CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP022520	Pantoea vagans strain FBS135 plasmid pPant4, complete sequence	0 crisprs	NA	0
CP022517	Pantoea vagans strain FBS135 plasmid pPant1, complete sequence	0 crisprs	csa3	0
CP020820	Pantoea vagans strain FBS135 chromosome, complete genome	0 crisprs	DEDDh,cas3,DinG	6
CP022519	Pantoea vagans strain FBS135 plasmid pPant3, complete sequence	0 crisprs	NA	0
CP022518	Pantoea vagans strain FBS135 plasmid pPant2, complete sequence	0 crisprs	cas3,WYL,csa3	2

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1089341 : 1135490

Escherichia_phage(36.59%)

integrase,tail,holin,terminase

attL 1085231:1085246|attR 1118863:1118878

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1085231:1085246	attL	NA	NA	NA	NA
AWP31999.1\|1089341_1090808_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	4.4e-87	37.9
AWP32000.1\|1090876_1092457_+	GMP synthase (glutamine-hydrolyzing)	NA	NA	NA	NA
AWP32001.1\|1092673_1093933_+\|integrase	integrase	T1S9J3	Salmonella_phage	1.2e-170	72.6
AWP32002.1\|1093917_1094091_-	MFS transporter permease	NA	NA	NA	NA
AWP32003.1\|1094087_1094318_-	hypothetical protein	A0A2H4J1E7	uncultured_Caudovirales_phage	7.7e-23	86.2
AWP32004.1\|1094314_1095016_-	DNA methyltransferase	A0A248SKY3	Klebsiella_phage	7.4e-93	73.6
AWP32005.1\|1095012_1095372_-	hypothetical protein	NA	NA	NA	NA
AWP32006.1\|1095374_1095650_-	AlpA family transcriptional regulator	A0A193GYW1	Enterobacter_phage	3.3e-12	59.0
AWP32007.1\|1095710_1096718_-	single-stranded DNA-binding protein	G9L6A2	Escherichia_phage	5.3e-84	62.3
AWP32008.1\|1096714_1097569_-	exodeoxyribonuclease VIII	E5AGE0	Erwinia_phage	1.2e-116	70.6
AWP32009.1\|1097565_1097853_-	hypothetical protein	NA	NA	NA	NA
AWP32010.1\|1097860_1098937_-	hypothetical protein	M9P0E1	Enterobacteria_phage	8.0e-38	72.3
AWP32011.1\|1098942_1099128_-	hypothetical protein	NA	NA	NA	NA
AWP32012.1\|1099100_1099292_-	hypothetical protein	NA	NA	NA	NA
AWP32013.1\|1099636_1100212_-	transcriptional regulator	G9L6A6	Escherichia_phage	7.3e-38	47.7
AWP32014.1\|1100370_1100598_+	hypothetical protein	NA	NA	NA	NA
AWP32015.1\|1100770_1100980_+	hypothetical protein	A0A193GYW4	Enterobacter_phage	8.5e-21	77.0
AWP32016.1\|1100979_1101987_+	hypothetical protein	G9L6A8	Escherichia_phage	6.3e-77	60.9
AWP32017.1\|1101874_1102444_+	replication protein	A0A0U2JGJ0	Escherichia_phage	6.2e-21	37.7
AWP32018.1\|1102633_1102981_+	DUF1064 domain-containing protein	T1SA23	Salmonella_phage	3.9e-34	64.1
AWP32019.1\|1103062_1103671_+	hypothetical protein	NA	NA	NA	NA
AWP32020.1\|1103670_1103949_+	hypothetical protein	NA	NA	NA	NA
AWP32021.1\|1103941_1104661_+	hypothetical protein	O03965	Myxococcus_phage	4.4e-40	42.9
AWP32022.1\|1104660_1105179_+	hypothetical protein	V5URG6	Shigella_phage	1.5e-66	72.7
AWP32023.1\|1105171_1105510_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	2.2e-34	62.2
AWP32024.1\|1105514_1105793_+	hypothetical protein	NA	NA	NA	NA
AWP32025.1\|1105834_1106038_+	hypothetical protein	NA	NA	NA	NA
AWP32026.1\|1106132_1106372_+	hypothetical protein	NA	NA	NA	NA
AWP32027.1\|1106441_1107014_+\|terminase	terminase small subunit	G9L6B7	Escherichia_phage	2.6e-51	56.1
AWP32028.1\|1107006_1108479_+\|terminase	terminase	A0A193GYS2	Enterobacter_phage	7.7e-233	77.7
AWP32029.1\|1108475_1108688_-	hypothetical protein	NA	NA	NA	NA
AWP32030.1\|1108776_1109133_-	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	8.0e-35	64.2
AWP32031.1\|1109661_1109868_+	hypothetical protein	G9L6C1	Escherichia_phage	2.8e-08	89.7
AWP32032.1\|1109885_1111547_+\|tail	phage tail protein	T1S9Z7	Salmonella_phage	1.6e-218	69.4
AWP32033.1\|1111543_1111846_+	hypothetical protein	Q2A090	Sodalis_phage	2.0e-18	59.5
AWP32034.1\|1111842_1112556_+	peptidase	G9L6C4	Escherichia_phage	8.7e-49	62.4
AWP32035.1\|1112567_1113554_+	hypothetical protein	G9L6C5	Escherichia_phage	5.2e-169	87.2
AWP32036.1\|1113607_1114045_+	hypothetical protein	A0A193GYT9	Enterobacter_phage	4.1e-49	71.7
AWP32037.1\|1114056_1114464_+	hypothetical protein	G9L6C7	Escherichia_phage	2.2e-20	43.9
AWP32038.1\|1114513_1114840_+	hypothetical protein	G9L6C8	Escherichia_phage	2.8e-18	50.0
AWP32039.1\|1114839_1115445_+	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	3.2e-68	61.7
AWP32040.1\|1115444_1117919_+	hypothetical protein	G9L6D0	Escherichia_phage	0.0e+00	72.2
AWP32041.1\|1117918_1118398_+	hypothetical protein	G9L6D1	Escherichia_phage	5.1e-45	53.9
AWP32042.1\|1118382_1118961_+	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	3.2e-25	49.0
1118863:1118878	attR	NA	NA	NA	NA
AWP32043.1\|1118973_1121484_+	hypothetical protein	Q858G0	Salmonella_phage	1.1e-250	54.0
AWP32044.1\|1121483_1123352_+	hypothetical protein	Q858F9	Salmonella_phage	4.0e-162	51.2
AWP32045.1\|1123351_1126117_+	hypothetical protein	Q858F8	Salmonella_phage	0.0e+00	75.4
AWP32046.1\|1126373_1126634_-	hypothetical protein	T1SA06	Salmonella_phage	1.9e-09	37.5
AWP32047.1\|1126759_1129408_+	hypothetical protein	G9L6E4	Escherichia_phage	6.8e-62	50.2
AWP32048.1\|1130696_1131149_-	hypothetical protein	NA	NA	NA	NA
AWP32049.1\|1131375_1131789_+	hypothetical protein	G9L6E6	Escherichia_phage	5.6e-16	41.5
AWP32050.1\|1131772_1132081_+\|holin	holin	A0A248XD85	Klebsiella_phage	2.4e-11	42.2
AWP32051.1\|1132022_1132580_+	hypothetical protein	A0A088FRS5	Escherichia_phage	5.6e-43	54.4
AWP32052.1\|1132576_1133134_+	hypothetical protein	A0A193GYI0	Enterobacter_phage	1.6e-29	50.6
AWP32053.1\|1133548_1134322_+	hypothetical protein	NA	NA	NA	NA
AWP32054.1\|1134352_1134532_-	DUF2158 domain-containing protein	NA	NA	NA	NA
AWP32055.1\|1134726_1134972_+	hypothetical protein	NA	NA	NA	NA
AWP32056.1\|1134992_1135490_+	DNA-binding protein	J9Q7G7	Salmonella_phage	3.3e-10	30.6

DBSCAN-SWA_2

1210538 : 1315996

117

Enterobacteria_phage(22.73%)

tRNA,head,capsid,lysis,portal,terminase,protease,integrase,tail

attL 1241172:1241196|attR 1278594:1278618

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWP32124.1\|1210538_1211954_+\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
AWP32125.1\|1211989_1212343_-	hypothetical protein	NA	NA	NA	NA
AWP32126.1\|1212454_1213243_-	formate/nitrite transporter	NA	NA	NA	NA
AWP32127.1\|1214111_1215302_-	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA
AWP32128.1\|1215671_1216913_+	divalent metal cation transporter	NA	NA	NA	NA
AWP32129.1\|1216959_1217379_-	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
AWP32130.1\|1217550_1218540_-	L-glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA
AWP32131.1\|1218759_1220412_+	indolepyruvate decarboxylase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	4.0e-12	22.0
AWP32132.1\|1220572_1221538_+	glucokinase	NA	NA	NA	NA
AWP32133.1\|1221704_1222433_-	DNA-binding response regulator	NA	NA	NA	NA
AWP32134.1\|1222429_1224100_-	sensor histidine kinase	NA	NA	NA	NA
AWP32135.1\|1224369_1224894_+	N-acetyltransferase	NA	NA	NA	NA
AWP32136.1\|1225011_1226244_+	alanine transaminase	NA	NA	NA	NA
AWP32137.1\|1226573_1227602_-	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AWP32138.1\|1227604_1229203_-	EmrB/QacA family drug resistance transporter	NA	NA	NA	NA
AWP32139.1\|1229352_1230132_+	IclR family transcriptional regulator	NA	NA	NA	NA
AWP32140.1\|1230145_1230598_+	universal stress protein	NA	NA	NA	NA
AWP32141.1\|1230607_1231414_+	hypothetical protein	NA	NA	NA	NA
AWP32142.1\|1231688_1231970_+	hypothetical protein	NA	NA	NA	NA
AWP32143.1\|1232482_1233358_+	gluconolactonase	NA	NA	NA	NA
AWP32144.1\|1233406_1234633_-	MFS transporter	NA	NA	NA	NA
AWP32145.1\|1234924_1235158_+	hypothetical protein	NA	NA	NA	NA
AWP32146.1\|1235194_1236094_-	EamA family transporter	NA	NA	NA	NA
AWP32147.1\|1236271_1237150_+	AraC family transcriptional regulator	NA	NA	NA	NA
AWP32148.1\|1237445_1237928_-	Hcp1 family type VI secretion system effector	NA	NA	NA	NA
AWP32149.1\|1238010_1238799_+	DUF4225 domain-containing protein	NA	NA	NA	NA
AWP32150.1\|1238800_1239148_-	hypothetical protein	NA	NA	NA	NA
AWP32151.1\|1239445_1240024_+	hypothetical protein	NA	NA	NA	NA
AWP32152.1\|1240257_1240476_-	hypothetical protein	NA	NA	NA	NA
1241172:1241196	attL	NA	NA	NA	NA
AWP32153.1\|1241388_1242567_+\|integrase	integrase	A0A2R2Z2Y0	Escherichia_phage	1.3e-193	82.7
AWP32154.1\|1242621_1243641_+	hypothetical protein	NA	NA	NA	NA
AWP32155.1\|1243757_1243952_-	hypothetical protein	A0A2R2Z2X2	Escherichia_phage	6.5e-15	61.4
AWP32156.1\|1244236_1244401_-	DUF1317 domain-containing protein	NA	NA	NA	NA
AWP32157.1\|1245078_1245723_-	DNA-binding protein	A0A1I9KG86	Aeromonas_phage	2.5e-39	40.7
AWP32158.1\|1245822_1246032_+	cell division protein	NA	NA	NA	NA
AWP32159.1\|1246060_1246609_+	DNA-binding protein	A0A1C9II13	Salmonella_phage	8.2e-55	61.5
AWP32160.1\|1246795_1246990_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	2.4e-09	62.3
AWP32161.1\|1246967_1247861_+	transcriptional regulator	H2DE83	Erwinia_phage	3.9e-38	63.9
AWP32162.1\|1247874_1248309_+	hypothetical protein	NA	NA	NA	NA
AWP32163.1\|1248424_1249765_+	chromosome partitioning protein ParB	A0A2H4J902	uncultured_Caudovirales_phage	7.3e-81	70.0
AWP32164.1\|1250344_1251028_+	hypothetical protein	NA	NA	NA	NA
AWP32165.1\|1251024_1251792_+	hypothetical protein	A0A1X9I669	Streptococcus_phage	4.1e-36	35.0
AWP32166.1\|1251825_1252182_+	hypothetical protein	NA	NA	NA	NA
AWP32167.1\|1252178_1253201_+	hypothetical protein	A0A1C9IHZ5	Salmonella_phage	3.3e-97	52.4
AWP32168.1\|1253222_1253651_+	antitermination protein Q	U5P0A5	Shigella_phage	3.9e-44	69.2
AWP32169.1\|1253998_1254241_+\|lysis	lysis protein	A0A2H4JCI1	uncultured_Caudovirales_phage	9.9e-37	97.5
AWP32170.1\|1254244_1254754_+	lysozyme	A0A2H4JCH1	uncultured_Caudovirales_phage	2.0e-87	90.5
AWP32171.1\|1254737_1255208_+\|lysis	lysis protein	A0A2H4JHL8	uncultured_Caudovirales_phage	1.6e-62	81.4
AWP32172.1\|1255210_1255456_+	hypothetical protein	NA	NA	NA	NA
AWP32173.1\|1255575_1255851_+	hypothetical protein	G8C7W3	Escherichia_phage	2.4e-15	56.4
AWP32174.1\|1256013_1256697_+	hypothetical protein	Q7Y4L7	Streptococcus_phage	1.4e-35	53.6
AWP32175.1\|1256727_1257018_+	HNH endonuclease	A0A286N2R3	Klebsiella_phage	3.5e-49	89.6
AWP32176.1\|1257030_1257240_+	serine acetyltransferase	A0A220NRN5	Escherichia_phage	1.4e-07	57.8
AWP32177.1\|1257420_1257855_+	hypothetical protein	A0A286S1P9	Klebsiella_phage	1.9e-67	90.3
AWP32178.1\|1257867_1259400_+\|terminase	terminase	A0A286S1M9	Klebsiella_phage	4.6e-273	92.2
AWP32179.1\|1259401_1260679_+\|portal	phage portal protein	A0A286S1N5	Klebsiella_phage	1.5e-229	92.9
AWP32180.1\|1260696_1261365_+\|head,protease	prohead protease	A0A286S1N1	Klebsiella_phage	3.1e-96	80.5
AWP32181.1\|1261376_1262543_+\|capsid	phage major capsid protein	A0A286S1R4	Klebsiella_phage	2.0e-199	92.5
AWP32182.1\|1262562_1262796_+	hypothetical protein	NA	NA	NA	NA
AWP32183.1\|1262761_1263088_+	hypothetical protein	A0A286S294	Klebsiella_phage	4.6e-37	67.6
AWP32184.1\|1263148_1263367_+	hypothetical protein	NA	NA	NA	NA
AWP32185.1\|1263369_1263702_+\|head,tail	head-tail adaptor protein	A0A286S2A2	Klebsiella_phage	8.2e-42	73.6
AWP34582.1\|1263694_1264180_+	hypothetical protein	A0A0U3TGT7	Pseudomonas_phage	4.5e-49	60.0
AWP32186.1\|1264176_1264542_+	hypothetical protein	K7PHI9	Enterobacteria_phage	4.2e-47	73.6
AWP32187.1\|1264596_1265100_+\|tail	phage tail protein	Q9MCU9	Escherichia_phage	9.7e-79	90.7
AWP32188.1\|1265143_1265629_+\|tail	phage tail protein	K7PJU9	Enterobacteria_phage	2.5e-55	87.0
AWP32189.1\|1265826_1268301_+\|tail	phage tail tape measure protein	K7PM62	Enterobacteria_phage	9.3e-223	55.5
AWP32190.1\|1268316_1268658_+\|tail	phage tail protein	E4WL34	Enterobacteria_phage	3.9e-31	55.5
AWP32191.1\|1268710_1269448_+\|tail	phage minor tail protein L	M9NYX1	Enterobacteria_phage	6.8e-121	80.4
AWP32192.1\|1269450_1270170_+	peptidase P60	M9NZD8	Enterobacteria_phage	2.2e-100	68.8
AWP32193.1\|1270162_1270786_+\|tail	tail assembly protein	K7PH59	Enterobacterial_phage	6.0e-62	59.4
AWP32194.1\|1270842_1274052_+	host specificity protein	E4WL39	Enterobacteria_phage	0.0e+00	65.0
AWP32195.1\|1274051_1274354_+	hypothetical protein	NA	NA	NA	NA
AWP32196.1\|1274415_1275036_+	hypothetical protein	K7PGX6	Enterobacteria_phage	1.6e-14	37.4
AWP32197.1\|1275124_1275349_+	cor protein	E4WL42	Enterobacteria_phage	1.4e-13	48.7
AWP32198.1\|1276214_1276646_+\|tail	phage tail protein	A0A2P1JUG3	Erwinia_phage	2.1e-13	39.5
AWP32199.1\|1276875_1277115_+	DNA polymerase V	A0A2H4J1N5	uncultured_Caudovirales_phage	8.5e-25	68.4
AWP32200.1\|1277116_1277443_+	phage repressor protein	A0A2H4J4R6	uncultured_Caudovirales_phage	1.5e-35	64.2
AWP32201.1\|1277544_1278051_-	hypothetical protein	NA	NA	NA	NA
AWP32202.1\|1278053_1278359_-	hypothetical protein	NA	NA	NA	NA
AWP32203.1\|1278856_1279792_-	hypothetical protein	E7DYY8	Enterobacteria_phage	2.6e-117	77.2
1278594:1278618	attR	NA	NA	NA	NA
AWP32204.1\|1280034_1280652_+	heme ABC exporter ATP-binding protein CcmA	W5SAS9	Pithovirus	5.3e-10	28.6
AWP32205.1\|1280651_1281311_+	heme exporter protein CcmB	NA	NA	NA	NA
AWP32206.1\|1281378_1282119_+	heme ABC transporter permease	NA	NA	NA	NA
AWP32207.1\|1282115_1282349_+	heme exporter protein CcmD	NA	NA	NA	NA
AWP32208.1\|1282345_1282831_+	cytochrome c biogenesis protein CcmE	NA	NA	NA	NA
AWP32209.1\|1282827_1284786_+	c-type cytochrome biogenesis protein CcmF	NA	NA	NA	NA
AWP32210.1\|1284782_1285340_+	DsbE family thiol:disulfide interchange protein	NA	NA	NA	NA
AWP34583.1\|1285333_1285789_+	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA
AWP32211.1\|1285788_1287000_+	c-type cytochrome biogenesis protein CcmI	NA	NA	NA	NA
AWP32212.1\|1287150_1287915_+	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
AWP32213.1\|1288232_1289516_-	long-chain fatty acid transporter	NA	NA	NA	NA
AWP32214.1\|1289874_1290171_+	hypothetical protein	NA	NA	NA	NA
AWP32215.1\|1290329_1291640_+	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
AWP32216.1\|1291639_1293736_+	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
AWP32217.1\|1293960_1294443_+	phosphohistidine phosphatase SixA	NA	NA	NA	NA
AWP32218.1\|1294472_1295021_-	endonuclease SmrB	NA	NA	NA	NA
AWP32219.1\|1295180_1296113_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
AWP32220.1\|1296158_1297244_+	chorismate synthase	A0A291AU41	Pandoravirus	5.3e-90	48.2
AWP32221.1\|1297248_1298073_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
AWP32222.1\|1298081_1298885_+	hypothetical protein	NA	NA	NA	NA
AWP32223.1\|1298904_1299450_+	elongation factor P hydroxylase	NA	NA	NA	NA
AWP32224.1\|1299482_1299767_+	hypothetical protein	NA	NA	NA	NA
AWP32225.1\|1299803_1301810_-\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
AWP32226.1\|1301964_1303185_+	beta-ketoacyl-[acyl-carrier-protein] synthase I	NA	NA	NA	NA
AWP32227.1\|1303263_1304688_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AWP32228.1\|1304775_1305219_+	rhodanese	NA	NA	NA	NA
AWP32229.1\|1305220_1306267_-	flagella biosynthesis regulator	NA	NA	NA	NA
AWP32230.1\|1306380_1307886_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA
AWP32231.1\|1307896_1308328_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
AWP34584.1\|1308340_1309321_-	tricarboxylic transporter	NA	NA	NA	NA
AWP32232.1\|1309441_1310113_+	DNA-binding response regulator	NA	NA	NA	NA
AWP32233.1\|1310103_1311492_+	histidine kinase	NA	NA	NA	NA
AWP32234.1\|1311472_1312372_-	EamA family transporter	NA	NA	NA	NA
AWP32235.1\|1312744_1313878_+	erythronate-4-phosphate dehydrogenase	A0A285PXZ1	Cedratvirus	2.2e-17	27.3
AWP32236.1\|1314182_1315190_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
AWP32237.1\|1315192_1315996_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA

DBSCAN-SWA_3

1794570 : 1849499

uncultured_Caudovirales_phage(21.05%)

tRNA,lysis,terminase,tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWP34597.1\|1794570_1796301_-\|tRNA	arginine--tRNA ligase	A0A2K9L2F0	Tupanvirus	4.1e-92	34.7
AWP32623.1\|1796919_1797510_+	VOC family protein	NA	NA	NA	NA
AWP32624.1\|1797506_1798652_-	aspartate aminotransferase	NA	NA	NA	NA
AWP32625.1\|1798737_1799490_+	copper homeostasis protein CutC	NA	NA	NA	NA
AWP32626.1\|1799780_1800626_+	hypothetical protein	NA	NA	NA	NA
AWP32627.1\|1800656_1801754_-	glycerol dehydrogenase	NA	NA	NA	NA
AWP34598.1\|1801891_1802515_+	LysE family translocator	NA	NA	NA	NA
AWP32628.1\|1802518_1803487_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
AWP32629.1\|1803483_1804212_-	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	NA	NA	NA
AWP32630.1\|1804293_1804689_-	hypothetical protein	NA	NA	NA	NA
AWP32631.1\|1804758_1805580_-	hypothetical protein	Q859D1	Escherichia_coli_phage	2.7e-49	70.9
AWP32632.1\|1805791_1807570_+\|tRNA	aspartate--tRNA ligase	A0A2K9L3L6	Tupanvirus	2.8e-11	26.4
AWP32633.1\|1807569_1808001_+	NUDIX pyrophosphatase	NA	NA	NA	NA
AWP32634.1\|1808286_1809030_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AWP32635.1\|1809064_1809592_+	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	3.8e-09	32.4
AWP32636.1\|1809688_1810303_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
AWP32637.1\|1810311_1811316_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	1.8e-07	25.9
AWP32638.1\|1811316_1812102_-	zinc ABC transporter permease	NA	NA	NA	NA
AWP32639.1\|1812098_1812854_-	zinc ABC transporter ATP-binding protein ZnuC	W6JKT0	Anomala_cuprea_entomopoxvirus	5.7e-14	29.5
AWP32640.1\|1812931_1813879_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
AWP32641.1\|1813892_1815224_+	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	4.8e-16	40.9
AWP32642.1\|1815349_1816324_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
AWP32643.1\|1816449_1817682_-	multidrug transporter MdfA	NA	NA	NA	NA
AWP32644.1\|1817766_1819209_-	pyruvate kinase	NA	NA	NA	NA
AWP34599.1\|1819316_1820189_-	transcriptional regulator HexR	NA	NA	NA	NA
AWP32645.1\|1820558_1822034_+	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	9.2e-77	36.1
AWP32646.1\|1822248_1822887_+	keto-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
AWP32647.1\|1822921_1824100_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
AWP32648.1\|1824265_1824922_+	DUF533 domain-containing protein	NA	NA	NA	NA
AWP32649.1\|1825047_1827111_+	oligopeptidase B	NA	NA	NA	NA
AWP34600.1\|1827104_1827773_-	exodeoxyribonuclease X	NA	NA	NA	NA
AWP32650.1\|1827772_1828006_-	DNA polymerase III subunit theta	A0A077SLL5	Escherichia_phage	9.2e-16	65.2
AWP32651.1\|1828156_1828534_+	hypothetical protein	NA	NA	NA	NA
AWP32652.1\|1828538_1829414_+	copper resistance protein CopD	NA	NA	NA	NA
AWP32653.1\|1829442_1829790_+	DUF2511 domain-containing protein	NA	NA	NA	NA
AWP32654.1\|1830098_1830398_-	hypothetical protein	A0A2H4IYC8	uncultured_Caudovirales_phage	2.6e-47	95.9
AWP32655.1\|1831041_1831284_+\|lysis	lysis protein	A0A2H4JCI1	uncultured_Caudovirales_phage	4.0e-38	100.0
AWP32656.1\|1831781_1832252_+\|lysis	lysis protein	A0A2H4JHL8	uncultured_Caudovirales_phage	2.9e-61	82.1
AWP32657.1\|1832288_1833194_-	hypothetical protein	NA	NA	NA	NA
AWP32658.1\|1833190_1833442_-	hypothetical protein	NA	NA	NA	NA
AWP32659.1\|1833456_1833903_+\|terminase	terminase small subunit	A0A1W6JNT5	Morganella_phage	6.9e-68	84.5
AWP32660.1\|1833994_1835212_+\|terminase	terminase	A0A2H4J196	uncultured_Caudovirales_phage	4.1e-240	98.8
AWP32661.1\|1836630_1836930_-	DUF1493 domain-containing protein	NA	NA	NA	NA
AWP32662.1\|1836923_1837382_-	hypothetical protein	A0A218M4J4	Erwinia_phage	1.5e-17	37.1
AWP34601.1\|1840299_1840473_-	hypothetical protein	NA	NA	NA	NA
AWP32663.1\|1840809_1841250_+	hypothetical protein	NA	NA	NA	NA
AWP32664.1\|1841303_1841630_-\|tail	phage tail protein	Q9MCR5	Enterobacteria_phage	1.9e-14	40.2
AWP32665.1\|1842291_1842468_+	hypothetical protein	NA	NA	NA	NA
AWP32666.1\|1842894_1843134_-	hypothetical protein	NA	NA	NA	NA
AWP32667.1\|1843507_1844530_+	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	2.8e-24	25.3
AWP32668.1\|1844956_1845142_-	hypothetical protein	NA	NA	NA	NA
AWP32669.1\|1845372_1846515_-	acyltransferase	Q6QI96	Burkholderia_phage	8.0e-36	31.6
AWP32670.1\|1846714_1847044_-	multidrug transporter subunit MdtI	NA	NA	NA	NA
AWP32671.1\|1847030_1847381_-	multidrug transporter subunit MdtJ	NA	NA	NA	NA
AWP32672.1\|1847816_1849499_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	7.1e-57	31.1

DBSCAN-SWA_4

2326939 : 2340788

Pandoravirus(11.11%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWP33102.1\|2326939_2327986_+	3-deoxy-7-phosphoheptulonate synthase	S4W5F1	Pandoravirus	3.8e-85	50.3
AWP33103.1\|2327993_2329445_-	SELO family protein	NA	NA	NA	NA
AWP33104.1\|2329524_2330271_-	EAL domain-containing protein	NA	NA	NA	NA
AWP33105.1\|2330565_2331024_-	endopeptidase	A0A217EQL1	Bacillus_phage	5.5e-12	38.4
AWP33106.1\|2331092_2331842_-	vitamin B12 ABC transporter ATP-binding protein BtuD	W5SAS9	Pithovirus	1.8e-07	26.1
AWP33107.1\|2331842_2332388_-	glutathione peroxidase	A0A1S7DM81	Molluscum_contagiosum_virus	5.9e-13	35.8
AWP33108.1\|2332437_2333421_-	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
AWP33109.1\|2333599_2333902_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.3e-13	40.0
AWP33110.1\|2333906_2336294_-\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	4.1e-10	32.0
AWP33111.1\|2336308_2337292_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	2.9e-34	37.6
AWP33112.1\|2337606_2337963_-	50S ribosomal protein L20	NA	NA	NA	NA
AWP33113.1\|2338007_2338205_-	50S ribosomal protein L35	NA	NA	NA	NA
AWP33114.1\|2338304_2338856_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	1.7e-15	32.9
AWP33115.1\|2338859_2340788_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	6.3e-126	36.8

DBSCAN-SWA_5

3110361 : 3118087

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWP33796.1\|3110361_3110832_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	5.4e-31	49.3
AWP33797.1\|3110922_3112023_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase	A0A1V0SE20	Indivirus	7.4e-47	33.7
AWP33798.1\|3112026_3112476_-	transcriptional regulator NrdR	NA	NA	NA	NA
AWP33799.1\|3112662_3113100_+	peptidoglycan-binding protein LysM	G3MBQ1	Bacillus_virus	7.3e-06	50.0
AWP33800.1\|3113116_3113695_+	hypothetical protein	NA	NA	NA	NA
AWP33801.1\|3113754_3114723_-	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	3.6e-45	39.9
AWP33802.1\|3114733_3116581_-	protein translocase subunit SecD	NA	NA	NA	NA
AWP33803.1\|3116606_3116939_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	5.7e-11	37.4
AWP33804.1\|3116938_3118087_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	4.3e-90	46.4

DBSCAN-SWA_6

3176571 : 3185935

Streptococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWP33856.1\|3176571_3176784_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	9.3e-23	71.4
AWP33857.1\|3177161_3178916_-	amylovoran biosynthesis protein AmsF	A0A1S6L3G8	Erwinia_phage	1.9e-153	46.5
AWP33858.1\|3179119_3179413_-	hypothetical protein	NA	NA	NA	NA
AWP33859.1\|3179409_3179757_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	8.3e-21	46.5
AWP33860.1\|3179753_3180221_-	lysozyme	H9C148	Vibrio_phage	1.5e-25	43.3
AWP33861.1\|3180423_3180702_-	hypothetical protein	NA	NA	NA	NA
AWP33862.1\|3181124_3181856_-	chromophore lyase	A0A2I6PIE7	Escherichia_phage	5.4e-46	37.5
AWP33863.1\|3182216_3183470_-	gamma-glutamyl-phosphate reductase	A0A1X9I5D4	Streptococcus_phage	1.3e-92	44.1
AWP33864.1\|3183480_3184584_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.0e-59	42.4
AWP33865.1\|3184822_3185935_+	porin OmpC	Q1MVN1	Enterobacteria_phage	2.1e-110	56.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP022518

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2405 : 56918

Burkholderia_phage(17.65%)

transposase,integrase

attL 20990:21006|attR 52563:52579

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWP35193.1\|2405_3552_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	6.4e-142	90.7
AWP35194.1\|4106_6305_-	DEAD/DEAH box helicase	A0A1B1IUF6	uncultured_Mediterranean_phage	9.7e-06	25.4
AWP35195.1\|6301_7618_-	ATP-binding protein	NA	NA	NA	NA
AWP35196.1\|7618_9934_-	ATPase	NA	NA	NA	NA
AWP35197.1\|10347_10557_-	hypothetical protein	NA	NA	NA	NA
AWP35198.1\|10540_12022_-	lysine transporter	NA	NA	NA	NA
AWP35199.1\|12130_12622_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AWP35334.1\|12742_13690_+	oxidoreductase	NA	NA	NA	NA
AWP35200.1\|14486_14900_-	glyoxalase	NA	NA	NA	NA
AWP35201.1\|14909_15626_+	transcriptional regulator	A0A1B0RXM1	Streptococcus_phage	5.0e-12	30.3
AWP35202.1\|15855_16329_-	hypothetical protein	NA	NA	NA	NA
AWP35203.1\|16441_17131_-	NYN domain-containing protein	NA	NA	NA	NA
AWP35204.1\|17740_18637_-	permease	NA	NA	NA	NA
AWP35205.1\|18690_19290_+	TetR family transcriptional regulator	NA	NA	NA	NA
AWP35206.1\|20639_20897_+	type II toxin-antitoxin system antitoxin, RelB/DinJ family	NA	NA	NA	NA
AWP35207.1\|20896_21172_+	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	NA	NA	NA	NA
20990:21006	attL	NA	NA	NA	NA
AWP35208.1\|22097_22295_-	hypothetical protein	NA	NA	NA	NA
AWP35209.1\|22407_22944_-	hypothetical protein	C7BGE8	Burkholderia_phage	4.0e-14	33.3
AWP35210.1\|23014_23320_-	hypothetical protein	NA	NA	NA	NA
AWP35211.1\|23807_24599_+\|integrase	integrase	I3WFA4	Macacine_betaherpesvirus	3.6e-19	48.5
AWP35212.1\|24931_25588_+	chromosome partitioning protein ParA	E5FFJ3	Burkholderia_phage	1.4e-45	45.8
AWP35213.1\|25632_25902_+	CopG family transcriptional regulator	NA	NA	NA	NA
AWP35214.1\|25997_26246_+	hypothetical protein	NA	NA	NA	NA
AWP35335.1\|26301_26493_+	hypothetical protein	NA	NA	NA	NA
AWP35215.1\|27888_29034_-	sugar ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.9e-22	30.4
AWP35216.1\|29058_29886_-	sugar ABC transporter permease	NA	NA	NA	NA
AWP35217.1\|29878_30739_-	sugar ABC transporter permease	NA	NA	NA	NA
AWP35218.1\|30806_32075_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
AWP35219.1\|32104_33118_-	oxidoreductase	NA	NA	NA	NA
AWP35220.1\|33451_34150_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA
AWP35221.1\|34146_35016_+	N-acetylmannosamine kinase	NA	NA	NA	NA
AWP35222.1\|35027_35795_-	GntR family transcriptional regulator	NA	NA	NA	NA
AWP35223.1\|36153_37273_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	5.1e-43	39.3
AWP35224.1\|37798_38821_+	alpha/beta hydrolase	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	2.2e-61	38.9
AWP35225.1\|41165_41888_-	hypothetical protein	NA	NA	NA	NA
AWP35226.1\|41880_42246_-	hypothetical protein	NA	NA	NA	NA
AWP35227.1\|43100_43970_+	hypothetical protein	NA	NA	NA	NA
AWP35228.1\|43986_44955_+	O-acetylhomoserine aminocarboxypropyltransferase	A0A2I2L687	Orpheovirus	1.6e-08	26.3
AWP35229.1\|44982_45679_+\|transposase	IS1 family transposase	A0A0U2RK18	Escherichia_phage	4.7e-63	48.9
AWP35230.1\|45651_45957_-	hypothetical protein	NA	NA	NA	NA
AWP35231.1\|46325_46529_+	hypothetical protein	NA	NA	NA	NA
AWP35232.1\|46914_47781_+	protein RepA	Q71TL8	Escherichia_phage	8.2e-118	72.7
AWP35233.1\|48992_50201_+	chromosome partitioning protein ParA	Q1MVJ3	Enterobacteria_phage	1.3e-172	74.8
AWP35234.1\|50197_51175_+	chromosome partitioning protein ParB	Q1MVJ4	Enterobacteria_phage	2.6e-88	56.2
AWP35235.1\|53134_54254_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	5.1e-43	39.3
52563:52579	attR	NA	NA	NA	NA
AWP35236.1\|54574_55201_+	cobyrinic acid ac-diamide synthase	E5FFJ3	Burkholderia_phage	1.3e-16	30.1
AWP35237.1\|55197_55503_+	hypothetical protein	NA	NA	NA	NA
AWP35238.1\|56015_56918_+\|transposase	IS5/IS1182 family transposase	Q1MVF0	Enterobacteria_phage	5.0e-142	80.3

DBSCAN-SWA_2

119032 : 172766

Stx2-converting_phage(27.27%)

coat,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWP35278.1\|119032_120108_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	8.0e-46	40.9
AWP35279.1\|120154_120589_+	hypothetical protein	NA	NA	NA	NA
AWP35280.1\|120614_121442_-	RpiR family transcriptional regulator	NA	NA	NA	NA
AWP35281.1\|121616_123176_+	PTS glucose transporter subunit IIB	A0A2I7SAJ6	Vibrio_phage	3.9e-09	44.9
AWP35282.1\|123172_123871_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA
AWP35339.1\|124499_124736_-	impB/mucB/samB family protein	F1C5A5	Cronobacter_phage	8.4e-25	67.1
AWP35283.1\|125799_126327_-	hypothetical protein	NA	NA	NA	NA
AWP35284.1\|126323_126635_-	transcriptional regulator	NA	NA	NA	NA
AWP35285.1\|126777_126900_-	impB/mucB/samB family protein	I6RSM4	Salmonella_phage	3.0e-10	82.4
AWP35286.1\|127297_128209_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AWP35287.1\|128196_128970_+	sulfate ABC transporter permease	NA	NA	NA	NA
AWP35288.1\|129166_130314_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	6.4e-142	90.7
AWP35289.1\|131276_131747_+	hypothetical protein	NA	NA	NA	NA
AWP35290.1\|132720_133155_+	hypothetical protein	NA	NA	NA	NA
AWP35291.1\|133592_133853_+	hypothetical protein	NA	NA	NA	NA
AWP35292.1\|134118_134382_-	hypothetical protein	NA	NA	NA	NA
AWP35293.1\|134458_134722_+	hypothetical protein	NA	NA	NA	NA
AWP35294.1\|135050_135164_-	hypothetical protein	NA	NA	NA	NA
AWP35295.1\|135425_136457_+	recombinase Cre	Q5XLQ5	Enterobacteria_phage	2.8e-64	39.0
AWP35296.1\|136592_137366_+	nucleotidyltransferase	NA	NA	NA	NA
AWP35297.1\|138082_139202_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	5.1e-43	39.3
AWP35298.1\|139580_140399_+	AraC family transcriptional regulator	NA	NA	NA	NA
AWP35299.1\|140369_141008_-	lysine transporter LysE	NA	NA	NA	NA
AWP35300.1\|144159_145485_-	nucleobase:cation symporter	NA	NA	NA	NA
AWP35301.1\|145541_146666_-	aryl sulfotransferase	NA	NA	NA	NA
AWP35302.1\|146869_147880_+	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	1.9e-09	24.9
AWP35303.1\|149231_149963_-	peptidase	NA	NA	NA	NA
AWP35304.1\|150305_151601_-	D-amino-acid oxidase	NA	NA	NA	NA
AWP35305.1\|151617_152040_-	hypothetical protein	NA	NA	NA	NA
AWP35306.1\|152065_153205_-	ornithine cyclodeaminase	NA	NA	NA	NA
AWP35307.1\|153359_154196_+	AraC family transcriptional regulator	NA	NA	NA	NA
AWP35308.1\|154337_155726_+	amino acid permease	NA	NA	NA	NA
AWP35309.1\|157038_157587_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AWP35310.1\|157937_158801_+	alpha/beta hydrolase	NA	NA	NA	NA
AWP35311.1\|160927_161275_-\|transposase	transposase	A0A0P0ZBY2	Stx2-converting_phage	1.5e-41	70.4
AWP35340.1\|161271_161745_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	1.8e-18	42.2
AWP35312.1\|162435_163062_-	hypothetical protein	NA	NA	NA	NA
AWP35313.1\|163646_163934_+	hypothetical protein	NA	NA	NA	NA
AWP35341.1\|164000_164894_+	DNA-binding protein	NA	NA	NA	NA
AWP35314.1\|165912_166380_+	N-acetyltransferase	NA	NA	NA	NA
AWP35342.1\|166650_167163_-	CpmK protein	NA	NA	NA	NA
AWP35315.1\|167192_167741_-	CpmJ protein	NA	NA	NA	NA
AWP35316.1\|167737_168601_-\|coat	spore coat protein CotH	NA	NA	NA	NA
AWP35317.1\|170973_171636_-	hypothetical protein	NA	NA	NA	NA
AWP35318.1\|171685_172159_-	hypothetical protein	NA	NA	NA	NA
AWP35319.1\|172418_172766_+\|transposase	transposase	A0A0P0ZDM8	Stx2-converting_phage	6.1e-40	68.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP020820

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP022518

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection