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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP029743 Escherichia coli strain AR_0085 plasmid unnamed2, complete sequence 0 crisprs csa3,DEDDh 0 0 1 0
CP029744 Escherichia coli strain AR_0085 plasmid unnamed3, complete sequence 0 crisprs RT,csa3,DEDDh 0 0 1 0
CP029741 Escherichia coli strain AR_0085 chromosome, complete genome 0 crisprs c2c9_V-U4,DEDDh,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,PD-DExK,DinG 0 0 15 0
CP029742 Escherichia coli strain AR_0085 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 2 0

Results visualization

1. CP029743
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 6152 : 46877 43 Salmonella_phage(15.38%) integrase,transposase attL 958:978|attR 43015:43035
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP029742
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 56029 : 109190 56 Pseudomonas_phage(16.67%) integrase,transposase,tRNA attL 51630:51644|attR 68860:68874
DBSCAN-SWA_2 127792 : 132895 8 Escherichia_phage(33.33%) integrase attL 127707:127719|attR 130022:130034
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP029744
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 36603 : 86266 39 Escherichia_phage(30.77%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. CP029741
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 115272 : 200023 106 Enterobacteria_phage(40.68%) holin,portal,capsid,lysis,integrase,tail,transposase,terminase,head attL 168944:168959|attR 200561:200576
DBSCAN-SWA_2 352433 : 361874 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_3 563028 : 621856 66 Enterobacteria_phage(75.61%) portal,capsid,integrase,tail,tRNA,transposase,plate,terminase attL 578209:578228|attR 615915:615934
DBSCAN-SWA_4 788477 : 834265 58 Escherichia_phage(64.81%) holin,terminase,integrase,tail attL 790316:790332|attR 831151:831167
DBSCAN-SWA_5 1029626 : 1043392 12 Escherichia_phage(50.0%) transposase NA
DBSCAN-SWA_6 1271827 : 1314405 48 Ralstonia_phage(15.38%) transposase,integrase,tRNA attL 1303255:1303270|attR 1306320:1306335
DBSCAN-SWA_7 2119275 : 2174809 47 Stx2-converting_phage(24.14%) transposase,holin,integrase,tRNA attL 2112962:2112976|attR 2176387:2176401
DBSCAN-SWA_8 2637510 : 2694484 71 Enterobacteria_phage(56.6%) lysis,integrase,tail,tRNA,terminase attL 2685702:2685716|attR 2698426:2698440
DBSCAN-SWA_9 2947221 : 2956618 7 Stx2-converting_phage(83.33%) transposase NA
DBSCAN-SWA_10 3003060 : 3066785 56 Vibrio_phage(15.38%) transposase,tRNA,protease NA
DBSCAN-SWA_11 3788196 : 3869993 95 Enterobacteria_phage(48.48%) capsid,lysis,integrase,tail,tRNA,transposase,terminase,protease,head attL 3818714:3818760|attR 3836414:3836460
DBSCAN-SWA_12 4066836 : 4081828 19 Enterobacteria_phage(60.0%) lysis,tail NA
DBSCAN-SWA_13 4163204 : 4275851 138 Salmonella_phage(36.26%) portal,capsid,integrase,tail,tRNA,plate,protease,head attL 4163989:4164005|attR 4223736:4223752
DBSCAN-SWA_14 4790613 : 4829908 39 Escherichia_phage(20.0%) transposase,protease NA
DBSCAN-SWA_15 4919427 : 4936421 18 Enterobacteria_phage(36.36%) tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage