonella enterica subsp. enterica serovar Typhimurium strain UGA14 chromosome, complete genome	3 crisprs	WYL,DinG,cas3,DEDDh,cas14j,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,RT	26	10
CP021463	Salmonella enterica subsp. enterica serovar Typhimurium strain UGA14 plasmid pUGA14_1, complete sequence	0 crisprs	csa3,c2c9_V-U4	0	21

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

26832 : 51382

Salmonella_phage(42.86%)

integrase,transposase

attL 24824:24838|attR 43105:43119

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
24824:24838	attL	NA	NA	NA	NA
AWR41082.1\|26832_27015_+\|integrase	integrase	NA	NA	NA	NA
AWR41083.1\|27273_28251_-	protein RepA	J9Q7H0	Salmonella_phage	1.0e-100	62.6
AWR41084.1\|28756_29053_-	cytoplasmic protein	NA	NA	NA	NA
AWR41085.1\|29536_30058_-	hypothetical protein	NA	NA	NA	NA
AWR41086.1\|30733_30952_+	plasmid maintenance protein CcdA	NA	NA	NA	NA
AWR41087.1\|30953_31259_+	plasmid maintenance protein CcdB	NA	NA	NA	NA
AWR41088.1\|31260_31551_+	cytoplasmic protein	NA	NA	NA	NA
AWR41089.1\|31547_32069_+	cytoplasmic protein	NA	NA	NA	NA
AWR41090.1\|32103_32886_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	1.6e-51	91.1
AWR41091.1\|32894_33446_+	EAL domain-containing protein	NA	NA	NA	NA
AWR41183.1\|33458_33608_+	diguanylate phosphodiesterase	NA	NA	NA	NA
AWR41092.1\|33611_34121_+	CaiF/GrlA family transcriptional regulator	NA	NA	NA	NA
AWR41093.1\|34114_34600_+	hypothetical protein	NA	NA	NA	NA
AWR41094.1\|35319_35880_+	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA
AWR41095.1\|35946_36297_-\|transposase	transposase	A0A077SLN2	Escherichia_phage	1.9e-44	80.5
AWR41096.1\|37816_38542_-	MAPK phosphothreonine lyase	NA	NA	NA	NA
AWR41097.1\|38822_40598_-	mono(ADP-ribosyl)transferase SpvB	NA	NA	NA	NA
AWR41098.1\|40779_41547_-	virulence protein SpvA	NA	NA	NA	NA
AWR41099.1\|41720_41885_-	lysozyme	A0A0M4R365	Salmonella_phage	3.3e-12	63.0
AWR41100.1\|42058_42952_-	virulence genes transcriptional activator	NA	NA	NA	NA
AWR41101.1\|43560_44598_+\|transposase	IS630 family transposase	NA	NA	NA	NA
43105:43119	attR	NA	NA	NA	NA
AWR41102.1\|44786_45812_-	AAA family ATPase	NA	NA	NA	NA
AWR41103.1\|45744_47409_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AWR41184.1\|47392_47932_-	DNA invertase	E5FFF9	Burkholderia_phage	5.8e-21	33.9
AWR41104.1\|47956_48661_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWR41105.1\|48670_51382_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	74.3

DBSCAN-SWA_2

55659 : 82833

Escherichia_phage(35.29%)

integrase,transposase

attL 47894:47953|attR 69117:69937

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
47894:47953	attL	NA	NA	NA	NA
AWR41111.1\|55659_57183_+\|transposase	IS21 family transposase IS1326	A0A2L1IVA1	Escherichia_phage	1.2e-15	24.2
AWR41187.1\|57172_57955_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	2.5e-33	35.0
AWR41112.1\|58130_58631_-	N-acetyltransferase	NA	NA	NA	NA
AWR41113.1\|58649_58829_+	hypothetical protein	NA	NA	NA	NA
AWR41114.1\|58758_59598_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AWR41115.1\|59591_59939_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AWR41116.1\|60102_60894_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
AWR41117.1\|60986_61460_-	trimethoprim-resistant dihydrofolate reductase DfrA1	G3MBI7	Bacillus_virus	3.7e-19	32.1
AWR41118.1\|61616_62735_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.5e-71	45.7
AWR41119.1\|62706_63543_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
AWR41120.1\|63542_64346_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
AWR41121.1\|64406_65222_-	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	3.5e-09	27.6
AWR41188.1\|65529_66381_-	replication protein	NA	NA	NA	NA
AWR41122.1\|66432_67137_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWR41123.1\|67183_67585_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AWR41124.1\|67734_68595_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
AWR41189.1\|68777_69155_-	resolvase	Q1MVP4	Enterobacteria_phage	2.4e-53	100.0
AWR41125.1\|69179_69884_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWR41126.1\|70194_70935_-	carbonic anhydrase	NA	NA	NA	NA
69117:69937	attR	NA	NA	NA	NA
AWR41127.1\|71589_72078_-	cytoplasmic protein	NA	NA	NA	NA
AWR41128.1\|72336_73452_+	hypothetical protein	NA	NA	NA	NA
AWR41190.1\|73537_73954_+	hypothetical protein	O64348	Escherichia_phage	8.2e-07	42.9
AWR41129.1\|74137_74473_+	hypothetical protein	NA	NA	NA	NA
AWR41130.1\|75127_76069_-\|transposase	ISNCY family transposase	Q2A0A7	Sodalis_phage	2.0e-72	54.3
AWR41131.1\|76483_77689_+	ParA family protein	A0A077SL49	Escherichia_phage	1.5e-162	69.3
AWR41132.1\|77685_78663_+	chromosome partitioning protein ParB	A0A1B0V750	Salmonella_phage	5.2e-84	53.2
AWR41133.1\|78744_80019_-	DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	3.0e-156	64.5
AWR41134.1\|80018_80441_-	protein SamA	A0A1W6JNS2	Morganella_phage	1.0e-28	51.6
AWR41135.1\|80951_81422_+	hypothetical protein	NA	NA	NA	NA
AWR41136.1\|81414_81771_+	hypothetical protein	NA	NA	NA	NA
AWR41137.1\|82152_82833_+	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-28	36.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP021462

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CRISPR-Cas detection and classification

Crispr_ID: CP021462_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP021462_1

2875683-2875792

Orphan

Consensus_repeat	Method
TTAAAAAAAGGTGGTACAGGGTGGGACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP021462_1

>merge|CP021462|1|2875683-2875792|CRISPRCasFinder
TTAAAAAAAGGTGGTACAGGGTGGGACAAGTGGTACACGCAGAGCTGGCGAGGGTTACAGCGTCCCACCTTAGAGAATTTGATTAAAAAAAAGTGGTACAGGGTGGGACA

>CP021462|1|1|2875683-2875792|CRISPRCasFinder
TTAAAAAAAGGTGGTACAGGGTGGGACA	AGTGGTACACGCAGAGCTGGCGAGGGTTACAGCGTCCCACCTTAGAGAATTTGA
TTAAAAAAAAGTGGTACAGGGTGGGACA

Protein	Signature genes	Signature genes Name	Protein_function
CP021462.1\|AWR38690.1\|2879833_2880208_+\|PTS-sorbitol-transporter	unknown	unknown	gnl\|CDD\|226254
CP021462.1\|AWR38682.1\|2870538_2871732_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376935
CP021462.1\|AWR40624.1\|2869555_2870149_+\|hypothetical-protein	unknown	unknown	unknown
CP021462.1\|AWR38689.1\|2879315_2879837_+\|PTS-sorbitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226253
CP021462.1\|AWR38684.1\|2873344_2873560_+\|transcriptional-regulator,-AlpA-family-protein	unknown	unknown	gnl\|CDD\|225848
CP021462.1\|AWR40625.1\|2877495_2878314_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373095
CP021462.1\|AWR38679.1\|2851366_2862841_+\|Ig-like-domain-repeat-protein	unknown	unknown	gnl\|CDD\|375438
CP021462.1\|AWR38692.1\|2881195_2882209_+\|gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
CP021462.1\|AWR38687.1\|2878467_2878824_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
CP021462.1\|AWR38683.1\|2872066_2872894_-\|hypothetical-protein	unknown	unknown	unknown
CP021462.1\|AWR38691.1\|2880204_2881185_+\|PTS-sorbitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|226255
CP021462.1\|AWR38680.1\|2862905_2864315_+\|type-I-secretion-protein-TolC	unknown	unknown	gnl\|CDD\|273829
CP021462.1\|AWR38693.1\|2882503_2883706_+\|hexulose-6-phosphate-synthase	unknown	unknown	gnl\|CDD\|379021
CP021462.1\|AWR38685.1\|2873595_2875665_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227806
CP021462.1\|AWR40623.1\|2866499_2867663_+\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
CP021462.1\|AWR38688.1\|2878918_2879203_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225957
CP021462.1\|AWR38694.1\|2883779_2884415_-\|3-hexulose-6-phosphate-synthase	unknown	unknown	gnl\|CDD\|132172
CP021462.1\|AWR38681.1\|2864311_2866492_+\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|274550
CP021462.1\|AWR40622.1\|2850270_2850753_+\|SsrA-binding-protein	unknown	unknown	gnl\|CDD\|235455
CP021462.1\|AWR38686.1\|2876167_2877451_+\|ATPase	unknown	unknown	gnl\|CDD\|226459

Protein	Function_ID	Function_description	E-value
CP021462.1\|AWR38690.1\|2879833_2880208_+\|PTS-sorbitol-transporter	gnl\|CDD\|226254	COG3731, SrlB, Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism].	5.89598e-59
CP021462.1\|AWR38682.1\|2870538_2871732_+\|hypothetical-protein	gnl\|CDD\|376935	pfam02810, SEC-C, SEC-C motif. The SEC-C motif found in the C-terminus of the SecA protein, in the middle of some SWI2 ATPases and also solo in several proteins. The motif is predicted to chelate zinc with the CXC and C[HC] pairs that constitute the most conserved feature of the motif. It is predicted to be a potential nucleic acid binding domain.	3.20348e-07
CP021462.1\|AWR38685.1\|2873595_2875665_+\|hypothetical-protein	gnl\|CDD\|227806	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair].	0
CP021462.1\|AWR38689.1\|2879315_2879837_+\|PTS-sorbitol-transporter-subunit-IIC	gnl\|CDD\|226253	COG3730, SrlA, Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism].	2.29561e-79
CP021462.1\|AWR38684.1\|2873344_2873560_+\|transcriptional-regulator,-AlpA-family-protein	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	2.37497e-21
CP021462.1\|AWR40625.1\|2877495_2878314_+\|hypothetical-protein	gnl\|CDD\|373095	pfam14491, DUF4435, Protein of unknown function (DUF4435). This presumed domain is functionally uncharacterized. This domain is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 285 and 362 amino acids in length. This domain is sometimes associated with AAA domains.	2.33424e-50
CP021462.1\|AWR38679.1\|2851366_2862841_+\|Ig-like-domain-repeat-protein	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	1.1841e-22
CP021462.1\|AWR38692.1\|2881195_2882209_+\|gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	9.77409e-67
CP021462.1\|AWR38681.1\|2864311_2866492_+\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|274550	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
CP021462.1\|AWR38691.1\|2880204_2881185_+\|PTS-sorbitol-transporter-subunit-IIB	gnl\|CDD\|226255	COG3732, SrlE, Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism].	1.31232e-179
CP021462.1\|AWR38680.1\|2862905_2864315_+\|type-I-secretion-protein-TolC	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	5.87074e-128
CP021462.1\|AWR38693.1\|2882503_2883706_+\|hexulose-6-phosphate-synthase	gnl\|CDD\|379021	pfam13020, DUF3883, Domain of unknown function (DUF3883). This is a domain is uncharacterized. It is found on restriction endonucleases.	8.46376e-16
CP021462.1\|AWR40623.1\|2866499_2867663_+\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	3.18004e-97
CP021462.1\|AWR38688.1\|2878918_2879203_+\|transcriptional-regulator	gnl\|CDD\|225957	COG3423, Nlp, Predicted transcriptional regulator [Transcription].	5.31271e-38
CP021462.1\|AWR38694.1\|2883779_2884415_-\|3-hexulose-6-phosphate-synthase	gnl\|CDD\|132172	TIGR03128, RuMP_HxlA, 3-hexulose-6-phosphate synthase. Members of this protein family are 3-hexulose-6-phosphate synthase (HPS), or the HPS domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.	4.14833e-98
CP021462.1\|AWR38687.1\|2878467_2878824_-\|transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.55924e-09
CP021462.1\|AWR40622.1\|2850270_2850753_+\|SsrA-binding-protein	gnl\|CDD\|235455	PRK05422, smpB, SsrA-binding protein SmpB.	1.11352e-88
CP021462.1\|AWR38686.1\|2876167_2877451_+\|ATPase	gnl\|CDD\|226459	COG3950, COG3950, Predicted ATP-binding protein involved in virulence [General function prediction only].	0

>CP021462.1|AWR38685.1|2873595_2875665_+|hypothetical-protein
MKRAPFLCKQSPDRTLEVVILAGSLAWETSRVWRKDPDREDDVPPMVLGPNELADLSNLTIIRPDTLYVRVLRTGDISEEDLLKIAVKLAHAGVQMARLMSPDGELLENWTGQLERLRQERPSDILPDHFRLDEEALWFDKLTERRDGESDVQPQRICSPLRVTAITCDSHDGSYGRLLEWHTTTGQLRRWAMPMAMLSGNGEELRRILLENGLTNISTRPALRSLLCEYISRSLPGRRVTCVEKTGWHNGVYVLPDEVIGPDGDNVILQGSHYLTGGFAQAGTLAEWQEQVAALCAGNSRLVFAVCCALAAPLLRLTGTGGGGFHLRGESTDGKTTVMKVAASVCGGTDYWHSWRATGNALEGIASRHNDALLPLDELREVDPREAGMIAYMLANGQGKGRARTDGEVRNRRHWTLLLFSTGELSLAEHTERAGERIYAGMDVRMVQIPSDTGQHGAFEQLHGFASGQQFADTLCDRVARFHGTAFRAWLAFLTHDQDASTTLARELLRRYQNALMPDNAGNQVQRIVARFALLAAAGEIATLHGITGWQKGTAYEAVQICLHAWLNERGHIANQEDEGVLAQIKRFITAHQYSRFASWDGPDRPLNMAGFRRVEKDPLTGEEHTLFFILPEGWREICRGFSPARAARLCQEAECLQPGSDGKYQSQVRLPEIGKTRVYRLTSRILSI
>CP021462.1|AWR38684.1|2873344_2873560_+|transcriptional-regulator,-AlpA-family-protein
MKIRADSNDAFPESGNVRMRQVVQFLAMSESSVYRLIKDTDFPRPVHLSSRLVVFDAAEIRQWQQRRTVIR
>CP021462.1|AWR38683.1|2872066_2872894_-|hypothetical-protein
MQGLTMDDISLSIARNMFHLQVYESDGVRFEDLFSKIMYYKSPDFQQVKPYGNIGDRKNDGFIKGQGVYYQVYAPEDASNNVLAAVNKIKDDFEGLRDYWHDICPIKKYYFVLNDKYKGSLPQLHKELIVLQSDFNLIDTGVIVAKDLERELFNLPDDMIRSVVGHLPDIDHEEYMFVSGFTCFISAWINFEKIARHKVFSAKQPNRPLFIGKVVNALVKNKIISRQDATFIKKITEVRNSLVHGVSMLVPKKNEIDMLIFITEKIKPAGVCRLD
>CP021462.1|AWR38682.1|2870538_2871732_+|hypothetical-protein
MVNYPYFSVNVLSGSINFVENDKVKLGRNDKCWCKSGLKYKKCHLDRDREMPVSKAEALKFSKSNSQRKACYAPASMHEDCDKRIVQAHTLSKSSSLKAIADSSNHVMGVVMNLPSLIKNNGRWVPEKIGINQASTFTGFCAVHDRILFSCLENEKFTGTDEQCFALMFRSLSKEIYAKEGGRRSSDFAKNADKGKLQAEQVYIQEFVSLHQSGLNAAITELNNLKTSLDRILLNRQFSEIESVVFTFSEPLPIAVSSILSPERDFDGTKIQDLNDLTVSAEQVCFNAFSSEGKGYVVFSWLGTSAIIRRFVRSLIKVQTDRIFNTLLYFFFTKAENTYSSPEWWDSLSDKQRENIGNMIMSGVDFFDNSTLRVDHSVDYNSAALAEIRYSNSEISS
>CP021462.1|AWR40624.1|2869555_2870149_+|hypothetical-protein
MPLLEARHLALLLLGLDASQPANALPEEHQENYRILHDAISRTIKATGMVSAPANKRMFYADEMFALAWRLIDDELTPSEVKDRSLKAVMKLSRNSRGRKWLKTLGDDALPDLTASTQPSLRGMHKRDKARENTARLCWLLVQLLVEETDGRYGTSDKPASDQILRKLKTLAKEQELPSDGLGRGTFYEVLKMEREK
>CP021462.1|AWR40623.1|2866499_2867663_+|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MDDPDIQRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLASSARLTAEVNDLPLAFPAELNGWPDLIAAETRLYKSRRAQLADTEAELRDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVETISPDTIQDKVKPEIFYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDYLIKPFNRAKEALRER
>CP021462.1|AWR38681.1|2864311_2866492_+|type-I-secretion-system-permease/ATPase
MTRAAPDVEEVLSERALSQWAQAISYVAGHYRVACSPGSIQANAPWLRGKSRTTALTQLARQAGLSFHAPDIDKTAFSQWRLPLVVELRDGQLLVIEHVNGEEAVDVFVIEEEGQRNRLTLSELLPEILYVAALRPLSALKDSRVDRYISRFKPDWMRELVLQDIRPYLPVMVAAFLINVLSLAGIVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLFGFLLREARTHIMDVLGKRADMRISDRVFGHALRLRNSAIPRSTGSFISQLRELEQIREMITSSTLATIVDLPFFFLFMIVLAIIAPPLAWIAPVAALLMILPGVALQKKLAVLANQAAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITGESGLRTRKLTQGLISWGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVVAASMLGSRMIAPMANLCGVLARWQQVKAAKMGLDNIMQLPTETQHDDSLIHRDILHGHYLFENAQFRYHNDDQRIPLRLVRLEIMPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDARLDNLSLSHIDMADLRRNIGFLSQNARLFFGTLRENLTLGAPHANDEQIFDALEVSGGAVFVRRLAKGLDHPIMEGGNGLSGGQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQRLHQWLGNRTLVVATHRVPILELVERVVVLKEGQLVMDAPKAQALNADRMQSHRREWKNENQSA
>CP021462.1|AWR38680.1|2862905_2864315_+|type-I-secretion-protein-TolC
MGRVAPVAIVLAFALFHHQPRGAEAPPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNLTLNDAVNRAVNWHPSIREAIGKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTVAHETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLDSAKASLMSWLGWNSLNGINNDFPAKLARSCETATPDDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHEVLDKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTRELYQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNCLYNTGALRQAFALNHRSIQSVEIQP
>CP021462.1|AWR38679.1|2851366_2862841_+|Ig-like-domain-repeat-protein
MRLLAVVSKLTGVSTTVESSAVTLNAPSIVKLSVAREEISQLTRINQDLVVRLHSGETITIKNFYVTNDLGASQLVLAENDGTLWWVENPQAGLHFEQIADINELLVTSGASHEAGGAVWPWVLAGAVAAGGIAAIASSGGGDSHHHSDGDNPPPDNTNPDGNPPDNSNPGGSTPNGNTPGSSNPVDTTPPLAPGELLISADGKTVSGQAEAGSTITIKDPSGNVVGEGKADSDGKFSIDLTAPQISGEQLTVTATDDAGNTGPSATIDAPNIPLPDTPVITAAIDDAAPLTGTLSNNQFTNDNTPTLEGTGSAGTVIHIYANGQEIGSTTVDTSGNWHFAITSALADGENHFTAIATNVKGESSESARFTLTIDTLIPDAPRVELIADNTSLLTGPLQNNDRTDEAKPLFSGQGDAGNTITIKEGSTVIGSATVDENGRWTFTPTTPLSDGEHTFTVEQSDKAGNTSRVTTTPTIIVDTTPPDAAIIDNVAKDGTTVSGTAEAGSTVSIYDPAGNYLGSTITGENNHFSITLNPAQTHGERLEARIQDAVGNIGPATEFTASDSQYPAQPTILTVTDDAGAVTGLLKNGDATDDNRPPLSGTAEPGSTISINDNGFPVATFPPIVADADGKWSFTPSLALADGDHVFTATATNDRGTSGQSVSFTIDIDTQPPVLEGLAVSDVGDRLTGTTEAGSTVVIKDSLGNTLGSGTAGDDGTFSIGISPAKINGETLSISVTDKAANSGPVETLNAPDKTAPAAPDGLTVATDGLSVSGQAEAGATVTIRDSSNTVLGSAVANGNGQFIVPLNTAQTNGQALIATATDVAKNESAAATVIAPDSTAPEMPKNVVISEDGTSISGTAEPGSAITIATPDGKPLGSGKADGEGHFTLPLVPAQTNGEQVTVTATDSANNVSPPTTAQAPDITAPDKPIITQVLDDVESFTGPLVNGQTTNDNRPTLSGTAEAGARVEVFDNGFSLGLATLQPNGAWTFTPSQNLGEGAHRLTVIATDAKGNASQAASFDLVVDTQSPQQPVITFITDDAPGILGSVAHLGLTNDSTPTINGTGEPGSTVHLYQNGARIADIIVGNSGVWSYAYTTASPLADDTYTFTVTASDSNGNTTPFSTDFTITIDTQAPAAPGVIGVADGDGNTIDTNQITQESQPRLSGSGTAGDTIILYDNGNAIGQALVGTDGRWQFTPPAALGDGDHLLTARANDPAGNESPESISFTLRIDTQAPDAPQIVSAAITGGEGEVLLANGSITNQRMPTLSGTGEPGTIITLYNNGVELATVQVNPQGSWTYPLTRNLSEGLNILTATATDAAGNSSPTSGVFSVTLDTQPPAQPDAPLISDNVAPVIGNIGNNGATNDTTPTFSGTGEIGSTIILYNNGSEIGRTTVGDNGSWNFTPAALTPETYTITVTETDRAGNISPPSASVTFTLDTTAPANPVITFAEDNVGEVQDTIVSGATTDDNTPVIHGTGDIGSIITLYNGSSVLGVVTVDETGTWTLPVTSALPDGVYTLTAIAADAAGNSSGVSNSFTFTVDTVPLQPPVVNEILDDVAPVTGPLTDGAFTNDRTLTINGSGENGSTVTIYDNGVAIGTALVTDGVWTFNTPELSEASHALTFSATDDAGNTTAQTQPITITVDITAPPAPTVQTVDDDGTRVAGIADPYATVEIHHIDGTLVGSAVANGTGEFVVTLSPAQTDGGTLTAIAIDRAGNNGPATNFPASDSGLPAVPAITAIEDDVGSVQGNIAAGGATDDTTPTLRGTTDIGSTVEVFIDGDSAGFATVDASGNWIFEIATPLSESTHYFTVQATNANGPGGLSAPVGITVDLSAPAQPVITSATDDVPGMTGTLDNGALTNDSRPTLNGTGEAGATIRILDNGVEIGSATVDQSGNWRFTPNAPLESNAHIFTAVATDPAGNSGQPSDGFTLNIDAQAPDVPVITSVIDDNNQPTVPVLPGQSTDDRQPILNGTGEPGATITIFDNGTPLGTAQVGENGSWTFPVPRNLSEGSHNLTVSATDPAGNTSAVSAPWTIVVDITPPAIPVLTSVVDDQPGITGNLVSGQLTNDATPTLNGRGEAGATINVYLDGNPASIGTTTVNSDGTWSFTPQTPLANGSHTFTLSATDPAGNSSAVSSGFVLTIDATPPAAPVIASVADNTAPVTGIVPNGGSTNETRPTLSGTGEAGTTISIYNGSALVGTAQVQANGSWSFTPSTSLGAGVWNLTATATDAAGNTSAASEIRSFTIDTTAPAAPVIDTVYDGTGPITGNLSSGQITDEARPVISGTRETNTTIRLYDNGTLLAEIPADNSSSWRYTPDASLATGNHVITVIAVDAAGNASPVSDSVNFVVDTTPPLTPVITSVSDDQAPGLGTIANGQNTNDPTPTFSGTAEAGATITLYENGTVIGTTTAQPDGAWSVSTSTLASGTHVITAVATDAAGNSSPNSTAFTLTVDTTAPQTPILTSVVDDVAGGVTGNLANGQITNDNRPTLNGTAEAGSVVSIYDGDTLLGVTSANASGAWSFTPTTGLNDGTRTLTVTATDPAGNVSPATSGFTIVVDTLAPTVPLITSIVDDVPNNTGAIGNGQSTNDTQPTLNGTAEANSAVSIFDNGALVATVNANASGNWSWTPTAALGQGSHAYSVSAADAAGNVSAASPSITIIVDTIAPGAPGNLVINATGNRVTGTAEAGSTVTITSETGVVLGTATADGTGSFTATLTPAQTNGQPLLAFAQDKAGNTGIAAGFTAPDTRVPEAPIITNVVDDVGIYTGAIANGQVTNDAQPTLNGTAQAGATVSIYNNGALLGTTTANASGNWSFTPTGNLTEGSHAFTATATNANGTGSVSTAATVIVDTLAPGTPSGTLSADGGSLSGLAEANSTVTVTLTGGVTLTTTAGSNGAWSLTLPTKQIEGQLINVTATDAAGNASGTLGITAPVLPLAARDNITSLDLTSTAVTSTQNYSDYGLLLVGALGNVASVLGNDTAQVEFTIAEGGTGDVTIDAAATGIVLSLLSTQEIVVQRYDTSLGAWTTIVNTALGDFANLLTLTGSGVTLNLSGLGEGQYRVLTYNTSLLATGSYTSLDVDVHQTSAGIISGPTISTGNVMADDTAPTGTTVTAITNANGVSTPVGAGGVDILGQYGTLHINQDGSYTYTLTKPTAGYGHKESFTYTITQNGVGSSAAQLVINLGPAPVPGSVIATDNNASLVFDTHVSYVNNGPSTQSGVTVLSVGLGNVLNANLLDDMTNPIIFNVEEGATRTMTLQGTVGGVSLVSTFDLYVYRFNDAIQQYEQFRVQKGWINTLLLAGQSQPLTLTLPGGEYLFVLNTASGISVLTGYTLAISQDHTYAVDSITANTTGNVLTNDVVPTDALLTEVNGVAIAATGTTEVNGLYGSLIIDARGNYTYTLKNGVGADSIKTPDSFIYTVKAPNGDTDTASLNITPTARALDAINDVSDTLSVATLQDTAAWLDSSVGSASWGLLGKSGSGSGTFDVATGTVLKGASLVFDVSTLITLGNLNISWAIQENGTVIRNGTVPVANITLGSATVTVNLSGLELDAGTYTLNFTGTNTLAGAATITPRVIGTTVDLDNFETSGTHTVLGNIFDGSDAAGAMDQLNTVNTRLSISGYNGSAATLDAAANTTSATIQGHYGTLQINLDGAYTYTLNNGVAMSSITSKEVFTYQLDDKMGHTDSATLTIDMAPQIVSTNQNDVLIGSAYGDTLIYHLLNGADATGGNGVDRWQNFSTAQGDKIDIHELLTGWDHQAATLGNFVQVHTSGANTVISVDRDGTGSAFKSTDLVTLENVQLTLNDLLQNNHLITSG
>CP021462.1|AWR40622.1|2850270_2850753_+|SsrA-binding-protein
MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAWLFGANFTPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDLKEREWQLDKARIMKNAGR
>CP021462.1|AWR38686.1|2876167_2877451_+|ATPase
MELRRISVNNLFGILNYDIDLGNSETIIITGPNGYGKTMLLKIIDNILNKNIDFFFDLRFEEIKFELDTILLCIEKQKNKNVAVTVVDYVNDKKRQEVFTLNKNKELDVDYFDEIYNKLLICDNIDSDPILKSYNHEEILNYYKIKKIKLHKEKHHKSDFLDKSIPNAELTFIKAQRIENIKNEKSAIESQANFLLELIKRAAEESAQISQRLDSTFPARLFDSINENISSTSINDRLIGIQRKRELFMKFGIIKSEDTFIPRKFSNATLGKEYSTVLNLYISDALEKLSPYEELFEKINLFVNLLNEKMLAFKEIKISNEHGFYFQSDNGERISLSNLSSGEQNQIVIYFDLIFKAKQNSVILIDEPEISLHVAWQKEFLDSIARIQKLNEFSKIIIATHSPQIVNNNWDITYDLFENNNKNMEGQ
>CP021462.1|AWR40625.1|2877495_2878314_+|hypothetical-protein
MLLLFRSPKYSRKIFFTLEGESDIRFLNTHFADERIHYDSPCSGKPEVINAVQLLRSHGKQNVYGLCDADFDILEGNSYENIHFTDCHDLEMMLIEGGSFDKFISEFLKTSILRIHTLEDIRNNLKESIIDVTYKIGILKWLNFKNNLLLMFKGMKYDNFITFVDFSANIDIDNYIQHILDRSPRKPPHCDFNFLKKEYQLLYNKQADYKYVCNGHDFTYITMMAFHSEFSRDKNITQEKVESHLRIAYSATAFQRTNIYNELSGLIDSHNI
>CP021462.1|AWR38687.1|2878467_2878824_-|transcriptional-regulator
MPEDGCCPERDNSCMFRCRIAIVIGKRLKISRVRADLTQAELGALAGLDEESASARISSYEKEVHAPDFKLVCKLAAALDVPEAYFYAVDDELAELILQYHRFKKNNPGSTLILSGNI
>CP021462.1|AWR38688.1|2878918_2879203_+|transcriptional-regulator
MKKSTTKDWHPADIVAALHKRGTSLAKLSREAGLASSTLSNTLTRPWPKGEWLIAIALDMHPSEIWPGRYLNSSNKREPRKPLHPMTTTDNSGT
>CP021462.1|AWR38689.1|2879315_2879837_+|PTS-sorbitol-transporter-subunit-IIC
MFLVSLAEGFIHLFQAAGKIFLDMMTGLIPMLICLLLAINFLMKLVGTVRMEKVAALLGRSRILTYGVLPVLGWFFMSSPGALTLGKLLPEKSKPGYEDALGTTAHPLTSLFPHVVPSELFVWLGVAAGVKALGLPVTSLALRYIAAAMLIGLIRGIITEYLFLRLSRRGNAP
>CP021462.1|AWR38690.1|2879833_2880208_+|PTS-sorbitol-transporter
MMIYCARITAIGLFVADGLTDKMLITFDSNGPKDCLDYSLSLEPSFREESLMILPGDRLLLAGHDYLVTAVGKGVQQALFELGHLTLVFDGDLKPCHTGAIHLSGPVPKLHDLHGNLVIEEGRP
>CP021462.1|AWR38691.1|2880204_2881185_+|PTS-sorbitol-transporter-subunit-IIB
MNTVLIPPGPGGYGKGLWLPVASGKKVLSLTGREIHPVAIEIGALTESEVVNGFSDIPPDNDILCVVINCAGSLRCGLYPQKGIPTINVLPTWRAGPLAQFISEDNYVSGVTIEQLVLVDTAEAPDGEPEPVSVTAPRIITTPPPARGAEKLVRMVERTGTAVGHVIALLFAASREAVDVSLRNVIPFMAFVSLLIALVQETALGSLIAHALTPLANSLWGLVLLSLICGIPFLSPVLGPGAAISQVIGVMIGTQIGAGAISPAFALPALFAINVQVGCDFVPVGLSMQEAKPETIAKGVPAFLLSRQLTGPLAVIIGWLFSLGLF
>CP021462.1|AWR38692.1|2881195_2882209_+|gfo/Idh/MocA-family-oxidoreductase
MNKIRAAVVGAGIYGKHHMNAYRHNPDTVLVAICDTDTERCDDLAMAYGIQGYTRLDRLLQQEAIDIVSVATPDPYHTESILTALRHGQHVLAEKPLATSVRECELIVEMAQQRDLLVGVDFHKRWDPAVMRIKAELENPETGCILRGHISMDDVITVPTQWLNWAGASSPVWFLGSHCFDLVRHLSGQEVVSVYAVGQKRLMVECGLDTFDSVQSLLTMADGSSWGVENSWVLPEGFPKDNDGRIDILCEATYIRSTSQHRGLEITTPALTLTPNSYFINYRNGVASGFGIDPINDFVRAVRHKAPYPVTAEDGLAVSRICEAVHRSLESGKPEDV
>CP021462.1|AWR38693.1|2882503_2883706_+|hexulose-6-phosphate-synthase
MLEFHNVPLKTILRRAIMSLPTNFNDILRFFEKDYDTAKEDNALSARGQFLQLYPLNHLKKMTLDDYVIGKGTASFCACVEVKTRTWANMQGATALKFGIYYGKSKSDPTVRYRFTQKFGDDDSTNKEVFANVKDALLDLIQSGKELDFRAIDENPLSQMFKAKILSLYFPEHFINICSKDHLKEIAMEMGIKEQQFISKYQHLLFKKKLEHKITRNWSNPKYMSFLYAQFIRKDLSSAPAVIVKKPQKRNHPEVNFEEITDNRDLIGKKSEEYALNWEKNRLIGLGYSKLAEEIDDRRNRPTYGYDFLSFNAPGDERYIEVKSIGRDGKEGAFRFFLSENELTVSNLSNHSKNYYFYLVQYGKDGEPCNLYVKHAQDLYTNSEMSPCAYVVRFDLEEPA
>CP021462.1|AWR38694.1|2883779_2884415_-|3-hexulose-6-phosphate-synthase
MKLQLALDELTLPEAMVFMDKVVDDVDIIEVGTPFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGISSQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLLQHH

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Crispr_ID: CP021462_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP021462_2

3066728-3068142

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder

22 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of CP021462_2

>merge|CP021462|2|3066728-3068142|CRISPRCasFinder,CRT,PILER-CR,CRT,CRISPRCasFinder
GTGTTTATCCCCGCTGGCGCGGGGAACATTTTTCAGCCCTTGTCGACTGCGGAACGCCCCTCGGTTTATCCCCGCTGGCGCGGGGAACACGCGAAATAGTGGGGAAAAACCCCTGGTTAACCCGGTTTATCCCCGCTGGCGCGGGAAACACTAGGCCTTGATACCATCGCTCGCACCTCGTCACGGTTTATCCCCGCTGGCGCGGGGAACACGTTTATTACTGCTTAGTTAATTAATGGGTTGCCGGTTTATCCCCGCTGGCGCGGGGAACACAGGCGAATAATCTCTAATAGTCTCAATTCGTTCGGTTTATCCCCGCTGGCGCGGGGAACACTAAATCTGGCGTCGAGACATTCGAAATAGTGCCGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTTGATTTTGCTGCGATGTTATAACCAGACGGTTTATCCCCGCTGGCGCGGGGAACACAATCACTGCGGGGGTATTTAGCGGAAACGGCTCGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAATTAAAGCCGAGGGTGGTACCGCGCCTTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGCACCTCGAAACGGTTTTAAAACACTACCGTTTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGACCGATGGGGCCAACATCGCCGAACGTGGCGGTTTATCCCCGCTGGCGCGGGGAACACGTTACGTTCGGTAAATGGAAAGCGGCGAATATCGGTTTATCCCCGCTGGCGCGGGGAACACCCAGAAAGTGCCGGTAGTGCCTGATGAACGACCGGTTTATCCCCGCTGGCGCGGGGAACACCGCGCCCACTTCCGTAAAATACAGATAATCCACGGTTTATCCCCGCTGGCGCGGGGAACACGGCAGCGGGCGAGGCAAACACATTCGGGGCGTCGGTTTATCCCCGCTGGCGCGGGGAACACGGTAATTTCTCATCTAACAGCCTGTACGCCTCAGGTTTATCCCCGCTGGCGCGGGGAACACGAATCTAATGCAACAGATGAATAAACACGTAACGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTATCGTCAATGCGAAATTTTCCGCGACGCGGTTTATCCCCGCTGGCGCGGGGAACACTCCCATTCACCAACAACAATATCGCCCTGCAACGGTTTATCCCCGCTGGCGCGGGGAACACACTTCCTTCAGTCTTAACGATAATCCGCAACGCGGTTTATCCCCGCTGGCGCGGGGAACACGCAAAATAGCGATGAGCTGGCTACGCCCACTGGCGGTTTATCCCCGCTGGCGCGGGGAACACCAGCACGAAAAATTATTTACTGTCGTTGCTCACGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP021462|2|2|3066728-3067245|CRISPRCasFinder
GTGTTTATCCCCGCTGGCGCGGGGAACAT	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAATCTGGCGTCGAGACATTCGAAATAGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAATTAAAGCCGAGGGTGGTACCGCGCCTTATTCGGTTTATCCCCGCTGGCGCGGGGAACAC	GCACCTCGAAACGGTTTTAAAACACTACCGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGACCGATGGGGCCAACATCGCCGAACGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTTCCTTCAGTCTTAACGATAATCCGCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAAATAGCGATGAGCTGGCTACGCCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCACGAAAAATTATTTACTGTCGTTGCTCA


>CP021462|2|1|3066728-3067244|CRT
GTGTTTATCCCCGCTGGCGCGGGGAACAT	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAATCTGGCGTCGAGACATTCGAAATAGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACAC	AATTAAAGCCGAGGGTGGTACCGCGCCTTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCACCTCGAAACGGTTTTAAAACACTACCGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGACCGATGGGGCCAACATCGCCGAACGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTTCCTTCAGTCTTAACGATAATCCGCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAAATAGCGATGAGCTGGCTACGCCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCACGAAAAATTATTTACTGTCGTTGCTCA


>CP021462|2|1|3066789-3068142|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAATCTGGCGTCGAGACATTCGAAATAGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATCGAGTAACGTGCGCTGGAACGCGTC
GGCGCGGGGAACACAATTAAAGCCGAGGG	TGGTACCGCGCCTTATTCGGTTTATCCCCGCT
GGCGCGGGGAACACGCACCTCGAAACGGT	TTTAAAACACTACCGTTTCGGTTTATCCCCGCT
GGCGCGGGGAACACTGGACCGATGGGGCC	AACATCGCCGAACGTGGCGGTTTATCCCCGCT
GGCGCGGGGAACACGTTACGTTCGGTAAA	TGGAAAGCGGCGAATATCGGTTTATCCCCGCT
GGCGCGGGGAACACCCAGAAAGTGCCGGT	AGTGCCTGATGAACGACCGGTTTATCCCCGCT
GGCGCGGGGAACACCGCGCCCACTTCCGT	AAAATACAGATAATCCACGGTTTATCCCCGCT
GGCGCGGGGAACACGGCAGCGGGCGAGGC	AAACACATTCGGGGCGTCGGTTTATCCCCGCT
GGCGCGGGGAACACGGTAATTTCTCATCT	AACAGCCTGTACGCCTCAGGTTTATCCCCGCT
GGCGCGGGGAACACGAATCTAATGCAACA	GATGAATAAACACGTAACGGTTTATCCCCGCT
GGCGCGGGGAACACTCTTTATCGTCAATG	CGAAATTTTCCGCGACGCGGTTTATCCCCGCT
GGCGCGGGGAACACTCCCATTCACCAACA	ACAATATCGCCCTGCAACGGTTTATCCCCGCT
GGCGCGGGGAACACACTTCCTTCAGTCTT	AACGATAATCCGCAACGCGGTTTATCCCCGCT
GGCGCGGGGAACACGCAAAATAGCGATGA	GCTGGCTACGCCCACTGGCGGTTTATCCCCGCT
GGCGCGGGGAACACCAGCACGAAAAATTA	TTTACTGTCGTTGCTCACGGTTTATCCCCGCT
GGCGCGGGGAACAC

>CP021462|2|2|3067258-3068142|CRT
	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAATCTGGCGTCGAGACATTCGAAATAGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACAC	AATTAAAGCCGAGGGTGGTACCGCGCCTTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCACCTCGAAACGGTTTTAAAACACTACCGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGACCGATGGGGCCAACATCGCCGAACGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTTCCTTCAGTCTTAACGATAATCCGCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAAATAGCGATGAGCTGGCTACGCCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCACGAAAAATTATTTACTGTCGTTGCTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP021462|2|3|3067319-3068142|CRISPRCasFinder
	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAATCTGGCGTCGAGACATTCGAAATAGTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAATTAAAGCCGAGGGTGGTACCGCGCCTTATTCGGTTTATCCCCGCTGGCGCGGGGAACAC	GCACCTCGAAACGGTTTTAAAACACTACCGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGACCGATGGGGCCAACATCGCCGAACGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTTCCTTCAGTCTTAACGATAATCCGCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAAATAGCGATGAGCTGGCTACGCCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCACGAAAAATTATTTACTGTCGTTGCTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
CP021462.1\|AWR38874.1\|3064507_3065416_-\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP021462.1\|AWR38866.1\|3057975_3058602_-\|protein-L-isoaspartate-O-methyltransferase	unknown	unknown	gnl\|CDD\|178974
CP021462.1\|AWR38871.1\|3061591_3061903_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP021462.1\|AWR38878.1\|3069448_3070099_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
CP021462.1\|AWR38870.1\|3060862_3061573_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP021462.1\|AWR38884.1\|3076802_3077027_+\|hypothetical-protein	unknown	unknown	unknown
CP021462.1\|AWR38881.1\|3071909_3072470_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
CP021462.1\|AWR38879.1\|3070080_3070827_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
CP021462.1\|AWR38882.1\|3072466_3074023_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP021462.1\|AWR38869.1\|3060383_3060863_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP021462.1\|AWR38880.1\|3070837_3071896_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
CP021462.1\|AWR38868.1\|3059337_3060387_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP021462.1\|AWR38873.1\|3063058_3064498_-\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235349
CP021462.1\|AWR38867.1\|3058595_3059357_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP021462.1\|AWR38877.1\|3068531_3069452_-\|subtype-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP021462.1\|AWR40630.1\|3077142_3078096_+\|secreted-effector-protein-SopD	unknown	unknown	gnl\|CDD\|185277
CP021462.1\|AWR38876.1\|3068238_3068532_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP021462.1\|AWR38875.1\|3065666_3066713_+\|Zn-dependent-exopeptidase-M28	unknown	unknown	gnl\|CDD\|182299
CP021462.1\|AWR38872.1\|3062466_3063072_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP021462.1\|AWR38883.1\|3074034_3076698_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124

Protein	Function_ID	Function_description	E-value
CP021462.1\|AWR38874.1\|3064507_3065416_-\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP021462.1\|AWR38866.1\|3057975_3058602_-\|protein-L-isoaspartate-O-methyltransferase	gnl\|CDD\|178974	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase.	7.37904e-129
CP021462.1\|AWR38871.1\|3061591_3061903_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
CP021462.1\|AWR38878.1\|3069448_3070099_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.11215e-74
CP021462.1\|AWR38870.1\|3060862_3061573_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.67998e-119
CP021462.1\|AWR38881.1\|3071909_3072470_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
CP021462.1\|AWR38879.1\|3070080_3070827_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.90971e-48
CP021462.1\|AWR38882.1\|3072466_3074023_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP021462.1\|AWR38869.1\|3060383_3060863_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104
CP021462.1\|AWR38880.1\|3070837_3071896_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.67517e-131
CP021462.1\|AWR38868.1\|3059337_3060387_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP021462.1\|AWR38873.1\|3063058_3064498_-\|sulfate-adenylyltransferase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP021462.1\|AWR38867.1\|3058595_3059357_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
CP021462.1\|AWR38877.1\|3068531_3069452_-\|subtype-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.59811e-156
CP021462.1\|AWR40630.1\|3077142_3078096_+\|secreted-effector-protein-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP021462.1\|AWR38876.1\|3068238_3068532_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
CP021462.1\|AWR38875.1\|3065666_3066713_+\|Zn-dependent-exopeptidase-M28	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP021462.1\|AWR38872.1\|3062466_3063072_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
CP021462.1\|AWR38883.1\|3074034_3076698_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0

>CP021462.1|AWR38875.1|3065666_3066713_+|Zn-dependent-exopeptidase-M28
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>CP021462.1|AWR38874.1|3064507_3065416_-|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>CP021462.1|AWR38873.1|3063058_3064498_-|sulfate-adenylyltransferase
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTERRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>CP021462.1|AWR38872.1|3062466_3063072_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>CP021462.1|AWR38871.1|3061591_3061903_-|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>CP021462.1|AWR38870.1|3060862_3061573_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLYDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>CP021462.1|AWR38869.1|3060383_3060863_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>CP021462.1|AWR38868.1|3059337_3060387_-|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>CP021462.1|AWR38867.1|3058595_3059357_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>CP021462.1|AWR38866.1|3057975_3058602_-|protein-L-isoaspartate-O-methyltransferase
MVSGRVQALLEQLRAQGIRDEQVLNALAAVPREKFIDEAFEHKAWENIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVHHVCSVERIKGLQWQARRRLKQLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMAQLDEGGILVLPVGDEQQFLKRVRRRGGEFIIDTVEAVRFVPLVKGELA
>CP021462.1|AWR38876.1|3068238_3068532_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>CP021462.1|AWR38877.1|3068531_3069452_-|subtype-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRAVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>CP021462.1|AWR38878.1|3069448_3070099_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGSKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLREASVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVINEPALFLQRLAQGFGKSRAFGCGMMMIKPGDDA
>CP021462.1|AWR38879.1|3070080_3070827_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQTSLQHPVFPLYLGRKSHPLALPLAPQLLEGSAAGVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>CP021462.1|AWR38880.1|3070837_3071896_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>CP021462.1|AWR38881.1|3071909_3072470_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>CP021462.1|AWR38882.1|3072466_3074023_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>CP021462.1|AWR38883.1|3074034_3076698_-|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>CP021462.1|AWR38884.1|3076802_3077027_+|hypothetical-protein
MPAQFYIFFRNIYPTNNYYKFFRLFLLEEALKEASSNAFCINQNLKKTTICGESSTFCLNYRHHKGLPTINVLY
>CP021462.1|AWR40630.1|3077142_3078096_+|secreted-effector-protein-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT

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Crispr_ID: CP021462_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP021462_3

3084274-3085401

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

18 spacers

cas3,cas8e

The CRISPR arrays of CP021462_3

>merge|CP021462|3|3084274-3085401|CRISPRCasFinder,CRT,PILER-CR
ACGGCTATCCTTGTTGGCGCGGGGAACACATCTTCATATTGCGTGACGCTGCCGATGAACGCGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTATCAGCTAACCATTTCCAGAACTCGTCCGGTTTATCCCTGCTGGCGCGGGGAACACTATAATATGAATTAATTTTTGCGCATAACCTGCGGTTTATCCCCGCTGGCGCGGGGAACACTGCCCGTTCTGCCTCTTCGCACTCTCGATCAACGGTTTATCCCCGCTGGCGCGGGGAACACTGCGTAATGGGCTACCTGAACTTCACATATCCCGGTTTATCCCCGCTAGCGCGGGGAACATATTAAGCGCGCAAAGTTTGGGTTAATTGGACACGGTTTATCCCCGCTGGCGCGGGGAACACCGTATTCGTCACACAGCCCCGTCCAGAAATGACGGTTTATCCCCGCTGGCACGGGGAACACTAACGAACTGAATAAAATGTCAGAAAGTGACGCGGCTTATCCCCGCTGGCGCGGGGAACACGCAGCTTAGCGACGAAATTAAAACCGAACTCACCGGTTTATCCCCGCTGGCGCGGGGAACACGGTAAAGCCACACCATTTTTTATTGACCTCGCCGGTTTATCCCCGCTGGCGCGGGGAACACCTAGGAGGCGTAATGAATACTACGTATCAAAACGGTTTATCCCCGCTGGCGCGGGGAACACGTGGTGGCCTCAAATAAATTCGAGCGCTGGAGCGGTTTATCCCCGCTGGCGCGGGGAACACTCGACGTGGACGAGGAGTTACTCAACCGCTGCCGGTTTATCCCCGCTGGCGCGGGGAACACAGCGCCACATGGCCCACCGGCACCACCCGATCCGGTTTATCCCCGCTGGCGCGGGGAACACAAATGACCAAATCAGAAATCTTCACCAAAGCCCGGTTTATCCCCGCTGGCGCGGGGAACACTAATGGCCACAGTAAGTCAAACGGTTCTGGAACGGTTTATCCCCGCTGGCGCGGGGAACACGAGTCCGGGGGTTATATAGTTATTTAATGAGCCGGTTTATCCCCGCTGGCGCGGGGAACACGATGTAACTGATAGCGAAATATATTGGGATAACGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP021462|3|4|3084274-3085401|CRISPRCasFinder
ACGGCTATCCTTGTTGGCGCGGGGAACAC	ATCTTCATATTGCGTGACGCTGCCGATGAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCTGCTGGCGCGGGGAACAC	TATAATATGAATTAATTTTTGCGCATAACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGTAATGGGCTACCTGAACTTCACATATCC
CGGTTTATCCCCGCTAGCGCGGGGAACAT	ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTATTCGTCACACAGCCCCGTCCAGAAATGA
CGGTTTATCCCCGCTGGCACGGGGAACAC	TAACGAACTGAATAAAATGTCAGAAAGTGACG
CGGCTTATCCCCGCTGGCGCGGGGAACAC	GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAAAGCCACACCATTTTTTATTGACCTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTAGGAGGCGTAATGAATACTACGTATCAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTGGCCTCAAATAAATTCGAGCGCTGGAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGACGTGGACGAGGAGTTACTCAACCGCTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCGCCACATGGCCCACCGGCACCACCCGATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAATGACCAAATCAGAAATCTTCACCAAAGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATGGCCACAGTAAGTCAAACGGTTCTGGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGTCCGGGGGTTATATAGTTATTTAATGAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATGTAACTGATAGCGAAATATATTGGGATAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP021462|3|3|3084274-3085401|CRT
ACGGCTATCCTTGTTGGCGCGGGGAACAC	ATCTTCATATTGCGTGACGCTGCCGATGAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCTGCTGGCGCGGGGAACAC	TATAATATGAATTAATTTTTGCGCATAACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGTAATGGGCTACCTGAACTTCACATATCC
CGGTTTATCCCCGCTAGCGCGGGGAACAT	ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTATTCGTCACACAGCCCCGTCCAGAAATGA
CGGTTTATCCCCGCTGGCACGGGGAACAC	TAACGAACTGAATAAAATGTCAGAAAGTGACG
CGGCTTATCCCCGCTGGCGCGGGGAACAC	GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAAAGCCACACCATTTTTTATTGACCTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTAGGAGGCGTAATGAATACTACGTATCAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTGGCCTCAAATAAATTCGAGCGCTGGAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGACGTGGACGAGGAGTTACTCAACCGCTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCGCCACATGGCCCACCGGCACCACCCGATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAATGACCAAATCAGAAATCTTCACCAAAGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATGGCCACAGTAAGTCAAACGGTTCTGGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGTCCGGGGGTTATATAGTTATTTAATGAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATGTAACTGATAGCGAAATATATTGGGATAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP021462|3|2|3084335-3085401|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCTGCTGGCGCGGGGAACAC	TATAATATGAATTAATTTTTGCGCATAACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGTAATGGGCTACCTGAACTTCACATATCC
CGGTTTATCCCCGCTAGCGCGGGGAACAT	ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTATTCGTCACACAGCCCCGTCCAGAAATGA
CGGTTTATCCCCGCTGGCACGGGGAACAC	TAACGAACTGAATAAAATGTCAGAAAGTGACG
CGGCTTATCCCCGCTGGCGCGGGGAACAC	GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAAAGCCACACCATTTTTTATTGACCTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTAGGAGGCGTAATGAATACTACGTATCAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTGGCCTCAAATAAATTCGAGCGCTGGAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGACGTGGACGAGGAGTTACTCAACCGCTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCGCCACATGGCCCACCGGCACCACCCGATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAATGACCAAATCAGAAATCTTCACCAAAGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATGGCCACAGTAAGTCAAACGGTTCTGGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGTCCGGGGGTTATATAGTTATTTAATGAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATGTAACTGATAGCGAAATATATTGGGATAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
CP021462.1\|AWR40630.1\|3077142_3078096_+\|secreted-effector-protein-SopD	unknown	unknown	gnl\|CDD\|185277
CP021462.1\|AWR38884.1\|3076802_3077027_+\|hypothetical-protein	unknown	unknown	unknown
CP021462.1\|AWR38891.1\|3086504_3087803_-\|enolase	unknown	unknown	gnl\|CDD\|234617
CP021462.1\|AWR38895.1\|3091580_3091937_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|226136
CP021462.1\|AWR38890.1\|3085697_3086369_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP021462.1\|AWR38896.1\|3092020_3094255_-\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
CP021462.1\|AWR38888.1\|3082928_3083291_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP021462.1\|AWR38882.1\|3072466_3074023_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP021462.1\|AWR38899.1\|3098459_3099602_-\|glycerate-kinase	unknown	unknown	gnl\|CDD\|224840
CP021462.1\|AWR38889.1\|3083378_3084176_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
CP021462.1\|AWR38887.1\|3080705_3082505_-\|assimilatory-sulfite-reductase-(NADPH)-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP021462.1\|AWR38898.1\|3095659_3098416_+\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
CP021462.1\|AWR38893.1\|3089750_3090551_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP021462.1\|AWR38883.1\|3074034_3076698_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP021462.1\|AWR38885.1\|3078183_3078918_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP021462.1\|AWR38894.1\|3091318_3091615_-\|RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
CP021462.1\|AWR40631.1\|3082829_3083000_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown
CP021462.1\|AWR38892.1\|3087885_3089523_-\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
CP021462.1\|AWR38886.1\|3078993_3080706_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP021462.1\|AWR38897.1\|3094306_3095602_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291

Protein	Function_ID	Function_description	E-value
CP021462.1\|AWR40630.1\|3077142_3078096_+\|secreted-effector-protein-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP021462.1\|AWR38882.1\|3072466_3074023_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP021462.1\|AWR38895.1\|3091580_3091937_-\|transcriptional-regulator	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.12601e-20
CP021462.1\|AWR38890.1\|3085697_3086369_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
CP021462.1\|AWR38896.1\|3092020_3094255_-\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
CP021462.1\|AWR38888.1\|3082928_3083291_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
CP021462.1\|AWR38891.1\|3086504_3087803_-\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP021462.1\|AWR38899.1\|3098459_3099602_-\|glycerate-kinase	gnl\|CDD\|224840	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism].	0
CP021462.1\|AWR38886.1\|3078993_3080706_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP021462.1\|AWR38887.1\|3080705_3082505_-\|assimilatory-sulfite-reductase-(NADPH)-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP021462.1\|AWR38898.1\|3095659_3098416_+\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
CP021462.1\|AWR38893.1\|3089750_3090551_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.52469e-158
CP021462.1\|AWR38883.1\|3074034_3076698_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
CP021462.1\|AWR38885.1\|3078183_3078918_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40487e-139
CP021462.1\|AWR38894.1\|3091318_3091615_-\|RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	1.63617e-13
CP021462.1\|AWR38892.1\|3087885_3089523_-\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP021462.1\|AWR38889.1\|3083378_3084176_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	8.44116e-102
CP021462.1\|AWR38897.1\|3094306_3095602_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0

>CP021462.1|AWR38889.1|3083378_3084176_-|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKVRPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDSSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP021462.1|AWR38888.1|3082928_3083291_+|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>CP021462.1|AWR40631.1|3082829_3083000_-|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVRQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>CP021462.1|AWR38887.1|3080705_3082505_-|assimilatory-sulfite-reductase-(NADPH)-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPRVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRSFMQQRAAEGVEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>CP021462.1|AWR38886.1|3078993_3080706_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENIAEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP021462.1|AWR38885.1|3078183_3078918_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP021462.1|AWR40630.1|3077142_3078096_+|secreted-effector-protein-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>CP021462.1|AWR38884.1|3076802_3077027_+|hypothetical-protein
MPAQFYIFFRNIYPTNNYYKFFRLFLLEEALKEASSNAFCINQNLKKTTICGESSTFCLNYRHHKGLPTINVLY
>CP021462.1|AWR38883.1|3074034_3076698_-|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>CP021462.1|AWR38882.1|3072466_3074023_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>CP021462.1|AWR38890.1|3085697_3086369_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP021462.1|AWR38891.1|3086504_3087803_-|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP021462.1|AWR38892.1|3087885_3089523_-|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>CP021462.1|AWR38893.1|3089750_3090551_-|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSFPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>CP021462.1|AWR38894.1|3091318_3091615_-|RelE/ParE-family-toxin
MRMVKLTPKASEDLENIWHYGWQHFGEIQADRYINHLSEIFSIMSANNIGTPRPELGEYIYALPFKRHIIYFIQSVTEVIVIRILSQNQDAGKHVNWL
>CP021462.1|AWR38895.1|3091580_3091937_-|transcriptional-regulator
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>CP021462.1|AWR38896.1|3092020_3094255_-|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNIQAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>CP021462.1|AWR38897.1|3094306_3095602_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLAALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVIGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>CP021462.1|AWR38898.1|3095659_3098416_+|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNIELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>CP021462.1|AWR38899.1|3098459_3099602_-|glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVKAMVEATAGRIVHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIAQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSLTADVSVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP021462_2	2.12\|3067425\|32\|CP021462\|PILER-CR	3067425-3067456	32	CP051275	Salmonella phage SW-37, complete genome	24295-24326	1	0.969
CP021462_2	2.12\|3067425\|32\|CP021462\|PILER-CR	3067425-3067456	32	KC139516	Salmonella phage FSL SP-016, partial genome	43971-44002	1	0.969
CP021462_2	2.26\|3067410\|32\|CP021462\|CRT,CRISPRCasFinder	3067410-3067441	32	CP051275	Salmonella phage SW-37, complete genome	24295-24326	1	0.969
CP021462_2	2.26\|3067410\|32\|CP021462\|CRT,CRISPRCasFinder	3067410-3067441	32	KC139516	Salmonella phage FSL SP-016, partial genome	43971-44002	1	0.969
CP021462_3	3.5\|3084547\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3084547-3084578	32	NZ_CP034699	Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence	177960-177991	1	0.969
CP021462_3	3.5\|3084547\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3084547-3084578	32	NZ_CP034710	Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence	67131-67162	1	0.969
CP021462_2	2.12\|3067425\|32\|CP021462\|PILER-CR	3067425-3067456	32	JQ182729	Enterobacterial phage mEp390, complete genome	23951-23982	3	0.906
CP021462_2	2.26\|3067410\|32\|CP021462\|CRT,CRISPRCasFinder	3067410-3067441	32	JQ182729	Enterobacterial phage mEp390, complete genome	23951-23982	3	0.906
CP021462_2	2.9\|3067245\|28\|CP021462\|PILER-CR	3067245-3067272	28	NC_009927	Acaryochloris marina MBIC11017 plasmid pREB2, complete sequence	337987-338014	5	0.821
CP021462_3	3.14\|3085097\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085097-3085128	32	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1387347-1387378	5	0.844
CP021462_3	3.14\|3085097\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085097-3085128	32	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1461559-1461590	5	0.844
CP021462_3	3.14\|3085097\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085097-3085128	32	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	599340-599371	5	0.844
CP021462_2	2.14\|3067547\|32\|CP021462\|PILER-CR	3067547-3067578	32	MT774487	Salmonella phage MG40, complete genome	21746-21777	6	0.812
CP021462_2	2.28\|3067532\|32\|CP021462\|CRT,CRISPRCasFinder	3067532-3067563	32	MT774487	Salmonella phage MG40, complete genome	21746-21777	6	0.812
CP021462_3	3.14\|3085097\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085097-3085128	32	NC_012528	Deinococcus deserti VCD115 plasmid 3, complete sequence	121315-121346	6	0.812
CP021462_2	2.8\|3067184\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3067184-3067215	32	NZ_CP013929	Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence	188177-188208	7	0.781
CP021462_2	2.8\|3067184\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3067184-3067215	32	CP013931	Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence	192938-192969	7	0.781
CP021462_2	2.8\|3067184\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3067184-3067215	32	NC_019394	Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence	188204-188235	7	0.781
CP021462_2	2.14\|3067547\|32\|CP021462\|PILER-CR	3067547-3067578	32	JQ288021	Salmonella phage SPN3UB, complete genome	39452-39483	7	0.781
CP021462_2	2.14\|3067547\|32\|CP021462\|PILER-CR	3067547-3067578	32	MH370364	Salmonella phage S107, complete genome	29959-29990	7	0.781
CP021462_2	2.14\|3067547\|32\|CP021462\|PILER-CR	3067547-3067578	32	MH370382	Salmonella phage S135, complete genome	29959-29990	7	0.781
CP021462_2	2.14\|3067547\|32\|CP021462\|PILER-CR	3067547-3067578	32	MH370383	Salmonella phage S137, complete genome	29959-29990	7	0.781
CP021462_2	2.16\|3067669\|32\|CP021462\|PILER-CR	3067669-3067700	32	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	535406-535437	7	0.781
CP021462_2	2.18\|3067791\|32\|CP021462\|PILER-CR	3067791-3067822	32	NZ_CP024773	Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence	29048-29079	7	0.781
CP021462_2	2.18\|3067791\|32\|CP021462\|PILER-CR	3067791-3067822	32	NZ_CP041075	Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence	142294-142325	7	0.781
CP021462_2	2.28\|3067532\|32\|CP021462\|CRT,CRISPRCasFinder	3067532-3067563	32	JQ288021	Salmonella phage SPN3UB, complete genome	39452-39483	7	0.781
CP021462_2	2.28\|3067532\|32\|CP021462\|CRT,CRISPRCasFinder	3067532-3067563	32	MH370364	Salmonella phage S107, complete genome	29959-29990	7	0.781
CP021462_2	2.28\|3067532\|32\|CP021462\|CRT,CRISPRCasFinder	3067532-3067563	32	MH370382	Salmonella phage S135, complete genome	29959-29990	7	0.781
CP021462_2	2.28\|3067532\|32\|CP021462\|CRT,CRISPRCasFinder	3067532-3067563	32	MH370383	Salmonella phage S137, complete genome	29959-29990	7	0.781
CP021462_2	2.30\|3067654\|32\|CP021462\|CRT,CRISPRCasFinder	3067654-3067685	32	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	535406-535437	7	0.781
CP021462_2	2.32\|3067776\|32\|CP021462\|CRT,CRISPRCasFinder	3067776-3067807	32	NZ_CP024773	Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence	29048-29079	7	0.781
CP021462_2	2.32\|3067776\|32\|CP021462\|CRT,CRISPRCasFinder	3067776-3067807	32	NZ_CP041075	Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence	142294-142325	7	0.781
CP021462_3	3.14\|3085097\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085097-3085128	32	NZ_CP044078	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed1, complete sequence	135155-135186	7	0.781
CP021462_3	3.14\|3085097\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085097-3085128	32	NZ_CP031081	Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence	195902-195933	7	0.781
CP021462_3	3.14\|3085097\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085097-3085128	32	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	581076-581107	7	0.781
CP021462_3	3.14\|3085097\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085097-3085128	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	122557-122588	7	0.781
CP021462_3	3.14\|3085097\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085097-3085128	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	529537-529568	7	0.781
CP021462_3	3.14\|3085097\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085097-3085128	32	NZ_CP034156	Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence	327444-327475	7	0.781
CP021462_2	2.2\|3066818\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3066818-3066849	32	MN855803	Bacteriophage sp. isolate 108, partial genome	10057-10088	8	0.75
CP021462_2	2.17\|3067730\|32\|CP021462\|PILER-CR	3067730-3067761	32	NZ_CP016179	Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence	203354-203385	8	0.75
CP021462_2	2.31\|3067715\|32\|CP021462\|CRT,CRISPRCasFinder	3067715-3067746	32	NZ_CP016179	Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence	203354-203385	8	0.75
CP021462_3	3.8\|3084730\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3084730-3084761	32	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	135469-135500	8	0.75
CP021462_3	3.8\|3084730\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3084730-3084761	32	NZ_CP031801	Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence	11654-11685	8	0.75
CP021462_3	3.16\|3085219\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085219-3085250	32	NZ_CP014942	Rhodococcus sp. BH4 plasmid, complete sequence	462005-462036	8	0.75
CP021462_3	3.17\|3085280\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085280-3085311	32	NC_028940	Pectobacterium bacteriophage PM2, complete genome	79087-79118	8	0.75
CP021462_2	2.14\|3067547\|32\|CP021462\|PILER-CR	3067547-3067578	32	MK448228	Klebsiella phage ST15-VIM1phi2.1, complete genome	32866-32897	9	0.719
CP021462_2	2.20\|3067913\|32\|CP021462\|PILER-CR	3067913-3067944	32	MT162468	Synechococcus phage S-H25, complete genome	69929-69960	9	0.719
CP021462_2	2.28\|3067532\|32\|CP021462\|CRT,CRISPRCasFinder	3067532-3067563	32	MK448228	Klebsiella phage ST15-VIM1phi2.1, complete genome	32866-32897	9	0.719
CP021462_2	2.34\|3067898\|32\|CP021462\|CRT,CRISPRCasFinder	3067898-3067929	32	MT162468	Synechococcus phage S-H25, complete genome	69929-69960	9	0.719
CP021462_3	3.10\|3084853\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3084853-3084884	32	MN693046	Marine virus AFVG_25M413, complete genome	4323-4354	9	0.719
CP021462_3	3.10\|3084853\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3084853-3084884	32	MN693008	Marine virus AFVG_117M9, complete genome	4316-4347	9	0.719
CP021462_3	3.13\|3085036\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085036-3085067	32	NZ_CP021372	Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence	353298-353329	9	0.719
CP021462_3	3.13\|3085036\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085036-3085067	32	AM749121	Streptococcus phage M102 complete genome	7893-7924	9	0.719
CP021462_3	3.13\|3085036\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085036-3085067	32	NC_012884	Streptococcus phage M102, complete genome	7893-7924	9	0.719
CP021462_2	2.1\|3066757\|32\|CP021462\|CRISPRCasFinder,CRT	3066757-3066788	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1151729-1151760	10	0.688
CP021462_2	2.1\|3066757\|32\|CP021462\|CRISPRCasFinder,CRT	3066757-3066788	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	661429-661460	10	0.688
CP021462_2	2.12\|3067425\|32\|CP021462\|PILER-CR	3067425-3067456	32	NZ_AP022571	Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence	153476-153507	10	0.688
CP021462_2	2.20\|3067913\|32\|CP021462\|PILER-CR	3067913-3067944	32	LN681539	Clostridium phage phiCD505, complete genome	8933-8964	10	0.688
CP021462_2	2.20\|3067913\|32\|CP021462\|PILER-CR	3067913-3067944	32	JX145341	Clostridium phage phiMMP02, complete genome	8932-8963	10	0.688
CP021462_2	2.20\|3067913\|32\|CP021462\|PILER-CR	3067913-3067944	32	NC_011398	Clostridium phage phiCD27, complete genome	8924-8955	10	0.688
CP021462_2	2.20\|3067913\|32\|CP021462\|PILER-CR	3067913-3067944	32	NC_048642	Clostridium phage CDKM9, complete genome	8871-8902	10	0.688
CP021462_2	2.20\|3067913\|32\|CP021462\|PILER-CR	3067913-3067944	32	KX228400	Clostridium phage CDKM15, complete genome	9066-9097	10	0.688
CP021462_2	2.26\|3067410\|32\|CP021462\|CRT,CRISPRCasFinder	3067410-3067441	32	NZ_AP022571	Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence	153476-153507	10	0.688
CP021462_2	2.34\|3067898\|32\|CP021462\|CRT,CRISPRCasFinder	3067898-3067929	32	LN681539	Clostridium phage phiCD505, complete genome	8933-8964	10	0.688
CP021462_2	2.34\|3067898\|32\|CP021462\|CRT,CRISPRCasFinder	3067898-3067929	32	JX145341	Clostridium phage phiMMP02, complete genome	8932-8963	10	0.688
CP021462_2	2.34\|3067898\|32\|CP021462\|CRT,CRISPRCasFinder	3067898-3067929	32	NC_011398	Clostridium phage phiCD27, complete genome	8924-8955	10	0.688
CP021462_2	2.34\|3067898\|32\|CP021462\|CRT,CRISPRCasFinder	3067898-3067929	32	NC_048642	Clostridium phage CDKM9, complete genome	8871-8902	10	0.688
CP021462_2	2.34\|3067898\|32\|CP021462\|CRT,CRISPRCasFinder	3067898-3067929	32	KX228400	Clostridium phage CDKM15, complete genome	9066-9097	10	0.688
CP021462_3	3.1\|3084303\|32\|CP021462\|CRISPRCasFinder,CRT	3084303-3084334	32	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	146919-146950	10	0.688
CP021462_3	3.4\|3084486\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3084486-3084517	32	NZ_CP044072	Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence	99817-99848	10	0.688
CP021462_3	3.12\|3084975\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3084975-3085006	32	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	1134787-1134818	10	0.688
CP021462_3	3.17\|3085280\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085280-3085311	32	NZ_CP042995	Acinetobacter nosocomialis strain J1A plasmid unnamed1, complete sequence	68697-68728	10	0.688
CP021462_3	3.17\|3085280\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085280-3085311	32	NZ_CP026129	Acinetobacter baumannii strain ABNIH28 plasmid pABA-2f10, complete sequence	43950-43981	10	0.688
CP021462_3	3.17\|3085280\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085280-3085311	32	NZ_CP038501	Acinetobacter baumannii strain CIAT758 plasmid unnamed1, complete sequence	49131-49162	10	0.688
CP021462_3	3.17\|3085280\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085280-3085311	32	NZ_CP046044	Acinetobacter towneri strain 19110F47 plasmid p19110F47-2, complete sequence	66631-66662	10	0.688
CP021462_3	3.17\|3085280\|32\|CP021462\|CRISPRCasFinder,CRT,PILER-CR	3085280-3085311	32	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	147167-147198	10	0.688

1. spacer 2.12|3067425|32|CP021462|PILER-CR matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 1, identity: 0.969

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
cggaccgatggggccaacatcgccgaacgtgg	Protospacer
.*******************************

2. spacer 2.12|3067425|32|CP021462|PILER-CR matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 1, identity: 0.969

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
tggaccgatggggccaacatcgccgaatgtgg	Protospacer
***************************.****

3. spacer 2.26|3067410|32|CP021462|CRT,CRISPRCasFinder matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 1, identity: 0.969

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
cggaccgatggggccaacatcgccgaacgtgg	Protospacer
.*******************************

4. spacer 2.26|3067410|32|CP021462|CRT,CRISPRCasFinder matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 1, identity: 0.969

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
tggaccgatggggccaacatcgccgaatgtgg	Protospacer
***************************.****

5. spacer 3.5|3084547|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 1, identity: 0.969

tgcgtaatgggctacctgaacttcacatatcc	CRISPR spacer
tgcgtagtgggctacctgaacttcacatatcc	Protospacer
******.*************************

6. spacer 3.5|3084547|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 1, identity: 0.969

tgcgtaatgggctacctgaacttcacatatcc	CRISPR spacer
tgcgtagtgggctacctgaacttcacatatcc	Protospacer
******.*************************

7. spacer 2.12|3067425|32|CP021462|PILER-CR matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 3, identity: 0.906

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
tggacctatggggccaacatcaccgaacgtag	Protospacer
****** **************.********.*

8. spacer 2.26|3067410|32|CP021462|CRT,CRISPRCasFinder matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 3, identity: 0.906

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
tggacctatggggccaacatcaccgaacgtag	Protospacer
****** **************.********.*

9. spacer 2.9|3067245|28|CP021462|PILER-CR matches to NC_009927 (Acaryochloris marina MBIC11017 plasmid pREB2, complete sequence) position: , mismatch: 5, identity: 0.821

gatcgagtaacgtgcgctggaacgcgtc	CRISPR spacer
gattgaggaacgtgcgctggaacgatta	Protospacer
***.*** ****************  *

10. spacer 3.14|3085097|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

-agcgccacatggcccaccggcaccacccgatc	CRISPR spacer
cagcggc-tatgccccagcggcaccacccgatc	Protospacer
 **** * .*** **** ***************

11. spacer 3.14|3085097|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

-agcgccacatggcccaccggcaccacccgatc	CRISPR spacer
cagcggc-tatgccccagcggcaccacccgatc	Protospacer
 **** * .*** **** ***************

12. spacer 3.14|3085097|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

-agcgccacatggcccaccggcaccacccgatc	CRISPR spacer
cagcggc-tatgccccagcggcaccacccgatc	Protospacer
 **** * .*** **** ***************

13. spacer 2.14|3067547|32|CP021462|PILER-CR matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.812

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
ccagccagtgccggtagtgcctgatgaaatgg	Protospacer
****  **********************  .

14. spacer 2.28|3067532|32|CP021462|CRT,CRISPRCasFinder matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.812

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
ccagccagtgccggtagtgcctgatgaaatgg	Protospacer
****  **********************  .

15. spacer 3.14|3085097|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NC_012528 (Deinococcus deserti VCD115 plasmid 3, complete sequence) position: , mismatch: 6, identity: 0.812

--agcgccacatggcccaccggcaccacccgatc	CRISPR spacer
ccaacgc--catggccgacccgcaccacccgacc	Protospacer
  *.***  ******* *** ***********.*

16. spacer 2.8|3067184|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013929 (Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence) position: , mismatch: 7, identity: 0.781

aatcact--gcgggggtatttagcggaaacggct	CRISPR spacer
--tcgctgcgcgggggtatttagcgaaatcgggg	Protospacer
  **.**  ****************.** ***

17. spacer 2.8|3067184|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to CP013931 (Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence) position: , mismatch: 7, identity: 0.781

aatcact--gcgggggtatttagcggaaacggct	CRISPR spacer
--tcgctgcgcgggggtatttagcgaaatcgggg	Protospacer
  **.**  ****************.** ***

18. spacer 2.8|3067184|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NC_019394 (Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence) position: , mismatch: 7, identity: 0.781

aatcact--gcgggggtatttagcggaaacggct	CRISPR spacer
--tcgctgcgcgggggtatttagcgaaatcgggg	Protospacer
  **.**  ****************.** ***

19. spacer 2.14|3067547|32|CP021462|PILER-CR matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

20. spacer 2.14|3067547|32|CP021462|PILER-CR matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

21. spacer 2.14|3067547|32|CP021462|PILER-CR matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

22. spacer 2.14|3067547|32|CP021462|PILER-CR matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

23. spacer 2.16|3067669|32|CP021462|PILER-CR matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ggcagcgggcgaggcaaacacattcggggcgt	CRISPR spacer
gccacggcgcgaggcaaacacattcaggtcgc	Protospacer
* **  * *****************.** **.

24. spacer 2.18|3067791|32|CP021462|PILER-CR matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

25. spacer 2.18|3067791|32|CP021462|PILER-CR matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

26. spacer 2.28|3067532|32|CP021462|CRT,CRISPRCasFinder matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

27. spacer 2.28|3067532|32|CP021462|CRT,CRISPRCasFinder matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

28. spacer 2.28|3067532|32|CP021462|CRT,CRISPRCasFinder matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

29. spacer 2.28|3067532|32|CP021462|CRT,CRISPRCasFinder matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

30. spacer 2.30|3067654|32|CP021462|CRT,CRISPRCasFinder matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ggcagcgggcgaggcaaacacattcggggcgt	CRISPR spacer
gccacggcgcgaggcaaacacattcaggtcgc	Protospacer
* **  * *****************.** **.

31. spacer 2.32|3067776|32|CP021462|CRT,CRISPRCasFinder matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

32. spacer 2.32|3067776|32|CP021462|CRT,CRISPRCasFinder matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

33. spacer 3.14|3085097|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044078 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacccgatc--	CRISPR spacer
gccgccacatggcccaccgccaccagc--gtcgg	Protospacer
. ***************** ***** *  .**

34. spacer 3.14|3085097|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031081 (Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacccgatc--	CRISPR spacer
gccgccacatggcccaccgccaccagc--gtcgg	Protospacer
. ***************** ***** *  .**

35. spacer 3.14|3085097|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacc-cgatc	CRISPR spacer
cccgccacatggcccagcggctccatcgccat-	Protospacer
  ************** **** ***.* * **

36. spacer 3.14|3085097|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacc-cgatc	CRISPR spacer
cccgccacatggcccagcggctccatcgccat-	Protospacer
  ************** **** ***.* * **

37. spacer 3.14|3085097|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacc-cgatc	CRISPR spacer
cccgccacatggcccagcggctccatcgccat-	Protospacer
  ************** **** ***.* * **

38. spacer 3.14|3085097|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacccgatc	CRISPR spacer
agccccacatggcgcaccggcacggcactagc	Protospacer
*** ********* ********* .* * * *

39. spacer 2.2|3066818|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to MN855803 (Bacteriophage sp. isolate 108, partial genome) position: , mismatch: 8, identity: 0.75

gcgaaatagtggggaaaaacccctggttaacc	CRISPR spacer
tttcaatattggggaaaaacccctcgttacct	Protospacer
 .  **** *************** **** *.

40. spacer 2.17|3067730|32|CP021462|PILER-CR matches to NZ_CP016179 (Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggtaatttctcatctaacagcct-----gtacgcctc	CRISPR spacer
ggtaatttcgcatcaaacagccttattagtat-----	Protospacer
********* **** ********     ***.

41. spacer 2.31|3067715|32|CP021462|CRT,CRISPRCasFinder matches to NZ_CP016179 (Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggtaatttctcatctaacagcct-----gtacgcctc	CRISPR spacer
ggtaatttcgcatcaaacagccttattagtat-----	Protospacer
********* **** ********     ***.

42. spacer 3.8|3084730|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 8, identity: 0.75

taacgaactgaataaaatgtcagaaagtgacg	CRISPR spacer
ggcagaactgaataaaatgtctgatagtgaat	Protospacer
 .  ***************** ** *****

43. spacer 3.8|3084730|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031801 (Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

taacgaactgaataaaatgtcagaaagtgacg	CRISPR spacer
aaatgaactgaatacaatgtcagacacgcgcg	Protospacer
 **.********** ********* *   .**

44. spacer 3.16|3085219|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014942 (Rhodococcus sp. BH4 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

taatggccacagtaagtcaaacggttctggaa	CRISPR spacer
cggtggccacagtaaggcacacggttcggcag	Protospacer
...************* ** ******* * *.

45. spacer 3.17|3085280|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NC_028940 (Pectobacterium bacteriophage PM2, complete genome) position: , mismatch: 8, identity: 0.75

gagtccgggggttatatagttatttaatgagc	CRISPR spacer
gctctcgtgtgttatatagttatttaatgata	Protospacer
*  ..** * ********************

46. spacer 2.14|3067547|32|CP021462|PILER-CR matches to MK448228 (Klebsiella phage ST15-VIM1phi2.1, complete genome) position: , mismatch: 9, identity: 0.719

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcatccagcgccggtagtgccggatgaactca	Protospacer
 **   **.************ *******

47. spacer 2.20|3067913|32|CP021462|PILER-CR matches to MT162468 (Synechococcus phage S-H25, complete genome) position: , mismatch: 9, identity: 0.719

tcccattcaccaacaacaatatcgccctgcaa----	CRISPR spacer
ccccaatcaccaacaataatatcgt----cagtgtt	Protospacer
.**** **********.*******.    **.

48. spacer 2.28|3067532|32|CP021462|CRT,CRISPRCasFinder matches to MK448228 (Klebsiella phage ST15-VIM1phi2.1, complete genome) position: , mismatch: 9, identity: 0.719

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcatccagcgccggtagtgccggatgaactca	Protospacer
 **   **.************ *******

49. spacer 2.34|3067898|32|CP021462|CRT,CRISPRCasFinder matches to MT162468 (Synechococcus phage S-H25, complete genome) position: , mismatch: 9, identity: 0.719

tcccattcaccaacaacaatatcgccctgcaa----	CRISPR spacer
ccccaatcaccaacaataatatcgt----cagtgtt	Protospacer
.**** **********.*******.    **.

50. spacer 3.10|3084853|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to MN693046 (Marine virus AFVG_25M413, complete genome) position: , mismatch: 9, identity: 0.719

ggtaaagccacaccattttttattgacctcgc	CRISPR spacer
tctgaaaccacaccattttttgttgaccctaa	Protospacer
  *.**.**************.******...

51. spacer 3.10|3084853|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to MN693008 (Marine virus AFVG_117M9, complete genome) position: , mismatch: 9, identity: 0.719

ggtaaagccacaccattttttattgacctcgc	CRISPR spacer
tctgaaaccacaccattttttgttgaccctaa	Protospacer
  *.**.**************.******...

52. spacer 3.13|3085036|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021372 (Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence) position: , mismatch: 9, identity: 0.719

tcgacgtggacgaggagttactcaaccgctgc	CRISPR spacer
gttcagtggacgaggagttcctcacccgcacc	Protospacer
 .   ************** **** ****  *

53. spacer 3.13|3085036|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to AM749121 (Streptococcus phage M102 complete genome) position: , mismatch: 9, identity: 0.719

tcgacgtggacgaggagttactcaaccgctgc	CRISPR spacer
ttgggctggaccaggagttactccaccgcctt	Protospacer
*.*.  ***** *********** *****. .

54. spacer 3.13|3085036|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NC_012884 (Streptococcus phage M102, complete genome) position: , mismatch: 9, identity: 0.719

tcgacgtggacgaggagttactcaaccgctgc	CRISPR spacer
ttgggctggaccaggagttactccaccgcctt	Protospacer
*.*.  ***** *********** *****. .

55. spacer 2.1|3066757|32|CP021462|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcagcccttgtcgactgcggaacgcccct	CRISPR spacer
tccctcaccctcgtcgactgcggaccgcccgg	Protospacer
*.... .****.************ *****

56. spacer 2.1|3066757|32|CP021462|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcagcccttgtcgactgcggaacgcccct	CRISPR spacer
tccctcaccctcgtcgactgcggaccgcccgg	Protospacer
*.... .****.************ *****

57. spacer 2.12|3067425|32|CP021462|PILER-CR matches to NZ_AP022571 (Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence) position: , mismatch: 10, identity: 0.688

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
cacctggatgggggccacatcgccgaacgagt	Protospacer
..  . ******* * ************* *

58. spacer 2.20|3067913|32|CP021462|PILER-CR matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

59. spacer 2.20|3067913|32|CP021462|PILER-CR matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

60. spacer 2.20|3067913|32|CP021462|PILER-CR matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

61. spacer 2.20|3067913|32|CP021462|PILER-CR matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

62. spacer 2.20|3067913|32|CP021462|PILER-CR matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

63. spacer 2.26|3067410|32|CP021462|CRT,CRISPRCasFinder matches to NZ_AP022571 (Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence) position: , mismatch: 10, identity: 0.688

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
cacctggatgggggccacatcgccgaacgagt	Protospacer
..  . ******* * ************* *

64. spacer 2.34|3067898|32|CP021462|CRT,CRISPRCasFinder matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

65. spacer 2.34|3067898|32|CP021462|CRT,CRISPRCasFinder matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

66. spacer 2.34|3067898|32|CP021462|CRT,CRISPRCasFinder matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

67. spacer 2.34|3067898|32|CP021462|CRT,CRISPRCasFinder matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

68. spacer 2.34|3067898|32|CP021462|CRT,CRISPRCasFinder matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

69. spacer 3.1|3084303|32|CP021462|CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

atcttcatattgcgtgacgctgccgatgaacg	CRISPR spacer
tgccggatatggcgtgacgatgccgatgatgt	Protospacer
  *.  **** ******** *********

70. spacer 3.4|3084486|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044072 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tgcccgttctgcctcttcgcactctcgatcaa	CRISPR spacer
tgcccgttctgtctcttggcactgccaccttc	Protospacer
***********.***** ***** .*. ..

71. spacer 3.12|3084975|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 10, identity: 0.688

gtggtggcctcaaataaattcgagcgctggag	CRISPR spacer
aaacttgcctcaaataaattcgcgcggtgttc	Protospacer
. . * **************** *** **

72. spacer 3.17|3085280|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042995 (Acinetobacter nosocomialis strain J1A plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gagtccgggggttatatagttatttaatgagc	CRISPR spacer
ttttttgggggttatacagttaattaatgctg	Protospacer
   *..**********.***** ******

73. spacer 3.17|3085280|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026129 (Acinetobacter baumannii strain ABNIH28 plasmid pABA-2f10, complete sequence) position: , mismatch: 10, identity: 0.688

gagtccgggggttatatagttatttaatgagc	CRISPR spacer
ttttttgggggttatacagttaattaatgctg	Protospacer
   *..**********.***** ******

74. spacer 3.17|3085280|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038501 (Acinetobacter baumannii strain CIAT758 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gagtccgggggttatatagttatttaatgagc	CRISPR spacer
ttttttgggggttatacagttaattaatgctg	Protospacer
   *..**********.***** ******

75. spacer 3.17|3085280|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046044 (Acinetobacter towneri strain 19110F47 plasmid p19110F47-2, complete sequence) position: , mismatch: 10, identity: 0.688

gagtccgggggttatatagttatttaatgagc	CRISPR spacer
ttttttgggggttatacagttaattaatgctg	Protospacer
   *..**********.***** ******

76. spacer 3.17|3085280|32|CP021462|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 10, identity: 0.688

gagtccgggggttatatagttatttaatgagc	CRISPR spacer
ttttttgggggttatacagttaattaatgctg	Protospacer
   *..**********.***** ******

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

364951 : 408364

Salmonella_virus(67.69%)

protease,terminase,integrase,tail,portal,lysis,coat

attL 355721:355737|attR 417625:417641

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
355721:355737	attL	NA	NA	NA	NA
AWR36284.1\|364951_366004_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	1.7e-112	58.5
AWR36285.1\|366286_367390_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	6.9e-61	39.8
AWR36286.1\|367401_368652_+	gamma-glutamyl-phosphate reductase	A0A1X9I5D4	Streptococcus_phage	1.6e-98	47.5
AWR40521.1\|368857_369526_-\|integrase	integrase	A0A192Y6Q1	Salmonella_phage	6.1e-129	100.0
AWR36287.1\|369897_370248_-	DNA-binding protein	A0A1R3Y5Z5	Salmonella_virus	8.3e-61	100.0
AWR36288.1\|370258_370852_-	hypothetical protein	A0A1R3Y5P7	Salmonella_virus	3.2e-113	100.0
AWR36289.1\|370923_371262_-	RNA-binding protein	A0A1R3Y5R3	Salmonella_virus	1.1e-49	98.9
AWR36290.1\|371200_372166_-	hypothetical protein	A0A1R3Y5Q8	Salmonella_virus	2.9e-172	100.0
AWR36291.1\|372176_372932_-	hypothetical protein	A0A1R3Y5Q7	Salmonella_virus	2.9e-151	100.0
AWR36292.1\|372931_373576_-	hypothetical protein	A0A1R3Y5T1	Salmonella_virus	2.3e-117	100.0
AWR36293.1\|373572_373983_-	hypothetical protein	A0A1R3Y5S0	Salmonella_virus	5.9e-74	100.0
AWR36294.1\|373979_374150_-	DUF2737 domain-containing protein	A0A220NQV6	Salmonella_phage	6.1e-25	100.0
AWR36295.1\|374160_374454_-	RecBCD nuclease inhibitor	A0A1R3Y5T7	Salmonella_virus	3.2e-50	100.0
AWR36296.1\|374500_374785_-	sigma-70 family RNA polymerase sigma factor	Q76H41	Enterobacteria_phage	1.4e-45	100.0
AWR36297.1\|374784_375492_-	recombinase	A0A1R3Y600	Salmonella_virus	4.1e-139	100.0
AWR36298.1\|375621_375810_-	protein kil	A0A1R3Y5S5	Salmonella_virus	1.6e-31	100.0
AWR36299.1\|375790_375943_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	A0A1R3Y5R2	Salmonella_virus	2.7e-24	100.0
AWR36300.1\|376266_376566_-	hypothetical protein	A0A1R3Y5U4	Salmonella_virus	2.3e-51	100.0
AWR36301.1\|376605_376806_-	restriction endonuclease	A0A1R3Y5S4	Salmonella_virus	1.0e-31	100.0
AWR36302.1\|376884_377217_-	hypothetical protein	A0A1R3Y5R1	Salmonella_virus	2.2e-55	100.0
AWR36303.1\|377236_377434_+	hypothetical protein	A0A075B8J1	Enterobacteria_phage	2.2e-10	94.3
AWR36304.1\|377580_377790_+	hypothetical protein	I6R0R9	Salmonella_phage	5.5e-28	91.3
AWR36305.1\|377825_378749_-	hypothetical protein	A0A1R3Y6Z6	Salmonella_virus	1.5e-181	100.0
AWR36306.1\|378837_379527_-	hypothetical protein	Q76H56	Enterobacteria_phage	1.3e-126	100.0
AWR36307.1\|379637_379853_+	transcriptional regulator	Q76H55	Enterobacteria_phage	1.3e-32	100.0
AWR36308.1\|379963_380245_+	hypothetical protein	Q76H54	Enterobacteria_phage	4.3e-44	100.0
AWR36309.1\|380279_380426_+	hypothetical protein	A0A075B8K7	Enterobacteria_phage	1.5e-19	100.0
AWR36310.1\|380418_381252_+	DNA replication protein	A0A1R3Y5R9	Salmonella_virus	3.8e-152	100.0
AWR36311.1\|381248_382625_+	replicative DNA helicase	A0A1R3Y5T0	Salmonella_virus	1.5e-254	100.0
AWR36312.1\|382621_382891_+	hypothetical protein	A0A1R3Y5U7	Salmonella_virus	6.4e-45	100.0
AWR36313.1\|382962_383235_+	DUF4752 domain-containing protein	A0A1R3Y5T8	Salmonella_virus	7.2e-44	100.0
AWR36314.1\|383244_383454_+	hypothetical protein	A0A1R3Y5S8	Salmonella_virus	1.1e-31	100.0
AWR36315.1\|383465_383759_+	hypothetical protein	A0A1R3Y5V7	Salmonella_virus	1.2e-47	100.0
AWR36316.1\|383761_383950_+	hypothetical protein	A0A1R3Y6Z7	Salmonella_virus	4.2e-27	100.0
AWR36317.1\|383906_384353_+	recombination protein NinB	A0A1R3Y605	Salmonella_virus	7.1e-81	100.0
AWR36318.1\|384349_384523_+	protein ninD	C6ZR56	Salmonella_phage	5.2e-32	100.0
AWR36319.1\|384489_384672_+	NinE family protein	C6ZR57	Salmonella_phage	5.7e-29	100.0
AWR36320.1\|384668_384839_+	protein ninF	A0A1R3Y5V0	Salmonella_virus	2.5e-26	100.0
AWR36321.1\|384831_385443_+	recombination protein NinG	A3EYW8	Salmonella_phage	9.3e-100	100.0
AWR36322.1\|385439_385664_+	protein ninY	A0A1R3Y5U5	Salmonella_virus	1.3e-38	100.0
AWR36323.1\|385660_385864_+	protein ninH	A0A1R3Y5V4	Salmonella_virus	1.6e-32	100.0
AWR36324.1\|385844_386024_+	hypothetical protein	E7C9S6	Salmonella_phage	1.3e-22	94.9
AWR36325.1\|386020_386539_+	antiterminator	A0A1R3Y5U9	Salmonella_virus	2.0e-95	100.0
AWR36326.1\|387003_387207_+	hypothetical protein	I6R0S9	Salmonella_phage	1.1e-33	100.0
AWR40522.1\|387184_387682_+	lysozyme	A0A1R3Y5W5	Salmonella_virus	1.7e-91	100.0
AWR36327.1\|387770_388208_+\|lysis	lysis protein	A0A1R3Y6Z8	Salmonella_virus	1.8e-73	100.0
AWR36328.1\|388357_388963_+	Rha family transcriptional regulator	A0A1R3Y613	Salmonella_virus	1.4e-111	100.0
AWR36329.1\|389224_389539_-	hypothetical protein	A0A1R3Y5U0	Salmonella_virus	1.0e-49	100.0
AWR36330.1\|389792_390035_+	hypothetical protein	A0A1R3Y5V5	Salmonella_virus	1.7e-36	100.0
AWR36331.1\|390036_390216_+	hypothetical protein	A0A2H4A350	Salmonella_phage	1.1e-24	100.0
AWR36332.1\|390239_390728_+	DNA-packaging protein	A3EYX3	Salmonella_phage	2.9e-88	100.0
AWR36333.1\|390705_392205_+\|terminase	terminase	A0A1R3Y5N2	Salmonella_virus	2.8e-307	100.0
AWR36334.1\|392204_394382_+\|portal	portal protein	A0A1R3Y5N6	Salmonella_virus	0.0e+00	100.0
AWR36335.1\|394395_395307_+	scaffolding protein	A0A1R3Y5R6	Salmonella_virus	4.9e-161	100.0
AWR36336.1\|395306_396599_+\|coat	coat protein	A0A1R3Y5Q0	Salmonella_virus	1.1e-243	100.0
AWR36337.1\|396639_397200_+	hypothetical protein	A0A1R3Y5P2	Salmonella_virus	1.1e-102	100.0
AWR36338.1\|397183_397684_+	hypothetical protein	Q76H19	Enterobacteria_phage	4.2e-90	100.0
AWR36339.1\|397643_399062_+	hypothetical protein	E7C9U1	Salmonella_phage	4.6e-275	99.4
AWR36340.1\|399065_399767_+\|tail	phage tail protein	A0A1R3Y5X6	Salmonella_virus	1.2e-74	100.0
AWR36341.1\|399766_400222_+	hypothetical protein	A0A1R3Y5P3	Salmonella_virus	1.8e-87	100.0
AWR36342.1\|400224_400914_+	DNA transfer protein	A0A1R3Y5P8	Salmonella_virus	4.0e-91	100.0
AWR40523.1\|400956_402294_+	DNA transfer protein	A0A1R3Y5Q4	Salmonella_virus	1.0e-244	100.0
AWR36343.1\|402293_404261_+	DNA transfer protein	A0A1R3Y5Q1	Salmonella_virus	0.0e+00	100.0
AWR36344.1\|404416_406402_+	endorhamnosidase	A0A1R3Y5S2	Salmonella_virus	0.0e+00	100.0
AWR36345.1\|406441_408364_-	acyltransferase	A0A1R3Y5Q6	Salmonella_virus	0.0e+00	100.0
417625:417641	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1015292 : 1022306

Dickeya_phage(16.67%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR36899.1\|1015292_1016411_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9
AWR36900.1\|1016407_1018354_+	macrolide ABC transporter permease/ATP-binding protein MacB	G9BWD6	Planktothrix_phage	2.0e-39	43.1
AWR36901.1\|1018334_1018529_+	hypothetical protein	NA	NA	NA	NA
AWR36902.1\|1018483_1018705_-	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
AWR36903.1\|1019028_1019349_+\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
AWR36904.1\|1019379_1021656_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
AWR36905.1\|1021708_1021891_+	hypothetical protein	NA	NA	NA	NA
AWR36906.1\|1021847_1022306_+\|transposase	IS200/IS605 family transposase IS200F	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5

DBSCAN-SWA_3

1074117 : 1153275

Salmonella_phage(45.28%)

transposase,protease,holin,integrase,tail,portal,lysis,tRNA

attL 1077026:1077045|attR 1145136:1145155

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR36945.1\|1074117_1074921_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
AWR36946.1\|1074913_1076236_+	chromosome partition protein MukF	NA	NA	NA	NA
AWR36947.1\|1076216_1076921_+	condensin subunit E	NA	NA	NA	NA
AWR36948.1\|1076920_1081387_+	chromosome partition protein MukB	NA	NA	NA	NA
1077026:1077045	attL	NA	NA	NA	NA
AWR36949.1\|1081731_1083573_+	L,D-transpeptidase	NA	NA	NA	NA
AWR36950.1\|1083832_1084381_+	outer membrane protein	A0A0K1LKR7	Rhodobacter_phage	1.2e-05	33.7
AWR36951.1\|1084408_1085056_+	MBL fold hydrolase	NA	NA	NA	NA
AWR36952.1\|1085117_1086308_-	aspartate aminotransferase	NA	NA	NA	NA
AWR36953.1\|1086492_1087584_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	2.2e-99	51.7
AWR36954.1\|1088190_1089591_-\|tRNA	asparagine--tRNA ligase	A0A167RLM0	Powai_lake_megavirus	4.5e-81	35.1
AWR36955.1\|1089791_1090253_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AWR36956.1\|1090249_1090483_-	hypothetical protein	NA	NA	NA	NA
AWR36957.1\|1090569_1091784_+	PLP-dependent lyase/thiolase	NA	NA	NA	NA
AWR36958.1\|1092028_1093465_+	sodium:alanine symporter family protein	NA	NA	NA	NA
AWR36959.1\|1093542_1094745_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
AWR36960.1\|1094939_1096280_-\|integrase	integrase	S4TSP2	Salmonella_phage	3.6e-261	99.6
AWR36961.1\|1096276_1096525_-	excisionase	S4TND0	Salmonella_phage	4.7e-42	100.0
AWR36962.1\|1096565_1096805_-	hypothetical protein	S4TR31	Salmonella_phage	2.0e-37	100.0
AWR36963.1\|1096847_1098005_-	enterohemolysin	S4TTE8	Salmonella_phage	1.6e-217	100.0
AWR36964.1\|1097967_1100853_-	exodeoxyribonuclease	S4TNL0	Salmonella_phage	0.0e+00	97.2
AWR36965.1\|1100979_1101279_-	DNA breaking-rejoining protein	S4TSN6	Salmonella_phage	8.1e-49	84.5
AWR36966.1\|1101300_1101459_-	hypothetical protein	H6WRX3	Salmonella_phage	1.2e-22	98.1
AWR36967.1\|1101451_1101712_-	hypothetical protein	NA	NA	NA	NA
AWR36968.1\|1101761_1102172_-	transcriptional regulator	A0A1B5FPF4	Escherichia_phage	8.1e-07	42.4
AWR36969.1\|1102291_1102531_+	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	8.3e-12	47.2
AWR36970.1\|1102496_1102871_+	hypothetical protein	S4TTD7	Salmonella_phage	3.9e-64	99.2
AWR36971.1\|1103880_1104630_+	DNA replication protein DnaC	S4TNF5	Salmonella_phage	3.6e-138	99.6
AWR36972.1\|1104640_1104988_+	DNA-binding protein	H6WRX9	Salmonella_phage	5.4e-52	89.6
AWR36973.1\|1104984_1105296_+	hypothetical protein	A0A220NQV2	Salmonella_phage	7.2e-32	97.2
AWR36974.1\|1105373_1105664_+	hypothetical protein	NA	NA	NA	NA
AWR36975.1\|1105955_1106189_+	DinI family protein	H6WRY5	Salmonella_phage	2.1e-36	98.7
AWR36976.1\|1106300_1106522_+	hypothetical protein	NA	NA	NA	NA
AWR36977.1\|1106604_1107207_+	hypothetical protein	S4TTI0	Salmonella_phage	8.3e-109	98.5
AWR36978.1\|1107206_1107413_+	hypothetical protein	S4TNP0	Salmonella_phage	3.5e-35	100.0
AWR36979.1\|1107415_1108027_+	protein NinG	A0A0M4RU10	Salmonella_phage	6.9e-79	91.6
AWR36980.1\|1108023_1108170_+	hypothetical protein	A0A0M5M7B2	Salmonella_phage	4.3e-19	97.9
AWR36981.1\|1108159_1108957_+	antitermination protein	A0A0M4S661	Salmonella_phage	2.3e-151	99.6
AWR40555.1\|1109121_1109340_+	hypothetical protein	NA	NA	NA	NA
AWR36982.1\|1109513_1109639_+	hypothetical protein	NA	NA	NA	NA
AWR36983.1\|1109774_1110224_-	hypothetical protein	NA	NA	NA	NA
AWR36984.1\|1110584_1111271_-	PipA/GogA/GtgA family type III secretion system effector	Q9MBM0	Phage_Gifsy-2	2.1e-132	100.0
AWR40556.1\|1111546_1111876_+\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
AWR36985.1\|1111859_1112312_+	muraminidase	A0A0M4R365	Salmonella_phage	5.1e-79	96.6
AWR40557.1\|1112329_1112809_+\|lysis	lysis protein	Q56118	Enterobacteria_phage	1.4e-55	77.0
AWR36986.1\|1113016_1113550_+	DNA breaking-rejoining protein	A0A291AWV8	Escherichia_phage	1.3e-33	48.1
AWR36987.1\|1113506_1115645_+	DNA packaging protein	A5LH27	Enterobacteria_phage	3.4e-290	72.6
AWR36988.1\|1115641_1115848_+	primosomal replication protein PriB/PriC domain protein	A0A1W6JT66	Pseudomonas_phage	2.9e-05	53.3
AWR40558.1\|1115874_1117392_+\|portal	phage portal protein	A0A291AWU2	Escherichia_phage	1.5e-175	65.1
AWR40559.1\|1117315_1119397_+	peptidase S14	A0A291AWT6	Escherichia_phage	4.8e-265	69.5
AWR36989.1\|1119487_1119811_+	recombinase RecA	K7PLV6	Enterobacteria_phage	7.7e-29	61.3
AWR36990.1\|1119803_1120103_+	ATP-binding protein	K7PH43	Enterobacteria_phage	4.5e-15	45.1
AWR36991.1\|1120083_1120650_+\|tail	phage tail protein	Q9G063	Phage_Gifsy-2	9.5e-14	97.8
AWR36992.1\|1120646_1121048_+\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	2.6e-42	60.2
AWR36993.1\|1121059_1121809_+\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	3.7e-90	68.6
AWR36994.1\|1121854_1122253_+\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	6.6e-30	56.1
AWR36995.1\|1122249_1122579_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	5.0e-23	50.9
AWR40560.1\|1122658_1125646_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	8.2e-266	62.1
AWR36996.1\|1125642_1125975_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	3.3e-35	61.5
AWR36997.1\|1126073_1126571_+	Ail/OmpX	A0A1B0VBR9	Salmonella_phage	1.4e-16	36.6
AWR36998.1\|1126687_1127221_-	superoxide dismutase [Cu-Zn] SodC1	Q9MC02	Salmonella_phage	1.8e-46	54.0
AWR36999.1\|1127310_1128006_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.3e-89	66.7
AWR37000.1\|1128015_1128753_+\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	1.6e-114	76.1
AWR37001.1\|1128650_1129355_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	9.2e-67	62.6
AWR37002.1\|1129426_1129618_+	hypothetical protein	S5MW25	Escherichia_phage	1.6e-18	68.9
AWR37003.1\|1129651_1130356_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWR37004.1\|1131105_1131687_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.7e-95	89.5
AWR37005.1\|1133084_1133789_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWR37006.1\|1134606_1135233_-	DUF159 family protein	A0A2H4J5W2	uncultured_Caudovirales_phage	1.4e-66	63.2
AWR37007.1\|1135301_1135601_-	hypothetical protein	NA	NA	NA	NA
AWR37008.1\|1135585_1136272_-	virulence protein	NA	NA	NA	NA
AWR37009.1\|1136542_1136734_-	DNA-damage-inducible protein I	S4TNM0	Salmonella_phage	6.2e-26	95.2
AWR37010.1\|1137160_1139773_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	6.3e-20	22.6
AWR37011.1\|1139980_1140991_+	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA
AWR37012.1\|1141156_1141699_+	cell division protein ZapC	NA	NA	NA	NA
AWR37013.1\|1141695_1142805_-	hypothetical protein	NA	NA	NA	NA
AWR37014.1\|1142903_1145012_+	23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))- methyltransferase	NA	NA	NA	NA
AWR37015.1\|1145024_1146932_+	ABC transporter ATPase	A0A2K9L3Z8	Tupanvirus	2.4e-53	29.8
1145136:1145155	attR	NA	NA	NA	NA
AWR37016.1\|1146946_1148200_+	paraquat-inducible protein A	NA	NA	NA	NA
AWR37017.1\|1148204_1149845_+	paraquat-inducible protein B	NA	NA	NA	NA
AWR37018.1\|1149841_1150405_+	hypothetical protein	NA	NA	NA	NA
AWR37019.1\|1150660_1150828_+	ribosome modulation factor	NA	NA	NA	NA
AWR37020.1\|1150927_1151446_-	beta-hydroxydecanoyl-ACP dehydratase	NA	NA	NA	NA
AWR37021.1\|1151514_1153275_-\|protease	Lon protease	NA	NA	NA	NA

DBSCAN-SWA_4

2025567 : 2104909

107

Salmonella_phage(85.07%)

transposase,terminase,capsid,holin,integrase,tail,plate,portal,lysis,head

attL 2032105:2032120|attR 2106532:2106547

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR37893.1\|2025567_2026026_-\|transposase	IS200/IS605 family transposase IS200F	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5
AWR40595.1\|2025982_2026165_-	hypothetical protein	NA	NA	NA	NA
AWR37894.1\|2026206_2027412_-	lysine-N-methylase	NA	NA	NA	NA
AWR37895.1\|2027490_2028978_-	flagellin FliC	NA	NA	NA	NA
AWR37896.1\|2029234_2030638_+	flagellar hook-associated protein 2	NA	NA	NA	NA
AWR37897.1\|2030652_2031060_+	flagellar protein FliS	NA	NA	NA	NA
AWR37898.1\|2031059_2031428_+	flagellar protein FliT	NA	NA	NA	NA
AWR37899.1\|2031499_2032984_+	alpha-amylase	NA	NA	NA	NA
2032105:2032120	attL	NA	NA	NA	NA
AWR37900.1\|2033023_2033437_-	hypothetical protein	NA	NA	NA	NA
AWR37901.1\|2033562_2034828_+	hypothetical protein	NA	NA	NA	NA
AWR37902.1\|2034824_2035058_+	SirA-like protein	NA	NA	NA	NA
AWR37903.1\|2035322_2035709_+	hypothetical protein	NA	NA	NA	NA
AWR37904.1\|2035828_2036143_-	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
AWR37905.1\|2036359_2038042_+	flagellar M-ring protein	NA	NA	NA	NA
AWR37906.1\|2038034_2039030_+	flagellar motor switch protein FliG	NA	NA	NA	NA
AWR37907.1\|2039022_2039730_+	flagellar assembly protein FliH	NA	NA	NA	NA
AWR37908.1\|2039729_2041100_+	flagellum-specific ATP synthase	NA	NA	NA	NA
AWR37909.1\|2041121_2041565_+	flagellar protein FliJ	NA	NA	NA	NA
AWR37910.1\|2041561_2042779_+	flagellar hook-length control protein FliK	NA	NA	NA	NA
AWR37911.1\|2042883_2043351_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA
AWR37912.1\|2043355_2044360_+	flagellar motor switch protein FliM	NA	NA	NA	NA
AWR37913.1\|2044356_2044770_+	flagellar motor switch protein FliN	NA	NA	NA	NA
AWR37914.1\|2044769_2045147_+	flagellar protein FliO	NA	NA	NA	NA
AWR37915.1\|2045146_2045884_+	flagellar biosynthetic protein FliP	NA	NA	NA	NA
AWR37916.1\|2045893_2046163_+	flagellar biosynthetic protein FliQ	NA	NA	NA	NA
AWR37917.1\|2046171_2046966_+	flagellar biosynthesis protein FliR	NA	NA	NA	NA
AWR37918.1\|2047247_2047871_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AWR37919.1\|2047909_2048158_-	DsrB protein	NA	NA	NA	NA
AWR37920.1\|2048232_2048460_+	hypothetical protein	NA	NA	NA	NA
AWR37921.1\|2048769_2049585_+	mannosyl-3-phosphoglycerate phosphatase-related protein	NA	NA	NA	NA
AWR37922.1\|2049563_2051276_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.2e-19	37.4
AWR37923.1\|2051440_2051686_-	DUF2158 domain-containing protein	NA	NA	NA	NA
AWR37924.1\|2051702_2052620_-	hypothetical protein	NA	NA	NA	NA
AWR37925.1\|2052789_2053710_+	amino acid exporter	NA	NA	NA	NA
AWR37926.1\|2053698_2054169_-	very short patch repair endonuclease	E5E3X5	Burkholderia_phage	1.2e-30	46.9
AWR37927.1\|2054149_2055580_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4
AWR37928.1\|2055653_2056349_-	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
AWR37929.1\|2056440_2056740_-	hypothetical protein	NA	NA	NA	NA
AWR37930.1\|2057390_2058596_+	porin	Q1MVN1	Enterobacteria_phage	2.8e-108	54.9
AWR40596.1\|2058856_2059045_-	cold-shock protein	NA	NA	NA	NA
AWR37931.1\|2059055_2059268_-	cold-shock protein CspJ	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
AWR37932.1\|2059722_2060991_-	protein UmuC	I6RSM4	Salmonella_phage	4.2e-227	92.2
AWR37933.1\|2060993_2061413_-	protein UmuD	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
AWR37934.1\|2061539_2061701_-	hypothetical protein	NA	NA	NA	NA
AWR37935.1\|2061678_2061921_-	hypothetical protein	NA	NA	NA	NA
AWR37936.1\|2062331_2062553_-	DNA-binding protein	Q8HAB1	Salmonella_phage	1.2e-36	100.0
AWR37937.1\|2062765_2063773_+	non-LEE encoded effector protein NleB	Q8HAB2	Salmonella_phage	7.9e-197	100.0
AWR37938.1\|2064057_2064657_-\|tail	tail fiber assembly protein	Q8HAB3	Salmonella_phage	5.9e-107	100.0
AWR37939.1\|2064626_2066189_-\|tail	phage tail protein	Q8HAB4	Salmonella_phage	2.6e-287	100.0
AWR37940.1\|2066175_2066763_-\|tail	phage tail protein	A0A192Y5V3	Salmonella_phage	2.9e-114	100.0
AWR37941.1\|2066765_2067287_-\|tail	phage tail protein	Q8HAB6	Salmonella_phage	2.9e-94	100.0
AWR37942.1\|2067321_2067867_-\|head	head assembly protein	Q8HAB7	Salmonella_phage	9.2e-99	100.0
AWR37943.1\|2067838_2068252_-	hypothetical protein	Q8HAB8	Salmonella_phage	1.1e-75	100.0
AWR37944.1\|2068256_2068790_-\|plate	baseplate assembly protein	Q8HAB9	Salmonella_phage	1.4e-96	100.0
AWR37945.1\|2068789_2069848_-\|plate	baseplate protein	Q8HAC0	Salmonella_phage	1.3e-202	100.0
AWR37946.1\|2069844_2071185_-	DNA circularization protein	A0A192Y5U9	Salmonella_phage	5.7e-251	99.6
AWR37947.1\|2071218_2073147_-\|tail	phage tail tape measure protein	Q8HAC2	Salmonella_phage	0.0e+00	99.8
AWR37948.1\|2073231_2073558_-\|tail	phage tail assembly protein	Q8HAC3	Salmonella_phage	2.3e-52	99.1
AWR37949.1\|2073554_2073911_-\|tail	phage tail protein	A0A192Y8K0	Salmonella_phage	2.6e-62	100.0
AWR37950.1\|2073910_2075407_-\|tail	phage tail protein	Q8HAC5	Salmonella_phage	2.7e-278	100.0
AWR37951.1\|2075396_2075561_-	DUF2635 domain-containing protein	Q8HAC6	Salmonella_phage	1.0e-24	100.0
AWR37952.1\|2075564_2076125_-	hypothetical protein	Q8HAC7	Salmonella_phage	3.0e-105	100.0
AWR37953.1\|2076121_2076634_-	hypothetical protein	Q8HAC8	Salmonella_phage	4.6e-92	100.0
AWR37954.1\|2076605_2077010_-\|head,tail	head-tail adaptor protein	Q8HAC9	Salmonella_phage	1.4e-72	100.0
AWR37955.1\|2077006_2077330_-\|head,tail	phage gp6-like head-tail connector protein	A0A192Y8J4	Salmonella_phage	6.3e-55	100.0
AWR37956.1\|2077332_2077533_-	hypothetical protein	Q8HAD1	Salmonella_phage	1.4e-28	100.0
AWR37957.1\|2077583_2078789_-\|capsid	phage major capsid protein	Q8HAD2	Salmonella_phage	1.6e-223	100.0
AWR37958.1\|2078803_2079490_-	primosome assembly protein PriA	Q8HAD3	Salmonella_phage	6.5e-126	100.0
AWR37959.1\|2079431_2080673_-\|portal	phage portal protein	Q8HAD4	Salmonella_phage	2.0e-242	99.8
AWR37960.1\|2080672_2080855_-	hypothetical protein	Q8HAD5	Salmonella_phage	1.0e-25	100.0
AWR37961.1\|2080866_2082600_-\|terminase	terminase	Q8HAD6	Salmonella_phage	0.0e+00	100.0
AWR37962.1\|2082596_2083100_-\|terminase	terminase	Q8HAD7	Salmonella_phage	3.6e-89	100.0
AWR37963.1\|2083216_2083567_-	HNH endonuclease	Q8HA82	Salmonella_phage	2.5e-65	100.0
AWR37964.1\|2083627_2083930_-	hypothetical protein	Q8HA83	Salmonella_phage	3.6e-52	100.0
AWR37965.1\|2084149_2084569_-	hypothetical protein	Q8HA84	Salmonella_phage	4.8e-71	100.0
AWR37966.1\|2084781_2085267_-\|lysis	lysis protein	Q8HA85	Salmonella_phage	5.9e-81	100.0
AWR37967.1\|2085263_2085878_-	endolysin	Q8HA86	Salmonella_phage	9.3e-116	100.0
AWR37968.1\|2085880_2086225_-\|holin	phage holin, lambda family	Q8HA87	Salmonella_phage	5.3e-44	100.0
AWR37969.1\|2086386_2086821_+	hypothetical protein	NA	NA	NA	NA
AWR40597.1\|2086750_2087008_-	hypothetical protein	Q8HA88	Salmonella_phage	5.2e-44	100.0
AWR37970.1\|2087140_2087764_-	hypothetical protein	Q8HA89	Salmonella_phage	9.1e-119	100.0
AWR40598.1\|2087774_2088764_-	hypothetical protein	A0A1C9IHZ5	Salmonella_phage	4.9e-191	97.6
AWR37971.1\|2088771_2089677_-	DNA-binding protein	Q8HA92	Salmonella_phage	3.9e-163	100.0
AWR37972.1\|2089648_2090038_-	hypothetical protein	Q8HA93	Salmonella_phage	3.7e-70	100.0
AWR37973.1\|2090034_2090928_-	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	7.6e-175	100.0
AWR37974.1\|2090927_2091452_-	hypothetical protein	Q8HA95	Salmonella_phage	2.4e-96	100.0
AWR37975.1\|2091411_2092230_-	helix-turn-helix domain-containing protein	Q8HA96	Salmonella_phage	2.8e-136	100.0
AWR37976.1\|2092226_2092451_-	hypothetical protein	A0A1C9II64	Salmonella_phage	3.3e-39	100.0
AWR37977.1\|2092447_2093605_-	peptidase	Q8HA97	Salmonella_phage	4.2e-218	100.0
AWR37978.1\|2093601_2094156_-	hypothetical protein	A0A1C9II13	Salmonella_phage	6.9e-102	100.0
AWR37979.1\|2094184_2094409_-	transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.9e-34	100.0
AWR37980.1\|2094347_2094533_-	hypothetical protein	NA	NA	NA	NA
AWR37981.1\|2094506_2095202_+	transcriptional regulator	Q8HAA0	Salmonella_phage	3.2e-128	100.0
AWR37982.1\|2095733_2095919_-	hypothetical protein	NA	NA	NA	NA
AWR37983.1\|2096016_2096388_+	hypothetical protein	Q8HAA1	Salmonella_phage	1.1e-63	100.0
AWR37984.1\|2096445_2097273_+	hypothetical protein	Q8HAA2	Salmonella_phage	7.5e-153	100.0
AWR37985.1\|2097409_2097949_+	hypothetical protein	A0A192Y8M4	Salmonella_phage	2.6e-98	100.0
AWR37986.1\|2098019_2098250_+	hypothetical protein	Q8HAA4	Salmonella_phage	2.0e-34	100.0
AWR37987.1\|2098246_2098762_+	hypothetical protein	Q8HAA5	Salmonella_phage	7.4e-98	100.0
AWR37988.1\|2098758_2099376_+	hypothetical protein	Q8HAA6	Salmonella_phage	2.6e-113	100.0
AWR37989.1\|2099372_2100206_+	hypothetical protein	Q8HAA7	Salmonella_phage	4.7e-163	100.0
AWR37990.1\|2100209_2100779_+	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	7.1e-110	100.0
AWR37991.1\|2100803_2101046_+	hypothetical protein	Q8HAA9	Salmonella_phage	9.5e-40	100.0
AWR37992.1\|2101047_2102037_+\|integrase	integrase	A0A192Y7M7	Salmonella_phage	8.6e-196	100.0
AWR37993.1\|2102328_2103126_+	protein MtfA	NA	NA	NA	NA
AWR37994.1\|2103497_2103788_+\|integrase	integrase	H2BDA3	Pseudomonas_phage	3.0e-08	49.1
AWR37995.1\|2104435_2104909_+	peptidase	A0A0F6TJ61	Escherichia_coli_O157_typing_phage	7.1e-39	77.6
2106532:2106547	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2190903 : 2201409

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR38082.1\|2190903_2192217_-	LPS biosynthesis protein	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1
AWR38083.1\|2192243_2193323_-	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	6.6e-16	24.1
AWR38084.1\|2193327_2194101_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
AWR38085.1\|2194097_2195090_-	protein RfbI	NA	NA	NA	NA
AWR38086.1\|2195095_2195647_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.2e-52	58.0
AWR38087.1\|2195647_2196526_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	9.3e-109	65.5
AWR38088.1\|2196573_2197473_-	NAD(P)-dependent oxidoreductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
AWR38089.1\|2197472_2198558_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-102	53.9
AWR38090.1\|2198934_2199828_-	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	4.8e-44	42.2
AWR38091.1\|2200005_2201409_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	27.1

DBSCAN-SWA_6

2269717 : 2278888

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR38147.1\|2269717_2271751_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6
AWR38148.1\|2271991_2272450_+	hypothetical protein	Q9EYF5	Enterobacteria_phage	3.2e-52	71.9
AWR38149.1\|2272621_2273152_+	hypothetical protein	NA	NA	NA	NA
AWR38150.1\|2273208_2273676_-	hypothetical protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
AWR38151.1\|2273722_2274442_-	DNA-binding response regulator	NA	NA	NA	NA
AWR40603.1\|2274438_2276124_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.2e-279	91.1
AWR38152.1\|2276346_2277078_+	transcriptional regulator	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
AWR38153.1\|2277137_2277245_+	hypothetical protein	NA	NA	NA	NA
AWR38154.1\|2277225_2277957_-	osmoprotectant uptake system permease	NA	NA	NA	NA
AWR38155.1\|2277940_2278888_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	31.2

DBSCAN-SWA_7

2354778 : 2364018

Salmonella_phage(37.5%)

holin,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR38226.1\|2354778_2355222_-\|tail	tail assembly chaperone	A0A0F7LDZ0	Escherichia_phage	1.4e-28	43.9
AWR38227.1\|2355599_2356127_-\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	3.1e-11	31.3
AWR38228.1\|2356129_2357371_-	hypothetical protein	Q8HAB4	Salmonella_phage	1.0e-52	95.3
AWR38229.1\|2357431_2357950_-	peptidase	Q8SBH9	Shigella_phage	5.2e-75	88.0
AWR38230.1\|2357963_2358293_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	3.9e-36	94.6
AWR38231.1\|2359950_2360319_-	antitermination protein Q	A5LH77	Enterobacteria_phage	7.4e-52	81.7
AWR40606.1\|2360333_2361323_-	hypothetical protein	A0A1C9IHZ5	Salmonella_phage	6.0e-189	97.3
AWR38232.1\|2361651_2364018_-	E3 ubiquitin--protein ligase	Q9MBL9	Phage_Gifsy-2	3.2e-71	88.0

DBSCAN-SWA_8

2705064 : 2806558

109

Salmonella_phage(36.07%)

transposase,terminase,capsid,holin,integrase,tail,portal,lysis,head,tRNA

attL 2731208:2731223|attR 2801647:2801662

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR38539.1\|2705064_2705796_-\|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	NA	NA	NA	NA
AWR38540.1\|2705914_2706718_+	inositol monophosphatase	NA	NA	NA	NA
AWR38541.1\|2706862_2707741_+	alpha/beta hydrolase	A0A1C9C5K3	Heterosigma_akashiwo_virus	3.5e-15	24.7
AWR38542.1\|2707922_2708966_+	sulfite reductase subunit alpha	NA	NA	NA	NA
AWR38543.1\|2708969_2709788_+	anaerobic sulfite reductase subunit B	NA	NA	NA	NA
AWR38544.1\|2709798_2710812_+	sulfite reductase subunit C	NA	NA	NA	NA
AWR38545.1\|2710812_2711799_-	nickel transporter	NA	NA	NA	NA
AWR40615.1\|2711789_2712428_-	hypothetical protein	NA	NA	NA	NA
AWR38546.1\|2712553_2713831_+	stationary phase inducible protein CsiE	NA	NA	NA	NA
AWR38547.1\|2713825_2714965_-	3-phenylpropionic acid transporter	NA	NA	NA	NA
AWR38548.1\|2715160_2716414_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	1.3e-100	53.0
AWR38549.1\|2716738_2717929_+	flavohemoprotein	NA	NA	NA	NA
AWR38550.1\|2718110_2719655_+	transcriptional regulator CadC	NA	NA	NA	NA
AWR38551.1\|2720015_2721347_+	lysine:cadaverine antiporter	NA	NA	NA	NA
AWR38552.1\|2721429_2723574_+	lysine decarboxylase inducible	NA	NA	NA	NA
AWR38553.1\|2723629_2725090_+	MFS transporter	A0A0P0IY73	Acinetobacter_phage	1.7e-46	28.8
AWR38554.1\|2725138_2725477_-	nitrogen regulatory protein P-II 1	NA	NA	NA	NA
AWR38555.1\|2725553_2726891_-	transcriptional regulator	W8CYM9	Bacillus_phage	1.8e-10	29.2
AWR38556.1\|2726887_2727652_-	hypothetical protein	NA	NA	NA	NA
AWR38557.1\|2727653_2729039_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	1.9e-15	26.1
AWR38558.1\|2729733_2733621_-	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	1.4e-127	57.6
2731208:2731223	attL	NA	NA	NA	NA
AWR38559.1\|2733642_2733876_+	hypothetical protein	NA	NA	NA	NA
AWR38560.1\|2733876_2735421_+	lytic transglycosylase F	NA	NA	NA	NA
AWR38561.1\|2735471_2736023_-\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA
AWR38562.1\|2736047_2736683_-	phosphatidylglycerophosphatase C	NA	NA	NA	NA
AWR38563.1\|2736686_2738048_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
AWR38564.1\|2738058_2738952_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
AWR38565.1\|2739067_2739916_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AWR38566.1\|2739954_2740872_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
AWR38567.1\|2740893_2742090_-	MFS transporter	NA	NA	NA	NA
AWR38568.1\|2742205_2743132_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	3.0e-09	24.4
AWR38569.1\|2743169_2743430_+	ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	1.4e-17	52.3
AWR38570.1\|2743541_2743922_-	holo-ACP synthase	NA	NA	NA	NA
AWR38571.1\|2743921_2744653_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
AWR38572.1\|2744664_2745393_-	DNA repair protein RecO	NA	NA	NA	NA
AWR38573.1\|2745404_2746310_-	GTPase Era	NA	NA	NA	NA
AWR40616.1\|2746306_2746987_-	ribonuclease 3	A0A2K9L5P0	Tupanvirus	7.4e-21	31.8
AWR38574.1\|2747260_2748235_-	S26 family signal peptidase	NA	NA	NA	NA
AWR38575.1\|2748251_2750051_-	elongation factor 4	E4ZFJ7	Streptococcus_phage	7.2e-23	24.9
AWR38576.1\|2750455_2751949_+	type III secretion system protein	Q9MBM1	Phage_Gifsy-1	3.4e-260	100.0
AWR38577.1\|2752457_2752595_+	hypothetical protein	NA	NA	NA	NA
AWR38578.1\|2752841_2753387_+\|transposase	transposase	NA	NA	NA	NA
AWR38579.1\|2754179_2754392_-	hypothetical protein	S4TTF2	Salmonella_phage	3.8e-08	90.6
AWR38580.1\|2754498_2754726_+	phage virulence factor	NA	NA	NA	NA
AWR38581.1\|2754822_2755401_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	3.6e-93	88.9
AWR38582.1\|2755390_2756215_-\|tail	phage tail protein	A0A0M4QWS3	Salmonella_phage	1.2e-145	92.0
AWR38583.1\|2756211_2758584_-\|tail	phage tail protein	A0A0K2FIZ6	Escherichia_phage	4.8e-91	65.6
AWR38584.1\|2758637_2758880_-	hypothetical protein	NA	NA	NA	NA
AWR38585.1\|2758918_2762281_-	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	79.6
AWR38586.1\|2762342_2762990_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.1e-89	77.7
AWR38587.1\|2762887_2763625_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.2e-129	85.0
AWR38588.1\|2763631_2764330_-\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	5.5e-104	76.3
AWR38589.1\|2764339_2764669_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.3e-42	70.4
AWR38590.1\|2764671_2767767_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	1.7e-274	62.3
AWR38591.1\|2767738_2768077_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-31	62.4
AWR38592.1\|2768073_2768469_-\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.3e-30	56.5
AWR38593.1\|2768519_2769266_-\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	1.9e-99	76.9
AWR38594.1\|2769273_2769675_-\|tail	phage tail protein	Q9G0F3	Phage_Gifsy-1	8.1e-52	100.0
AWR38595.1\|2769663_2770914_+\|transposase	transposase	Q9G0F2	Phage_Gifsy-1	7.8e-218	100.0
AWR38596.1\|2770962_2771541_-\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.7e-82	80.2
AWR38597.1\|2771568_2771952_-\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	9.2e-29	55.6
AWR38598.1\|2771962_2772322_-	DNA packaging protein	NA	NA	NA	NA
AWR38599.1\|2772379_2773408_-\|capsid	major capsid protein E	C6ZCY2	Enterobacteria_phage	1.9e-113	60.8
AWR38600.1\|2773462_2773810_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	9.2e-20	52.7
AWR38601.1\|2773822_2775319_-	scaffolding protein	A0A0K2FI53	Enterobacteria_phage	8.1e-97	52.2
AWR38602.1\|2775308_2776889_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	9.6e-189	62.8
AWR38603.1\|2776885_2777089_-\|tail	phage tail protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
AWR38604.1\|2777072_2779004_-\|terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	6.3e-259	65.7
AWR38605.1\|2778975_2779521_-\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.5e-56	80.6
AWR38606.1\|2779807_2780209_+	inhibitor of g-type lysozyme	NA	NA	NA	NA
AWR40617.1\|2780444_2780897_-\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	2.9e-66	92.7
AWR38607.1\|2780914_2781367_-	lysozyme	A0A0M4R365	Salmonella_phage	5.1e-79	97.3
AWR40618.1\|2781350_2781680_-\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
AWR38608.1\|2781955_2782642_+	PipA/GogA/GtgA family type III secretion system effector	Q9MBM2	Phage_Gifsy-1	1.4e-131	99.1
AWR38609.1\|2782856_2783045_-	hypothetical protein	NA	NA	NA	NA
AWR38610.1\|2783551_2784115_-	hypothetical protein	A0A0P0ZC44	Stx2-converting_phage	7.6e-56	92.2
AWR38611.1\|2784205_2784391_-	hypothetical protein	NA	NA	NA	NA
AWR38612.1\|2784387_2785065_-	antiterminator	I6PDF8	Cronobacter_phage	7.7e-63	54.0
AWR38613.1\|2785061_2785202_-	hypothetical protein	A0A0M5M7B2	Salmonella_phage	7.2e-08	78.9
AWR38614.1\|2785198_2785810_-	protein NinG	A0A0M4RU10	Salmonella_phage	1.2e-91	99.0
AWR38615.1\|2785812_2786019_-	hypothetical protein	S4TNP0	Salmonella_phage	1.7e-34	97.1
AWR38616.1\|2786018_2786621_-	hypothetical protein	S4TTI0	Salmonella_phage	1.4e-108	98.5
AWR38617.1\|2786655_2786904_-	hypothetical protein	A0A0U2C0C8	Salmonella_phage	1.6e-42	100.0
AWR38618.1\|2787020_2787254_-	DinI family protein	H6WRY5	Salmonella_phage	5.6e-37	100.0
AWR38619.1\|2787496_2788129_-	hypothetical protein	NA	NA	NA	NA
AWR38620.1\|2788236_2788935_-	hypothetical protein	A0A0M4RTV1	Salmonella_phage	2.1e-63	85.7
AWR38621.1\|2788948_2789644_-	phage replication protein	G8C7U6	Escherichia_phage	2.1e-55	45.4
AWR38622.1\|2789640_2790525_-	replication protein	K7PGT1	Enterobacteria_phage	1.3e-46	47.2
AWR38623.1\|2790616_2790991_-	hypothetical protein	S4TTD7	Salmonella_phage	1.9e-63	98.4
AWR38624.1\|2790950_2791193_-	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	2.1e-23	64.1
AWR38625.1\|2791292_2791688_+	transcriptional regulator	K7PM35	Enterobacteria_phage	1.9e-37	61.4
AWR38626.1\|2791746_2792586_+	chromosome partitioning protein ParA	A0A1X9IGI7	Lactococcus_phage	1.5e-31	33.3
AWR38627.1\|2792578_2792965_+	hypothetical protein	NA	NA	NA	NA
AWR38628.1\|2792964_2793627_+	hypothetical protein	NA	NA	NA	NA
AWR38629.1\|2794083_2794242_+	hypothetical protein	H6WRX3	Salmonella_phage	9.0e-23	98.1
AWR38630.1\|2794263_2794614_+	DNA breaking-rejoining protein	S4TSN6	Salmonella_phage	1.1e-60	97.4
AWR38631.1\|2794740_2797668_+	exodeoxyribonuclease	S4TNL0	Salmonella_phage	0.0e+00	99.0
AWR38632.1\|2797630_2798788_+	enterohemolysin	S4TTE8	Salmonella_phage	3.9e-216	99.5
AWR38633.1\|2798830_2799070_+	hypothetical protein	S4TR31	Salmonella_phage	2.0e-37	100.0
AWR38634.1\|2799110_2799395_+	excisionase	H6WRW8	Salmonella_phage	3.1e-42	86.2
AWR38635.1\|2799372_2800602_-\|integrase	integrase	H6WRW7	Salmonella_phage	2.9e-233	94.4
AWR38636.1\|2800953_2801070_-	transcriptional regulator	NA	NA	NA	NA
AWR38637.1\|2801099_2801579_-	SoxR reducing system protein RseC	NA	NA	NA	NA
AWR38638.1\|2801575_2802532_-	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
2801647:2801662	attR	NA	NA	NA	NA
AWR38639.1\|2802531_2803182_-	anti-sigma-E factor RseA	NA	NA	NA	NA
AWR38640.1\|2803213_2803789_-	ECF RNA polymerase sigma-E factor	NA	NA	NA	NA
AWR38641.1\|2803949_2804129_-	hypothetical protein	NA	NA	NA	NA
AWR38642.1\|2804213_2805836_+	L-aspartate oxidase	NA	NA	NA	NA
AWR38643.1\|2805820_2806558_-\|tRNA	tRNA (adenosine(37)-N6)-methyltransferase TrmM	NA	NA	NA	NA

DBSCAN-SWA_9

3358371 : 3403477

Salmonella_phage(50.0%)

terminase,capsid,holin,integrase,plate,tail,portal,lysis,head,tRNA

attL 3398343:3398360|attR 3400053:3400070

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR39142.1\|3358371_3359613_+\|tRNA	multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase	A0A0F6YPT7	Sinorhizobium_phage	5.5e-91	47.7
AWR39143.1\|3359717_3360539_-	undecaprenyl-diphosphatase	NA	NA	NA	NA
AWR39144.1\|3360636_3360996_-	bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase	NA	NA	NA	NA
AWR39145.1\|3361102_3361714_+	acyl-phosphate--glycerol-3-phosphate O-acyltransferase	NA	NA	NA	NA
AWR40644.1\|3361791_3362061_+	hypothetical protein	NA	NA	NA	NA
AWR39146.1\|3361964_3362978_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.8e-109	59.5
AWR39147.1\|3363205_3363421_+	30S ribosomal protein S21	NA	NA	NA	NA
AWR39148.1\|3363656_3365402_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	2.1e-72	38.4
AWR39149.1\|3365416_3367399_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	9.0e-35	33.7
AWR39150.1\|3367522_3368029_-	mismatch-specific DNA-glycosylase	NA	NA	NA	NA
AWR39151.1\|3368388_3368607_-	transcriptional regulator	A0A2I8TV89	Erwinia_phage	9.5e-39	98.6
AWR39152.1\|3368673_3369843_-	hypothetical protein	A0A0M5M5V5	Salmonella_phage	6.6e-211	97.7
AWR39153.1\|3369839_3370325_-\|tail	phage tail protein	Q6K1G5	Salmonella_virus	3.9e-85	99.4
AWR39154.1\|3370339_3372781_-\|tail	phage tail tape measure protein	S4TP64	Salmonella_phage	0.0e+00	91.6
AWR39155.1\|3372773_3372929_-\|tail	GpE family phage tail protein	Q6K1G8	Salmonella_virus	8.8e-23	98.0
AWR39156.1\|3372925_3373261_-\|tail	phage tail assembly protein	S4TTB2	Salmonella_phage	1.4e-52	100.0
AWR39157.1\|3373323_3373842_-\|tail	phage major tail tube protein	S4TNZ0	Salmonella_phage	6.5e-94	100.0
AWR39158.1\|3373857_3375045_-\|tail	phage tail protein	Q6K1H0	Salmonella_virus	2.9e-222	99.5
AWR39159.1\|3375213_3375834_-\|tail	phage tail protein	A0A1B0VCD0	Salmonella_phage	6.8e-98	86.7
AWR39160.1\|3375803_3377897_-\|tail	phage tail protein	A0A1B0VFW4	Salmonella_phage	5.8e-218	94.5
AWR39161.1\|3377907_3378438_-\|tail	phage tail protein I	S4TTA8	Salmonella_phage	9.2e-104	100.0
AWR39162.1\|3378430_3379339_-\|plate	baseplate assembly protein	S4TNY7	Salmonella_phage	2.6e-162	100.0
AWR39163.1\|3379345_3379693_-\|plate	baseplate assembly protein	S4TRW8	Salmonella_phage	1.6e-56	99.1
AWR39164.1\|3379689_3380331_-\|plate	baseplate assembly protein	Q6K1H6	Salmonella_virus	4.8e-115	100.0
AWR39165.1\|3380399_3380849_-	phage virion morphogenesis protein	A0A0M3UL83	Salmonella_phage	5.5e-73	98.7
AWR39166.1\|3380841_3381309_-\|tail	phage tail protein	S4TTA5	Salmonella_phage	1.1e-84	100.0
AWR39167.1\|3381271_3381445_-\|lysis	phage lysis protein	S4TNY4	Salmonella_phage	3.1e-24	96.5
AWR39168.1\|3381416_3381830_-	protein lysB	S4TRW3	Salmonella_phage	2.9e-44	99.3
AWR39169.1\|3381826_3382324_-	lysozyme	S4TUB1	Salmonella_phage	5.8e-92	98.8
AWR39170.1\|3382310_3382607_-\|holin	holin	S4TP56	Salmonella_phage	4.4e-47	100.0
AWR39171.1\|3382610_3382814_-\|tail	phage tail protein	A0A0M3ULF4	Salmonella_phage	3.6e-32	100.0
AWR39172.1\|3382813_3383320_-\|head	head completion/stabilization protein	S4TNY1	Salmonella_phage	3.8e-91	99.4
AWR39173.1\|3383413_3384163_-\|terminase	terminase	Q6K1I5	Salmonella_virus	6.4e-127	97.2
AWR39174.1\|3384166_3385234_-\|capsid	phage major capsid protein, P2 family	A0A0M4R4W2	Salmonella_phage	1.3e-197	99.2
AWR39175.1\|3385310_3386165_-\|capsid	capsid scaffolding protein	S4TP53	Salmonella_phage	1.2e-156	98.6
AWR39176.1\|3386330_3388100_+	oxidoreductase	S4TT96	Salmonella_phage	0.0e+00	99.0
AWR39177.1\|3388099_3389146_+\|portal	phage portal protein	S4TNX7	Salmonella_phage	4.8e-189	98.6
AWR39178.1\|3389279_3389462_-	hypothetical protein	NA	NA	NA	NA
AWR39179.1\|3389578_3390517_+	hypothetical protein	Q2P9W7	Enterobacteria_phage	9.8e-141	77.6
AWR39180.1\|3391368_3391578_-	hypothetical protein	Q6K1F0	Salmonella_virus	8.2e-32	94.2
AWR39181.1\|3391757_3392489_-	hypothetical protein	Q37850	Escherichia_phage	1.8e-129	94.7
AWR39182.1\|3392568_3393009_-	DinI family protein	A0A218M4I0	Erwinia_phage	1.8e-65	92.0
AWR39183.1\|3393125_3395369_-	replication endonuclease	A0A218M4H2	Erwinia_phage	0.0e+00	95.3
AWR39184.1\|3395359_3395641_-	hypothetical protein	A0A0P0I3U9	Klebsiella_phage	2.0e-12	52.6
AWR39185.1\|3395637_3395910_-	hypothetical protein	A0A218M4I8	Erwinia_phage	2.1e-35	78.9
AWR39186.1\|3395906_3396491_-	DNA polymerase III subunit epsilon	A0A1S6L012	Salmonella_phage	4.0e-68	67.7
AWR39187.1\|3396487_3396715_-	hypothetical protein	A0A0M4S5Q7	Salmonella_phage	2.0e-31	91.7
AWR40645.1\|3396714_3396897_-	hypothetical protein	Q6K1F6	Salmonella_virus	6.9e-19	85.0
AWR39188.1\|3397012_3397351_-	hypothetical protein	A0A218M4I7	Erwinia_phage	7.3e-54	94.6
AWR39189.1\|3397314_3397515_-	hypothetical protein	Q6K1F7	Salmonella_virus	1.2e-32	100.0
AWR39190.1\|3397522_3398032_-	hypothetical protein	A0A0M4QWN1	Salmonella_phage	6.2e-89	98.8
AWR39191.1\|3398062_3398326_-	hypothetical protein	A0A218M4I5	Erwinia_phage	8.5e-42	90.8
3398343:3398360	attL	NA	NA	NA	NA
AWR39192.1\|3398448_3399030_+	phage repressor protein CI	A0A218M4J1	Erwinia_phage	1.2e-99	93.1
AWR39193.1\|3399029_3400052_+\|integrase	integrase	A0A218M4I3	Erwinia_phage	3.5e-176	87.9
AWR39194.1\|3400268_3401036_-	siderophore-interacting protein	NA	NA	NA	NA
3400053:3400070	attR	NA	NA	NA	NA
AWR39195.1\|3401267_3401915_+	PadR family transcriptional regulator	NA	NA	NA	NA
AWR39196.1\|3401911_3403477_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.0e-12	33.9

DBSCAN-SWA_10

4441836 : 4459730

Burkholderia_phage(47.37%)

plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40123.1\|4441836_4443582_-\|tail	phage tail protein	A0A0M3ULF6	Salmonella_phage	3.2e-52	52.2
AWR40124.1\|4443584_4444217_-\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.6e-24	56.4
AWR40125.1\|4444209_4445325_-\|plate	baseplate protein	Q6QI99	Burkholderia_phage	1.8e-101	52.2
AWR40126.1\|4445315_4445675_-\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
AWR40127.1\|4445838_4447386_-	hypothetical protein	B9UDL6	Salmonella_phage	1.9e-48	29.9
AWR40128.1\|4447385_4448315_-	glycosyltransferase	S5FKN0	Shigella_phage	8.8e-150	83.8
AWR40129.1\|4448311_4448674_-	GtrA family protein	I1TED9	Salmonella_phage	1.2e-43	70.8
AWR40130.1\|4449001_4449724_-\|plate	baseplate protein	A0A067ZIM2	Vibrio_phage	3.3e-11	41.0
AWR40131.1\|4449733_4450777_-	phage protein D	Q6QIA2	Burkholderia_phage	2.5e-76	45.1
AWR40132.1\|4450764_4450974_-	hypothetical protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
AWR40133.1\|4450973_4451927_-	methyl-accepting chemotaxis protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
AWR40134.1\|4451926_4454281_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	6.9e-66	30.6
AWR40135.1\|4454377_4454506_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
AWR40136.1\|4454465_4454783_-\|tail	phage tail assembly protein	NA	NA	NA	NA
AWR40137.1\|4454834_4455359_-\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
AWR40138.1\|4455358_4456786_-\|tail	phage tail protein	A4JWK5	Burkholderia_virus	1.1e-194	70.9
AWR40139.1\|4456775_4456973_-	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
AWR40140.1\|4456969_4457425_-	hypothetical protein	NA	NA	NA	NA
AWR40141.1\|4457584_4457899_-	hypothetical protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
AWR40142.1\|4457911_4458517_-	lytic murein transglycosylase	Q5ZQZ1	Pseudomonas_phage	2.5e-60	59.9
AWR40143.1\|4458519_4458807_-	hypothetical protein	Q6QIC8	Burkholderia_phage	2.3e-16	49.1
AWR40144.1\|4459382_4459730_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP021463

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 950

Pacmanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40706.1\|434_950_+	nuclease	A0A1X6WF84	Pacmanvirus	2.1e-07	38.6

DBSCAN-SWA_2

4633 : 9902

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40714.1\|4633_6112_+	sodium-independent anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	7.3e-199	74.4
AWR40715.1\|6130_6958_+	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	4.9e-43	37.2
AWR40716.1\|7017_7443_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.6e-50	70.7
AWR40717.1\|7455_8745_-	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	9.9e-168	71.4
AWR40718.1\|8790_9111_-	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	1.7e-20	53.7
AWR40719.1\|9197_9902_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	8.8e-86	72.9

DBSCAN-SWA_3

27548 : 29226

Cronobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40735.1\|27548_27983_+	peptidase	F1C5A6	Cronobacter_phage	2.5e-22	48.8
AWR40736.1\|27966_29226_+	hypothetical protein	F1C5A5	Cronobacter_phage	1.5e-96	44.5

DBSCAN-SWA_4

52935 : 54117

Erwinia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40755.1\|52935_54117_+	S49 family peptidase	B8QTU8	Erwinia_phage	7.5e-13	29.2

DBSCAN-SWA_5

63733 : 64333

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40769.1\|63733_64333_+	hypothetical protein	A0A1V0E5L6	Salmonella_phage	1.7e-08	42.6

DBSCAN-SWA_6

69631 : 69925

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40780.1\|69631_69925_-	hypothetical protein	I7B2L9	Escherichia_phage	4.1e-05	38.6

DBSCAN-SWA_7

76323 : 76857

Edwardsiella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40790.1\|76323_76857_-	HNH endonuclease	E7EKU5	Edwardsiella_phage	6.8e-46	65.2

DBSCAN-SWA_8

86153 : 87263

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40798.1\|86153_87263_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	4.9e-30	28.3

DBSCAN-SWA_9

90303 : 91629

Erysipelothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40802.1\|90303_91629_+	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	6.5e-114	48.1

DBSCAN-SWA_10

99650 : 111051

Shigella_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40809.1\|99650_100418_+	ferric citrate ABC transporter ATP-binding protein FecE	G3M9Y6	Bacillus_virus	9.8e-14	25.2
AWR41048.1\|100516_100810_+\|transposase	transposase	A0A0P0ZDM8	Stx2-converting_phage	4.7e-49	95.9
AWR40810.1\|101140_101419_-	EAL domain-containing protein	NA	NA	NA	NA
AWR40811.1\|101765_102848_+	lac repressor	C6ZCU4	Enterobacteria_phage	6.5e-189	98.1
AWR40812.1\|102969_106044_+	beta-D-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	96.8
AWR40813.1\|106095_107349_+	MFS transporter	NA	NA	NA	NA
AWR40814.1\|107405_107576_+	galactoside O-acetyltransferase	NA	NA	NA	NA
AWR40815.1\|108430_109564_-	aldehyde dehydrogenase	E3SJ82	Synechococcus_phage	1.7e-09	28.9
AWR40816.1\|109915_110770_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	8.0e-81	56.2
AWR40817.1\|110766_111051_-\|transposase	IS3 family transposase	U5P4I9	Shigella_phage	8.9e-13	44.8

DBSCAN-SWA_11

123658 : 127534

Caulobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40829.1\|123658_124267_-	hypothetical protein	K4JV11	Caulobacter_phage	4.4e-25	38.5
AWR40830.1\|124422_124680_-	hypothetical protein	NA	NA	NA	NA
AWR40831.1\|124744_125173_-	hypothetical protein	NA	NA	NA	NA
AWR40832.1\|125264_125642_-	hypothetical protein	NA	NA	NA	NA
AWR40833.1\|126047_127229_-	hypothetical protein	NA	NA	NA	NA
AWR40834.1\|127237_127534_-	toxin-plasmid maintenance system killer protein	A0A222YWE2	Escherichia_phage	3.2e-05	35.1

DBSCAN-SWA_12

131989 : 135966

Salmonella_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40840.1\|131989_132421_-	hypothetical protein	A0A1V0E5M6	Salmonella_phage	4.2e-22	49.6
AWR40841.1\|132524_133049_-	hypothetical protein	NA	NA	NA	NA
AWR40842.1\|133371_134136_+	hypothetical protein	NA	NA	NA	NA
AWR40843.1\|134216_134978_+	SAM-dependent methyltransferase	A0A2I7RNS1	Vibrio_phage	1.3e-18	32.4
AWR40844.1\|135071_135335_+	hypothetical protein	M9UXL5	Escherichia_phage	3.2e-09	46.5
AWR40845.1\|135378_135966_+	hypothetical protein	A0A248SKW5	Klebsiella_phage	1.1e-09	71.1

DBSCAN-SWA_13

140928 : 141984

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR41049.1\|140928_141984_-	replication protein RepA	J9Q7H0	Salmonella_phage	2.1e-83	50.9

DBSCAN-SWA_14

147582 : 156302

Salmonella_phage(80.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40853.1\|147582_149274_-	restriction endonuclease subunit M	J9Q747	Salmonella_phage	5.8e-67	31.1
AWR40854.1\|149521_150685_-	DNA-binding protein	A0A1P8DTT7	Salmonella_phage	1.3e-17	32.1
AWR40855.1\|151054_151867_+	DNA modification methylase	A0A1C9II58	Salmonella_phage	1.2e-46	38.9
AWR40856.1\|151875_152730_-	hypothetical protein	NA	NA	NA	NA
AWR40857.1\|152964_153681_-	hypothetical protein	NA	NA	NA	NA
AWR40858.1\|153677_153878_-	hypothetical protein	NA	NA	NA	NA
AWR40859.1\|153897_154950_-	hypothetical protein	A0A2P9HXK7	Yersinia_phage	1.1e-12	31.2
AWR40860.1\|155426_156302_+	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	7.9e-60	42.7

DBSCAN-SWA_15

172148 : 173153

Aeromonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40871.1\|172148_173153_+	peptide transporter	A0A1I9KFW9	Aeromonas_phage	2.7e-11	33.8

DBSCAN-SWA_16

176258 : 178810

Enterobacteria_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40876.1\|176258_177296_+	stbA family protein	A0A0A7NPX4	Enterobacteria_phage	3.6e-43	35.0
AWR40877.1\|177307_177820_+	hypothetical protein	NA	NA	NA	NA
AWR40878.1\|177841_178810_+\|transposase	IS5/IS1182 family transposase	A0A1B0VFY5	Salmonella_phage	1.5e-184	99.1

DBSCAN-SWA_17

193044 : 194829

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40887.1\|193044_194829_+	DNA helicase	G3MA40	Bacillus_virus	6.0e-22	23.1

DBSCAN-SWA_18

227076 : 236005

Acinetobacter_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40921.1\|227076_228156_-	hypothetical protein	A0A172Q0S8	Acinetobacter_phage	2.8e-38	34.1
AWR40922.1\|228157_228931_-	hypothetical protein	NA	NA	NA	NA
AWR40923.1\|228923_230066_-	adenine/guanine phosphoribosyltransferase	A0A172Q0Y1	Acinetobacter_phage	6.5e-30	34.5
AWR40924.1\|230075_231134_-	carbamoyl-phosphate synthase large chain	NA	NA	NA	NA
AWR40925.1\|231454_232036_+	tellurium resistance protein TerZ	K4JRX3	Caulobacter_phage	6.3e-13	30.0
AWR40926.1\|232035_233193_+	tellurium resistance protein TerA	NA	NA	NA	NA
AWR40927.1\|233215_233671_+	Tellurium resistance protein TerB	NA	NA	NA	NA
AWR40928.1\|233693_234734_+	tellurium resistance protein TerC	K7QKE8	Escherichia_phage	2.2e-77	48.0
AWR40929.1\|234782_235361_+	tellurium resistance protein TerD	A0A2P1N0L4	Streptomyces_phage	2.5e-06	40.0
AWR40930.1\|235429_236005_+	tellurium resistance protein TerE	K4JRX3	Caulobacter_phage	8.7e-31	41.6

DBSCAN-SWA_19

240986 : 335380

Escherichia_phage(25.93%)

transposase,integrase

attL 323623:323682|attR 338410:339231

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR40937.1\|240986_241991_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AWR40938.1\|241953_242094_-	NTP-binding protein	NA	NA	NA	NA
AWR40939.1\|242140_243823_+\|transposase	transposase	M4T586	Rhodobacter_phage	3.7e-05	24.7
AWR40940.1\|243825_244734_+\|transposase	transposase	NA	NA	NA	NA
AWR40941.1\|244730_245948_+\|transposase	transposase	NA	NA	NA	NA
AWR40942.1\|246008_246623_+	resolvase	A0A0A7NPV4	Enterobacteria_phage	5.1e-37	51.0
AWR40943.1\|246661_246982_-\|transposase	transposase	NA	NA	NA	NA
AWR40944.1\|246997_247234_-	mercury resistance protein	NA	NA	NA	NA
AWR40945.1\|247230_247596_-	mercuric resistance transcriptional repressor protein MerD	NA	NA	NA	NA
AWR40946.1\|247707_248346_-	alkylmercury lyase	NA	NA	NA	NA
AWR40947.1\|248360_248714_-	hypothetical protein	NA	NA	NA	NA
AWR40948.1\|248643_249078_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
AWR40949.1\|249156_250161_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AWR40950.1\|250605_250896_+	nucleotidyltransferase	NA	NA	NA	NA
AWR40951.1\|250892_251294_+	DUF86 domain-containing protein	NA	NA	NA	NA
AWR40952.1\|251283_251640_+	cupin	NA	NA	NA	NA
AWR40953.1\|251894_252221_+	hypothetical protein	NA	NA	NA	NA
AWR40954.1\|252217_252718_+\|transposase	transposase	NA	NA	NA	NA
AWR40955.1\|252714_253086_+	hypothetical protein	NA	NA	NA	NA
AWR40956.1\|253079_253637_+	DNA invertase	A0A0C4UR34	Shigella_phage	3.3e-59	63.2
AWR40957.1\|253715_254720_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AWR40958.1\|256658_257645_-	hypothetical protein	NA	NA	NA	NA
AWR40959.1\|258565_258958_+	hypothetical protein	NA	NA	NA	NA
AWR40960.1\|259716_259899_+\|transposase	transposase	Q9G0F2	Phage_Gifsy-1	5.7e-13	58.3
AWR40961.1\|260026_260779_+	hypothetical protein	NA	NA	NA	NA
AWR40962.1\|261341_261641_+	XRE family transcriptional regulator	NA	NA	NA	NA
AWR40963.1\|262623_263775_+\|transposase	IS30 family transposase IS30	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
AWR40964.1\|264788_265706_+	hypothetical protein	NA	NA	NA	NA
AWR40965.1\|268197_269160_-	aminoimidazole riboside kinase	NA	NA	NA	NA
AWR40966.1\|269273_270287_-	hypothetical protein	NA	NA	NA	NA
AWR40967.1\|270299_271793_-	glycosyl hydrolase	NA	NA	NA	NA
AWR40968.1\|271807_273073_-	hypothetical protein	NA	NA	NA	NA
AWR40969.1\|273165_274599_-	glycosyl hydrolase family 32	S6ATV4	Bacillus_phage	1.2e-36	26.9
AWR40970.1\|274618_275857_-	MFS transporter	NA	NA	NA	NA
AWR40971.1\|276097_277093_+	transcriptional regulator	C6ZCU4	Enterobacteria_phage	1.2e-16	26.3
AWR40972.1\|278010_278436_+	hypothetical protein	NA	NA	NA	NA
AWR40973.1\|278581_278971_+	hypothetical protein	NA	NA	NA	NA
AWR40974.1\|280781_281777_-	hypothetical protein	NA	NA	NA	NA
AWR40975.1\|281805_283269_-	hypothetical protein	NA	NA	NA	NA
AWR40976.1\|283271_285392_-	hypothetical protein	NA	NA	NA	NA
AWR40977.1\|285378_286227_-	hypothetical protein	NA	NA	NA	NA
AWR40978.1\|287076_287733_+	hypothetical protein	NA	NA	NA	NA
AWR40979.1\|287935_288433_+	hypothetical protein	NA	NA	NA	NA
AWR40980.1\|288437_289826_+	hypothetical protein	NA	NA	NA	NA
AWR41053.1\|290226_290520_+	transcriptional regulator	NA	NA	NA	NA
AWR40981.1\|290524_291850_+	toxin HipA	NA	NA	NA	NA
AWR40982.1\|291910_292117_+	hypothetical protein	NA	NA	NA	NA
AWR40983.1\|292217_292628_+	hypothetical protein	NA	NA	NA	NA
AWR40984.1\|292640_293456_+	HNH endonuclease	G0X580	Salmonella_phage	2.5e-15	37.2
AWR40985.1\|293708_294134_+	hypothetical protein	NA	NA	NA	NA
AWR40986.1\|294682_294991_+	hypothetical protein	NA	NA	NA	NA
AWR40987.1\|295006_295864_+	HNH endonuclease	G0X580	Salmonella_phage	3.9e-11	34.2
AWR40988.1\|295925_296129_+	hypothetical protein	NA	NA	NA	NA
AWR40989.1\|296470_296875_-	DNA-binding protein	NA	NA	NA	NA
AWR40990.1\|297052_297346_-	hypothetical protein	NA	NA	NA	NA
AWR40991.1\|297371_297608_-	hypothetical protein	NA	NA	NA	NA
AWR40992.1\|297648_298104_-	hypothetical protein	NA	NA	NA	NA
AWR40993.1\|298379_299360_-\|transposase	IS5/IS1182 family transposase	A0A077SK28	Escherichia_phage	1.8e-185	99.1
AWR40994.1\|299405_300029_-	hypothetical protein	NA	NA	NA	NA
AWR40995.1\|300086_300467_-	hypothetical protein	NA	NA	NA	NA
AWR40996.1\|301221_301404_+	hypothetical protein	NA	NA	NA	NA
AWR40997.1\|304376_305081_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWR40998.1\|305362_305539_+	hypothetical protein	Q716C2	Shigella_phage	6.7e-11	58.0
AWR40999.1\|305606_305822_-	hypothetical protein	NA	NA	NA	NA
AWR41000.1\|305902_306571_-	TetR family transcriptional regulator	NA	NA	NA	NA
AWR41001.1\|306671_307871_+	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
AWR41002.1\|308385_308889_+	hypothetical protein	NA	NA	NA	NA
AWR41003.1\|308925_309630_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWR41004.1\|309688_310156_+	restriction endonuclease	NA	NA	NA	NA
AWR41005.1\|310160_310367_+	hypothetical protein	NA	NA	NA	NA
AWR41006.1\|310748_312182_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
AWR41007.1\|312215_313424_-	restriction endonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
AWR41008.1\|313436_313649_-	resolvase	NA	NA	NA	NA
AWR41009.1\|313690_314455_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
AWR41010.1\|314597_314864_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
AWR41011.1\|315084_315567_-	trimethoprim-resistant dihydrofolate reductase DfrA14	G3MBI7	Bacillus_virus	6.6e-16	28.9
AWR41012.1\|315713_316727_+\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AWR41013.1\|316665_316980_+\|transposase	transposase	NA	NA	NA	NA
AWR41014.1\|317260_317965_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWR41054.1\|318108_318663_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
AWR41055.1\|318793_319624_+	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA
AWR41015.1\|320255_320960_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWR41016.1\|321066_321927_+	aminoglycoside N-acetyltransferase AAC(3)-IIa	NA	NA	NA	NA
AWR41017.1\|321939_322482_+	tunicamycin resistance protein	NA	NA	NA	NA
323623:323682	attL	NA	NA	NA	NA
AWR41018.1\|323675_324380_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWR41019.1\|326701_327034_+	tryptophan synthase subunit beta like protein	NA	NA	NA	NA
AWR41020.1\|327080_327956_-	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
AWR41021.1\|328211_329474_-\|transposase	IS1380 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
AWR41022.1\|330037_330595_+\|transposase	transposase	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
AWR41023.1\|330777_331638_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
AWR41024.1\|331847_332387_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AWR41025.1\|332358_333195_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
AWR41026.1\|333194_333998_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
AWR41027.1\|334058_334874_-	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
AWR41028.1\|335203_335380_+\|integrase	integrase	T1S9J3	Salmonella_phage	1.0e-06	68.6
338410:339231	attR	NA	NA	NA	NA

DBSCAN-SWA_20

338462 : 344943

Escherichia_phage(50.0%)

transposase,integrase

attL 331170:331184|attR 342064:342078

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
331170:331184	attL	NA	NA	NA	NA
AWR41030.1\|338462_339167_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWR41031.1\|339237_340251_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AWR41056.1\|340396_341188_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
AWR41032.1\|342061_342253_-	hypothetical protein	NA	NA	NA	NA
342064:342078	attR	NA	NA	NA	NA
AWR41033.1\|342306_342981_+	type A chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	2.5e-130	100.0
AWR41034.1\|343713_344943_+	sensor histidine kinase	W8CYF6	Bacillus_phage	8.1e-18	26.6

DBSCAN-SWA_21

351470 : 351638

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR41042.1\|351470_351638_-	hypothetical protein	A0A2D2W2Z9	Escherichia_phage	7.3e-07	50.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP021464

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP021462

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP021463

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection