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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025501 Clostridium perfringens strain EHE-NE18 chromosome, complete genome 0 crisprs cas3,csx1,c2c9_V-U4,DEDDh,cas14j,cas2,csa3,DinG 0 0 7 0
CP025502 Clostridium perfringens strain EHE-NE18 plasmid pJIR3535, complete sequence 0 crisprs RT 0 0 7 0
CP025504 Clostridium perfringens strain EHE-NE18 plasmid pJIR3537, complete sequence 0 crisprs RT 0 0 0 0
CP025503 Clostridium perfringens strain EHE-NE18 plasmid pJIR3844, complete sequence 0 crisprs RT 0 0 0 0

Results visualization

1. CP025501
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 234466 : 341721 100 Clostridium_phage(59.09%) head,holin,capsid,portal,terminase,tRNA,protease,tail,integrase attL 255117:255135|attR 341457:341475
DBSCAN-SWA_2 982312 : 1033707 49 Clostridium_phage(57.69%) holin,capsid,portal,terminase,integrase attL 997189:997206|attR 1040679:1040696
DBSCAN-SWA_3 1040472 : 1052273 10 Clostridium_phage(85.71%) tail NA
DBSCAN-SWA_4 1412422 : 1425012 9 Synechococcus_phage(25.0%) NA NA
DBSCAN-SWA_5 2141469 : 2179890 43 Clostridium_phage(47.37%) head,capsid,portal,terminase,tRNA,protease,tail,integrase,bacteriocin attL 2141483:2141498|attR 2171565:2171580
DBSCAN-SWA_6 2404310 : 2518002 111 Clostridium_phage(54.29%) head,capsid,portal,terminase,tRNA,protease,tail,integrase attL 2454618:2454635|attR 2492057:2492074
DBSCAN-SWA_7 2620306 : 2633560 12 Clostridium_phage(22.22%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP025502
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 7877 8 Bacillus_phage(50.0%) integrase NA
DBSCAN-SWA_2 13304 : 19497 7 Clostridium_phage(66.67%) NA NA
DBSCAN-SWA_3 29731 : 39297 6 Staphylococcus_phage(16.67%) NA NA
DBSCAN-SWA_4 54976 : 56329 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_5 64027 : 66344 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_6 71648 : 72668 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_7 78083 : 81789 3 Pseudomonas_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage