CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP029738	Klebsiella pneumoniae strain AR_0087 chromosome, complete genome	0 crisprs	cas3,RT,csa3,DinG,WYL,DEDDh	9
CP029740	Klebsiella pneumoniae strain AR_0087 plasmid unnamed2, complete sequence	0 crisprs	RT	2
CP029739	Klebsiella pneumoniae strain AR_0087 plasmid unnamed1, complete sequence	0 crisprs	WYL,RT	2

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

678203 : 689091

Escherichia_phage(87.5%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS72196.1\|678203_681311_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
AWS72197.1\|681365_682631_+	MFS transporter	NA	NA	NA	NA
AWS72198.1\|682661_683750_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.8e-210	99.7
AWS72199.1\|683836_684097_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
AWS72200.1\|684394_685255_+	class A broad-spectrum beta-lactamase SHV-1	A0A077SL40	Escherichia_phage	4.4e-156	99.7
AWS72201.1\|685275_686037_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AWS72202.1\|686027_686261_+	hypothetical protein	NA	NA	NA	NA
AWS72203.1\|686298_687201_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
AWS72204.1\|687212_688478_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.3
AWS72205.1\|688470_689091_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_2

863733 : 952483

101

Klebsiella_phage(62.96%)

portal,protease,capsid,tRNA,terminase,tail,holin,plate,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS72364.1\|863733_864669_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	3.5e-138	93.0
AWS72365.1\|864714_866088_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	8.6e-53	32.3
AWS72366.1\|866102_866297_-	hypothetical protein	NA	NA	NA	NA
AWS72367.1\|866613_867597_-	zinc transporter ZntB	NA	NA	NA	NA
AWS72368.1\|867666_867858_+	hypothetical protein	NA	NA	NA	NA
AWS76474.1\|867876_868620_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.0e-15	30.1
AWS72369.1\|868636_869701_+	oxidoreductase	NA	NA	NA	NA
AWS72370.1\|869937_870132_+	hypothetical protein	NA	NA	NA	NA
AWS72371.1\|870244_870991_-	hypothetical protein	NA	NA	NA	NA
AWS72372.1\|871281_871950_-	ABC transporter permease	NA	NA	NA	NA
AWS72373.1\|872963_873770_-	methionine-binding protein	NA	NA	NA	NA
AWS72374.1\|873990_875166_+	aspartate aminotransferase	NA	NA	NA	NA
AWS72375.1\|875210_876245_-	NADP-dependent oxidoreductase	NA	NA	NA	NA
AWS72376.1\|876333_876882_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AWS72377.1\|876936_877848_-	NmrA/HSCARG family protein	NA	NA	NA	NA
AWS72378.1\|877840_878707_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
AWS72379.1\|878797_879721_+	LysR family transcriptional regulator	NA	NA	NA	NA
AWS72380.1\|879740_880646_-	LysR family transcriptional regulator	NA	NA	NA	NA
AWS72381.1\|880790_881720_+	aromatic alcohol reductase	NA	NA	NA	NA
AWS72382.1\|881745_881952_+	DUF1471 domain-containing protein	NA	NA	NA	NA
AWS72383.1\|882002_882881_-	AraC family transcriptional regulator	NA	NA	NA	NA
AWS72384.1\|883039_883795_+	KR domain-containing protein	NA	NA	NA	NA
AWS72385.1\|883799_884393_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AWS72386.1\|884466_885180_+	oxidoreductase	NA	NA	NA	NA
AWS72387.1\|885246_885741_-	hypothetical protein	NA	NA	NA	NA
AWS72388.1\|885869_886412_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AWS72389.1\|886389_887475_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AWS72390.1\|887438_889193_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AWS72391.1\|889271_890864_-	type VI secretion system protein TssA	NA	NA	NA	NA
AWS72392.1\|890860_894310_-	type VI secretion protein VasK	NA	NA	NA	NA
AWS72393.1\|894299_895481_-	hypothetical protein	NA	NA	NA	NA
AWS72394.1\|895429_895687_-	PAAR domain-containing protein	NA	NA	NA	NA
AWS72395.1\|895729_898129_-	DUF2235 domain-containing protein	NA	NA	NA	NA
AWS72396.1\|898116_898647_-	DUF3304 domain-containing protein	NA	NA	NA	NA
AWS72397.1\|898671_899448_-	DUF4123 domain-containing protein	NA	NA	NA	NA
AWS72398.1\|899451_901830_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	2.4e-18	33.0
AWS72399.1\|901822_904477_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	7.7e-98	33.4
AWS72400.1\|904741_905233_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AWS72401.1\|905237_906944_-	OmpA family protein	NA	NA	NA	NA
AWS72402.1\|906940_907630_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AWS76475.1\|907626_908967_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AWS72403.1\|908979_910524_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AWS72404.1\|910566_911058_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AWS72405.1\|911903_912152_+	damage-inducible protein DinI	S5MQI1	Escherichia_phage	1.0e-25	70.4
AWS72406.1\|912559_912982_-	hypothetical protein	K7P834	Enterobacteria_phage	3.6e-26	45.3
AWS72407.1\|913059_913242_-	Hin recombinase	A0A286S1P7	Klebsiella_phage	2.6e-18	87.0
AWS72408.1\|913253_914054_-	hypothetical protein	NA	NA	NA	NA
AWS72409.1\|916103_919172_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	97.2
AWS72410.1\|919168_919549_-	nitrite transporter	A0A286S2A6	Klebsiella_phage	1.8e-72	99.2
AWS72411.1\|919558_920041_-	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	6.0e-86	98.8
AWS72412.1\|920027_920507_-	hypothetical protein	A0A286S298	Klebsiella_phage	1.7e-93	98.7
AWS72413.1\|920506_922954_-\|tail	phage tail tape measure protein	A0A286S1S3	Klebsiella_phage	5.9e-278	66.5
AWS72414.1\|922998_923466_-	hypothetical protein	NA	NA	NA	NA
AWS72415.1\|923531_923795_-\|tail	phage tail protein	A0A286S1P2	Klebsiella_phage	5.9e-43	98.8
AWS72416.1\|923827_924181_-\|tail	phage tail protein	A0A286S1N4	Klebsiella_phage	4.9e-61	99.1
AWS72417.1\|924224_924716_-\|tail	phage tail protein	A0A286S1Q8	Klebsiella_phage	2.3e-88	100.0
AWS72418.1\|924771_925137_-	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	3.9e-61	92.6
AWS72419.1\|925133_925673_-	hypothetical protein	A0A286S249	Klebsiella_phage	3.0e-94	99.4
AWS72420.1\|925665_925998_-\|head,tail	head-tail adaptor protein	A0A286S2A2	Klebsiella_phage	1.0e-55	98.2
AWS72421.1\|925999_926197_-	hypothetical protein	A0A286S2A5	Klebsiella_phage	2.4e-25	96.9
AWS72422.1\|926257_926584_-\|head,tail	phage gp6-like head-tail connector protein	A0A286S294	Klebsiella_phage	9.8e-56	99.1
AWS72423.1\|926810_927974_-\|capsid	phage major capsid protein	A0A286S1R4	Klebsiella_phage	3.8e-211	99.2
AWS72424.1\|927985_928666_-\|head,protease	HK97 family phage prohead protease	A0A286S1N1	Klebsiella_phage	2.7e-124	99.6
AWS72425.1\|928671_929949_-\|portal	phage portal protein	A0A286S1N5	Klebsiella_phage	6.2e-247	100.0
AWS72426.1\|929951_931484_-\|terminase	terminase	A0A286S1M9	Klebsiella_phage	3.9e-296	100.0
AWS72427.1\|931493_931928_-	hypothetical protein	A0A286S1P9	Klebsiella_phage	6.2e-74	100.0
AWS72428.1\|932049_932259_-	serine acetyltransferase	A0A286N2R4	Klebsiella_phage	2.4e-23	84.1
AWS72429.1\|932271_932562_-	HNH endonuclease	A0A286N2R3	Klebsiella_phage	2.9e-51	94.8
AWS72430.1\|932632_932839_-	DUF551 domain-containing protein	A0A286N2R2	Klebsiella_phage	1.1e-33	97.1
AWS72431.1\|932919_933156_-	DUF2560 domain-containing protein	A0A286N2R1	Klebsiella_phage	1.6e-31	94.9
AWS72432.1\|933287_933548_+	hypothetical protein	NA	NA	NA	NA
AWS72433.1\|933480_933753_-	hypothetical protein	NA	NA	NA	NA
AWS72434.1\|933885_934170_+	hypothetical protein	NA	NA	NA	NA
AWS72435.1\|934260_934455_-	hypothetical protein	A0A286SGR9	Klebsiella_phage	1.5e-24	85.9
AWS72436.1\|934405_934681_-	hypothetical protein	G8C7W1	Escherichia_phage	9.9e-09	41.6
AWS72437.1\|934688_935318_-	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	6.9e-106	90.9
AWS72438.1\|935317_935599_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	3.9e-37	80.6
AWS72439.1\|935585_935981_-	hypothetical protein	K7PHB9	Enterobacterial_phage	2.6e-63	98.5
AWS76476.1\|936543_936990_+	hypothetical protein	NA	NA	NA	NA
AWS76477.1\|936895_937153_-	hypothetical protein	A0A286N2Q3	Klebsiella_phage	1.3e-42	100.0
AWS72440.1\|937306_938089_-	antitermination protein	F1C595	Cronobacter_phage	6.5e-114	79.1
AWS72441.1\|938085_939048_-	DNA primase	A0A286N2Q0	Klebsiella_phage	3.1e-182	98.8
AWS72442.1\|939049_940708_-	ATP-dependent helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	97.5
AWS72443.1\|940749_941118_-	hypothetical protein	A0A286S263	Klebsiella_phage	6.7e-53	82.8
AWS72444.1\|941379_941664_-	hypothetical protein	A0A1B5FPB9	Escherichia_phage	1.1e-31	70.2
AWS72445.1\|941788_942022_-	Cro/Cl family transcriptional regulator	A0A1B5FPK9	Escherichia_phage	4.9e-17	63.9
AWS72446.1\|942162_942837_+	helix-turn-helix transcriptional regulator	A0A1B5FPF4	Escherichia_phage	8.7e-99	78.6
AWS72447.1\|943000_943414_+	hypothetical protein	NA	NA	NA	NA
AWS72448.1\|943596_943821_+	hypothetical protein	NA	NA	NA	NA
AWS72449.1\|943821_944187_+	hypothetical protein	A0A286S1Q6	Klebsiella_phage	5.8e-57	97.5
AWS72450.1\|944179_944434_+	hypothetical protein	A0A286SGR4	Klebsiella_phage	1.4e-36	89.3
AWS72451.1\|944620_945061_+	hypothetical protein	A0A286S1S2	Klebsiella_phage	7.5e-59	80.8
AWS72452.1\|945101_945620_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	9.4e-93	97.7
AWS72453.1\|945625_946351_+	DNA-binding protein	A0A286S260	Klebsiella_phage	1.4e-131	99.6
AWS72454.1\|946340_946565_+	hypothetical protein	A0A286S2B3	Klebsiella_phage	1.7e-30	94.6
AWS72455.1\|946561_947446_+	hypothetical protein	A0A2H4FNA9	Salmonella_phage	5.1e-06	70.6
AWS72456.1\|947624_947867_+	AlpA family transcriptional regulator	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
AWS72457.1\|947847_949029_-	DUF4102 domain-containing protein	A0A0M4QX09	Salmonella_phage	1.3e-201	84.2
AWS72458.1\|949225_949774_+	DJ-1/PfpI family protein	NA	NA	NA	NA
AWS72459.1\|949972_951505_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.5e-21	30.0
AWS72460.1\|951721_952483_-	KR domain-containing protein	Q06VL0	Trichoplusia_ni_ascovirus	3.1e-20	32.1

DBSCAN-SWA_3

1108941 : 1155079

Enterobacteria_phage(54.55%)

portal,capsid,tRNA,terminase,integrase,tail,plate

attL 1114169:1114186|attR 1151345:1151362

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS72606.1\|1108941_1109442_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
AWS72607.1\|1109558_1110005_+	DUF441 domain-containing protein	NA	NA	NA	NA
AWS76481.1\|1109988_1110780_-	AraC family transcriptional regulator	NA	NA	NA	NA
AWS72608.1\|1110881_1112066_+	cyanate MFS transporter	NA	NA	NA	NA
AWS72609.1\|1112097_1112790_-	hypothetical protein	NA	NA	NA	NA
AWS72610.1\|1112935_1113445_+	DUF523 domain-containing protein	NA	NA	NA	NA
AWS72611.1\|1113431_1113788_+	DUF488 domain-containing protein	NA	NA	NA	NA
AWS72612.1\|1113777_1114017_-	DUF333 domain-containing protein	NA	NA	NA	NA
1114169:1114186	attL	NA	NA	NA	NA
AWS72613.1\|1114281_1114533_-	hypothetical protein	A0A2I8TV89	Erwinia_phage	3.4e-08	49.2
AWS72614.1\|1114576_1115716_-	phage late control D family protein	B9A7A9	Serratia_phage	9.4e-146	72.3
AWS72615.1\|1115870_1117043_+\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	5.0e-158	70.7
AWS72616.1\|1117042_1117558_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	2.2e-57	61.2
AWS72617.1\|1117603_1117921_+\|tail	phage tail protein	B9A7B2	Serratia_phage	1.0e-17	54.8
AWS76482.1\|1117920_1118079_+\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	3.5e-11	63.3
AWS72618.1\|1118065_1121041_+\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	2.0e-219	46.4
AWS72619.1\|1121056_1121530_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	6.6e-53	66.9
AWS72620.1\|1121993_1122656_-	hypothetical protein	NA	NA	NA	NA
AWS72621.1\|1122673_1123897_-	DUF262 domain-containing protein	A0A1V0S9I8	Catovirus	7.8e-05	27.5
AWS72622.1\|1124496_1125594_-\|tail	phage tail protein	G4KKN6	Yersinia_phage	5.2e-08	47.8
AWS72623.1\|1125593_1125806_-	hypothetical protein	NA	NA	NA	NA
AWS72624.1\|1125802_1128829_-\|tail	phage tail protein I	D5LGZ2	Escherichia_phage	6.4e-24	40.7
AWS72625.1\|1128818_1129742_-\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	7.6e-53	43.6
AWS72626.1\|1129743_1130094_-\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	1.8e-23	58.2
AWS72627.1\|1130090_1130678_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	6.9e-60	60.5
AWS72628.1\|1130674_1131310_-	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	4.6e-57	51.9
AWS72629.1\|1131306_1131774_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	4.5e-46	58.8
AWS76483.1\|1131955_1132285_-	DUF2570 domain-containing protein	NA	NA	NA	NA
AWS72630.1\|1132296_1132842_-	lysozyme	Q1I0Z1	Pasteurella_virus	6.3e-31	43.0
AWS72631.1\|1132838_1133123_-\|tail	phage tail protein	NA	NA	NA	NA
AWS72632.1\|1133113_1133314_-\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	1.6e-16	63.1
AWS72633.1\|1133313_1133829_-\|capsid	capsid assembly protein	A0A0A7NPU2	Enterobacteria_phage	2.7e-39	48.8
AWS72634.1\|1133941_1134799_-\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	9.8e-71	61.3
AWS72635.1\|1134848_1135883_-\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	3.6e-96	50.0
AWS72636.1\|1135892_1136732_-\|capsid	phage capsid protein	A0A0A7NRY7	Enterobacteria_phage	4.3e-95	66.3
AWS72637.1\|1136888_1138616_+	oxidoreductase	A0A0A7NV54	Enterobacteria_phage	1.0e-228	67.1
AWS72638.1\|1138609_1139671_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	9.1e-143	68.1
AWS72639.1\|1140515_1141307_+	hypothetical protein	NA	NA	NA	NA
AWS72640.1\|1141306_1143577_+	DNA helicase UvrD	NA	NA	NA	NA
AWS72641.1\|1146466_1147423_-	DNA adenine methylase	A0A0M4QWR0	Salmonella_phage	1.5e-83	54.4
AWS72642.1\|1147419_1147647_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	2.5e-05	41.0
AWS72643.1\|1147655_1148222_-	3'-5' exoribonuclease	D4HTX2	Vibrio_phage	2.8e-13	33.2
AWS72644.1\|1148218_1148443_-	hypothetical protein	NA	NA	NA	NA
AWS72645.1\|1148511_1148784_-	hypothetical protein	NA	NA	NA	NA
AWS72646.1\|1148799_1149177_-	hypothetical protein	NA	NA	NA	NA
AWS72647.1\|1149192_1149411_-	DUF4761 domain-containing protein	A0A0M5M1I3	Salmonella_phage	3.6e-06	49.1
AWS72648.1\|1149431_1149710_-	hypothetical protein	Q1JS60	Enterobacteria_phage	6.2e-43	88.9
AWS72649.1\|1149830_1150130_+	XRE family transcriptional regulator	Q1JS61	Enterobacteria_phage	6.5e-38	77.8
AWS72650.1\|1150245_1151229_+\|integrase	integrase	Q83VS6	Escherichia_phage	1.4e-150	79.8
AWS72651.1\|1151493_1152507_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.9e-12	29.0
1151345:1151362	attR	NA	NA	NA	NA
AWS72652.1\|1152564_1152666_+	hypothetical protein	NA	NA	NA	NA
AWS76484.1\|1152623_1152740_+	hypothetical protein	NA	NA	NA	NA
AWS72653.1\|1152857_1152983_+	hypothetical protein	NA	NA	NA	NA
AWS72654.1\|1153042_1153306_-	DUF2534 domain-containing protein	NA	NA	NA	NA
AWS72655.1\|1153436_1154075_-	leucine efflux protein	NA	NA	NA	NA
AWS72656.1\|1154164_1155079_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4

DBSCAN-SWA_4

1417567 : 1427041

Brazilian_cedratvirus(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS72884.1\|1417567_1419289_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
AWS72885.1\|1419333_1420035_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AWS72886.1\|1420388_1420607_+	translation initiation factor IF-1	NA	NA	NA	NA
AWS72887.1\|1420737_1423017_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
AWS72888.1\|1423047_1423365_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
AWS72889.1\|1423690_1423912_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AWS72890.1\|1423845_1424049_-	hypothetical protein	NA	NA	NA	NA
AWS72891.1\|1423988_1425929_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
AWS72892.1\|1425925_1427041_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

DBSCAN-SWA_5

1894002 : 1964413

Cronobacter_phage(24.07%)

coat,transposase,tRNA,terminase,integrase,tail,lysis,head

attL 1910603:1910649|attR 1961484:1961530

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS73302.1\|1894002_1895520_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	9.5e-85	36.3
AWS73303.1\|1895851_1897327_-	dipeptide permease	A0A0P0IY73	Acinetobacter_phage	5.3e-48	29.0
AWS73304.1\|1897386_1899534_-	lysine decarboxylase CadA	NA	NA	NA	NA
AWS73305.1\|1900755_1901679_-\|transposase	IS5-like element IS903B family transposase	Q9MCT5	Escherichia_phage	1.1e-176	99.3
AWS73306.1\|1902382_1903951_-	transcriptional regulator CadC	NA	NA	NA	NA
AWS73307.1\|1904244_1904517_-	DUF1471 domain-containing protein	NA	NA	NA	NA
AWS73308.1\|1904617_1905538_-	lipid A biosynthesis lauroyl acyltransferase	A0A1W6JP29	Morganella_phage	5.4e-51	40.1
AWS73309.1\|1906048_1906915_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AWS73310.1\|1906987_1908292_-	citrate synthase	NA	NA	NA	NA
AWS73311.1\|1908802_1908973_+	ATP-NAD kinase	NA	NA	NA	NA
AWS73312.1\|1909051_1909453_-	hydroxyisourate hydrolase	NA	NA	NA	NA
AWS73313.1\|1909848_1910142_-	hypothetical protein	NA	NA	NA	NA
1910603:1910649	attL	NA	NA	NA	NA
AWS73314.1\|1910804_1911011_-	hypothetical protein	K7PGV5	Enterobacterial_phage	3.3e-09	49.2
AWS73315.1\|1911120_1911360_-	hypothetical protein	K7P7N3	Enterobacteria_phage	4.2e-16	51.9
AWS73316.1\|1911438_1912923_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AWS73317.1\|1913374_1914175_-	hypothetical protein	NA	NA	NA	NA
AWS73318.1\|1916260_1918738_-\|tail	phage tail protein	F1C5A7	Cronobacter_phage	1.4e-197	45.3
AWS73319.1\|1918724_1919120_-	hypothetical protein	F1C5F2	Cronobacter_phage	4.7e-36	54.8
AWS73320.1\|1919116_1919587_-	hypothetical protein	R9TPR6	Aeromonas_phage	1.2e-27	40.4
AWS76523.1\|1919586_1920006_-	hypothetical protein	A0A2P1MXB5	Escherichia_phage	1.8e-30	47.8
AWS73321.1\|1920176_1920590_+	hypothetical protein	G0ZNE8	Cronobacter_phage	5.0e-65	89.8
AWS73322.1\|1920609_1920789_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
AWS73323.1\|1920829_1924270_-	hypothetical protein	Q5G8W8	Enterobacteria_phage	7.3e-133	40.5
AWS73324.1\|1924364_1924868_-	hypothetical protein	NA	NA	NA	NA
AWS76524.1\|1924970_1925198_-	hypothetical protein	NA	NA	NA	NA
AWS73325.1\|1925421_1925610_+	hypothetical protein	NA	NA	NA	NA
AWS76525.1\|1925661_1925982_-	hypothetical protein	NA	NA	NA	NA
AWS73326.1\|1925989_1926328_-	hypothetical protein	NA	NA	NA	NA
AWS73327.1\|1926464_1926938_+	hypothetical protein	A0A077K9U2	Edwardsiella_phage	2.1e-14	40.6
AWS73328.1\|1926974_1927406_-	hypothetical protein	NA	NA	NA	NA
AWS73329.1\|1927778_1928084_-	hypothetical protein	NA	NA	NA	NA
AWS73330.1\|1928388_1929072_-	hypothetical protein	G0ZNE7	Cronobacter_phage	2.3e-75	59.7
AWS73331.1\|1929124_1929877_-	DNA breaking-rejoining protein	G0ZNE6	Cronobacter_phage	1.7e-42	41.8
AWS73332.1\|1929945_1930338_-	hypothetical protein	G0ZNE4	Cronobacter_phage	2.0e-34	51.9
AWS73333.1\|1930334_1930760_-	hypothetical protein	R9TPP7	Aeromonas_phage	5.1e-28	47.9
AWS73334.1\|1930762_1931125_-	hypothetical protein	A0A0M3LSC9	Mannheimia_phage	3.3e-20	49.2
AWS73335.1\|1931124_1931298_-	50S ribosomal protein L13	Q5G8X7	Enterobacteria_phage	1.2e-12	51.8
AWS73336.1\|1931297_1931678_-	hypothetical protein	F1C5E2	Cronobacter_phage	1.8e-29	56.1
AWS73337.1\|1931680_1931956_-	hypothetical protein	NA	NA	NA	NA
AWS73338.1\|1931966_1933061_-\|coat	phage coat protein	F1C5E1	Cronobacter_phage	2.2e-123	62.8
AWS73339.1\|1933072_1933501_-	hypothetical protein	F1C5E0	Cronobacter_phage	8.1e-42	60.8
AWS73340.1\|1933504_1934890_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	1.5e-153	59.7
AWS73341.1\|1935412_1936426_-\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	1.5e-110	67.5
AWS73342.1\|1936358_1937822_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	4.0e-149	56.1
AWS73343.1\|1937834_1939133_-\|terminase	PBSX family phage terminase large subunit	Q5G8Y7	Enterobacteria_phage	3.0e-241	94.3
AWS73344.1\|1939116_1939584_-	DUF2280 domain-containing protein	I6S1P9	Salmonella_phage	1.5e-57	73.8
AWS73345.1\|1939614_1940241_-	hypothetical protein	I6S676	Salmonella_phage	8.4e-104	84.9
AWS73346.1\|1940357_1940969_+	hypothetical protein	NA	NA	NA	NA
AWS76526.1\|1941090_1941549_+	hypothetical protein	NA	NA	NA	NA
AWS73347.1\|1941649_1941844_-	hypothetical protein	NA	NA	NA	NA
AWS73348.1\|1942122_1942590_-\|lysis	lysis protein	A0A192Y689	Salmonella_phage	1.0e-53	71.6
AWS73349.1\|1942586_1943117_-	lysozyme	G9L6J6	Escherichia_phage	5.4e-80	79.7
AWS73350.1\|1943119_1943368_-\|lysis	lysis protein	NA	NA	NA	NA
AWS73351.1\|1943795_1944320_+	hypothetical protein	NA	NA	NA	NA
AWS73352.1\|1944664_1945354_-	antiterminator	I6PDF8	Cronobacter_phage	1.9e-56	54.5
AWS73353.1\|1945350_1945491_-	YlcG family protein	NA	NA	NA	NA
AWS73354.1\|1945487_1946123_-	NinG family protein	M9NYX8	Enterobacteria_phage	1.5e-79	76.5
AWS73355.1\|1946115_1946286_-	NinE family protein	G8C7V4	Escherichia_phage	5.7e-15	73.2
AWS73356.1\|1946266_1946734_-	recombination protein NinB	Q8VNP6	Enterobacteria_phage	1.5e-33	46.5
AWS73357.1\|1946924_1947182_-	DNA polymerase III subunit theta	G8C7V1	Escherichia_phage	6.4e-26	74.0
AWS73358.1\|1947510_1947708_-	hypothetical protein	NA	NA	NA	NA
AWS73359.1\|1947700_1947967_-	eaa protein	A0A077SLR0	Escherichia_phage	4.6e-27	69.8
AWS73360.1\|1948978_1949497_-	hypothetical protein	G9L6B3	Escherichia_phage	1.8e-91	92.7
AWS73361.1\|1949999_1950197_-	hypothetical protein	NA	NA	NA	NA
AWS73362.1\|1950189_1950453_-	DUF4752 domain-containing protein	T1S9K2	Salmonella_phage	1.3e-29	75.6
AWS73363.1\|1950449_1950872_-	hypothetical protein	R9TME7	Aeromonas_phage	1.5e-11	39.9
AWS73364.1\|1950868_1951171_-	MarR family transcriptional regulator	NA	NA	NA	NA
AWS73365.1\|1951167_1951905_-	Replication protein P	A0A0K2FIT1	Enterobacteria_phage	6.9e-65	55.2
AWS76527.1\|1951901_1952867_-	replication protein	K7PGZ0	Enterobacteria_phage	5.1e-60	78.9
AWS73366.1\|1952926_1953724_-	DNA-binding protein	A0A2H4J902	uncultured_Caudovirales_phage	2.8e-88	67.9
AWS73367.1\|1953809_1954031_-	transcriptional regulator	NA	NA	NA	NA
AWS73368.1\|1954070_1954304_-	transcriptional regulator	A0A2H4FNF3	Salmonella_phage	3.0e-22	70.4
AWS73369.1\|1954408_1955098_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.0e-86	70.6
AWS76528.1\|1955120_1955240_+	hypothetical protein	NA	NA	NA	NA
AWS73370.1\|1955438_1956155_+	hypothetical protein	NA	NA	NA	NA
AWS73371.1\|1956145_1956691_+	PIN domain-containing protein	NA	NA	NA	NA
AWS73372.1\|1956739_1956943_-	hypothetical protein	A0A192Y6Q5	Salmonella_phage	1.0e-18	71.6
AWS73373.1\|1957370_1957565_+	hypothetical protein	NA	NA	NA	NA
AWS73374.1\|1957654_1957939_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.7e-40	81.9
AWS73375.1\|1957955_1958702_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	7.0e-65	67.7
AWS73376.1\|1958698_1959322_+	exonuclease	A0A0S2SY31	Pseudomonas_phage	5.8e-57	59.2
AWS73377.1\|1959350_1959878_+	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	1.1e-56	61.0
AWS73378.1\|1959874_1960093_+	conjugal transfer protein TraR	A0A0N7C211	Escherichia_phage	4.4e-12	52.2
AWS76529.1\|1960094_1960430_+	DNA-binding protein	NA	NA	NA	NA
AWS76530.1\|1960426_1961470_+\|integrase	site-specific integrase	G8C7S0	Escherichia_phage	2.2e-178	85.9
AWS73379.1\|1961539_1961863_-	hypothetical protein	NA	NA	NA	NA
1961484:1961530	attR	NA	NA	NA	NA
AWS73380.1\|1961901_1962768_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
AWS73381.1\|1962769_1962982_+	hypothetical protein	NA	NA	NA	NA
AWS73382.1\|1963027_1964413_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4

DBSCAN-SWA_6

4324638 : 4362308

Escherichia_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS75523.1\|4324638_4325343_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWS75524.1\|4326976_4327879_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
AWS75525.1\|4327916_4328150_-	hypothetical protein	NA	NA	NA	NA
AWS75526.1\|4328140_4328902_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AWS75527.1\|4328922_4329783_-	class A extended-spectrum beta-lactamase SHV-12	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AWS75528.1\|4329746_4329929_-	hypothetical protein	NA	NA	NA	NA
AWS75529.1\|4329919_4330624_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWS75530.1\|4332257_4333160_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
AWS75531.1\|4333197_4333431_-	hypothetical protein	NA	NA	NA	NA
AWS75532.1\|4333421_4334183_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AWS75533.1\|4334203_4335064_-	class A extended-spectrum beta-lactamase SHV-12	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AWS75534.1\|4335027_4335210_-	hypothetical protein	NA	NA	NA	NA
AWS75535.1\|4335200_4335905_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWS75536.1\|4338477_4338711_-	hypothetical protein	NA	NA	NA	NA
AWS75537.1\|4338701_4339463_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AWS75538.1\|4339483_4340344_-	class A extended-spectrum beta-lactamase SHV-12	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AWS75539.1\|4340307_4340490_-	hypothetical protein	NA	NA	NA	NA
AWS75540.1\|4340480_4341185_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWS75541.1\|4342817_4343720_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
AWS75542.1\|4343757_4343991_-	hypothetical protein	NA	NA	NA	NA
AWS75543.1\|4343981_4344743_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AWS75544.1\|4344763_4345624_-	class A extended-spectrum beta-lactamase SHV-12	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AWS75545.1\|4345587_4345770_-	hypothetical protein	NA	NA	NA	NA
AWS75546.1\|4345760_4346465_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWS75547.1\|4348098_4349001_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
AWS75548.1\|4349038_4349272_-	hypothetical protein	NA	NA	NA	NA
AWS75549.1\|4349262_4350024_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AWS75550.1\|4350044_4350905_-	class A extended-spectrum beta-lactamase SHV-12	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AWS75551.1\|4350868_4351051_-	hypothetical protein	NA	NA	NA	NA
AWS75552.1\|4351041_4351746_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWS75553.1\|4353379_4354282_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
AWS75554.1\|4354319_4354553_-	hypothetical protein	NA	NA	NA	NA
AWS75555.1\|4354543_4355305_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AWS75556.1\|4355325_4356186_-	class A extended-spectrum beta-lactamase SHV-12	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AWS75557.1\|4356149_4356332_-	hypothetical protein	NA	NA	NA	NA
AWS75558.1\|4356322_4357027_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWS75559.1\|4358660_4359563_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
AWS75560.1\|4359600_4359834_-	hypothetical protein	NA	NA	NA	NA
AWS75561.1\|4359824_4360586_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AWS75562.1\|4360606_4361467_-	class A extended-spectrum beta-lactamase SHV-12	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AWS75563.1\|4361430_4361613_-	hypothetical protein	NA	NA	NA	NA
AWS75564.1\|4361603_4362308_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_7

5004804 : 5011707

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS76653.1\|5004804_5005668_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.4e-10	27.5
AWS76126.1\|5005678_5006452_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
AWS76654.1\|5006692_5007586_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
AWS76127.1\|5007831_5009193_-	U32 family peptidase	Q6DW11	Phage_TP	1.8e-207	94.8
AWS76128.1\|5009509_5010232_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
AWS76129.1\|5010228_5011707_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_8

5052271 : 5060650

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS76156.1\|5052271_5053678_+	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	M4QQM4	Ostreococcus_lucimarinus_virus	4.7e-38	28.7
AWS76157.1\|5053901_5054966_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.6e-105	55.0
AWS76158.1\|5054992_5055862_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	7.5e-111	67.0
AWS76159.1\|5055893_5056784_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.7e-28	34.2
AWS76160.1\|5056798_5057353_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.9e-51	57.6
AWS76161.1\|5057532_5058699_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	4.1e-112	54.7
AWS76162.1\|5059645_5060650_-	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	6.1e-32	29.2

DBSCAN-SWA_9

5282359 : 5332782

uncultured_Caudovirales_phage(26.67%)

tail,lysis,terminase,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS76364.1\|5282359_5284003_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	5.7e-136	50.4
AWS76365.1\|5284052_5284529_-	N-acetyltransferase	NA	NA	NA	NA
AWS76366.1\|5284627_5285554_+	LysR family transcriptional regulator	NA	NA	NA	NA
AWS76670.1\|5285857_5287153_+	MFS transporter	Q6JIH2	Burkholderia_virus	9.6e-62	36.8
AWS76367.1\|5287167_5287974_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AWS76368.1\|5288214_5289477_-	DUF3596 domain-containing protein	A0A286S1S8	Klebsiella_phage	1.7e-233	95.0
AWS76369.1\|5289519_5289765_-	excisionase	A0A286S2A4	Klebsiella_phage	1.9e-35	92.1
AWS76370.1\|5289768_5289987_-	conjugal transfer protein TraR	A0A0N7C211	Escherichia_phage	4.4e-12	52.2
AWS76371.1\|5289983_5290511_-	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	1.3e-57	62.2
AWS76372.1\|5290507_5290666_-	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	6.7e-10	58.8
AWS76373.1\|5290662_5291349_-	exonuclease	A0A0M3ULE0	Salmonella_phage	4.8e-113	90.6
AWS76374.1\|5291341_5291728_-	hypothetical protein	A0A221SAP1	Ralstonia_phage	1.4e-16	52.8
AWS76375.1\|5291958_5292804_-	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	2.6e-68	58.8
AWS76376.1\|5292819_5293104_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	4.3e-39	78.7
AWS76377.1\|5293193_5293388_-	hypothetical protein	NA	NA	NA	NA
AWS76378.1\|5293832_5294465_-	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	9.2e-34	40.0
AWS76379.1\|5294564_5294780_+	XRE family transcriptional regulator	Q716D6	Shigella_phage	4.2e-15	60.9
AWS76380.1\|5294829_5295150_+	hypothetical protein	A0A0M4RU01	Salmonella_phage	7.7e-37	69.8
AWS76381.1\|5295236_5296034_+	DNA-binding protein	A0A2H4J902	uncultured_Caudovirales_phage	2.8e-88	67.9
AWS76671.1\|5296093_5297059_+	replication protein	K7PGZ0	Enterobacteria_phage	5.1e-60	78.9
AWS76382.1\|5297055_5297793_+	Replication protein P	A0A0K2FIT1	Enterobacteria_phage	6.9e-65	55.2
AWS76383.1\|5297789_5298092_+	MarR family transcriptional regulator	NA	NA	NA	NA
AWS76384.1\|5298088_5298511_+	hypothetical protein	R9TME7	Aeromonas_phage	1.5e-11	39.9
AWS76385.1\|5298507_5298768_+	DUF4752 domain-containing protein	T1S9K2	Salmonella_phage	1.6e-29	75.6
AWS76386.1\|5299299_5299512_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	8.1e-11	45.5
AWS76387.1\|5299508_5299799_+	hypothetical protein	F1C5B5	Cronobacter_phage	5.7e-07	50.9
AWS76672.1\|5300140_5300554_+	DUF551 domain-containing protein	A0A077SK54	Escherichia_phage	1.1e-11	34.6
AWS76388.1\|5300553_5300802_+	hypothetical protein	NA	NA	NA	NA
AWS76389.1\|5301054_5301510_+	hypothetical protein	K7P7B8	Enterobacteria_phage	4.0e-55	68.2
AWS76390.1\|5301509_5301680_+	NinE family protein	G8C7V4	Escherichia_phage	1.7e-14	73.2
AWS76391.1\|5301672_5302311_+	hypothetical protein	H6WRY9	Salmonella_phage	1.2e-73	68.4
AWS76392.1\|5302307_5302448_+	YlcG family protein	NA	NA	NA	NA
AWS76393.1\|5302444_5303254_+	antitermination protein	M9NZB0	Enterobacteria_phage	1.9e-116	75.1
AWS76394.1\|5304439_5304754_+	hypothetical protein	H6WRZ3	Salmonella_phage	6.3e-44	86.1
AWS76395.1\|5304756_5305260_+	lysozyme	A0A1V0E5Q7	Salmonella_phage	5.0e-75	78.4
AWS76396.1\|5305256_5305724_+\|lysis	lysis protein	Q76H63	Enterobacteria_phage	7.5e-57	73.5
AWS76397.1\|5305932_5306709_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.2e-12	64.2
AWS76398.1\|5306659_5308060_+\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	7.2e-188	69.2
AWS76399.1\|5308297_5309749_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	7.2e-191	68.4
AWS76673.1\|5309804_5310353_+	hypothetical protein	A0A0M4REK0	Salmonella_phage	1.0e-49	56.9
AWS76400.1\|5310398_5310593_+	hypothetical protein	NA	NA	NA	NA
AWS76401.1\|5310602_5311805_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	5.3e-107	52.8
AWS76402.1\|5311808_5312303_+	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	2.1e-49	61.5
AWS76403.1\|5312314_5313256_+	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	7.8e-138	77.4
AWS76404.1\|5313295_5313577_+	hypothetical protein	NA	NA	NA	NA
AWS76405.1\|5313545_5313965_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	1.1e-40	61.5
AWS76406.1\|5313961_5314468_+	hypothetical protein	A0A2H4J488	uncultured_Caudovirales_phage	2.4e-16	37.2
AWS76407.1\|5314467_5314854_+\|head,tail	head-tail adaptor	A0A2H4J1A4	uncultured_Caudovirales_phage	2.8e-49	79.0
AWS76408.1\|5314948_5315389_+	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
AWS76409.1\|5315392_5316538_+	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	77.2
AWS76410.1\|5316547_5316991_+	DUF3277 domain-containing protein	A0A0M5M1K6	Salmonella_phage	2.1e-61	80.0
AWS76411.1\|5316994_5317414_+	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	8.8e-41	63.4
AWS76674.1\|5317455_5317608_+	NTP pyrophosphohydrolase	A0A2H4J1A2	uncultured_Caudovirales_phage	1.4e-17	84.0
AWS76412.1\|5317597_5319601_+	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	5.9e-244	63.2
AWS76413.1\|5319600_5320200_+	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	58.1
AWS76414.1\|5320200_5320503_+	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	5.2e-27	56.2
AWS76415.1\|5320505_5321528_+	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	3.5e-99	54.0
AWS76416.1\|5321527_5321869_+	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	5.1e-23	46.6
AWS76417.1\|5321911_5322130_-	Arc family DNA-binding protein	A0A0M5M1J2	Salmonella_phage	3.6e-06	41.8
AWS76418.1\|5322211_5322391_+	Arc family DNA-binding protein	NA	NA	NA	NA
AWS76675.1\|5322490_5323057_+	hypothetical protein	H6WRU8	Salmonella_phage	1.1e-30	40.6
AWS76419.1\|5323129_5323882_+	hypothetical protein	A0A0P0ZD96	Stx2-converting_phage	4.7e-61	55.6
AWS76420.1\|5323969_5324623_+	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	7.7e-60	63.5
AWS76421.1\|5324624_5324978_+	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	1.8e-50	79.5
AWS76422.1\|5324977_5326177_+	hypothetical protein	A0A0M4RD32	Salmonella_phage	1.3e-161	75.3
AWS76423.1\|5326173_5326947_+	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	1.8e-68	51.0
AWS76424.1\|5326946_5327720_+	hypothetical protein	A0A248SL44	Klebsiella_phage	3.0e-26	49.7
AWS76425.1\|5327738_5329718_+	hypothetical protein	A0A286S1P0	Klebsiella_phage	6.9e-27	28.0
AWS76426.1\|5329727_5330528_+	hypothetical protein	NA	NA	NA	NA
AWS76427.1\|5330979_5332464_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AWS76428.1\|5332542_5332782_+	hypothetical protein	K7P7N3	Enterobacteria_phage	1.1e-16	54.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP029740

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

23235 : 34765

Stx2-converting_phage(37.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS76842.1\|23235_24057_-	DUF945 domain-containing protein	K4F5L3	Cronobacter_phage	1.2e-44	40.1
AWS76843.1\|24876_25710_-	SAM-dependent DNA methyltransferase	A0A2K9V411	Faecalibacterium_phage	1.8e-21	33.5
AWS76844.1\|25760_25907_-	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA
AWS76845.1\|26001_26349_-	hypothetical protein	NA	NA	NA	NA
AWS76846.1\|26405_26759_-	hypothetical protein	A0A248SL90	Klebsiella_phage	5.0e-29	64.2
AWS76847.1\|26760_26880_-	single-stranded DNA-binding protein	NA	NA	NA	NA
AWS76848.1\|27207_28779_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.9e-170	58.7
AWS76849.1\|28798_29146_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
AWS76850.1\|29145_29823_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.3e-21	46.0
AWS76851.1\|29799_29898_+	copper resistance protein	NA	NA	NA	NA
AWS76852.1\|30095_30446_-	hypothetical protein	NA	NA	NA	NA
AWS76853.1\|30442_30715_-	hypothetical protein	NA	NA	NA	NA
AWS76854.1\|30762_31122_-	hypothetical protein	NA	NA	NA	NA
AWS76855.1\|31232_31556_-	theronine dehydrogenase	I3UM57	Rhodobacter_phage	2.3e-09	34.2
AWS76856.1\|31559_32282_-	plasmid SOS inhibition protein A	NA	NA	NA	NA
AWS76857.1\|32278_32710_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
AWS76858.1\|32755_34765_-	hypothetical protein	G8DH78	Emiliania_huxleyi_virus	1.5e-24	27.4

DBSCAN-SWA_2

43972 : 54997

Escherichia_phage(37.5%)

integrase

attL 49870:49882|attR 56590:56602

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS76873.1\|43972_44674_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-26	36.2
AWS76874.1\|45110_45341_-	hypothetical protein	NA	NA	NA	NA
AWS76875.1\|45403_46075_-	Mediator of plasmid stability	NA	NA	NA	NA
AWS76876.1\|46077_47049_-	StbA family protein	A0A222YXF2	Escherichia_phage	1.1e-73	46.8
AWS76877.1\|47297_48782_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AWS76878.1\|48781_49033_-	hypothetical protein	NA	NA	NA	NA
AWS76879.1\|49191_49623_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	2.1e-29	53.3
AWS76880.1\|49622_50894_+	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	5.2e-153	64.0
49870:49882	attL	NA	NA	NA	NA
AWS76881.1\|51305_52181_+	replication initiation protein	Q71TL8	Escherichia_phage	5.6e-82	56.4
AWS76928.1\|52821_53448_+	cobyrinic acid ac-diamide synthase	A0A222YXS3	Escherichia_phage	2.9e-40	43.6
AWS76882.1\|53567_53747_+	Par-like protein	NA	NA	NA	NA
AWS76883.1\|54202_54997_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.5e-52	88.7
56590:56602	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP029739

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2774 : 76133

Enterobacteria_phage(30.43%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS76679.1\|2774_3800_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AWS76680.1\|5674_6837_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.3e-53	43.0
AWS76681.1\|7245_7650_-	DUF2251 domain-containing protein	NA	NA	NA	NA
AWS76682.1\|8331_8610_-	DUF1778 domain-containing protein	NA	NA	NA	NA
AWS76683.1\|8703_8916_-	hypothetical protein	NA	NA	NA	NA
AWS76684.1\|9807_10248_-	hypothetical protein	NA	NA	NA	NA
AWS76802.1\|11348_12272_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	6.2e-172	96.7
AWS76685.1\|14392_15358_-	EamA/RhaT family transporter	NA	NA	NA	NA
AWS76686.1\|15354_16173_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.8e-29	38.3
AWS76687.1\|16177_16840_-	amino acid ABC transporter permease	NA	NA	NA	NA
AWS76688.1\|16836_17508_-	amino acid ABC transporter permease	NA	NA	NA	NA
AWS76689.1\|17531_18380_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AWS76690.1\|18536_19490_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	1.7e-10	24.0
AWS76691.1\|19576_20788_+	creatininase	NA	NA	NA	NA
AWS76692.1\|21126_22050_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	6.9e-171	96.4
AWS76693.1\|22112_22469_-	hypothetical protein	A0A1B0VFY5	Salmonella_phage	2.7e-51	91.6
AWS76694.1\|22534_23005_-	RES domain-containing protein	NA	NA	NA	NA
AWS76695.1\|23001_23445_-	DUF2384 domain-containing protein	NA	NA	NA	NA
AWS76696.1\|24739_26968_-	hypothetical protein	NA	NA	NA	NA
AWS76697.1\|26964_28146_-	metallohydrolase	NA	NA	NA	NA
AWS76698.1\|28282_29137_+	WYL domain-containing protein	NA	NA	NA	NA
AWS76699.1\|29149_29668_+	hypothetical protein	NA	NA	NA	NA
AWS76700.1\|30566_31649_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	2.2e-189	98.3
AWS76701.1\|31770_34845_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	96.1
AWS76702.1\|34896_36150_+	MFS transporter	NA	NA	NA	NA
AWS76703.1\|36206_36377_+	galactoside O-acetyltransferase	NA	NA	NA	NA
AWS76704.1\|36891_37815_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.0e-166	93.2
AWS76705.1\|37818_38106_+	hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	3.2e-34	100.0
AWS76706.1\|39493_39928_-	copper-binding protein	NA	NA	NA	NA
AWS76707.1\|40143_41544_-	sensor histidine kinase	W8CYF6	Bacillus_phage	4.1e-18	26.3
AWS76708.1\|41540_42221_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	8.7e-30	34.4
AWS76709.1\|42275_43205_-	copper resistance protein CopD	NA	NA	NA	NA
AWS76710.1\|43209_43590_-	copper resistance system chaperone PcoC	NA	NA	NA	NA
AWS76711.1\|43629_44526_-	copper resistance protein B	NA	NA	NA	NA
AWS76712.1\|44525_46343_-	multicopper oxidase PcoA	NA	NA	NA	NA
AWS76713.1\|46577_47027_+	copper resistance protein	NA	NA	NA	NA
AWS76714.1\|47315_48053_+	peptidase M23	A0A2H4JAF5	uncultured_Caudovirales_phage	1.2e-11	32.5
AWS76715.1\|48086_48284_-	DUF2933 domain-containing protein	NA	NA	NA	NA
AWS76716.1\|48324_50766_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	4.9e-83	34.9
AWS76717.1\|50893_51334_-	hypothetical protein	NA	NA	NA	NA
AWS76718.1\|51420_54567_-	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	8.0e-62	22.6
AWS76719.1\|54577_55870_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AWS76720.1\|55983_56337_-	copper ABC transporter substrate-binding protein	NA	NA	NA	NA
AWS76721.1\|56365_57751_-	Cu(I)/Ag(I) efflux RND transporter outer membrane protein	NA	NA	NA	NA
AWS76722.1\|57940_58621_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.7e-31	36.0
AWS76723.1\|58613_60089_+	Cu(+)/Ag(+) sensor histidine kinase	W8CYF6	Bacillus_phage	1.0e-27	30.1
AWS76724.1\|60339_60771_+	silver-binding protein SilE	NA	NA	NA	NA
AWS76725.1\|60914_61265_+	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	4.2e-20	53.3
AWS76803.1\|61652_62561_-	HNH endonuclease	NA	NA	NA	NA
AWS76726.1\|63045_64071_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AWS76727.1\|64410_65334_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	6.2e-172	96.7
AWS76728.1\|65429_65909_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	6.7e-69	96.2
AWS76729.1\|66700_67624_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	9.6e-173	97.4
AWS76730.1\|68763_69861_+	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	1.5e-60	42.9
AWS76731.1\|71439_72456_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AWS76732.1\|73706_74243_+	plasmid transfer protein	NA	NA	NA	NA
AWS76733.1\|74561_76133_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.9e-170	58.7

DBSCAN-SWA_2

79259 : 121808

Enterobacteria_phage(21.43%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS76737.1\|79259_80270_-	replication initiation protein	J9Q7H0	Salmonella_phage	1.1e-86	53.5
AWS76738.1\|80299_80581_+	hypothetical protein	NA	NA	NA	NA
AWS76739.1\|80795_81044_-	hypothetical protein	NA	NA	NA	NA
AWS76740.1\|80999_82166_+	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	2.2e-222	96.9
AWS76741.1\|82165_83137_+	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	7.0e-150	86.9
AWS76742.1\|84512_84695_-	DUF4113 domain-containing protein	A0A1W6JNT0	Morganella_phage	9.1e-11	57.1
AWS76743.1\|84891_85332_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	2.6e-19	60.3
AWS76744.1\|85328_85679_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	5.2e-39	63.8
AWS76745.1\|85709_87302_+\|transposase	IS66-like element ISKox1 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.1e-175	61.4
AWS76746.1\|87395_87851_+	hypothetical protein	NA	NA	NA	NA
AWS76747.1\|87910_88414_-	hypothetical protein	NA	NA	NA	NA
AWS76748.1\|88449_90018_-	hypothetical protein	NA	NA	NA	NA
AWS76749.1\|90068_91283_-	ABC transporter permease	NA	NA	NA	NA
AWS76750.1\|91272_91998_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-17	32.8
AWS76751.1\|91997_93965_-	VWA domain-containing protein	NA	NA	NA	NA
AWS76804.1\|93961_94927_-	hypothetical protein	NA	NA	NA	NA
AWS76752.1\|94974_97689_-	hypothetical protein	NA	NA	NA	NA
AWS76753.1\|97688_100757_-	virulence factor SrfB	NA	NA	NA	NA
AWS76754.1\|100774_102133_-	hypothetical protein	NA	NA	NA	NA
AWS76805.1\|102272_103385_-	tellurite resistance domain protein	NA	NA	NA	NA
AWS76755.1\|103466_103949_-	hypothetical protein	NA	NA	NA	NA
AWS76756.1\|104028_104766_-	hypothetical protein	NA	NA	NA	NA
AWS76757.1\|106129_107098_-\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	7.3e-14	28.8
AWS76758.1\|108361_108805_+	hypothetical protein	NA	NA	NA	NA
AWS76759.1\|108814_109222_+	hypothetical protein	NA	NA	NA	NA
AWS76760.1\|109264_110224_+	DNA replication protein	NA	NA	NA	NA
AWS76761.1\|110358_111282_+\|transposase	IS5-like element IS903B family transposase	Q9MCT5	Escherichia_phage	1.1e-176	99.3
AWS76762.1\|111377_112364_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	2.3e-172	97.1
AWS76763.1\|112505_112829_+	hypothetical protein	NA	NA	NA	NA
AWS76764.1\|112980_113298_+	hypothetical protein	NA	NA	NA	NA
AWS76765.1\|113363_114500_-	recombinase	NA	NA	NA	NA
AWS76766.1\|114677_114932_+	hypothetical protein	NA	NA	NA	NA
AWS76767.1\|115300_116224_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.7e-174	98.4
AWS76768.1\|116906_118430_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	8.1e-44	31.7
AWS76769.1\|118723_119134_+	hypothetical protein	NA	NA	NA	NA
AWS76770.1\|119954_120353_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA
AWS76771.1\|120884_121808_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	5.1e-174	97.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP029738

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP029740

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP029739

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection