CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP029686	Lactobacillus paracasei strain Lpc10 chromosome, complete genome	3 crisprs	DEDDh,cas3,csa3,WYL,DinG,cas9,cas1,cas2,csn2,RT	0	9	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP029686_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029686_1

1222836-1222980

Orphan

Consensus_repeat	Method
TTTCGAAACGCGCAAACAGGCGCAGAAACCTGCTCATAAGGACCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029686_1

>merge|CP029686|1|1222836-1222980|CRISPRCasFinder
TTTCGAAACGCGCAAACAGGCGCAGAAACCTGCTCATAAGGACCCCAAGCCTAAATGCCAAAGCCCGGCCATTTAGGCTTGGGGCCGCTTATGCTCTACTTTCGAAACGCGCAAACAGGCGCAGAAACCTGCTCATAAGGACCCC

>CP029686|1|1|1222836-1222980|CRISPRCasFinder
TTTCGAAACGCGCAAACAGGCGCAGAAACCTGCTCATAAGGACCCC	AAGCCTAAATGCCAAAGCCCGGCCATTTAGGCTTGGGGCCGCTTATGCTCTAC
TTTCGAAACGCGCAAACAGGCGCAGAAACCTGCTCATAAGGACCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP029686.1\|AWR90765.1\|1228903_1229755_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|223695
CP029686.1\|AWR90760.1\|1222048_1222735_+\|hydrolase	unknown	unknown	gnl\|CDD\|270620
CP029686.1\|AWR90764.1\|1228025_1228907_+\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224995
CP029686.1\|AWR90755.1\|1218649_1218790_+\|alpha-galactosidase	unknown	unknown	unknown
CP029686.1\|AWR90756.1\|1218775_1219108_-\|hypothetical-protein	unknown	unknown	unknown
CP029686.1\|AWR90769.1\|1232000_1233353_-\|gluconate-permease	unknown	unknown	gnl\|CDD\|129873
CP029686.1\|AWR90766.1\|1229822_1230620_-\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224033
CP029686.1\|AWR92528.1\|1226025_1226229_+\|hypothetical-protein	unknown	unknown	unknown
CP029686.1\|AWR90754.1\|1217885_1218485_+\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
CP029686.1\|AWR90751.1\|1214042_1214783_+\|methylase	unknown	unknown	gnl\|CDD\|379312
CP029686.1\|AWR90759.1\|1220845_1221604_-\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
CP029686.1\|AWR90753.1\|1216869_1217808_+\|ADP-ribosylglycohydrolase-family-protein	unknown	unknown	gnl\|CDD\|377122
CP029686.1\|AWR90761.1\|1223476_1224856_+\|branched-chain-amino-acid-transport-system-II-carrier-protein	unknown	unknown	gnl\|CDD\|283235
CP029686.1\|AWR90767.1\|1230616_1231336_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213202
CP029686.1\|AWR90762.1\|1225006_1226101_-\|LytR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|181811
CP029686.1\|AWR90768.1\|1231409_1231754_-\|hypothetical-protein	unknown	unknown	unknown
CP029686.1\|AWR90757.1\|1219216_1219960_-\|DUF975-domain-containing-protein	unknown	unknown	gnl\|CDD\|227810
CP029686.1\|AWR90763.1\|1226229_1228029_+\|oligoendopeptidase-F	unknown	unknown	gnl\|CDD\|341071
CP029686.1\|AWR90758.1\|1219978_1220761_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
CP029686.1\|AWR90752.1\|1214942_1216490_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223562

Protein	Function_ID	Function_description	E-value
CP029686.1\|AWR90765.1\|1228903_1229755_+\|metallophosphoesterase	gnl\|CDD\|223695	COG0622, COG0622, Predicted phosphoesterase [General function prediction only].	2.75673e-13
CP029686.1\|AWR90760.1\|1222048_1222735_+\|hydrolase	gnl\|CDD\|270620	cd14667, 3D_containing_proteins, Non-mltA associated 3D domain containing proteins, named for 3 conserved aspartate residues. This family contains the 3D domain, named for its 3 conserved aspartates, including similar uncharacterized proteins. These proteins contain the critical active site aspartate of mltA-like lytic transglycosylases where the 3D domain forms a larger domain with the N-terminal region. This domain is also found in conjunction with numerous other domains such as the Escherichia coli MltA, a membrane-bound lytic transglycosylase comprised of 2 domains separated by a large groove, where the peptidoglycan strand binds. Domain A is made up of an N-terminal and a C-terminal portion, corresponding to the 3D domain and Domain B is inserted within the linear sequence of domain A. MltA is distinct from other bacterial LTs, which are similar to each other. Escherichia coli peptidoglycan lytic transglycosylase (LT) initiates cell wall recycling in response to damage, during bacterial fission, and cleaves peptidoglycan (PG) to create functional spaces in its wall. PG chains (also known as murein), the major components of the bacterial cell wall, are comprised of alternating beta-1-4-linked N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), and lytic transglycosylases cleave this beta-1-4 bond.	2.76198e-08
CP029686.1\|AWR90764.1\|1228025_1228907_+\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	5.68511e-110
CP029686.1\|AWR90769.1\|1232000_1233353_-\|gluconate-permease	gnl\|CDD\|129873	TIGR00791, Gluconate_permease, gluconate transporter. This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	4.50632e-167
CP029686.1\|AWR90766.1\|1229822_1230620_-\|metal-ABC-transporter-permease	gnl\|CDD\|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	1.10945e-41
CP029686.1\|AWR90762.1\|1225006_1226101_-\|LytR-family-transcriptional-regulator	gnl\|CDD\|181811	PRK09379, PRK09379, LytR family transcriptional regulator.	1.41929e-91
CP029686.1\|AWR90751.1\|1214042_1214783_+\|methylase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.69233e-07
CP029686.1\|AWR90759.1\|1220845_1221604_-\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	4.33431e-57
CP029686.1\|AWR90753.1\|1216869_1217808_+\|ADP-ribosylglycohydrolase-family-protein	gnl\|CDD\|377122	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase. This family includes enzymes that ADP-ribosylations, for example ADP-ribosylarginine hydrolase EC:3.2.2.19 cleaves ADP-ribose-L-arginine. The family also includes dinitrogenase reductase activating glycohydrolase. Most surprisingly the family also includes jellyfish crystallins, these proteins appear to have lost the presumed active site residues.	7.47758e-32
CP029686.1\|AWR90761.1\|1223476_1224856_+\|branched-chain-amino-acid-transport-system-II-carrier-protein	gnl\|CDD\|283235	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein. This family consists of several bacterial branched-chain amino acid transport proteins which are responsible for the transport of leucine, isoleucine and valine via proton motive force.	7.36575e-108
CP029686.1\|AWR90767.1\|1230616_1231336_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213202	cd03235, ABC_Metallic_Cations, ATP-binding cassette domain of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.	5.1545e-66
CP029686.1\|AWR90754.1\|1217885_1218485_+\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	6.78672e-47
CP029686.1\|AWR90757.1\|1219216_1219960_-\|DUF975-domain-containing-protein	gnl\|CDD\|227810	COG5523, COG5523, Predicted integral membrane protein [Function unknown].	5.48812e-07
CP029686.1\|AWR90763.1\|1226229_1228029_+\|oligoendopeptidase-F	gnl\|CDD\|341071	cd09608, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF). Peptidase family M3B oligopeptidase F (PepF; Pz-peptidase B; EC 3.4.24.-) is mostly bacterial and includes oligoendopeptidase F from Lactococcus lactis. This enzyme hydrolyzes peptides containing between 7 and 17 amino acids with fairly broad specificity. The PepF gene is duplicated in L. lactis on the plasmid that bears it, while a shortened second copy is found in Bacillus subtilis. Most bacterial PepFs are cytoplasmic endopeptidases; however, the Bacillus amyloliquefaciens PepF oligopeptidase is a secreted protein and may facilitate the process of sporulation. Specifically, the yjbG gene encoding the homolog of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when over-expressed from a multicopy plasmid. This PepF family includes Streptococcus agalactiae PepB, a group B streptococcal oligopeptidase which has been shown to degrade a variety of bioactive peptides as well as the synthetic collagen-like substrate N-(3-[2-furyl]acryloyl)-Leu-Gly- Pro-Ala in vitro.	0
CP029686.1\|AWR90758.1\|1219978_1220761_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	5.11135e-36
CP029686.1\|AWR90752.1\|1214942_1216490_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	1.45525e-169

>CP029686.1|AWR90760.1|1222048_1222735_+|hydrolase
MASNHSQKVEAIADHADADNDSSHVNAKSIVLSNEAKVEQANAHSLINPKKEITFTVGTNDIAEAAHQIADQKAAAAKAAEEQAAAEQAAAEQAAAEQAAAEKAQQEAQQAAQNAAAASAASAASASSSAATTASTETTTNKGTFKLSFYDPSVLGSGLGYGGVAANLSVFPKGTRLKITLSDGTVWYRTVNDTGSFAAGNPNQLDVAMPNSQIPSAGVLTATVEVVG
>CP029686.1|AWR90759.1|1220845_1221604_-|DeoR/GlpR-transcriptional-regulator
MAMYREKRFEEIKKLLAARSELSIEDIMKAVGVSRDTARRDIVALDAQGVARRTRGGLVSLSFGHTIPSYSARLKRFSTQKTKMAKSALTLIKPGGVYFIDDSTTLLKLSQSIRQPVTVYTHSLDNAIALSVEERVNLHLFGGKLDHHARFFFEPTMLETLRRIAFDAAFIGATAIAEDGVYFSYMEDAQVKQAAALSARRVVVVSETEKFQIEAPYRGLELGQITTLITDKKLSQTHKQWFAPQTQFLLGD
>CP029686.1|AWR90758.1|1219978_1220761_-|glycosyltransferase-family-2-protein
MVKPLVTIIVPVYNLEAYVAHGLKSLIEQTYSHLQIIVIDDASKDHSPQIIAHFAELDSRIQPILKQVNHGVSAARNSGLALAKGDLVAFMDGDDWYEPDFIAHAVDMMARGWDLIAMPFYRDDPDPRPVHEALRKPKQLTREGLIRQMLHPIGYIRGYLWNKVFRRDVIEQVRLRFDESMTIMEDELFTATYVMATHRFLYTGHPAYHHVVRRDSATQSLGIIGAVPQQLYALWRIHQVLRVARRTEKVTKKEAIKIEH
>CP029686.1|AWR90757.1|1219216_1219960_-|DUF975-domain-containing-protein
MTEHLMTYRQLKQKAKGQLKEGTNRRDLMLAYLLPSLIQAAVAIITYLMVFALIQKFGIDKALTDPDGFQNYLQSGNRTGSMNTIQSLVNTMLIQGVNFGVLDLVRRKERVQPLHALLGLFNGQWFWGAISLWIFMYFLTLMGLSFFLIPGILLALGWRQAFWVFKDGHETNQRFSSISALIGSWRLMRGFKGDLLGLYVSMIGWYLLENITFHLFDWVINPYLQLVHANYYENRRAYKIAAQAAQS
>CP029686.1|AWR90756.1|1218775_1219108_-|hypothetical-protein
METEAYMTLAEVKARQAALKDKVPLDQAIAENIQNWAQWLLDEGFEGSYFTAKIDGDTINITDLDGHPAASISTDAPSYVEAFKDSDRMTMMAIQTKLRRLIDRQVLKSQ
>CP029686.1|AWR90755.1|1218649_1218790_+|alpha-galactosidase
MLGLLSITRSPSQKPTHKNLEPKWPFRFEATYAPVSKRAGSRSLRL
>CP029686.1|AWR90754.1|1217885_1218485_+|signal-peptidase-I
MKNNSHSTLKTVLEFLVLFAVIFFASQLLMRYVLSKDVVQGTSMQPTLENGDRLYSIRVKKPKRNDIVVINAPDRPGSLYIKRVIGMPGDTVSSKDNQLSVNGKKIAEPYLNKKFATDEINKWASQQGLDASTIKFTNDFNIKTLSSTKSAKVPAGKYFVMGDNRLVSHDSRDFGFVDKSKIQSVVVWRYWPLNQMKLY
>CP029686.1|AWR90753.1|1216869_1217808_+|ADP-ribosylglycohydrolase-family-protein
MGIMESRLIHGTVGFAIGDALGLPVKGQNAAELTAAPVTTMKGYGTFNQPAGTYSDETGLALAGLDALQHGFDEQALIKAYQAWFTAGKYAPYGKRSPDIWPSIETALKTGQSVASPKEPGALIRILPFAFFAYQTFDTSLFQKAEGVKVLETFVHITNQDAENLVAAGIYMQIAVELLGATPDLPSAIATGTDKAGSYFGTTQPYQPIFEAFQAALADDKWPDESATDPISLLARTLKALQSKPDYHDAVLQTVNQGGATDTTGALVGGLAGLAYGYTSLPHRWCLMLAEYAQIVDLCRQAENSGLFPKYD
>CP029686.1|AWR90752.1|1214942_1216490_-|ABC-transporter-ATP-binding-protein
MSVLTVTGLSQRFLDKVLYQDASFQVNIEDHLGVIGQNGVGKSTLIKILTGTLTPDAGKIVWQKHLHVGYLDQYANLVPGQTVIEFLRTAFSDLYRKEAKMNQIYADYANHPDDDLLAKAGELQQELEAGDFYDLETTIQTVAEGLGITAMGMDHPVEALSGGQRSKLILAKLLLEKPDMLLLDEPTNYLDVSHIAWLTDWLQNFEGAFIVISHDFDFLENVTNAVLDIEFGQITKYTGTLKQAMRQKEADHETYLKAFAKQQETIKKTEAFIRKFKAGTRATMAKSREKQLARMDKLTPPGTRSKAHLAFPYAPVNRQILVDVNDLVVGYDKPLLQPMNFSVAKDQIIAFEGFNGVGKSTLLKTLLGLLPAISGNVEIADNVVFGYYEQELHWDQPKQSPVQYLEQRFPALTQKTVRQVLSRTALTSEEANNPLTMLSGGEQAKVKLADLMLQTTNILVMDEPTNHLDDDTKNALREGLQQYPGAVLLVSHEAGFYDSSWVDTVVNVEQLQVKA
>CP029686.1|AWR90751.1|1214042_1214783_+|methylase
MTEVQAFWNAFAPDYAAAEQASRLPIAHDVIAWLRSTQLLPAHSAVDLAAGTGRYAVQMMPWVQELTLIDWSSAMLAFAKERMHQQADTKAQFIVADWRKLHKPLNADMLFVSQLPTLKPQDLKMLMNWANQTVVLNFQTAQSDALLEQAASLLGLQLPPVYQADPARMTSFKVWLTAQRIPFQSHSLTYEIEEQTTLSDLLPDLATPIGLKTAASLAKTITGHENTHVQVTDRLTYTYTQLVWHV
>CP029686.1|AWR90761.1|1223476_1224856_+|branched-chain-amino-acid-transport-system-II-carrier-protein
MSPQPTLTKRQYLTLGSLLFGMFFGAGNLIFPIHMGQLAGSAWLPAAIGFLLSAVLLPLLSIMAISLTRASSMYDLARPAGHSFALFFLLATHASLGLLIASPRTATVTYSIGIAPFLGKDQQQIGLLIFSFIFFLTTFLLARNESKITTYIGKLLNPLLLILLAVIFFWALVIKGDIRAISFTSSPKLMSSNLINGFLQGYNTMDALAGLGFGVTIITALKLMGLHQASTRAKAVAKVGSLAMGLEALIYMLLILLGAISLGFSKLTANGGTAFNQIMTHYTGLIGTALLGAMTLLACLTTAIGLVTSFSQDLGHRFPKLGYHFFLPMTTIGAFLIANFGLDQIIAYSTPILMLLYPLAIALIMLGLMHPWIGKNTRIYKTTVAFTMIPALLDAIHALPAGLAQLPIFSSIQQFATTYIPWFGIGMDFVPFLLIGFLTGFIAAKLSGHKLAPDLPDPD
>CP029686.1|AWR90762.1|1225006_1226101_-|LytR-family-transcriptional-regulator
MDKQPDSDQQTLKRKPKRRHPILRALAIIALVALFLAGGYAARFYSQAKKAVAKTYDPVSTKAVSSDLDGKKPISILLLGTDTGAFGRKDTGRSDTMMLVTINPKEKKTTMTSIPRDTLAEMVGTGSDSPTYEKINAAYAYGQSDAAIKTVEKLLDVPINYYVTVNMAGLSKIVDAVGGVDVNVPFSWTDWNTGGQTFKKGKAHLDGGMALAYARMRDEDPEGDYGRQKRQQEVINQIVKHLLSVKSLTNYQKVMDSLSSSMRTNLTFDDMMAIAQNYRASATTIDRQQLKGIGVYIDEAAYQVMTTETLQKMSNELRGQLGLESKTLSNFNTQQNEINNANGFDWTANNPVYTVSLDGATTGP
>CP029686.1|AWR92528.1|1226025_1226229_+|hypothetical-protein
MHEESDDVVLVCVLMFVDLNLVACPFELHSTFSFQSSLADNYEEKRDLSQMPPQYGNIKEILEIGAD
>CP029686.1|AWR90763.1|1226229_1228029_+|oligoendopeptidase-F
MQHLPARAEVPTELTWDLTTIYPDDKAWQVDFEAVRQQAKEAAALKGTLGKSPEALVAGIKAVLAVFRRFEKVYVYSSLKSDQDTGNAAYQAMNAKAESLAADLASQLAFMDPEILAIPADQLTAWRDTESLKPYGHFIDAITVNRQHVLTTAAESLIASAGDALNASHATFNVLNNSDLQFGFVENEDGETVQLSNGLYGQLIRSTNRKLRKDAFEALLRAYESLKNTFAQTLSGQIKAHNFNALAHHYPDARAAAMASNHIPESVYTTLLDQVNAHLPLLHRYIALRKKILNVDQLHMYDIYTPLTGRPPLSFTLDQAKDEALKALAPLGNDYLDHMREIFNNRYIDVVENKGKRSGAYSGGAYDTNPFILLNWHDAVDELYTLVHETGHSVHSWYTRHHQPYVYGDYPIFVAEIASTTNENLLTDYFLKNTNDPKVRAYILNYYLDGFKGTVFRQAQFADFEHWIHQQDQHGEPLTATSMSSYYADLNARYYGPDVARDPEIAFEWARIPHFYYNYYVYQYATGFAAASTLAAGISGGEPEAVSRYIGYLKSGSSKYAIDTMKAAGVDMTKPDYLEAAFSLFEQRLAELEKILQKG
>CP029686.1|AWR90764.1|1228025_1228907_+|NAD(P)-dependent-oxidoreductase
MSSVKLGFIGTGVMGTGIIKNFLKNGQEVVVFNRTQAHAQPVIEAGATWAESPHAVAAQCDIVLSMVGFPQDVETIYFGSDGILAGARKGALLIDMTTSTPTLAKKIAAKAAEKGLQAVDAPVSGGDIGAKNGTLTIMVGGDKTLLSRLQQLFAPIAASVNYFGPAGSGQHAKMANQIMIAGTMTGLTEMLVYAKAAGLDLDETLKVVGGGAGANWSLSNYGPRILQGDYTPGFFAKHFLKDLRIALDEADNMHLQLPATQLAKQLYEQMVNTGKGNLGTQGLITMNDRWDQA
>CP029686.1|AWR90765.1|1228903_1229755_+|metallophosphoesterase
MTTIAILSDIHGNMTAFSAVIQDAKAHQADEYWFLGDLFLPGPGSDKLWATLHGLKPTHIVKGNWDDDLFWVLDGPVDLSQPTDVYFSRLVAYLWPHLTAENLATIRNWPLHEVFEQDGLIVSLAHNLPDKNQGHALYPDQPQLNFDQIAPDSQIDLAVYGHTHQQLLRYTSNGQVILNPGSIGQAYSPRPHLQTTTYADYALLQLNDGAITDLDLRQVPYDVSAELSLAKQQQLPYPEVYTKLRHTGATSTHNAAYLKQFEQRHDYQQEVAEFLHKYRHQHY
>CP029686.1|AWR90766.1|1229822_1230620_-|metal-ABC-transporter-permease
MNLFAYAFMQNAFMASTFIAITTGIVGVFVVARNMSFLAHTLSEVGFAGAAFAVFAGIRPLDGMLLFTAISSISVGRMSVQASRREASISAVSSLFIGLGILFLSLSSANASYATTILFGSIIGISRADVWQLVALAAGVLVTLYFGYRRLAFDSFDPVGSAAQGLKSKYISIYFLLILAVSVSIGAQIVGSLLVFILLTLPPNVAKYLGRTLPQMIVISVITALIGVWSGLYLGFLTNWPVTFFIAAIEFLFYFLALWYHHRTN
>CP029686.1|AWR90767.1|1230616_1231336_-|ABC-transporter-ATP-binding-protein
MSEPILTVNHLSFGFRDQQLYQDLSFQLNVGSMTSLVGPNGVGKTTLIRLLMAQLKPQAGTIRFRQQPPVRLGYVPQFRNVDTEFPLSIRSFIQLRQLDHLFFWHTGKEKAALDAVIKATHLGKIADTRLGMASGGEKQKAYLAQALLDDPNFLILDESTASLDVNTKQELMDLVQELNQTRQLTVLFVTHDLSLAKKYTQQYLLLTGSSYEMKPTAQMDLKAMPEELRNDAENRGVIA
>CP029686.1|AWR90768.1|1231409_1231754_-|hypothetical-protein
MYEPTKKRRVAEDVAKVFPKEVTNQIFDVIAVMNKAKQIVTAPVAIAFSDDYTDDEMYAMIIQGNLAPAQEFPLTYAGEKPFLGHGYILVVKDKPKTIRLDFSTANPFKAEESK
>CP029686.1|AWR90769.1|1232000_1233353_-|gluconate-permease
MDILVLVLGILLLLVLIIKFKFNTYVSLIITAVVVALGLGMAPAKIATSIQNGIGAQLGELALVFGFGAMLGRLVADAGGAYRIAHTLINAFGRRGLQLAVVLASFIIGIALFFEVGIVLLVPIVFAIAAEAGVPILTLGIPMAAALSVTHGFLPPHPAPTAISTALGASAGLVLAYGVIIAIPTVYIAGPLFSKLAHRFVPDAFERRGNLKALGPQKTFKLEETPSFGISVLTSLFPVILMAIATVYELVFHGGKLPKTPNGLDNVIAFIGSPSIAMLISLLFAMWAMGYARKLPAKAIMTTLEDAVKSIAMLLLVIGGGGAFKQVLIDGGVGDSVKNLFVGSGISPLILGWLIAVVLRIALGSATVAAMTASGLVLPLMQSAGIQPALMVLAIGAGSLAASHVNDAGFWMFREYFDLTIKQTLLTWTLLETIISVVGLGGVLLLSLVV

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Crispr_ID: CP029686_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029686_2

2238194-2239681

TypeII

Consensus_repeat	Method
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	PILER-CR
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CRISPRCasFinder
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CRT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	PILER-CR
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	PILER-CR

22 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of CP029686_2

>merge|CP029686|2|2238194-2239681|PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCATTTGTTGGTGCAGACATCTCCACAATCATGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCTGAGCGTTTTTCTTTCCTCAGGTGGTTGGCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCACCAATCGTAGTAACTCTTAGCGTTAGTGTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCTTAAGTTTTGTCATCAGCACTGACCAGCCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCGAGTCGGCACGGATTCAACATGCGGCACAGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCATACAAAAAAAATCATACAGCCTGCATCACGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCGGCATTGCCTCGGCGCATGGCTGGGGTGCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCTAAACGTTCGCGAACCTCATTCAAGCTAAGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCATGGATGATGCATTTGATCGACAGTGGCCCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCGTGTTAGACTTAGATGTGGATGTTGCCCCGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCCCTTTCGCCGCCATCTTTGATCGCCCACGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCGCTATCTGGCTTGAATTCCTTAATCGATTTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCAAGCCGATGATATAAAGAAAGACGCCCCTTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCGAGGCTTACCCCGTCTTTACCAGTTGGTCCGTCTCAGGTAGATGCCGAATCAATCAGTTCAAGAGCTTGTTCATAGCAGCGTTGGCACGGGTATTGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCATGAAAGCCAGCGAAGGCACATTTTTTACTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCGTGTTATTGTAATTAGTCGCCAAGTCTTGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCGCTGTCAAGTATCTCATGTCCTTCTAGAAAGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCAACGTTGACCGCTCTGTCTCACGAAACTGGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCGAACTTTGTATCGTTTCTCTTTGCGCACGGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCACGTTAAACGTACACCATGCCGCACAGTCCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCGACGATCTCGCACATGCTCAGTGATATGCGGTCTCAGGTAGATGTCGAATCAATCATTTAAATGAC

>CP029686|2|1|2238194-2238889|PILER-CR
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATTTGTTGGTGCAGACATCTCCACAATCAT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TGAGCGTTTTTCTTTCCTCAGGTGGTTGGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACCAATCGTAGTAACTCTTAGCGTTAGTGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTAAGTTTTGTCATCAGCACTGACCAGCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGAGTCGGCACGGATTCAACATGCGGCACA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATACAAAAAAAATCATACAGCCTGCATCAC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGGCATTGCCTCGGCGCATGGCTGGGGTGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTAAACGTTCGCGAACCTCATTCAAGCTAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATGGATGATGCATTTGATCGACAGTGGCCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GTGTTAGACTTAGATGTGGATGTTGCCCCG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCCCTTTCGCCGCCATCTTTGATCGCCCACGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GCTATCTGGCTTGAATTCCTTAATCGATTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAGCCGATGATATAAAGAAAGACGCCCCTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GAGGCTTACCCCGTCTTTACCAGTTGGTCC
GTCTCAGGTAGATGCCGAATCAATCAGTTCAAGAGC	TTGTTCATAGCAGCGTTGGCACGGGTATTG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATGAAAGCCAGCGAAGGCACATTTTTTACT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCGTGTTATTGTAATTAGTCGCCAAGTCTTGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GCTGTCAAGTATCTCATGTCCTTCTAGAAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AACGTTGACCGCTCTGTCTCACGAAACTGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GAACTTTGTATCGTTTCTCTTTGCGCACGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACGTTAAACGTACACCATGCCGCACAGTCC


>CP029686|2|2|2238194-2239681|CRISPRCasFinder
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATTTGTTGGTGCAGACATCTCCACAATCAT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TGAGCGTTTTTCTTTCCTCAGGTGGTTGGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACCAATCGTAGTAACTCTTAGCGTTAGTGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTAAGTTTTGTCATCAGCACTGACCAGCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGAGTCGGCACGGATTCAACATGCGGCACA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATACAAAAAAAATCATACAGCCTGCATCAC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGGCATTGCCTCGGCGCATGGCTGGGGTGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTAAACGTTCGCGAACCTCATTCAAGCTAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATGGATGATGCATTTGATCGACAGTGGCCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GTGTTAGACTTAGATGTGGATGTTGCCCCG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CCCTTTCGCCGCCATCTTTGATCGCCCACG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GCTATCTGGCTTGAATTCCTTAATCGATTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAGCCGATGATATAAAGAAAGACGCCCCTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GAGGCTTACCCCGTCTTTACCAGTTGGTCC
GTCTCAGGTAGATGCCGAATCAATCAGTTCAAGAGC	TTGTTCATAGCAGCGTTGGCACGGGTATTG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATGAAAGCCAGCGAAGGCACATTTTTTACT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGTGTTATTGTAATTAGTCGCCAAGTCTTG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GCTGTCAAGTATCTCATGTCCTTCTAGAAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AACGTTGACCGCTCTGTCTCACGAAACTGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GAACTTTGTATCGTTTCTCTTTGCGCACGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACGTTAAACGTACACCATGCCGCACAGTCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GACGATCTCGCACATGCTCAGTGATATGCG
GTCTCAGGTAGATGTCGAATCAATCATTTAAATGAC

>CP029686|2|1|2238194-2239681|CRT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATTTGTTGGTGCAGACATCTCCACAATCAT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TGAGCGTTTTTCTTTCCTCAGGTGGTTGGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACCAATCGTAGTAACTCTTAGCGTTAGTGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTAAGTTTTGTCATCAGCACTGACCAGCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGAGTCGGCACGGATTCAACATGCGGCACA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATACAAAAAAAATCATACAGCCTGCATCAC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGGCATTGCCTCGGCGCATGGCTGGGGTGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTAAACGTTCGCGAACCTCATTCAAGCTAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATGGATGATGCATTTGATCGACAGTGGCCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GTGTTAGACTTAGATGTGGATGTTGCCCCG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CCCTTTCGCCGCCATCTTTGATCGCCCACG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GCTATCTGGCTTGAATTCCTTAATCGATTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAGCCGATGATATAAAGAAAGACGCCCCTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GAGGCTTACCCCGTCTTTACCAGTTGGTCC
GTCTCAGGTAGATGCCGAATCAATCAGTTCAAGAGC	TTGTTCATAGCAGCGTTGGCACGGGTATTG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATGAAAGCCAGCGAAGGCACATTTTTTACT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGTGTTATTGTAATTAGTCGCCAAGTCTTG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GCTGTCAAGTATCTCATGTCCTTCTAGAAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AACGTTGACCGCTCTGTCTCACGAAACTGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GAACTTTGTATCGTTTCTCTTTGCGCACGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACGTTAAACGTACACCATGCCGCACAGTCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GACGATCTCGCACATGCTCAGTGATATGCG
GTCTCAGGTAGATGTCGAATCAATCATTTAAATGAC

>CP029686|2|2|2238920-2239285|PILER-CR
	ATTTGTTGGTGCAGACATCTCCACAATCAT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TGAGCGTTTTTCTTTCCTCAGGTGGTTGGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACCAATCGTAGTAACTCTTAGCGTTAGTGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTAAGTTTTGTCATCAGCACTGACCAGCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGAGTCGGCACGGATTCAACATGCGGCACA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATACAAAAAAAATCATACAGCCTGCATCAC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGGCATTGCCTCGGCGCATGGCTGGGGTGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTAAACGTTCGCGAACCTCATTCAAGCTAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATGGATGATGCATTTGATCGACAGTGGCCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GTGTTAGACTTAGATGTGGATGTTGCCCCG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCCCTTTCGCCGCCATCTTTGATCGCCCACGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GCTATCTGGCTTGAATTCCTTAATCGATTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAGCCGATGATATAAAGAAAGACGCCCCTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GAGGCTTACCCCGTCTTTACCAGTTGGTCC
GTCTCAGGTAGATGCCGAATCAATCAGTTCAAGAGC	TTGTTCATAGCAGCGTTGGCACGGGTATTG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATGAAAGCCAGCGAAGGCACATTTTTTACT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCGTGTTATTGTAATTAGTCGCCAAGTCTTGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GCTGTCAAGTATCTCATGTCCTTCTAGAAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AACGTTGACCGCTCTGTCTCACGAAACTGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GAACTTTGTATCGTTTCTCTTTGCGCACGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACGTTAAACGTACACCATGCCGCACAGTCC


>CP029686|2|3|2239316-2239615|PILER-CR
	ATTTGTTGGTGCAGACATCTCCACAATCAT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TGAGCGTTTTTCTTTCCTCAGGTGGTTGGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACCAATCGTAGTAACTCTTAGCGTTAGTGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTAAGTTTTGTCATCAGCACTGACCAGCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGAGTCGGCACGGATTCAACATGCGGCACA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATACAAAAAAAATCATACAGCCTGCATCAC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGGCATTGCCTCGGCGCATGGCTGGGGTGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTAAACGTTCGCGAACCTCATTCAAGCTAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATGGATGATGCATTTGATCGACAGTGGCCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GTGTTAGACTTAGATGTGGATGTTGCCCCG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCCCTTTCGCCGCCATCTTTGATCGCCCACGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GCTATCTGGCTTGAATTCCTTAATCGATTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAGCCGATGATATAAAGAAAGACGCCCCTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GAGGCTTACCCCGTCTTTACCAGTTGGTCC
GTCTCAGGTAGATGCCGAATCAATCAGTTCAAGAGC	TTGTTCATAGCAGCGTTGGCACGGGTATTG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATGAAAGCCAGCGAAGGCACATTTTTTACT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCGTGTTATTGTAATTAGTCGCCAAGTCTTGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GCTGTCAAGTATCTCATGTCCTTCTAGAAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AACGTTGACCGCTCTGTCTCACGAAACTGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GAACTTTGTATCGTTTCTCTTTGCGCACGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACGTTAAACGTACACCATGCCGCACAGTCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC

Protein	Signature genes	Signature genes Name	Protein_function
CP029686.1\|AWR91719.1\|2229319_2229688_-\|YxeA-family-protein	unknown	unknown	gnl\|CDD\|377665
CP029686.1\|AWR91716.1\|2225280_2227023_+\|thiol-reductant-ABC-exporter-subunit-CydD	unknown	unknown	gnl\|CDD\|227321
CP029686.1\|AWR91727.1\|2241538_2241964_+\|NusG-domain-II-containing-protein	unknown	unknown	gnl\|CDD\|227646
CP029686.1\|AWR91733.1\|2250511_2251078_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
CP029686.1\|AWR91720.1\|2229917_2231084_+\|hypothetical-protein	unknown	unknown	unknown
CP029686.1\|AWR91717.1\|2227003_2228731_+\|thiol-reductant-ABC-exporter-subunit-CydC	unknown	unknown	gnl\|CDD\|227320
CP029686.1\|AWR91731.1\|2246926_2248765_+\|PTS-beta-glucoside-transporter-subunit-IIABC	unknown	unknown	gnl\|CDD\|273919
CP029686.1\|AWR91724.1\|2237189_2237495_+\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
CP029686.1\|AWR91718.1\|2228802_2229126_-\|hypothetical-protein	unknown	unknown	unknown
CP029686.1\|AWR91728.1\|2242160_2243852_+\|cytochrome-BD-biosynthesis-protein	unknown	unknown	gnl\|CDD\|227321
CP029686.1\|AWR91730.1\|2245617_2246475_+\|PRD-domain-containing-protein	unknown	unknown	gnl\|CDD\|170086
CP029686.1\|AWR91725.1\|2237491_2238169_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd12218_csn2_CAS-II-A	gnl\|CDD\|213411
CP029686.1\|AWR91732.1\|2248936_2250385_+\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|236580
CP029686.1\|AWR91726.1\|2240287_2241388_+\|peptidoglycan-binding-protein	unknown	unknown	unknown
CP029686.1\|AWR91722.1\|2232027_2236116_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|374653
CP029686.1\|AWR91734.1\|2251083_2251293_+\|acetyltransferase	unknown	unknown	unknown
CP029686.1\|AWR91735.1\|2251244_2252663_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
CP029686.1\|AWR91723.1\|2236306_2237212_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
CP029686.1\|AWR91729.1\|2243848_2245480_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
CP029686.1\|AWR91721.1\|2231084_2231879_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP029686.1\|AWR91719.1\|2229319_2229688_-\|YxeA-family-protein	gnl\|CDD\|377665	pfam06486, DUF1093, Protein of unknown function (DUF1093). This family consists of several hypothetical bacterial proteins of unknown function.	3.77702e-19
CP029686.1\|AWR91716.1\|2225280_2227023_+\|thiol-reductant-ABC-exporter-subunit-CydD	gnl\|CDD\|227321	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	0
CP029686.1\|AWR91727.1\|2241538_2241964_+\|NusG-domain-II-containing-protein	gnl\|CDD\|227646	COG5341, COG5341, Uncharacterized protein conserved in bacteria [Function unknown].	6.99799e-34
CP029686.1\|AWR91733.1\|2250511_2251078_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.93685e-11
CP029686.1\|AWR91724.1\|2237189_2237495_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.69699e-23
CP029686.1\|AWR91731.1\|2246926_2248765_+\|PTS-beta-glucoside-transporter-subunit-IIABC	gnl\|CDD\|273919	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	0
CP029686.1\|AWR91717.1\|2227003_2228731_+\|thiol-reductant-ABC-exporter-subunit-CydC	gnl\|CDD\|227320	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	1.31385e-158
CP029686.1\|AWR91728.1\|2242160_2243852_+\|cytochrome-BD-biosynthesis-protein	gnl\|CDD\|227321	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	4.89349e-93
CP029686.1\|AWR91730.1\|2245617_2246475_+\|PRD-domain-containing-protein	gnl\|CDD\|170086	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional.	4.4658e-35
CP029686.1\|AWR91732.1\|2248936_2250385_+\|6-phospho-beta-glucosidase	gnl\|CDD\|236580	PRK09593, arb, 6-phospho-beta-glucosidase; Reviewed.	0
CP029686.1\|AWR91722.1\|2232027_2236116_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	1.17826e-117
CP029686.1\|AWR91735.1\|2251244_2252663_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.43123e-65
CP029686.1\|AWR91729.1\|2243848_2245480_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	4.64472e-93
CP029686.1\|AWR91725.1\|2237491_2238169_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213411	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	7.08547e-78
CP029686.1\|AWR91723.1\|2236306_2237212_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	5.52602e-86

>CP029686.1|AWR91725.1|2237491_2238169_+|type-II-A-CRISPR-associated-protein-Csn2
MNLAYYPFQLITTKPSEVTVIDTASPKVLTDLIEALRNDLDKVVLSNDQLEPQEIRKASLWIGDPRLELDLDKLFQRLIYKRMELLIENQRLVELIDQSQQMAMDLIQDPFLSDLPVTVEPGGKLEQIMKYCNVHFDETVTTESTSKIEALIQTLTKLEEMKLVILTNVSHYLSARDFFAVTEQIGDTELQVVLIEFSKVNRRKYFEKCQYIYIDEDFVDSRELD
>CP029686.1|AWR91724.1|2237189_2237495_+|CRISPR-associated-endonuclease-Cas2
MRLMIMFDLPVLTSENRRNYRKFRKALINEGFLMMQYSIYVRVCSTKKSAEFLEHRIAAMKPPIGTVQTLMVTEAQYQAMHFLVGEAKQDIRNSADRTVII
>CP029686.1|AWR91723.1|2236306_2237212_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRSLIVTQHCKVTTKNRTLVVQTDSEVNNVPIEDINQVVFTTTRALLSADAITTLAEANAKVIFSGRDGQPVTETTNLYSDRRKADLVRLQVNWPKSLVENLWTKIVAAKVSIQAQVTKLCGYDNQSLLDDLDTLEINDHSNREATAARKYFKLIFGDDFSRSDICATNAALNYGYSILLSTTNRAIVSAGHITEIGMHHSSVANQYNLGSDLMEPFRPAIDYWVANQKFTDLTPNIKYGLIALLNLEVTFNGKKALLQNALDEHVENCLAYLDGKRNNCRIEVEFPNEVSSDAFNDHV
>CP029686.1|AWR91722.1|2232027_2236116_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MTKLGKPYGIGVDIGSNSIGFAAVDENSHLIRLKGKTVIGARLFEEGKAAAKRRAGRTTRRRLSRNRWRLSFLRDFFESHITPTDPNFFMRQKYSEISPKDKARYKYEKRLFNDRTDAEFYQQYSTMYHLRNRLMTDPSRADVREIYFAIHHILKSRGHFLTPGDAKDFNTNDVALDEIFPALQDAYAQVYPDLGITFDEDKANEFKTILLNEIATSIDTQRALVKLLLAEEDDKDILKQQKQVLTEFAKAVVGLKTKLNLALGTEVDSSEATAWNFSLGQLDDKWAGIESAMTDEGTEILDQIRDLYRARLLNGIVPTGKTLSQAKVDDYTQHHEDLQLFKAYLKQLEDDGTAKAIRQLYDRYIDGDDAAPFLRENFVKALTKDVTAHPNTKSPELLERLAQPDFMLKQRNKANGAIPVQMQQRELDQIIKNQAVYYDWLAAPNPVEKHRKSMPYQLDELLNFRIPYYVGPLVTAKEQKAAQGGVFAWMVRKDPEGNITPYNFDEKVDREASANTFIQRMKTTDTYLIGEDVLPKQSLLYQRYEVLNELNNVRVNNEKLSIEQKQQVIRELFERHNSVTIKQFAENLRAHGDYAHIPEIRGLADEKRFLSSLSTYRQLKSLLPEAIDDPAKQADIENIIAWSTVFEDAAIFKTKLKEISWLGSEAITKLSNIRYRGWGQFSRKFLNGLTLGNGHTIIQELLLSTNNLMQILTDETLQKKMTELNADKLKTANINDAIDNAYTSPSNKKALRQVLRVVDDIKRAADGQDPSWLYVETADGGGTPGKRTRARQHQLQEIYANAAHELIDTAVRGELEDKISDKADFNDRLVLYFMQGGRDIYTGAPLNIDQLSSYDIDHILPQSLIKDNSLDNRVLVHAIINREKNATFASTIYAQKMNATWRQWHEAGLISGRKLRNLQMRPDQIDKYASGFVARQLVETRQIIKLTEQIVAAQYPDTKIIAVKAGLSHQLREELEFPKNRDVNHYHHAFDAFLAARIGTYLLKRFPNLQAFFTYGKFTKADVKKLRGFNFIRDITHAEDKIVAKDTGEVVWDKQRDVDELDRIYNFKRMLITHEVRFETADLFKQTVYGARDSKEAGGSKQLIPKKKGYPVDIYGGYFRENTAYLAVVKVTKKTETIFKVVKIATSQVAALNKARSRSTAEELSVLTELLKPKFSKVGKNGKITDTPFEVVLPRVPREQLFYNAKYGFFMVNSDTMFHNFQEIWVSRSDQKILQQIRKAKIDYPNVDQDLDNLFHNLADQIVKYFDLYSIAGFKEKISQSQNTFNDLAVDDTDQSVGKITVINELLKGAQANGMTGSLKVLKISTPFGFTQDKSGVLTKDSSIIYQSPTGLFERSVRLTDL
>CP029686.1|AWR91721.1|2231084_2231879_+|hypothetical-protein
MEATKLAKRKQWPVPFSQTEPHFTFNNWLKFFSVVLFTYLLFYTRNPIGGFFNMSGTTFLNVANGWTRAVVVFGGVLYCAIIFAGAVWAAGWDGLSQLFASFRWRDIWYVFAYGVLYLIASTLGRILGDLVPIRFGVDFVNTLEAAQFGNLGAFSLISFRAFFMTLATQLTAVMIFLASQQLFSRLAIKHRRWALFLTYLLALAVTAVVTTTPLAPHVFVNIASGLVAQLPLYWVYRRSRNILVVTLSAFILMHVMIGLAVMLG
>CP029686.1|AWR91720.1|2229917_2231084_+|hypothetical-protein
MSRQNLMILIVDLVLIIIFIGGFGWGIGTVKRYQVEPNTSRTETNTDSLYSESRFEKTLQKFKRLDLMVRLGPVKDAKTFNYTPDEFNVKYSSQPIVSGLKATKTLNAETGEVEVCTTMTPQGVTVAGDYLLTTAYDHDGFHNSVMYIQDLKTGKLLNTVVLNGRPHVGGLTYDAKNDNIWICGRRNNAAEVFAIKLKTALTYNVDKKAKAVAYSQRAQLGNISRASFVTYYENALFVGFFNPTGKGNIQRYPLNDKGQVVGKSLTSSISNQFDVLTQSVLHQDILSKIQGMAFYGDYTILSQSYGGGNSTLYIFKTDPKKTIFRASDAIDTFDMPSHLEQISTHDGRMYMMFESAAYAYRHRSTNQLDRVLSMNLEGFVQLVLKEEK
>CP029686.1|AWR91719.1|2229319_2229688_-|YxeA-family-protein
MKKILIGIGIFIGLVILGGAGFYAWYTQSTPYYTQITTTGKKFDVIDDETGAARDIDYAYTQMAYDEKGHGTEVDFNGHKSRPLKMQAYLRLDYSTRRNQVISWEVVPKEKVPKAALAKLNR
>CP029686.1|AWR91718.1|2228802_2229126_-|hypothetical-protein
MTNEHKVLRGLSYISVIFAPILFPILVWIFTPQGSVTRDTAKHALWLHIIPTLLSIFIFMIIGGVGFFTNSINATSAVSLILLLVAMVVDIGMVVYNIYTGIKIITS
>CP029686.1|AWR91717.1|2227003_2228731_+|thiol-reductant-ABC-exporter-subunit-CydC
MHWLKNEHWVRPDLKRYRGLLVWSLILGVMTFVFAGALMFTSGFLIDKSATKPLFAAIYVTVVLTRAFGIGRPVFQYIERLTSHNWVLRITSHMRRKLYKVLETDAAFVSEHHQTGDILGLLADDIGHIQNLYLRMIFPTVVGAGLTVIATLLLGWFNWGFALWIMLLLLFQVLILPWWGLVVERFRKAEQKQLNHDAYVSLTDSVLGLSDWVITHREKDFMSQSLAAPKKLAASTVKSKRFQWRRDFVGQLLFVLIVISMLIWTNLEWTGNQASANWVGAFVLVVFPLDQAFSGIAQGVGEWPTYRDAIRHLNDLQPVTRQLPQQQAVPTQFKEMTLQHLSFQYTPKDPELITDIDLTVHSGEKIAILGPSGMGKTTLLQLVLGDLTPTTGNVLVDGQDVLTYQQHRTNLFAVLDQSPFLFNTSIVNNVRLGNEQASDADVAAALKAVKLDQLVAQLPNGINSSVEEAGFGFSGGERQRLSLARILLQDAPIVLLDEPTVGLDPITEQALLETMFTVLQGKTILWVTHHLQGVNQTDRVIFLEDGRLTMNDTPSHLAKNDERYQNLYALDAGLR
>CP029686.1|AWR91716.1|2225280_2227023_+|thiol-reductant-ABC-exporter-subunit-CydD
MIDKTLMRLSGMKRIMTMLAGFALVQAFVILLQGKFLAEGIVHSWNRQSLAGLWLPLGLFATAFVIRQLIVWVRNRIGARFAMTSSAWLQAQLLKHLYALGPAAVAKEGTGNLVTMALDGIPEAENYIELILNKILNMSIIPWVLVAYIWYENWLTGFTLLIMFPIIILFMVILGLAAQDKSESQYAGFQKMSNHFIDSLRGLKTLQLMGISRQYANNVYDVSEDYRKQTMGVLRIAMLSTFALDFFTTLSIAVVAVFLGIKLMDGAIPLYPAMVALILAPEYFMPIRDFGTDYHATLNGKNAMKAIWQVIDQPLPTDTNVLPAFSRWQAQDTVTINHLDFTYPNERAGIQDANLQFTGTEKVAIIGASGSGKSTLLNLIGGFLQPQKAAMTVRGTKVPHMTQAAWQDHLSYIPQDPYLFADTIAANIRFYRPDASDEDVKQAAEAAGLSHWIETLADGYATRIGEGGRGISGGQAQRIALARTLIDTNRSIWLFDEPTAHLDIETEAELKETLVPLFKNRLVIFATHRLHWLNQMDRVIVVDGGKIIAEGTPSELAAHSKPYQALVHEMRGEFNALVEK
>CP029686.1|AWR91726.1|2240287_2241388_+|peptidoglycan-binding-protein
MKKLIVLSATLLVSMGLAACSSGSSSSSSKSSSTTSQTSNAKVKINTGADASAKVPAAGTLVMRQLYAAPHGKQSFAAVNVTLNGDTIVSAKIDEFQYVKKSSDWTGVPNSNKDFGKSYPKGQFLIAKAENSKPYSALMKKEAKATHTWEENETAITNFVKGKKIEDLKADVAKVKDTKKVSDVVSGATFADTAGYLQAIYDAATTGMVAEGIQTTDNTITEGQVLAAPHGTQSFGIVTVAMQGDKIANVFLDEFQYMPSKDFGGVPNSNADFGKGIKSGTVLASKRANSEAYSAIMKSKGKATQTWQENSNAIDEFAKGKTIAELETAVSDLKGKKKVSDVVSGATFTDTSGYLTAIISAAKAAK
>CP029686.1|AWR91727.1|2241538_2241964_+|NusG-domain-II-containing-protein
MRWLKKYVRPFDYVIVIVLFVACFLPVGIFSLTEANVNTNQKVAVISINGHVKRRIQLTTHTRHQQFTLYPAKGQYNIIEVQGARIRDKEDNSPDQIAVHTGWISQVGQQSICLPHKLLIEIKPAQAGTGTSGDTGGLVHP
>CP029686.1|AWR91728.1|2242160_2243852_+|cytochrome-BD-biosynthesis-protein
MLGLLKYGRDQRWAGVIETVFDWLPTLLPIMIALNFAAKRPGNALIITVILVLIWLGYVIGYERHHRHAWAMSAKRELRDHYFEALYQRNNAGDATAADNAVIQRDLGGLNNLDMFYSTLFPTLIQAGLTFLLLIGLSVWYGSWLAFLPLACVFLIGFAMMFLGKKMSAQNKAHLAGFLRMGGRFMNDLSGMNTLVMYNAADRYAKKFADDSEYFRQATMNLLRTQLQVLFVINGFVYLTVFAGGFVTALQLAAGQLPAAGAFATWFALAMMMVNARQLGYFFHVVKSNGPALAGILATIAKSKTTPATVKITDNRPLKQLVLQDVAIGYEADAPLVSDINATLVPGKLYGLAGENGTGKSTLTQALLGQLTPLSGTIMADNTPVTALSNAQRAAVFGYVAANDYIFSGTIKENLLLGNQFGDQWQQHLDELGLMHFVTDLQDGYATEVGEGGRLLSPGQRQQLAFARMLLADKTVYLLDEMTSSIDAANAAIILAAIKRLSRQKIVLFISHDLSAMAEADVVWFIHDHQLISADHAQLYRDQPAYRHLVDNPEAMLKEGQPS
>CP029686.1|AWR91729.1|2243848_2245480_+|ABC-transporter-ATP-binding-protein
MIRSLLRYTHHLTGAIIISFLIGLVAELTKVVVLVLAAMMLFDPQNASHLLIPGIIAVVIVGLGSFGEQYAGHFVAFHVLAELRGAVYRKLVQLAPAKLDSQGSGKLLKLIGSDIEAMEIFYAHTIVPVAIGLIYGVLMVAVYSSLNGPAAAVVLVSYAAVGLLIPYYRHEQMTAKAQAADRQKAVNQQYLLESVRGMAVLRQLEVADARMKTGNEGFDHEATAFQQSQFGQLLKNMSATLVILVAWLFIVWLSGWTQPQPLQQALLAVFPLTFGPLLALTNLPASLLNGFAAARNLLNLLQEAPATSAAIDATQTLDQIATIQVDHVTFKYPSRDETVLRQVSLSLHAGEIVGFVGASGSGKSTLAKLIMGWYPLTQGRILIDGIDLTKIDPASLRAQVNYLPQTPVFFSESVRDNLTLHDSTITDAQIWTVLDQVKLTSRLRQAEKGLDENVVSGQLQFSSGEQQRLELARALLHPSSVLVLDEPTSNLDTENERLILDAIKAYYHGIVIMISHRAESAAYADRLYRFADHRVSAASTAPK
>CP029686.1|AWR91730.1|2245617_2246475_+|PRD-domain-containing-protein
MIIQNVLNNNAVVARHQQREVIVVERGIGFRAKKDAKMALRDSMKVYVPEDQAKLKIATATIASLPSAYLDLAAGIIQEAEKRLQTTFNSYLLIELADHVHFAVQRLHEKIVLHNKLLWEIQVAYTQEYEMGEWALHQIAAQLHEQLPEDEAGFIALKFVSNDLNHQQTVNSLAFTQTLASLTKIIFYNLGLDMNVKTPDYQRLVIHLKFFLQRMYAAAPSPLSLKMENYDYVLLKHLQQDYARAYHCMEDVDRFMQQKLAIAIPKNEQIYLTMHIARLAKSLAE
>CP029686.1|AWR91731.1|2246926_2248765_+|PTS-beta-glucoside-transporter-subunit-IIABC
MNESGLAQQLLNLIGGKQNINQVWHCATRLRFTLKDRAKVPKDKIEALDGVITVVEASGQFQVVIGNNVGDVYHEVVKLEPSLSEGETSGETAAQGKMTFKSAFNSLLTFISGVFTPFLGAMAGAGILKGLLSLAVVMGWLTAKSGAYQIWWAAADGIFYFLPIALAFTAAKQLKVNQFVSMAIAAAMVSPGIVALGAKATTIDFFGIPVVPANYTATVLPILLVVVVQKFLEPVFNKLWHESVRNIMAPLCLLVVIVPLTLIVVGPISATVSSWLATAIVSLNKSVPILAGLVLGGFWQVIVIFGVHWALVPVMMNNIAQNGTDLMMPILLPAVLSQAGAALAVFLRTRDAKMKSLAGSSTITALFGITEPTIYGITLKLKKPFYLACVAGAVGGMIVAISGAGANAAALASVLSLPTFIGKGFGLSVVGDVVAFALGTVLTYFFGGINAGAKTKTAPSANSELGEALAAPVKGVLVPLTGLADEVFASETMGKGVAIVPENGIVKAPVAGVIRLLYPTGHAIGIHSDKGSEILIHIGIDTVNLKGKHFQPLVAQGQHVEIGMPLVQFDHEAIEKEGYESTVMMIVTNSDQYQIATLGQGATDDRPVMTLA
>CP029686.1|AWR91732.1|2248936_2250385_+|6-phospho-beta-glucosidase
MTYLNFPKNFLWGGATAANQLEGAYQEDGKGLSVADVLPQGKDRFAIVNRPDFNWTIDKSKYRYPNHQGIDHYHRFKEDIKLFSEMGFKCYRFSIAWSRIFPEGDEKTPNASGLKFYDEVIATCLKYDIEPVVTISHYEMPLHLVTKYGGWKNKRLIEFYKHFAETVLTRYFKQVKYWMTFNEINSAWAFPVMSQGLVANNGGNDKQTIFQAWHNQFVASAWAVKIGHALDPKLQVGCMLLYATTYSYDANPVNQLATLQQNQAFNFFCGDVQVRGEYPAYTDALMADNGFKFTDLNFSAEELTLLKNHPVDYIGFSYYMSAVVETVEKEHAEVGGNLLSGVKNPFLKASEWGWQIDPIGLRIALNQLYERYRKPLFIVENGLGAVDKPDADGKIKDDYRIDYLKQHIEQMGAAIHDGVDLMGYTPWGCIDLVSASSGQMSKRYGFIYVDLDDAGQGSLNRYKKQSFNWYQRVIASNGTDLG
>CP029686.1|AWR91733.1|2250511_2251078_+|TetR/AcrR-family-transcriptional-regulator
MDTREKLVATAASLFQKEGVRATGLAQILTVSGTPKGSLYYYFPNGKAQLIEAAITYAGQHILEHVQRDLDRYKAPDAALAGQLESMATEMQEKGHLGGNSISLIALETGDDPELQAACSAVFTQLETLYIKKLTSAGIPPDRAQPLGQFIQASIEGAIILAATKDNPDLLRQTADQLTRLIKLALAA
>CP029686.1|AWR91734.1|2251083_2251293_+|acetyltransferase
MPVVCFYHLTRSPAQQPACKDLGRNGQSATITPKATYTPVANRAGSRSLKRKLSCNYHKQKKCRKLAFT
>CP029686.1|AWR91735.1|2251244_2252663_+|MFS-transporter
MQLSQTKEMPQARVHVAHPAMAMIGLMIGAFVGMFSETSLNIALPSLMTALNVSQGTIQWLVTGYMLVIGICMPLSSLLSKWFNTKKIILFALGAFILGSVVSAMGAVFPVVLIGRLIQGIGTGLILPLMFSVAMQIFPPYKLGTVMGMAALVIMFAPAIGPTITGLVLAKFTWHYIFWLFVPFLVLAFIFTLTSMENVYQQTQTPVDWLSIVESSIGFAGIVVGTTMASDAGWLSLEVGLALLVGVIGLVLYARRQLSLTNPMLNLRVFANKQFTVGTLLVMLDFGVILASMYLLPMYLQRVMGLPVAMTGLVMLPGGIVNAAVSAIAGRMYDSHGAKWLSRGGFVIAILGVLILLNSGAQSPLWWIILGHVVLMIGAPLAMSPAQTYGLNSLSGAESADGSALLNTLQQIVGAVSTAVATSMLALGSAKAAGQTGLTIGSHFGFMFVLILAIIGLIVAFQVKKPQASRDL

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Crispr_ID: CP029686_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029686_3

2656652-2656772

Orphan

Consensus_repeat	Method
GGTTTCTGGGGTGGCGAACGCGTTTAGAAACCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029686_3

>merge|CP029686|3|2656652-2656772|CRISPRCasFinder
GGTTTCTGGGGTGGCGAACGCGTTTAGAAACCGTAGTGTAAGTGGGATGGCCGCACAATGGTCATTGCGACCAAGGCCCTTACACGTTGGTTTCTGGGGTGGCGAACGCGTTTAGAAACCG

>CP029686|3|3|2656652-2656772|CRISPRCasFinder
GGTTTCTGGGGTGGCGAACGCGTTTAGAAACCG	TAGTGTAAGTGGGATGGCCGCACAATGGTCATTGCGACCAAGGCCCTTACACGTT
GGTTTCTGGGGTGGCGAACGCGTTTAGAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
CP029686.1\|AWR92103.1\|2661992_2663174_+\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|180261
CP029686.1\|AWR92106.1\|2665939_2667694_+\|pyruvate-oxidase	unknown	unknown	gnl\|CDD\|213733
CP029686.1\|AWR92091.1\|2648859_2651520_+\|cation-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319781
CP029686.1\|AWR92093.1\|2653570_2654470_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226605
CP029686.1\|AWR92098.1\|2657676_2658816_+\|M20-family-peptidase	unknown	unknown	gnl\|CDD\|349944
CP029686.1\|AWR92102.1\|2661348_2661648_-\|hypothetical-protein	unknown	unknown	unknown
CP029686.1\|AWR92104.1\|2663185_2664466_+\|hydroxymethylglutaryl-CoA-reductase,-degradative	unknown	unknown	gnl\|CDD\|153082
CP029686.1\|AWR92105.1\|2664449_2665616_+\|hydroxymethylglutaryl-CoA-synthase	unknown	unknown	gnl\|CDD\|213655
CP029686.1\|AWR92580.1\|2643684_2645148_+\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236426
CP029686.1\|AWR92096.1\|2655801_2656266_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP029686.1\|AWR92092.1\|2651656_2652094_+\|hypothetical-protein	unknown	unknown	unknown
CP029686.1\|AWR92101.1\|2660517_2661348_+\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
CP029686.1\|AWR92100.1\|2659806_2660370_+\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|377369
CP029686.1\|AWR92097.1\|2656992_2657598_+\|ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|227029
CP029686.1\|AWR92099.1\|2658875_2659694_-\|aldose-epimerase	unknown	unknown	gnl\|CDD\|185696
CP029686.1\|AWR92095.1\|2655356_2655809_+\|SprT-family-protein	unknown	unknown	gnl\|CDD\|235290
CP029686.1\|AWR92090.1\|2647394_2648552_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
CP029686.1\|AWR92088.1\|2645151_2646345_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
CP029686.1\|AWR92089.1\|2646347_2647175_+\|NAD(+)-synthetase	unknown	unknown	gnl\|CDD\|234831
CP029686.1\|AWR92094.1\|2654462_2655215_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224026

Protein	Function_ID	Function_description	E-value
CP029686.1\|AWR92106.1\|2665939_2667694_+\|pyruvate-oxidase	gnl\|CDD\|213733	TIGR02720, Pyruvate_oxidase, pyruvate oxidase. Members of this family are examples of pyruvate oxidase (EC 1.2.3.3), an enzyme with FAD and TPP as cofactors that catalyzes the reaction pyruvate + phosphate + O2 + H2O = acetyl phosphate + CO2 + H2O2. It should not be confused with pyruvate dehydrogenase [cytochrome] (EC 1.2.2.2) as in E. coli PoxB, although the E. coli enzyme is closely homologous and has pyruvate oxidase as an alternate name. [Energy metabolism, Aerobic].	0
CP029686.1\|AWR92091.1\|2648859_2651520_+\|cation-translocating-P-type-ATPase	gnl\|CDD\|319781	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp. strain PCC 7942 PacL and Listeria monocytogenes LMCA1. Ca(2+) transport ATPase is a plasma membrane protein which pumps Ca(2+) ion out of the cytoplasm. This prokaryotic subfamily includes the Ca(2+)-ATPase Synechococcus elongatus PacL, Listeria monocytogenes Ca(2+)-ATPase 1 (LMCA1) which has a low Ca(2+) affinity and a high pH optimum (pH about 9) and may remove Ca(2+) from the microorganism in environmental conditions when e.g. stressed by high Ca(2+) and alkaline pH, and the Bacillus subtilis putative P-type Ca(2+)-transport ATPase encoded by the yloB gene, which is expressed during sporulation. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
CP029686.1\|AWR92093.1\|2653570_2654470_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|226605	COG4120, COG4120, ABC-type uncharacterized transport system, permease component [General function prediction only].	4.77747e-94
CP029686.1\|AWR92098.1\|2657676_2658816_+\|M20-family-peptidase	gnl\|CDD\|349944	cd08659, M20_ArgE_DapE-like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like. Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE) like family of enzymes catalyze analogous reactions and share a common activator, the metal ion (usually Co2+ or Zn2+). ArgE catalyzes a broad range of substrates, including N-acetylornithine, alpha-N-acetylmethionine and alpha-N-formylmethionine, while DapE catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelate (L,L-SDAP) to L,L-diaminopimelate and succinate. Proteins in this family are mostly bacterial and have been inferred by homology as being related to both ArgE and DapE. This family also includes N-acetyl-L-citrulline deacetylase (ACDase; acetylcitrulline deacetylase), a unique, novel enzyme found in Xanthomonas campestris, a plant pathogen, in which N-acetyl-L-ornithine is the substrate for transcarbamoylation reaction, and the product is N-acetyl-L-citrulline. Thus, in the arginine biosynthesis pathway, ACDase subsequently catalyzes the hydrolysis of N-acetyl-L-citrulline to acetate and L-citrulline.	1.94339e-127
CP029686.1\|AWR92104.1\|2663185_2664466_+\|hydroxymethylglutaryl-CoA-reductase,-degradative	gnl\|CDD\|153082	cd00644, HMG-CoA_reductase_classII, Class II hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR). Hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR), class II, prokaryotic enzyme is a homodimer. Class II enzymes are found primarily in prokaryotes and Archaeoglobus fulgidus and are soluble as they lack the membrane region. Enzymes catalyze the synthesis of coenzyme A and mevalonate in isoprenoid synthesis. Bacteria, such as Pseudomonas mevalonii, which rely solely on mevalonate for their carbon source, catalyze the reverse reaction, using an NAD-dependent HMGR to deacetylate mevalonate into 3-hydroxy-3-methylglutaryl-CoA. Human and bacterial HMGR differ in their active site architecture.	0
CP029686.1\|AWR92105.1\|2664449_2665616_+\|hydroxymethylglutaryl-CoA-synthase	gnl\|CDD\|213655	TIGR01835, 3-hydroxy-3-methylglutaryl_CoA_synthase, 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.	4.76524e-156
CP029686.1\|AWR92580.1\|2643684_2645148_+\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|236426	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated.	0
CP029686.1\|AWR92096.1\|2655801_2656266_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.67331e-15
CP029686.1\|AWR92088.1\|2645151_2646345_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	8.24724e-43
CP029686.1\|AWR92101.1\|2660517_2661348_+\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	2.188e-08
CP029686.1\|AWR92100.1\|2659806_2660370_+\|restriction-endonuclease	gnl\|CDD\|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	1.30041e-36
CP029686.1\|AWR92097.1\|2656992_2657598_+\|ECF-transporter-S-component	gnl\|CDD\|227029	COG4684, COG4684, Predicted membrane protein [Function unknown].	7.14562e-17
CP029686.1\|AWR92099.1\|2658875_2659694_-\|aldose-epimerase	gnl\|CDD\|185696	cd09019, galactose_mutarotase_like, galactose mutarotase_like. Galactose mutarotase catalyzes the conversion of beta-D-galactose to alpha-D-galactose. Beta-D-galactose is produced by the degradation of lactose, a disaccharide composed of beta-D-glucose and beta-D-galactose. This epimerization reaction is the first step in the four-step Leloir pathway, which converts galactose into metabolically important glucose. This epimerization step is followed by the phosophorylation of alpha-D-galactose by galactokinase, an enzyme which can only act on the alpha anomer. A glutamate and a histidine residue of the galactose mutarotase have been shown to be critical for catalysis, the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. Galactose mutarotase is a member of the aldose-1-epimerase superfamily.	5.64258e-24
CP029686.1\|AWR92095.1\|2655356_2655809_+\|SprT-family-protein	gnl\|CDD\|235290	PRK04351, PRK04351, SprT family protein.	5.42742e-83
CP029686.1\|AWR92090.1\|2647394_2648552_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.83637e-45
CP029686.1\|AWR92103.1\|2661992_2663174_+\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	1.47814e-180
CP029686.1\|AWR92089.1\|2646347_2647175_+\|NAD(+)-synthetase	gnl\|CDD\|234831	PRK00768, nadE, ammonia-dependent NAD(+) synthetase.	0
CP029686.1\|AWR92094.1\|2654462_2655215_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224026	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only].	7.00008e-96

>CP029686.1|AWR92096.1|2655801_2656266_-|GNAT-family-N-acetyltransferase
MLREAQFIDLGAIVHLYQQLTAEMATMAPETYRPLTSDNRQYFADYLQNDLARLFVTETAGTLSGFALVVLARTGDNAEFVPQHFAQLIDLYVIPAQRHQGLAKQLMDAVTAFAKSHDATFIQLNVLNANQTAQQVYAKAGFEPVSLIFQKPLN
>CP029686.1|AWR92095.1|2655356_2655809_+|SprT-family-protein
MTDQELQARVEAISLKAFHQPFRHHAVFNNRLKTTGGRFHPADMNLDFNPKLFAVYPASVTDGIIKHELVHYHLYDHHRGYQHRDHDFKQLLTAVGGSRFAPPLPVNGHQYVYVCTHCGRQFVRRRHIDVRRYACGVCRGKLRLQKTLAS
>CP029686.1|AWR92094.1|2654462_2655215_+|ABC-transporter-ATP-binding-protein
MAELTLTNVTVNIPVGTEVKTLLQDVNLTVAKGEFLTVLGNNGAGKSTLFNAITGDMPVSGGTITLADQTLNGKRPEQRARHIARVFQDPKMGTAPRMTVAENLLLASHRGQRLTLRSRGMTASKAALKTLAAKTGNGLADALDKPTEQLSGGQRQALSLLMATMRKPDLLLLDEHTAALDPHTSQAIMQLTNEIVSDQQLTCLMITHQVEDALRYGNRLIVLDAGKIVADFDQAKKAAMSRDDVLAFFS
>CP029686.1|AWR92093.1|2653570_2654470_+|branched-chain-amino-acid-ABC-transporter-permease
MSIGVSAIGQGLLYGLIGLGLFLTFRVLDFPDMTVEGTFPFGAALAVSAITHGISPIVATLLATGAGMLAGLATGLLTTKGKIPVLLAGILVMTGLFSINLRIMGRANLSLLHQANLFQTAFLKDLPPYFNSVVIGVIVAVVVVGLLMLFLNTQLGQAFIAAGDNPSMARSLGIDPDHQMVLGLMVGNGLVGLAGGLLAQNNGYADVNMGIGIIVIGLAAIIIGEVVFGELTLSQRLVAVILGSILYRFVLLVVLALGFNADDLKLISAVVLAIAIMVPQIDHRLRLRRVLQKGVQAHG
>CP029686.1|AWR92092.1|2651656_2652094_+|hypothetical-protein
MNKQQMKLANYGTTINAVVEATQDNQEKMAPLFEPLRKAIDENKLADYDLEAYQQTQTVFSEGTSNYEALLVKLQQVAAPARLLGPHHTLVRDFAAFTEACKAMTASLHADRQVDVAAFNAAEKAQDEAIQKFTKQIQKISVMLS
>CP029686.1|AWR92091.1|2648859_2651520_+|cation-translocating-P-type-ATPase
MANKPPYALSSEAVLKQEQTSLTGLTKEAAQTRLNENGPNELAQAEKKGMLARFLDQFKDFMIIVLLVAALIAGFLLSEWADAGIILAVVLLNAVFGVFQESKAEEAIDALKEMSTPNAHVRRGDQVLTIPSSQLVLGDIVLLEAGDVVPADLRLVESANLKIEESALTGESVPVDKTTAPLDADDVGIGDRTNMAFMNSNITYGRGVGVVIATGMQTEVGRIAGMINSAEETNTPLQENLKSLGKTLTVMILVIAVIVFAVGIWRQAASLPEMFLTAVSLAVAAIPEGLPAIVTIILALGTQKMAKRHALVRKLPAVETLGSTDIIASDKTGTLTQNKMTVEKVYYDGQLNDASAGIHGGNPLMTIMNFANDTQVQDDGKLLGDPTETALVAYGKTQNYDVAKALTGEPRIAEVPFDSERKLMTTVHRRADGKLLVATKGAPDELLKRVTDLATGENTAPLSDSERDAILKANKDMATQALRVLGMAYKVIDTLPEKVDSDTVENHMIFAGLVGMIDPERPEAEAAVAEAKAAGIRPMMITGDHRDTAEAIAVRLGIIDQGDDDAVITGAELDQQSDDEFAKNVAKYSVYARVAPEHKVRIVNAWQKKGKVVAMTGDGVNDAPALKAADIGIGMGITGTEVSKGASDMVLADDNFATIVVAVEEGRKVFSNIQKAIQYLLSANLGEVLTLFMMTMLGWDLLAPVHILWINLVTDTFPAIALGVEPTEPGIMKQKPRGRKSNFFSGGVGPAVIWQGILEGLLTLGVYWIAITYPVHSGSAAIHADALTMAYATLGLIQLFHAFNVKSIHQSLFTVGAFRNKAFNWAILASFVLLAVTILVPGFNGLFHVTSLDWHQWITVLGAGVAMIVIVEIVKVFERARRKQRA
>CP029686.1|AWR92090.1|2647394_2648552_+|serine-hydrolase
MSGKHRYIWLGVMLILCAVSIGAGTYLWQQNSRSAVNTKAKSAKTVTKVVRQDRGKSKEEILAMTLDRAATTTEGQPLEQELTNDKFIGSALIIKHGKVVFNNGVGDADTTTHRRNGPTTLFQIGSIQKAVTAVALAQLAASGKLSLDDPVGKYLTGIKTGDQVTLRMMVAMRSGFSLRRYQPTVMDDANIIQWSIANLTYLPQDNYAYQAVNYVLLAGVIEKVAGRSYEQQVKNNIFDRLNLKHTGFLPAMLTDPERAITYTGPAANPYQTAIGEPAVWYNRELGTGNVYTSTGDLYRLLRGIDTGKVLSLSTLKTLRNRNDGVYNAGIYNHADFYSTNGVVAGQMASTAISHDGQNAVILLSNYNSHALNLHDLAVHLFSELG
>CP029686.1|AWR92089.1|2646347_2647175_+|NAD(+)-synthetase
MRPLQAEIIKALGVQATIDPETEVRRSVDFLKAYLKKNTFLKTYVLGISGGQDSSLAGALTEKAMQEMRAETGDDAYQFIAVRLPYGEQADEADAMAAIDFMHADVVKRVNIKPSVDAMVAAVEADGSKISDFNKGNIKARMRMIAQYAIAGNNAGAVIGTDHAAEAVTGFYTKFGDGGADLTPLYRLDKRQGAALLKVLGAPAHLYEKAPTADLEDNRPALPDEVALGVKYKDIDDYLEGKDVSDQAAETIEKWYQKTAHKRHLPITVFDNFWK
>CP029686.1|AWR92088.1|2645151_2646345_+|serine-hydrolase
MRASKRRSQHRWLILSLLVGLVVGIAAYASYDHFYLKPQIEAKEERTRRKYEIELNRHRAVEQRLQNETRTATSATDKLMQPVNQAEAKPFMKILEANHFSGTALMIRRGKIILNTGLGYADAESGRLNGPETLYQIGSIQKGLTAVLLMRLVEQGKVHLSDPISKYLTGIRTGKQVTLRMMLNMRSGLSLTRAQSASLSDAGIVRWSIANLNYGTVRYDYQPVNYVLLAGVIEKVTGRLYADLIQQEIFKKLKLTHSGFMPELFHESNQAFGYSGPINNPYAKRYTEPSVNYNRELGTGNIYTSAGDLYQIIKAVNQGKIISTASLKALRNLDNGQYTAGVYNFGGYTLTHGVVASQSAGTMIDTSGQNAVVLLANTDKITQGLIKNLYLNMIKGV
>CP029686.1|AWR92580.1|2643684_2645148_+|nicotinate-phosphoribosyltransferase
MTTQLGEGLTLHTDFYELNMMNTFFEQGISERNAVFEVFFRDLPFGSGFAVFAGLEHVMDYLNHLKFSEDDLAYLQSQTDYSDAFIDYLRHLKFTCTVKSALEGDLVFNNEPIWQIEGPLAQAQLVETAVLNMINYQTLVATKAARIRSVAGADPLMEFGTRRAQETAAALWGTRAAYIGGFNATSNVLAGKEFGIPISGTHAHSLVQAYGNDYDAFKAYARSNKDVVFLVDTYDTLRSGVPAAIKVANEFKGKINFLGVRIDSGDMAFISKRVRQQLDDAGYESAKIYASNDLDENTIQNLKMQGAKIDIWGVGTRLITAYDQPALGAVFKLVSIEDAAGKMRDTIKLSNNAEKVSTPGKKQVWRITRQDDGKSEGDYVALADETIDTQRSLYMFHPNFPYINKTVKNFEAKPLLQTIYDKGQQVYHTPPLQEVQAYATRSTNALWDEYRRILNPQDYPVDLSQRVWDNKMDLIKAVKSAVADREE
>CP029686.1|AWR92097.1|2656992_2657598_+|ECF-transporter-S-component
MTQRGKAYNIAIIGILGALIILQAYIPMVGYVQIFPAWPAISTIHLTVIIGGIVLGYGGGASLGLLWGLTSLIRAYTSATDPVTLLLFRNPIIAIVPRVMVGLVAAFIFHQLFKKKQTPLAQTVKMVFAGVVGALTNTLLVIGFTWLMFASKAAQIVPGADATNLGWLLMTALAINAVAEALLGGIVTPILGHALLRFRRK
>CP029686.1|AWR92098.1|2657676_2658816_+|M20-family-peptidase
MTEEEQVVDLLSAMVKIPSVAAKEGQVADLIETFLAPELKAGLIKRERISYAPGRDNLVLTIGNPNAQRWLGVDGHMDVVDPGNVNKWQFPPFSAHVEDGKLYGRGATDMKSGLAAAVVAFKQAAHEKLDHGIQLMATVGEEVDNDGARQLSAAGYGDRLTGLLVAEPGNSNVDAAERGIIDYTLTAHGKAAHSSRPDLGANAIHGLFAFANAALTATAPLQAKEDPILGHATHNIDIIHGGNQINSIPESAYLRGNIRTTMIADNDAFIAALKQAAKTTVPKGVRLSLSIDSVLGAAAASPDNDLIQLVQTARQRAGLNRGQVAYRTGITDAALFYHDGLDLAIYGPGNETSHETDEYVTLKDVFDSVKVFKDVFMNY
>CP029686.1|AWR92099.1|2658875_2659694_-|aldose-epimerase
MQLSAKIFAKVGSERITQYSLVNDHQMTLRFLTFGARVQQVRLPNAAGDDPNLLLGFVTLEDYLHQPGYLGAFTGPLQAADAELAPGSWQNWNWAVKTSQETDLAITFTLTLPENADGQPGQRELSITHRLTNDNLWQIDMQVATTADLKIHPRLNLPWMLTADPAQTMLSAKLTADEHVTPVPKTARCETAQRYSLAAADWQLAYLSDASFTRIDSYAGINSENNFNGILGQPNVAVGFSPEMNQDALPWVLPAGTTWRHHAEFHLSSNAN
>CP029686.1|AWR92100.1|2659806_2660370_+|restriction-endonuclease
MRTLLKKAYQLLWGLFILALAYSFWARSFLPRQLRQYGDPASFGIISLFVVINAIMLYHHHFRFRDLKMETVDIMEGEKFESFCAYLLKRNGFNHIQLTQASGDQGIDIIARKKGKTIGFQCKRYTGFVGNKAVQEVWAGHHFYQLDEAAVITNSEFSDSAIALADDLGVMLIDRKKLRRLMRRLPS
>CP029686.1|AWR92101.1|2660517_2661348_+|sugar-phosphate-isomerase/epimerase
MLLGLKASTDQRQIRDRLQYHPDVFEFHLTENDFTEAGWSHFVQMAALVQSLVPTVVFHHPMRFRGQRNELAMNPTKYPTRYDFLMTSSVKLMNFAKKANATALIHGGYRVDTPGDYAGWTDVGKAQDVALARMIAFAQEAPGHVVFENSMSPIFRYGDPTFEDRLLRWHLPLAYDTSHTFIVLHGDNDRLMASLAHLRPLIRHYHLVDSMGQTHDSLPLGRGRIDWARVLPLLNQNASRIYEIGLKDQFDCREMIESHHYLESVAKRLAATKHPA
>CP029686.1|AWR92102.1|2661348_2661648_-|hypothetical-protein
MRVTDLLALLADQNKNASVLLDTKPTPSRFDDFKLTTVNDQPQLVFQPNPERKAALRVWELQLLLNQPDLQQRFVYLADVDEPRALFGFVKRQIGLLLN
>CP029686.1|AWR92103.1|2661992_2663174_+|acetyl-CoA-C-acyltransferase
MEEVVILSAKRTPIGKLGGDLAGASAVDLGVAAAQAAIKAARIDPALLNQAIFGNVMQAGSGQNVARQIGLKSGMATSSTAMTVNEVCGSGLKAVRLGQAAIQLGEADAVLVGGTESMSQVPYYAEAVRSGHKFGDTTLVDGLSRDGLNDAFSQQPMGITAENVATQFNVSRQEQDEFALRSHLRAAAAAAEGRFKSQIAPVTIAARHGDVIVDRDSAIRPDTSLAKLAQLPPVFEVGGTVTAGNASGINDGAAALILMAKSKAEQLGLHYLATVTGFAEVGIDPAIMGYAPKLAIDKILQATGGSIAAIDQIELNEAFASQSVAVARDLGLKDEQFNINGGALALGHPLGASGARILISLLYDLAERNQRQGIAALCVGGGIGIAMQIAMHV
>CP029686.1|AWR92104.1|2663185_2664466_+|hydroxymethylglutaryl-CoA-reductase,-degradative
MKFYELSPEKRRDQLVQEGWLTTQDAALLAGTHSLPEVTGARLIENAIGEFPLPLGVARNLLVNGQLHQVPIADEEPSVIAAASNGARLATANGGVRTHVAAHRVVAEVVLTNLTDLVQARQTILAHQTDIQKVIAVAHPSMIQRGGGLDQLTVESLGAQFLKIRLTLDPQQAMGANYANTVAEAVAAAVTSWVDGDVLVSILTNAPTELVTAEVSLEPVSLATKAVSGDVIAKKIVQLSDLAFVDAERAVTHNKGILNGIIGAVLATGNDTRAVAASIGAFACASGRYQPLSRWYMDQGHLVGHLQLPLPMGAVGGAIGALPMAQVVRRLGGYQNLAIMQQVIAALGLVQNLAAMRALAGPGIQAGHMKLQANALAIAAGATETELPMLVNALRQGSMDLKHAQQYLTTIRLNKKVGQSKDENRD
>CP029686.1|AWR92105.1|2664449_2665616_+|hydroxymethylglutaryl-CoA-synthase
MKIGIDAIAMDTPDFYVDLVKLAQVRGDDPDKYTIGIGQDEQAVPPSSQDIVTMGANAATKLLTPAIRASLGMVLVGTESGVDASKSAALFIHDLLALPEWVRAVELKEACYGGTAALMMARDYIAAHPDKTVLVIAADIARYGLATAGEVTQGAGAVAMLIKAEPHIMTIEDDSVYRSESIDDFWRPVYQDTAIAQGKYSTEQYLAFFQAIWSRYQTQRHHTASDFAAMTFHLPYTKMGKKALKLVLPDTDEATGERLQRRFEASTRYCRRVGNIYTGSLYLGLLSLLDNDTSLKAGDRIGLFSYGSGAVAEFFSGILQPDFAAQLHAANHAKMLADRQELTVPEYEAVFSDKVPYDPEDYRSDPTYYHGQFVLTGVIGQERQYQQR
>CP029686.1|AWR92106.1|2665939_2667694_+|pyruvate-oxidase
MTEKINAADAMIKVLEDWGIHNIYGLPGGSFDSTMNALYNRRHTINYVQVRHEEVGALAAAGEAKVTGRIGATFGSAGPGAVHLLNGLYDAQYDNVPVLALVGQVPTAAMNTNYFQEMNENPMFADVSVYNRTAMTAEQLPHVVDEAIRQAYKHNGVAVVTIPKDLGWTQIDDNYVSSANLYQKPLLPDPDPDQVAAAWDILKDAKKPILYVGNGARGARDEIIAFSEKTHIPIITTALAKGIVPDDYKANMGSAGRVASKPGVEVARGADTVLFLGSDFPFQPYFIAPNAKYIQVDIDGSKFGRRHTVDLAVLADAKKFIKALSEKADQLPESAWYRAALANKENWREWMTSFEDDGSTPLRVEPIFKLINEMAEKDAIFQVDVGNVTINGMRYLKTNDDQVFTTSGWYATMGYALPAAIGAQAEFPDRQVWSISGDGGFAMVMQDILTQVKYHMPIINVVLTNESLGFIEAEQDDTQQPHSGVDLIDADYGKAAEALGAQGFEVHNLDELKAAFAKAKDRKGPVVIDVKISDLRPIPVEQLVLDKQTQDPAAVDAFVKKYHAESLIPFRQLLEDAEKPVTNA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP029686_2	2.2\|2238296\|30\|CP029686\|PILER-CR,CRISPRCasFinder,CRT	2238296-2238325	30	NZ_CP022955	Lactobacillus paracasei subsp. paracasei strain IBB3423 plasmid pLCAKO.1, complete sequence	5872-5901	2	0.933
CP029686_2	2.4\|2238428\|30\|CP029686\|PILER-CR,CRISPRCasFinder,CRT	2238428-2238457	30	MT773556	Myoviridae sp. isolate BML_4 genomic sequence	200957-200986	6	0.8
CP029686_2	2.5\|2238494\|30\|CP029686\|PILER-CR,CRISPRCasFinder,CRT	2238494-2238523	30	CP000662	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence	787988-788017	6	0.8
CP029686_2	2.5\|2238494\|30\|CP029686\|PILER-CR,CRISPRCasFinder,CRT	2238494-2238523	30	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	170192-170221	7	0.767
CP029686_2	2.5\|2238494\|30\|CP029686\|PILER-CR,CRISPRCasFinder,CRT	2238494-2238523	30	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1643071-1643100	7	0.767
CP029686_2	2.5\|2238494\|30\|CP029686\|PILER-CR,CRISPRCasFinder,CRT	2238494-2238523	30	MG757157	Gordonia phage Flapper, complete genome	3335-3364	7	0.767
CP029686_2	2.6\|2238560\|30\|CP029686\|PILER-CR,CRISPRCasFinder,CRT	2238560-2238589	30	MN693516	Marine virus AFVG_25M345, complete genome	20383-20412	7	0.767
CP029686_2	2.8\|2238692\|30\|CP029686\|PILER-CR,CRISPRCasFinder,CRT	2238692-2238721	30	NZ_CP018229	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence	347900-347929	7	0.767
CP029686_2	2.8\|2238692\|30\|CP029686\|PILER-CR,CRISPRCasFinder,CRT	2238692-2238721	30	NZ_CP016290	Rhizobium leguminosarum strain Vaf10 plasmid unnamed3, complete sequence	472321-472350	7	0.767
CP029686_2	2.11\|2238890\|30\|CP029686\|CRISPRCasFinder,CRT	2238890-2238919	30	NZ_CP049251	Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed4, complete sequence	110306-110335	7	0.767
CP029686_2	2.13\|2239022\|30\|CP029686\|CRISPRCasFinder,CRT,PILER-CR	2239022-2239051	30	NZ_CP034227	Lactobacillus agilis strain La3 plasmid pLa3_2, complete sequence	3216-3245	8	0.733
CP029686_2	2.22\|2239616\|30\|CP029686\|CRISPRCasFinder,CRT	2239616-2239645	30	NZ_CP016024	Ralstonia insidiosa strain ATCC 49129 plasmid pRI-1, complete sequence	227967-227996	8	0.733
CP029686_2	2.4\|2238428\|30\|CP029686\|PILER-CR,CRISPRCasFinder,CRT	2238428-2238457	30	MN694055	Marine virus AFVG_250M1074, complete genome	14036-14065	9	0.7
CP029686_2	2.4\|2238428\|30\|CP029686\|PILER-CR,CRISPRCasFinder,CRT	2238428-2238457	30	MN693650	Marine virus AFVG_250M1058, complete genome	13744-13773	9	0.7
CP029686_2	2.8\|2238692\|30\|CP029686\|PILER-CR,CRISPRCasFinder,CRT	2238692-2238721	30	NC_021920	Corynebacterium maris DSM 45190 plasmid pCmaris1, complete sequence	44607-44636	9	0.7
CP029686_2	2.10\|2238824\|30\|CP029686\|PILER-CR,CRISPRCasFinder,CRT	2238824-2238853	30	KY653117	Staphylococcus phage IME1323_01, complete genome	20139-20168	9	0.7
CP029686_2	2.13\|2239022\|30\|CP029686\|CRISPRCasFinder,CRT,PILER-CR	2239022-2239051	30	MN693950	Marine virus AFVG_250M300, complete genome	1356-1385	10	0.667

1. spacer 2.2|2238296|30|CP029686|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022955 (Lactobacillus paracasei subsp. paracasei strain IBB3423 plasmid pLCAKO.1, complete sequence) position: , mismatch: 2, identity: 0.933

tgagcgtttttctttcctcaggtggttggc	CRISPR spacer
tgagcgtttttctttctttaggtggttggc	Protospacer
****************.*.***********

2. spacer 2.4|2238428|30|CP029686|PILER-CR,CRISPRCasFinder,CRT matches to MT773556 (Myoviridae sp. isolate BML_4 genomic sequence) position: , mismatch: 6, identity: 0.8

cttaagttttgtcatcagcactg--accagcc	CRISPR spacer
attaagttttgttatcagaactgatactag--	Protospacer
 ***********.***** ****  **.**

3. spacer 2.5|2238494|30|CP029686|PILER-CR,CRISPRCasFinder,CRT matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 6, identity: 0.8

cgagtcggcacggattcaacatgcggcaca	CRISPR spacer
caatccggcactggttcaacatgcggcacg	Protospacer
*.* .****** *.***************.

4. spacer 2.5|2238494|30|CP029686|PILER-CR,CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 7, identity: 0.767

cgagtcggcacggattcaacatgcggcaca	CRISPR spacer
ccacggggcgcggattcgacatgcggcacg	Protospacer
* *   ***.*******.***********.

5. spacer 2.5|2238494|30|CP029686|PILER-CR,CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 7, identity: 0.767

cgagtcggcacggattcaacatgcggcaca	CRISPR spacer
ccacggggcgcggattcgacatgcggcacg	Protospacer
* *   ***.*******.***********.

6. spacer 2.5|2238494|30|CP029686|PILER-CR,CRISPRCasFinder,CRT matches to MG757157 (Gordonia phage Flapper, complete genome) position: , mismatch: 7, identity: 0.767

cgagtcggcacggattcaacatgcggcaca	CRISPR spacer
catgtcggtacggattcaacgtgcgggtcg	Protospacer
*. *****.***********.*****  *.

7. spacer 2.6|2238560|30|CP029686|PILER-CR,CRISPRCasFinder,CRT matches to MN693516 (Marine virus AFVG_25M345, complete genome) position: , mismatch: 7, identity: 0.767

atacaaaaaaaatcatacagcctgcatcac-	CRISPR spacer
ttacaaaaaatatcttacagcctg-gttatg	Protospacer
 ********* *** ********* .*.*.

8. spacer 2.8|2238692|30|CP029686|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ctaaacgttcgcgaacctcattcaagctaa	CRISPR spacer
cttcgacttcgcgaacatcattcaggctaa	Protospacer
**  .  ********* *******.*****

9. spacer 2.8|2238692|30|CP029686|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016290 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

ctaaacgttcgcgaacctcattcaagctaa	CRISPR spacer
cttcgacttcgcgaacatcattcaggctaa	Protospacer
**  .  ********* *******.*****

10. spacer 2.11|2238890|30|CP029686|CRISPRCasFinder,CRT matches to NZ_CP049251 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.767

ccctttcgccgccatctttgatcgcccacg	CRISPR spacer
cattttcgccgccatcgttcatcgccatct	Protospacer
* .************* ** ******  *

11. spacer 2.13|2239022|30|CP029686|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034227 (Lactobacillus agilis strain La3 plasmid pLa3_2, complete sequence) position: , mismatch: 8, identity: 0.733

aagccgatgatataaagaaagacgcccctt	CRISPR spacer
tatgagcggatataaaaaaagacgccccta	Protospacer
 *   *  ********.************

12. spacer 2.22|2239616|30|CP029686|CRISPRCasFinder,CRT matches to NZ_CP016024 (Ralstonia insidiosa strain ATCC 49129 plasmid pRI-1, complete sequence) position: , mismatch: 8, identity: 0.733

gacgatctcgcacatgctcagtgatatgcg	CRISPR spacer
ccgtttttcgcacatgctcagtggtatggg	Protospacer
     *.****************.**** *

13. spacer 2.4|2238428|30|CP029686|PILER-CR,CRISPRCasFinder,CRT matches to MN694055 (Marine virus AFVG_250M1074, complete genome) position: , mismatch: 9, identity: 0.7

cttaagttttgtcatcagcactgaccagcc	CRISPR spacer
tggacgtttggtcatcagcactgaccgatg	Protospacer
.  * **** ****************...

14. spacer 2.4|2238428|30|CP029686|PILER-CR,CRISPRCasFinder,CRT matches to MN693650 (Marine virus AFVG_250M1058, complete genome) position: , mismatch: 9, identity: 0.7

cttaagttttgtcatcagcactgaccagcc	CRISPR spacer
tggacgtgttgtcatcagcactgaccgatg	Protospacer
.  * ** ******************...

15. spacer 2.8|2238692|30|CP029686|PILER-CR,CRISPRCasFinder,CRT matches to NC_021920 (Corynebacterium maris DSM 45190 plasmid pCmaris1, complete sequence) position: , mismatch: 9, identity: 0.7

ctaaacgttcgcgaacctcattcaagctaa	CRISPR spacer
agccgcgttcgcgaacctcactcgagcttc	Protospacer
    .***************.**.****

16. spacer 2.10|2238824|30|CP029686|PILER-CR,CRISPRCasFinder,CRT matches to KY653117 (Staphylococcus phage IME1323_01, complete genome) position: , mismatch: 9, identity: 0.7

gtgttagacttagatgtggatgttgccccg	CRISPR spacer
aatgtagacttagatgaggatgtagccaaa	Protospacer
.   ************ ****** ***  .

17. spacer 2.13|2239022|30|CP029686|CRISPRCasFinder,CRT,PILER-CR matches to MN693950 (Marine virus AFVG_250M300, complete genome) position: , mismatch: 10, identity: 0.667

aagccgatgatataaagaaagacgcccctt	CRISPR spacer
cagccgatgataaaaagaaagaaaaagaag	Protospacer
 *********** ********* .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

532206 : 541465

Streptococcus_phage(33.33%)

protease,integrase

attL 526287:526300|attR 548588:548601

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
526287:526300	attL	NA	NA	NA	NA
AWR90150.1\|532206_532704_+\|integrase	integrase	U5U4L5	Lactobacillus_phage	2.2e-59	87.9
AWR90151.1\|533108_533699_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.1e-52	52.3
AWR90152.1\|533815_534271_-	MarR family transcriptional regulator	NA	NA	NA	NA
AWR90153.1\|534656_535604_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	9.2e-54	40.7
AWR90154.1\|535608_536637_-	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	A1IMD5	Streptococcus_phage	2.3e-90	51.2
AWR90155.1\|536633_537521_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.1e-08	31.4
AWR90156.1\|537683_538223_-	hypothetical protein	NA	NA	NA	NA
AWR90157.1\|538573_541465_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	5.4e-307	56.1
548588:548601	attR	NA	NA	NA	NA

DBSCAN-SWA_2

937683 : 951092

Lactobacillus_phage(85.71%)

integrase

attL 947032:947046|attR 954971:954985

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR90520.1\|937683_938112_-	DUF1492 domain-containing protein	A0A0P0IJK8	Lactobacillus_phage	2.3e-73	96.5
AWR90521.1\|938722_938911_-	hypothetical protein	U5U4N2	Lactobacillus_phage	4.8e-15	74.5
AWR90522.1\|938914_939157_-	hypothetical protein	NA	NA	NA	NA
AWR90523.1\|939443_939821_-	hypothetical protein	NA	NA	NA	NA
AWR90524.1\|939866_940385_-	DNA polymerase III subunit epsilon	NA	NA	NA	NA
AWR90525.1\|940384_941209_-	DNA replication protein	A0A0P0I3L9	Lactobacillus_phage	3.0e-117	75.5
AWR90526.1\|941223_941973_-	DNA replication protein DnaD	A0A0N7IRA7	Lactobacillus_phage	4.0e-36	56.9
AWR90527.1\|941965_942280_-	hypothetical protein	NA	NA	NA	NA
AWR90528.1\|942356_942560_-	hypothetical protein	NA	NA	NA	NA
AWR90529.1\|942552_942645_-	hypothetical protein	A0A0P0IZE0	Lactobacillus_phage	1.6e-11	100.0
AWR90530.1\|942644_943001_-	DUF771 domain-containing protein	U5U4L9	Lactobacillus_phage	5.9e-62	96.6
AWR90531.1\|943066_943318_+	DUF1883 domain-containing protein	NA	NA	NA	NA
AWR90532.1\|943310_943466_-	hypothetical protein	NA	NA	NA	NA
AWR90533.1\|943512_944040_-	hypothetical protein	A0A2H4J505	uncultured_Caudovirales_phage	3.6e-15	41.7
AWR90534.1\|945133_945373_+	hypothetical protein	NA	NA	NA	NA
AWR90535.1\|945379_945613_-	hypothetical protein	NA	NA	NA	NA
AWR90536.1\|945613_945826_-	XRE family transcriptional regulator	A0A1B0YC38	Lactobacillus_phage	1.6e-30	95.7
AWR90537.1\|946083_946410_+	XRE family transcriptional regulator	A0A1B0Y3N1	Lactobacillus_phage	3.2e-54	97.2
AWR90538.1\|946406_946811_+	ImmA/IrrE family metallo-endopeptidase	A0A1B0Y2S4	Lactobacillus_phage	2.4e-72	94.0
AWR90539.1\|946883_947663_+	ion transporter	A0A1B0Y2S3	Lactobacillus_phage	3.2e-105	91.5
947032:947046	attL	NA	NA	NA	NA
AWR90540.1\|947796_948402_+	hypothetical protein	A0A097BY73	Enterococcus_phage	3.8e-13	56.1
AWR90541.1\|948504_948693_+	hypothetical protein	NA	NA	NA	NA
AWR90542.1\|948856_949138_+	hypothetical protein	A0A0P0HRW5	Lactobacillus_phage	2.1e-22	53.8
AWR90543.1\|949160_949496_+	hypothetical protein	NA	NA	NA	NA
AWR90544.1\|949550_949814_+	hypothetical protein	NA	NA	NA	NA
AWR90545.1\|949922_951092_+\|integrase	site-specific integrase	Q6J1W6	Lactobacillus_phage	1.7e-211	94.3
954971:954985	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1414862 : 1456072

Streptococcus_phage(33.33%)

bacteriocin,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR90941.1\|1414862_1416947_+\|bacteriocin	bacteriocin-associated protein	NA	NA	NA	NA
AWR90942.1\|1416939_1417596_+	ABC transporter	G9BWD6	Planktothrix_phage	5.8e-23	33.9
AWR90943.1\|1417754_1418633_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AWR90944.1\|1418729_1419389_-	transcriptional regulator flp	NA	NA	NA	NA
AWR90945.1\|1419437_1420022_-	DNA-binding protein	NA	NA	NA	NA
AWR90946.1\|1420169_1420397_-	copper chaperone	NA	NA	NA	NA
AWR90947.1\|1420416_1422273_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	9.8e-68	33.2
AWR90948.1\|1422309_1422495_+	hypothetical protein	NA	NA	NA	NA
AWR90949.1\|1422618_1422840_+	hypothetical protein	NA	NA	NA	NA
AWR90950.1\|1422905_1423559_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AWR90951.1\|1424179_1425433_+	CBS domain-containing protein	Q6GZ03	Mycoplasma_phage	1.5e-14	43.0
AWR90952.1\|1425435_1426065_+	ABC transporter permease	NA	NA	NA	NA
AWR90953.1\|1426076_1427006_+	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA
AWR90954.1\|1427005_1427668_+	ABC transporter permease	NA	NA	NA	NA
AWR90955.1\|1427881_1428142_+	hypothetical protein	NA	NA	NA	NA
AWR90956.1\|1428392_1428995_+	TetR family transcriptional regulator	NA	NA	NA	NA
AWR90957.1\|1428991_1432303_+	MMPL family transporter	NA	NA	NA	NA
AWR90958.1\|1432483_1432807_+	hypothetical protein	NA	NA	NA	NA
AWR90959.1\|1432984_1434358_+	MFS transporter	NA	NA	NA	NA
AWR90960.1\|1434772_1436293_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.1e-11	30.3
AWR92532.1\|1436586_1437261_+	transcriptional regulator	A0A1X9I6E0	Streptococcus_phage	1.8e-11	26.6
AWR90961.1\|1437449_1437770_-	hypothetical protein	NA	NA	NA	NA
AWR90962.1\|1438467_1439160_-	GntR family transcriptional regulator	NA	NA	NA	NA
AWR90963.1\|1439557_1440208_+	bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase	NA	NA	NA	NA
AWR92533.1\|1440553_1441429_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AWR90964.1\|1441431_1441536_-	hypothetical protein	NA	NA	NA	NA
AWR90965.1\|1441775_1441991_+	hypothetical protein	NA	NA	NA	NA
AWR90966.1\|1442343_1442634_+	hypothetical protein	NA	NA	NA	NA
AWR90967.1\|1442871_1443201_-	AzlD domain-containing protein	NA	NA	NA	NA
AWR90968.1\|1443187_1443898_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AWR90969.1\|1444231_1444570_-	hypothetical protein	NA	NA	NA	NA
AWR90970.1\|1444767_1445241_-	hypothetical protein	NA	NA	NA	NA
AWR90971.1\|1445598_1446210_+	hypothetical protein	NA	NA	NA	NA
AWR90972.1\|1446341_1446530_-	hypothetical protein	NA	NA	NA	NA
AWR90973.1\|1446698_1447010_+	Gar-IM	NA	NA	NA	NA
AWR90974.1\|1447059_1447695_-	hypothetical protein	NA	NA	NA	NA
AWR90975.1\|1447889_1449332_-	dipeptidase	NA	NA	NA	NA
AWR90976.1\|1449572_1449932_+	hypothetical protein	NA	NA	NA	NA
AWR90977.1\|1450007_1450352_+	hypothetical protein	NA	NA	NA	NA
AWR90978.1\|1450608_1451853_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	7.4e-11	23.0
AWR90979.1\|1452044_1453421_-	divalent metal cation transporter	NA	NA	NA	NA
AWR90980.1\|1453649_1454288_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AWR90981.1\|1454336_1455230_+	magnesium transporter CorA family protein	NA	NA	NA	NA
AWR90982.1\|1455394_1456072_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA

DBSCAN-SWA_4

1469917 : 1533792

Lactobacillus_phage(20.0%)

tRNA,protease,tail,terminase,portal,head,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR90996.1\|1469917_1470775_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AWR90997.1\|1471053_1471356_+	hypothetical protein	NA	NA	NA	NA
AWR90998.1\|1471568_1471964_+	hypothetical protein	NA	NA	NA	NA
AWR90999.1\|1472360_1472954_+	DUF1211 domain-containing protein	NA	NA	NA	NA
AWR92535.1\|1473026_1473221_-	hypothetical protein	NA	NA	NA	NA
AWR91000.1\|1473247_1474267_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AWR91001.1\|1474259_1475738_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
AWR91002.1\|1476179_1476416_-	30S ribosomal protein S18	NA	NA	NA	NA
AWR91003.1\|1476502_1477099_-	single-stranded DNA-binding protein	A0A2D1GPB7	Lactobacillus_phage	7.1e-52	58.1
AWR91004.1\|1477129_1477426_-	30S ribosomal protein S6	NA	NA	NA	NA
AWR91005.1\|1477553_1477985_-	single-stranded DNA-binding protein	A0A2I2MUI5	uncultured_Caudovirales_phage	1.3e-26	46.9
AWR91006.1\|1478167_1478872_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA
AWR91007.1\|1478976_1481598_-	DNA gyrase subunit A	A0A172JHV7	Bacillus_phage	2.9e-113	33.5
AWR91008.1\|1481659_1483621_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	4.3e-146	46.6
AWR91009.1\|1483873_1484989_-	DNA replication/repair protein RecF	NA	NA	NA	NA
AWR91010.1\|1484985_1485198_-	S4 domain-containing protein YaaA	NA	NA	NA	NA
AWR91011.1\|1485775_1486915_-	DNA polymerase III subunit beta	D0R7I4	Paenibacillus_phage	5.0e-14	33.1
AWR91012.1\|1487087_1488437_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA
AWR91013.1\|1489357_1489498_+	50S ribosomal protein L34	NA	NA	NA	NA
AWR91014.1\|1489631_1490183_+	ribonuclease P protein component	NA	NA	NA	NA
AWR91015.1\|1490327_1491164_+	membrane protein insertase YidC	NA	NA	NA	NA
AWR91016.1\|1491181_1491946_+	protein jag	NA	NA	NA	NA
AWR91017.1\|1492458_1493847_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
AWR91018.1\|1493888_1495790_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
AWR91019.1\|1496052_1496262_+	hypothetical protein	NA	NA	NA	NA
AWR91020.1\|1496423_1497188_+	threonine/serine exporter	NA	NA	NA	NA
AWR91021.1\|1497189_1497678_+	threonine/serine exporter	NA	NA	NA	NA
AWR91022.1\|1497694_1498873_+	amidohydrolase	NA	NA	NA	NA
AWR91023.1\|1499016_1500102_-	oxidoreductase	NA	NA	NA	NA
AWR92536.1\|1500831_1506786_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
AWR91024.1\|1506942_1508133_-	peptide ABC transporter permease	NA	NA	NA	NA
AWR91025.1\|1508119_1508809_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-37	39.3
AWR91026.1\|1508801_1509866_-	transporter	NA	NA	NA	NA
AWR91027.1\|1510436_1510613_-	hypothetical protein	NA	NA	NA	NA
AWR91028.1\|1510623_1510884_-	hypothetical protein	NA	NA	NA	NA
AWR91029.1\|1511226_1512012_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
AWR91030.1\|1512038_1512359_+	hypothetical protein	NA	NA	NA	NA
AWR92537.1\|1512302_1513013_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
AWR91031.1\|1513414_1515241_+	PTS mannitol transporter subunit IICBA	NA	NA	NA	NA
AWR91032.1\|1515277_1517335_+	HTH domain-containing protein	NA	NA	NA	NA
AWR91033.1\|1517306_1517783_+	PTS mannitol transporter subunit IIA	NA	NA	NA	NA
AWR91034.1\|1517786_1518941_+	mannitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA
AWR91035.1\|1519058_1520015_+	alpha/beta hydrolase	NA	NA	NA	NA
AWR91036.1\|1520111_1521041_-	alpha/beta hydrolase	NA	NA	NA	NA
AWR91037.1\|1521240_1522161_+	ribose-phosphate pyrophosphokinase	A0A1V0SHF7	Hokovirus	1.6e-42	32.9
AWR91038.1\|1522845_1523214_+	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
AWR91039.1\|1523325_1523574_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
AWR91040.1\|1523589_1523730_+	hypothetical protein	NA	NA	NA	NA
AWR91041.1\|1523836_1524037_+	hypothetical protein	NA	NA	NA	NA
AWR91042.1\|1524605_1524947_-\|head,tail	head-tail adaptor protein	I7AUE6	Enterococcus_phage	5.5e-09	39.7
AWR91043.1\|1524930_1525221_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
AWR91044.1\|1525282_1526824_-\|capsid	phage major capsid protein	B8R651	Lactobacillus_phage	2.1e-39	25.5
AWR91045.1\|1526810_1527995_-\|portal	phage portal protein	A0A2H4J5A4	uncultured_Caudovirales_phage	1.5e-61	35.0
AWR91046.1\|1527999_1528179_-	hypothetical protein	NA	NA	NA	NA
AWR91047.1\|1528144_1529848_-\|terminase	terminase	E9LUI0	Lactobacillus_phage	2.5e-118	39.9
AWR91048.1\|1529844_1530315_-\|terminase	phage terminase small subunit P27 family	M1PKP2	Streptococcus_phage	1.9e-07	29.3
AWR91049.1\|1530439_1530865_-	endonuclease	D2JLE2	Staphylococcus_phage	3.0e-12	38.8
AWR91050.1\|1531380_1532976_-	DNA primase	A0A0M4RE09	Enterococcus_phage	2.6e-40	31.3
AWR91051.1\|1532979_1533792_-	DNA replication protein	Q854C1	Mycobacterium_phage	6.7e-13	32.5

DBSCAN-SWA_5

1983534 : 2056935

Staphylococcus_phage(18.18%)

bacteriocin,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR91478.1\|1983534_1984779_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	2.0e-11	22.4
AWR91479.1\|1984858_1985062_-	hypothetical protein	NA	NA	NA	NA
AWR91480.1\|1985374_1986325_+	peptide ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.3e-12	25.4
AWR91481.1\|1986321_1987092_+	antibiotic ABC transporter permease	NA	NA	NA	NA
AWR91482.1\|1987095_1987875_+	ABC transporter permease	NA	NA	NA	NA
AWR91483.1\|1988169_1988985_+	ABC transporter permease	NA	NA	NA	NA
AWR91484.1\|1988981_1989683_+	sulfonate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.6e-32	39.8
AWR91485.1\|1989679_1990912_+	acyltransferase	NA	NA	NA	NA
AWR91486.1\|1990868_1992401_+	acyl-CoA synthetase	A0A1V0SBX8	Catovirus	7.5e-13	25.6
AWR91487.1\|1992390_1993365_+	aliphatic sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA
AWR91488.1\|1993444_1993666_+	hypothetical protein	NA	NA	NA	NA
AWR91489.1\|1993744_1994548_-	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
AWR91490.1\|1994544_1995327_-	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
AWR91491.1\|1995326_1996100_-	phosphonates import ATP-binding protein PhnC	G9BWD6	Planktothrix_phage	1.6e-24	38.3
AWR91492.1\|1997487_1999743_-	proton-efflux P-type ATPase	A0A1J0FA34	Only_Syngen_Nebraska_virus	1.5e-38	23.1
AWR91493.1\|2001087_2001384_+\|transposase	transposase	NA	NA	NA	NA
AWR91494.1\|2001380_2002244_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	1.2e-23	30.1
AWR91495.1\|2002671_2002959_+	hypothetical protein	NA	NA	NA	NA
AWR91496.1\|2003549_2003960_+	CrcB family protein	NA	NA	NA	NA
AWR91497.1\|2003953_2004310_+	CrcB family protein	NA	NA	NA	NA
AWR91498.1\|2004692_2004857_-	hypothetical protein	NA	NA	NA	NA
AWR92555.1\|2005463_2005772_+\|transposase	transposase	NA	NA	NA	NA
AWR91499.1\|2006054_2007242_+	hypothetical protein	NA	NA	NA	NA
AWR91500.1\|2007416_2009795_+	cell surface protein	NA	NA	NA	NA
AWR91501.1\|2009975_2010137_+	hypothetical protein	NA	NA	NA	NA
AWR91502.1\|2010399_2010549_-	hypothetical protein	NA	NA	NA	NA
AWR91503.1\|2010790_2011693_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AWR91504.1\|2011691_2011850_+	hypothetical protein	NA	NA	NA	NA
AWR91505.1\|2011843_2013679_-	hypothetical protein	NA	NA	NA	NA
AWR91506.1\|2013941_2014466_+	hypothetical protein	NA	NA	NA	NA
AWR91507.1\|2014622_2015255_+	NUDIX domain-containing protein	NA	NA	NA	NA
AWR91508.1\|2015372_2016014_-	NAD-dependent dehydratase	NA	NA	NA	NA
AWR91509.1\|2016253_2017171_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AWR91510.1\|2017371_2017491_+	hypothetical protein	NA	NA	NA	NA
AWR91511.1\|2017579_2017849_+	30S ribosomal protein S14	NA	NA	NA	NA
AWR91512.1\|2018049_2019516_+	aldehyde dehydrogenase	NA	NA	NA	NA
AWR91513.1\|2019791_2020535_+	metal ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-12	25.9
AWR91514.1\|2020531_2021428_+	metal ABC transporter permease	NA	NA	NA	NA
AWR91515.1\|2021424_2022366_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AWR91516.1\|2022486_2022819_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AWR91517.1\|2022839_2023478_-	cation transporter	NA	NA	NA	NA
AWR91518.1\|2023606_2023798_-	hypothetical protein	NA	NA	NA	NA
AWR91519.1\|2023862_2024042_-	hypothetical protein	NA	NA	NA	NA
AWR91520.1\|2024043_2025573_+	copper oxidase	NA	NA	NA	NA
AWR91521.1\|2025612_2026986_+	MFS transporter	NA	NA	NA	NA
AWR91522.1\|2027139_2027505_-	hypothetical protein	NA	NA	NA	NA
AWR91523.1\|2027804_2030522_-	cation-transporting ATPase	M1HJQ2	Paramecium_bursaria_Chlorella_virus	4.1e-62	28.7
AWR91524.1\|2030909_2032517_+	divalent metal cation transporter	NA	NA	NA	NA
AWR91525.1\|2032500_2032644_+	hypothetical protein	NA	NA	NA	NA
AWR91526.1\|2032808_2033567_+	hypothetical protein	NA	NA	NA	NA
AWR91527.1\|2033699_2035076_+	class II fumarate hydratase	NA	NA	NA	NA
AWR91528.1\|2035337_2036501_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA
AWR91529.1\|2036526_2037261_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AWR91530.1\|2037465_2038419_+	aldo/keto reductase	A0A1V0SDE7	Indivirus	6.3e-10	24.6
AWR91531.1\|2038690_2038924_+\|bacteriocin	class IIb bacteriocin	NA	NA	NA	NA
AWR91532.1\|2038920_2039136_+\|bacteriocin	class IIb bacteriocin	NA	NA	NA	NA
AWR91533.1\|2039271_2039580_+	hypothetical protein	NA	NA	NA	NA
AWR91534.1\|2039569_2039758_-	hypothetical protein	NA	NA	NA	NA
AWR91535.1\|2039850_2040447_+	sugar O-acetyltransferase	NA	NA	NA	NA
AWR91536.1\|2040565_2040901_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
AWR91537.1\|2041213_2041405_+	hypothetical protein	NA	NA	NA	NA
AWR91538.1\|2041656_2041989_+	hypothetical protein	NA	NA	NA	NA
AWR91539.1\|2042500_2043358_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AWR91540.1\|2043468_2043738_+	hypothetical protein	NA	NA	NA	NA
AWR91541.1\|2043956_2044127_+	hypothetical protein	NA	NA	NA	NA
AWR91542.1\|2044158_2044383_-	hypothetical protein	NA	NA	NA	NA
AWR91543.1\|2044704_2044893_+\|bacteriocin	ComC/BlpC family peptide pheromone/bacteriocin	NA	NA	NA	NA
AWR91544.1\|2044918_2045101_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
AWR91545.1\|2045360_2045600_-	hypothetical protein	NA	NA	NA	NA
AWR91546.1\|2046146_2046344_+	hypothetical protein	NA	NA	NA	NA
AWR91547.1\|2046705_2047512_-	DNA-binding response regulator	NA	NA	NA	NA
AWR91548.1\|2047516_2048815_-	GHKL domain-containing protein	NA	NA	NA	NA
AWR91549.1\|2049004_2049142_+\|bacteriocin	bacteriocin prepeptide or inducing factor for bacteriocin synthesis	NA	NA	NA	NA
AWR91550.1\|2049607_2051800_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	8.1e-37	26.7
AWR91551.1\|2051810_2053190_+\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
AWR91552.1\|2053363_2053714_+	hypothetical protein	NA	NA	NA	NA
AWR92556.1\|2053804_2054098_+	hypothetical protein	NA	NA	NA	NA
AWR91553.1\|2054403_2055759_+	threonine/serine exporter family protein	NA	NA	NA	NA
AWR91554.1\|2055860_2056157_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
AWR91555.1\|2056348_2056633_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
AWR91556.1\|2056656_2056935_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA

DBSCAN-SWA_6

2479307 : 2540968

Lactobacillus_phage(73.08%)

holin,tail,transposase,terminase,portal,integrase,head,capsid

attL 2467267:2467326|attR 2533492:2534953

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2467267:2467326	attL	NA	NA	NA	NA
AWR91920.1\|2479307_2479769_-\|tail	phage tail protein	NA	NA	NA	NA
AWR91921.1\|2479826_2480732_-	prolyl aminopeptidase	NA	NA	NA	NA
AWR91922.1\|2480787_2482617_-	potassium transporter	NA	NA	NA	NA
AWR91923.1\|2482688_2482883_+	Tat pathway signal protein	NA	NA	NA	NA
AWR91924.1\|2483906_2486198_+	ATP-dependent DNA helicase	NA	NA	NA	NA
AWR91925.1\|2486202_2486679_+	acyl-CoA thioesterase	NA	NA	NA	NA
AWR91926.1\|2487010_2488420_+	dipeptidase	NA	NA	NA	NA
AWR91927.1\|2488483_2488774_-	hypothetical protein	NA	NA	NA	NA
AWR91928.1\|2488820_2489183_-	hypothetical protein	NA	NA	NA	NA
AWR91929.1\|2489338_2490265_+	type I pantothenate kinase	A0A1B1ISL9	uncultured_Mediterranean_phage	4.1e-30	32.9
AWR91930.1\|2490437_2491991_+	GMP synthase (glutamine-hydrolyzing)	A0A1V0SH76	Hokovirus	1.8e-14	28.4
AWR91931.1\|2492155_2493319_-\|integrase	integrase	A0A1X9I5C3	Streptococcus_phage	5.6e-45	31.5
AWR91932.1\|2493696_2494959_-	hypothetical protein	A0A141E0C6	Streptococcus_phage	3.5e-16	24.6
AWR91933.1\|2495020_2495224_-	hypothetical protein	A0A0P0IQK8	Lactobacillus_phage	3.5e-27	85.1
AWR91934.1\|2495248_2495674_-	pyridoxamine 5'-phosphate oxidase family protein	A0A0P0I7K6	Lactobacillus_phage	6.6e-60	84.4
AWR91935.1\|2495736_2496270_-	BioY family transporter	NA	NA	NA	NA
AWR91936.1\|2496421_2497123_-	phage immunity protein	A9D9J1	Lactobacillus_prophage	3.3e-24	38.7
AWR91937.1\|2497215_2497566_-	hypothetical protein	A0A1B0Y4P2	Lactobacillus_phage	5.8e-54	94.0
AWR91938.1\|2497650_2498334_-	hypothetical protein	NA	NA	NA	NA
AWR91939.1\|2498390_2498813_-	ImmA/IrrE family metallo-endopeptidase	A0A0P0IJN5	Lactobacillus_phage	1.3e-71	91.3
AWR91940.1\|2498802_2499141_-	XRE family transcriptional regulator	A0A0P0IZG9	Lactobacillus_phage	1.3e-55	98.2
AWR91941.1\|2499274_2499517_+	XRE family transcriptional regulator	A0A0P0HRP5	Lactobacillus_phage	2.3e-33	93.8
AWR91942.1\|2499513_2499672_+	hypothetical protein	NA	NA	NA	NA
AWR91943.1\|2499729_2500236_+	hypothetical protein	NA	NA	NA	NA
AWR91944.1\|2500241_2500451_+	hypothetical protein	NA	NA	NA	NA
AWR91945.1\|2500463_2500595_+	hypothetical protein	A0A0P0IQL2	Lactobacillus_phage	4.8e-14	93.0
AWR92573.1\|2500694_2501102_+	hypothetical protein	A0A0P0IXE5	Lactobacillus_phage	5.5e-72	95.6
AWR91946.1\|2501114_2501774_+	ERF superfamily protein	A0A0S2MYH3	Enterococcus_phage	4.6e-12	33.7
AWR91947.1\|2501770_2502202_+	single-stranded DNA-binding protein	A0A2D1GPB7	Lactobacillus_phage	6.9e-49	66.2
AWR91948.1\|2503307_2503532_-	hypothetical protein	NA	NA	NA	NA
AWR91949.1\|2503647_2503863_+	XRE family transcriptional regulator	A0A0P0IJY1	Lactobacillus_phage	1.3e-32	100.0
AWR91950.1\|2503859_2504309_+	hypothetical protein	B4XYT0	Lactobacillus_phage	2.8e-69	93.9
AWR91951.1\|2504311_2504695_+	hypothetical protein	A0A0P0IJU5	Lactobacillus_phage	2.1e-65	95.3
AWR91952.1\|2504706_2505417_+	methylase	A8YQM7	Lactobacillus_phage	6.3e-124	96.5
AWR91953.1\|2505403_2506327_+\|integrase	site-specific integrase	A8ATM2	Listeria_phage	2.4e-67	42.4
AWR91954.1\|2506337_2506910_+	hypothetical protein	NA	NA	NA	NA
AWR92574.1\|2506939_2507050_+	acetyltransferase	A0A2D1GP93	Lactobacillus_phage	2.4e-11	91.7
AWR91955.1\|2507046_2507550_+	hypothetical protein	Q8LTB6	Lactobacillus_phage	4.9e-54	68.0
AWR91956.1\|2507539_2507752_+	hypothetical protein	NA	NA	NA	NA
AWR91957.1\|2507744_2508017_+	hypothetical protein	A0A2D1GPA3	Lactobacillus_phage	4.4e-33	77.8
AWR91958.1\|2508019_2508220_+	hypothetical protein	NA	NA	NA	NA
AWR91959.1\|2508212_2508419_+	hypothetical protein	B4XYT6	Lactobacillus_phage	1.5e-33	98.5
AWR91960.1\|2508415_2508814_+	hypothetical protein	C1KFT5	Lactobacillus_virus	2.1e-20	44.9
AWR91961.1\|2508810_2509227_+	hypothetical protein	C1KFT7	Lactobacillus_virus	4.5e-37	56.5
AWR91962.1\|2509219_2509507_+	hypothetical protein	Q8LTA8	Lactobacillus_phage	3.7e-51	95.8
AWR92575.1\|2509503_2509575_+	hypothetical protein	NA	NA	NA	NA
AWR91963.1\|2509576_2509849_+	hypothetical protein	NA	NA	NA	NA
AWR92576.1\|2510166_2510622_+	hypothetical protein	NA	NA	NA	NA
AWR91964.1\|2511265_2511916_+	hypothetical protein	NA	NA	NA	NA
AWR91965.1\|2512023_2513172_+	hypothetical protein	A0A0P0I3G0	Lactobacillus_phage	9.6e-215	95.5
AWR91966.1\|2513318_2513969_+\|terminase	terminase	A0A1S5SAA7	Streptococcus_phage	4.5e-44	48.9
AWR91967.1\|2513946_2515302_+\|terminase	PBSX family phage terminase large subunit	A4L7R3	Lactococcus_phage	1.4e-148	58.6
AWR91968.1\|2515306_2516734_+\|portal	phage portal protein	A0A0P0IQQ3	Lactobacillus_phage	4.7e-251	92.4
AWR91969.1\|2516699_2517692_+\|head	phage head morphogenesis protein	A0A0P0ID43	Lactobacillus_phage	3.3e-171	91.2
AWR91970.1\|2517816_2518455_+	DUF4355 domain-containing protein	A0A0P0ID10	Lactobacillus_phage	4.7e-86	96.2
AWR91971.1\|2518467_2518782_+	hypothetical protein	A0A0P0IJQ8	Lactobacillus_phage	4.7e-47	93.3
AWR91972.1\|2518795_2519815_+\|capsid	minor capsid protein E	A0A0P0IZJ7	Lactobacillus_phage	1.2e-189	99.1
AWR91973.1\|2520042_2520417_+	hypothetical protein	A0A0P0IZF6	Lactobacillus_phage	1.4e-58	91.9
AWR91974.1\|2520421_2520724_+	hypothetical protein	A0A0P0HRN0	Lactobacillus_phage	2.0e-47	89.0
AWR91975.1\|2520720_2521086_+\|tail	phage tail protein	A0A0P0IUZ3	Lactobacillus_phage	1.2e-57	96.7
AWR91976.1\|2521086_2521491_+	DUF3168 domain-containing protein	A0A0P0I3C8	Lactobacillus_phage	7.8e-71	99.3
AWR91977.1\|2521502_2522102_+\|tail	phage tail protein	A0A0P0ID88	Lactobacillus_phage	3.4e-102	93.9
AWR91978.1\|2522188_2522524_+	hypothetical protein	A0A0P0IJV9	Lactobacillus_phage	1.6e-53	99.1
AWR91979.1\|2522622_2522976_+	hypothetical protein	A0A0P0ID51	Lactobacillus_phage	9.0e-55	94.0
AWR91980.1\|2522968_2526298_+\|tail	phage tail tape measure protein	A0A0P0IQK3	Lactobacillus_phage	3.6e-238	75.5
AWR91981.1\|2526298_2528365_+\|tail	phage tail protein	Q3L0S3	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	1.7e-209	58.2
AWR91982.1\|2528365_2530801_+\|tail	phage tail protein	Q6J1X1	Lactobacillus_phage	0.0e+00	73.2
AWR91983.1\|2530802_2531087_+	hypothetical protein	Q3L0S1	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	1.1e-21	53.2
AWR91984.1\|2531083_2531215_+	XkdX family protein	A0A0P0HRS7	Lactobacillus_phage	8.5e-19	97.7
AWR91985.1\|2531245_2531644_+	hypothetical protein	U5U712	Lactobacillus_phage	4.4e-66	99.2
AWR91986.1\|2531612_2531819_+	hypothetical protein	A8YQK5	Lactobacillus_phage	3.2e-12	92.3
AWR91987.1\|2531815_2532262_+\|holin	phage holin	A8YQK6	Lactobacillus_phage	1.7e-66	95.9
AWR91988.1\|2532272_2533448_+	endolysin	A0A0P0HRN9	Lactobacillus_phage	6.4e-89	50.5
AWR91989.1\|2533630_2534875_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	2.0e-11	22.4
AWR91990.1\|2535079_2535574_-	hypothetical protein	NA	NA	NA	NA
2533492:2534953	attR	NA	NA	NA	NA
AWR91991.1\|2535570_2536680_-	DNA-binding protein	NA	NA	NA	NA
AWR91992.1\|2536853_2537225_-	acetyl-CoA carboxyl transferase	NA	NA	NA	NA
AWR91993.1\|2537952_2539368_+	hypothetical protein	NA	NA	NA	NA
AWR91994.1\|2539805_2540030_-\|transposase	transposase	NA	NA	NA	NA
AWR91995.1\|2540491_2540968_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_7

2846715 : 2936116

102

Lactobacillus_phage(71.43%)

holin,tRNA,protease,tail,terminase,portal,integrase,head,capsid

attL 2855662:2855681|attR 2896314:2896333

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR92282.1\|2846715_2847483_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AWR92283.1\|2847619_2847967_+	50S ribosomal protein L19	NA	NA	NA	NA
AWR92284.1\|2848193_2848370_+	hypothetical protein	NA	NA	NA	NA
AWR92285.1\|2848402_2848648_+	DUF896 family protein	NA	NA	NA	NA
AWR92286.1\|2848708_2848930_+	YneF family protein	NA	NA	NA	NA
AWR92287.1\|2849071_2850829_+	multidrug ABC transporter permease/ATP-binding protein	W8CYL7	Bacillus_phage	3.0e-50	27.5
AWR92288.1\|2850818_2852612_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	6.4e-40	25.4
AWR92289.1\|2852709_2853501_-	DUF1003 domain-containing protein	NA	NA	NA	NA
AWR92290.1\|2853531_2854926_-	amino acid permease	NA	NA	NA	NA
AWR92291.1\|2854982_2855633_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
2855662:2855681	attL	NA	NA	NA	NA
AWR92292.1\|2855804_2857025_-\|integrase	site-specific integrase	B4XYR4	Lactobacillus_phage	1.8e-102	48.5
AWR92293.1\|2857083_2857347_-	hypothetical protein	B4XYT0	Lactobacillus_phage	3.2e-09	40.2
AWR92294.1\|2857462_2858188_-	hypothetical protein	U5U717	Lactobacillus_phage	1.0e-20	30.5
AWR92295.1\|2858202_2858424_+	hypothetical protein	U5U783	Lactobacillus_phage	4.8e-22	70.4
AWR92296.1\|2858683_2859361_-	transcriptional regulator	O64371	Lactobacillus_phage	4.8e-81	92.0
AWR92297.1\|2859425_2859848_-	hypothetical protein	A0A1B0Y2S4	Lactobacillus_phage	8.3e-23	39.6
AWR92298.1\|2859840_2860182_-	XRE family transcriptional regulator	A0A1B0Y3N1	Lactobacillus_phage	5.5e-17	43.1
AWR92299.1\|2860440_2860686_+	hypothetical protein	A0A0P0ID24	Lactobacillus_phage	1.2e-37	95.1
AWR92300.1\|2860686_2861427_+	hypothetical protein	A0A1B0YEA7	Lactobacillus_phage	5.7e-43	51.7
AWR92301.1\|2861427_2861643_+	hypothetical protein	A0A182BQC3	Lactococcus_phage	1.4e-13	52.1
AWR92302.1\|2861605_2862100_-	hypothetical protein	NA	NA	NA	NA
AWR92303.1\|2862164_2862521_+	DUF771 domain-containing protein	U5U4L9	Lactobacillus_phage	2.0e-62	98.3
AWR92304.1\|2862520_2862613_+	hypothetical protein	A0A0P0IZE0	Lactobacillus_phage	1.6e-11	100.0
AWR92305.1\|2862605_2862827_+	hypothetical protein	NA	NA	NA	NA
AWR92306.1\|2862893_2863208_+	hypothetical protein	NA	NA	NA	NA
AWR92307.1\|2863200_2863950_+	DNA replication protein DnaD	A0A0N7IRA7	Lactobacillus_phage	2.3e-36	57.7
AWR92308.1\|2863964_2864789_+	DNA replication protein	A0A0P0I3L9	Lactobacillus_phage	3.0e-117	75.5
AWR92309.1\|2864788_2865307_+	DNA polymerase III subunit epsilon	NA	NA	NA	NA
AWR92310.1\|2865353_2865776_+	replication terminator protein	NA	NA	NA	NA
AWR92311.1\|2865777_2866515_+	hypothetical protein	A0A097BY87	Enterococcus_phage	7.7e-48	43.0
AWR92312.1\|2866526_2866814_+	hypothetical protein	Q8LTA8	Lactobacillus_phage	1.6e-49	94.7
AWR92592.1\|2866810_2866882_+	hypothetical protein	NA	NA	NA	NA
AWR92313.1\|2866883_2867216_+	hypothetical protein	NA	NA	NA	NA
AWR92593.1\|2867692_2868148_+	hypothetical protein	NA	NA	NA	NA
AWR92314.1\|2868134_2868332_-	hypothetical protein	NA	NA	NA	NA
AWR92315.1\|2868948_2869728_+	hypothetical protein	Q8LTA5	Lactobacillus_phage	5.0e-13	80.4
AWR92316.1\|2869826_2870033_+	hypothetical protein	NA	NA	NA	NA
AWR92317.1\|2870022_2870970_-	hypothetical protein	NA	NA	NA	NA
AWR92318.1\|2871679_2872897_+	hypothetical protein	A8YQN3	Lactobacillus_phage	2.1e-236	97.3
AWR92319.1\|2872883_2873213_+	ribonucleoside-diphosphate reductase	A0A0N7IRA2	Lactobacillus_phage	8.7e-52	92.4
AWR92594.1\|2873476_2873800_+	hypothetical protein	U5U409	Lactobacillus_phage	5.0e-36	87.2
AWR92320.1\|2873971_2874766_+	HNH endonuclease	U5U440	Lactobacillus_phage	1.2e-147	97.7
AWR92321.1\|2874966_2875422_+\|terminase	terminase	U5U3Z1	Lactobacillus_phage	1.0e-79	98.7
AWR92322.1\|2875443_2877156_+	amino acid transporter	Q8LTC3	Lactobacillus_phage	0.0e+00	98.9
AWR92323.1\|2877167_2877362_+	hypothetical protein	U5U6Z9	Lactobacillus_phage	7.2e-22	79.7
AWR92324.1\|2877367_2878621_+\|portal	phage portal protein	Q8LTC2	Lactobacillus_phage	4.8e-236	98.8
AWR92325.1\|2878574_2879204_+\|head,protease	HK97 family phage prohead protease	U5U3W0	Lactobacillus_phage	3.0e-117	99.0
AWR92326.1\|2879245_2880448_+\|capsid	phage major capsid protein	B4XYP6	Lactobacillus_phage	2.8e-209	96.0
AWR92327.1\|2880465_2880705_+	hypothetical protein	A0A2D1GPN4	Lactobacillus_phage	1.6e-31	96.2
AWR92328.1\|2880715_2881075_+	DNA-packaging protein	U5U4K5	Lactobacillus_phage	1.4e-58	95.8
AWR92329.1\|2881064_2881394_+\|head,tail	head-tail adaptor protein	A0A2D1GPN9	Lactobacillus_phage	8.9e-57	98.2
AWR92330.1\|2881393_2881780_+	hypothetical protein	U5U769	Lactobacillus_phage	6.1e-65	95.3
AWR92331.1\|2881779_2882166_+\|tail	phage tail protein	U5U3W4	Lactobacillus_phage	6.3e-70	97.7
AWR92332.1\|2882199_2882808_+\|tail	phage tail protein	A0A2D1GPC8	Lactobacillus_phage	2.1e-107	96.0
AWR92333.1\|2882834_2883050_+	DNA-binding protein	A0A2D1GPF6	Lactobacillus_phage	3.7e-19	91.5
AWR92334.1\|2883120_2883534_+	hypothetical protein	U5U4K9	Lactobacillus_phage	2.4e-51	99.3
AWR92335.1\|2883656_2888519_+\|tail	phage tail tape measure protein	A0A2D1GPD5	Lactobacillus_phage	0.0e+00	94.3
AWR92336.1\|2888519_2890514_+\|tail	phage tail protein	Q3L0S3	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	6.1e-217	59.8
AWR92337.1\|2890514_2892950_+\|tail	phage tail protein	Q6J1X1	Lactobacillus_phage	0.0e+00	72.3
AWR92338.1\|2892951_2893242_+	hypothetical protein	Q3L0S1	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	1.5e-23	55.2
AWR92339.1\|2893234_2893366_+	XkdX family protein	A0A0P0HRS7	Lactobacillus_phage	5.5e-18	95.3
AWR92340.1\|2893396_2893783_+	hypothetical protein	U5U712	Lactobacillus_phage	2.1e-65	98.4
AWR92341.1\|2893763_2893973_+	hypothetical protein	A0A2D1GPJ3	Lactobacillus_phage	1.5e-12	100.0
AWR92342.1\|2893965_2894412_+\|holin	phage holin	A8YQK6	Lactobacillus_phage	1.9e-65	97.3
AWR92343.1\|2894422_2895721_+	1,4-beta-N-acetylmuramidase	B4XYQ9	Lactobacillus_phage	2.8e-218	89.8
AWR92344.1\|2896069_2896276_+	hypothetical protein	NA	NA	NA	NA
AWR92595.1\|2896366_2897101_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
2896314:2896333	attR	NA	NA	NA	NA
AWR92345.1\|2897090_2897360_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
AWR92346.1\|2897755_2898544_+	30S ribosomal protein S2	NA	NA	NA	NA
AWR92347.1\|2898628_2899510_+	elongation factor Ts	NA	NA	NA	NA
AWR92348.1\|2899745_2900465_+	UMP kinase	NA	NA	NA	NA
AWR92349.1\|2900464_2901022_+	ribosome-recycling factor	NA	NA	NA	NA
AWR92350.1\|2901551_2902304_+	isoprenyl transferase	R9W0U9	Flavobacterium_phage	2.1e-21	41.2
AWR92351.1\|2902339_2903128_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
AWR92352.1\|2903144_2904386_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
AWR92353.1\|2904410_2906138_+\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	1.8e-07	29.9
AWR92354.1\|2906204_2910539_+	PolC-type DNA polymerase III	A0A0A7RWA3	Clostridium_phage	1.5e-18	36.0
AWR92355.1\|2910793_2911273_+	ribosome maturation factor	NA	NA	NA	NA
AWR92356.1\|2911289_2912543_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA
AWR92357.1\|2912554_2912848_+	YlxR family protein	NA	NA	NA	NA
AWR92358.1\|2912844_2913150_+	YlxQ-related RNA-binding protein	NA	NA	NA	NA
AWR92359.1\|2913170_2916002_+	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	5.8e-19	40.0
AWR92360.1\|2916062_2916416_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
AWR92361.1\|2916722_2917514_+	DUF475 domain-containing protein	S5MAL1	Bacillus_phage	1.8e-34	44.7
AWR92362.1\|2917525_2918431_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
AWR92363.1\|2918437_2919385_+	riboflavin biosynthesis protein RibF	NA	NA	NA	NA
AWR92364.1\|2919386_2920532_+	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA
AWR92365.1\|2920694_2921741_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA
AWR92366.1\|2921917_2922508_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
AWR92367.1\|2922537_2924412_+	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	2.6e-140	51.0
AWR92368.1\|2924423_2924510_+	hypothetical protein	NA	NA	NA	NA
AWR92369.1\|2924524_2925688_+	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	1.4e-24	27.2
AWR92596.1\|2925705_2925819_-	hypothetical protein	NA	NA	NA	NA
AWR92370.1\|2927790_2928699_+	XRE family transcriptional regulator	NA	NA	NA	NA
AWR92371.1\|2928855_2930694_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	2.0e-20	25.9
AWR92372.1\|2930785_2931019_-	hypothetical protein	NA	NA	NA	NA
AWR92373.1\|2931024_2931501_-	ASCH domain-containing protein	NA	NA	NA	NA
AWR92374.1\|2931824_2932196_-	hypothetical protein	NA	NA	NA	NA
AWR92375.1\|2932470_2934765_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	5.1e-74	31.6
AWR92376.1\|2934761_2935289_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	6.5e-25	41.4
AWR92377.1\|2935338_2935551_-	alpha-galactosidase	NA	NA	NA	NA
AWR92378.1\|2935612_2936116_+\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA

DBSCAN-SWA_8

2948712 : 3001332

Lactobacillus_rhamnosus_Lc-Nu-like_prophage(39.29%)

holin,tRNA,tail,transposase,terminase,portal,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWR92395.1\|2948712_2949159_+\|tRNA	D-aminoacyl-tRNA deacylase	NA	NA	NA	NA
AWR92396.1\|2949158_2949785_+	HAD family hydrolase	NA	NA	NA	NA
AWR92397.1\|2949857_2951180_-	N-acetylmuramoyl-L-alanine amidase	A0A0N6W8I1	Bacillus_phage	8.4e-13	32.2
AWR92398.1\|2951318_2951759_-	hypothetical protein	NA	NA	NA	NA
AWR92399.1\|2952004_2952880_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.0e-22	32.5
AWR92400.1\|2952876_2954382_+	ABC transporter permease	NA	NA	NA	NA
AWR92401.1\|2954510_2954837_-	inorganic pyrophosphatase	NA	NA	NA	NA
AWR92402.1\|2955108_2955312_-	hypothetical protein	NA	NA	NA	NA
AWR92403.1\|2955357_2956641_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
AWR92404.1\|2956642_2958448_+\|tRNA	aspartate--tRNA ligase	A0A2K9KZX5	Tupanvirus	8.0e-06	34.4
AWR92405.1\|2958535_2958988_+	peptide-methionine (R)-S-oxide reductase	NA	NA	NA	NA
AWR92406.1\|2959079_2960000_+	YitT family protein	NA	NA	NA	NA
AWR92407.1\|2960135_2961023_+	deoxyribonuclease IV	A0A2H4UU70	Bodo_saltans_virus	2.1e-23	28.5
AWR92408.1\|2961019_2961850_-	pyruvate, phosphate dikinase regulatory protein	NA	NA	NA	NA
AWR92409.1\|2962153_2962330_+	30S ribosomal protein S21	NA	NA	NA	NA
AWR92410.1\|2962349_2962793_+	GatB/YqeY domain-containing protein	NA	NA	NA	NA
AWR92411.1\|2963241_2964228_+	PhoH family protein	H6X2N1	Pseudomonas_phage	1.9e-49	46.5
AWR92412.1\|2964231_2964690_+	endoribonuclease YbeY	NA	NA	NA	NA
AWR92413.1\|2964673_2965072_+	diacylglycerol kinase	NA	NA	NA	NA
AWR92414.1\|2965073_2965463_+	cytidine deaminase	NA	NA	NA	NA
AWR92415.1\|2965459_2966362_+	GTPase Era	NA	NA	NA	NA
AWR92416.1\|2966361_2967141_+	DNA repair protein RecO	NA	NA	NA	NA
AWR92417.1\|2967391_2967703_+	hypothetical protein	NA	NA	NA	NA
AWR92418.1\|2967847_2968156_+	hypothetical protein	NA	NA	NA	NA
AWR92419.1\|2968185_2968410_-	hypothetical protein	NA	NA	NA	NA
AWR92420.1\|2968990_2969857_+	hypothetical protein	NA	NA	NA	NA
AWR92598.1\|2970088_2970856_+	hypothetical protein	NA	NA	NA	NA
AWR92421.1\|2972248_2973484_+	hypothetical protein	NA	NA	NA	NA
AWR92422.1\|2973487_2974096_+	hypothetical protein	A0A0A7DMX6	Lactobacillus_phage	8.3e-16	32.2
AWR92423.1\|2974149_2974377_+	hypothetical protein	NA	NA	NA	NA
AWR92424.1\|2974369_2975227_+	hypothetical protein	NA	NA	NA	NA
AWR92425.1\|2975183_2975597_+	single-stranded DNA-binding protein	M4W9P8	Bacillus_phage	6.3e-07	33.6
AWR92426.1\|2975695_2976133_+	DNA primase	B8R694	Lactobacillus_phage	2.0e-24	54.9
AWR92427.1\|2976125_2976404_+	hypothetical protein	NA	NA	NA	NA
AWR92428.1\|2976413_2976929_+	hypothetical protein	NA	NA	NA	NA
AWR92429.1\|2977209_2977506_+\|transposase	transposase	NA	NA	NA	NA
AWR92430.1\|2977502_2978366_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	3.1e-24	30.5
AWR92431.1\|2979776_2980244_+\|terminase	phage terminase small subunit P27 family	B8R648	Lactobacillus_phage	1.0e-21	38.5
AWR92432.1\|2980237_2982130_+\|terminase	terminase large subunit	A0A0M7RDK9	Lactobacillus_phage	9.8e-156	44.7
AWR92433.1\|2982290_2982587_+\|transposase	transposase	NA	NA	NA	NA
AWR92434.1\|2982583_2983447_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	3.1e-24	30.5
AWR92599.1\|2983603_2984608_+\|portal	phage portal protein	Q9AZM4	Lactococcus_phage	1.7e-69	42.1
AWR92435.1\|2986208_2986505_+\|transposase	transposase	NA	NA	NA	NA
AWR92436.1\|2986501_2987365_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	3.1e-24	30.5
AWR92437.1\|2988001_2988289_+	hypothetical protein	NA	NA	NA	NA
AWR92438.1\|2988278_2988623_+\|tail	phage tail protein	Q6J1Y0	Lactobacillus_phage	2.8e-45	79.8
AWR92439.1\|2988625_2989045_+\|head,tail	head-tail connector protein	Q3L0S9	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	1.9e-67	92.8
AWR92440.1\|2989041_2989422_+\|tail	phage tail protein	Q3L0S8	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	9.7e-63	94.4
AWR92441.1\|2989422_2990034_+\|tail	phage tail protein	Q3L0S7	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	6.7e-98	90.1
AWR92442.1\|2990196_2990547_+\|tail	phage tail protein	Q3L0S6	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	7.8e-43	79.3
AWR92443.1\|2990509_2990755_+	hypothetical protein	Q3L0S5	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	5.0e-36	94.7
AWR92600.1\|2990784_2994678_+\|tail	phage tail protein	Q6J1X5	Lactobacillus_phage	2.5e-254	69.4
AWR92444.1\|2994678_2996691_+\|tail	phage tail protein	Q3L0S3	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	1.6e-297	76.5
AWR92445.1\|2996691_2999145_+\|tail	phage tail protein	Q3L0S2	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	0.0e+00	68.6
AWR92446.1\|2999154_2999445_+	hypothetical protein	Q3L0S1	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	7.4e-39	82.3
AWR92447.1\|2999437_2999569_+	XkdX family protein	Q3L0S0	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	1.4e-16	86.0
AWR92448.1\|2999593_2999827_+	DNA primase	Q3L0R9	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	5.8e-34	96.1
AWR92449.1\|2999839_3000172_+\|holin	phage holin	Q3L0R7	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	2.2e-31	97.6
AWR92450.1\|3000174_3001332_+	endolysin	Q6J1W8	Lactobacillus_phage	1.2e-143	64.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP029686

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection