CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP029724	Klebsiella pneumoniae strain AR_0140 plasmid unnamed2, complete sequence	0 crisprs	RT,csa3	2
CP029722	Klebsiella pneumoniae strain AR_0140 chromosome, complete genome	0 crisprs	RT,cas3,DinG,WYL,DEDDh,csa3	11
CP029723	Klebsiella pneumoniae strain AR_0140 plasmid unnamed1, complete sequence	0 crisprs	RT,csa3	4

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

30729 : 95996

uncultured_Caudovirales_phage(29.41%)

holin,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS87285.1\|30729_31653_+\|transposase	IS5/IS1182 family transposase	Q9MCT5	Escherichia_phage	7.1e-176	98.7
AWS87286.1\|32325_32583_-	hypothetical protein	NA	NA	NA	NA
AWS87287.1\|33202_34639_+	diguanylate cyclase	NA	NA	NA	NA
AWS87288.1\|35621_36899_-	DUF2254 domain-containing protein	NA	NA	NA	NA
AWS87289.1\|36961_38965_-\|holin	high-affinity choline transporter BetT	A0A2I7QNT1	Vibrio_phage	9.7e-21	25.9
AWS87422.1\|39998_41206_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.7e-100	63.2
AWS87290.1\|42634_43066_-	silver-binding protein SilE	NA	NA	NA	NA
AWS87291.1\|43316_44792_-	Cu(+)/Ag(+) sensor histidine kinase	W8CYF6	Bacillus_phage	1.0e-27	30.1
AWS87292.1\|44784_45465_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.1e-31	35.6
AWS87293.1\|45654_47040_+	hypothetical protein	NA	NA	NA	NA
AWS87294.1\|47068_47422_+	copper ABC transporter substrate-binding protein	NA	NA	NA	NA
AWS87295.1\|47535_48828_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AWS87296.1\|48838_51985_+	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	4.0e-61	22.5
AWS87297.1\|52071_52512_+	hypothetical protein	NA	NA	NA	NA
AWS87298.1\|52638_55092_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	9.9e-84	35.5
AWS87299.1\|55132_55330_+	DUF2933 domain-containing protein	NA	NA	NA	NA
AWS87300.1\|55363_56101_-	peptidase M23	A0A2H4JAF5	uncultured_Caudovirales_phage	1.2e-11	32.5
AWS87301.1\|56389_56839_-	copper resistance protein	NA	NA	NA	NA
AWS87302.1\|57072_58890_+	multicopper oxidase PcoA	NA	NA	NA	NA
AWS87303.1\|58889_59786_+	copper resistance protein B	NA	NA	NA	NA
AWS87304.1\|59825_60206_+	copper resistance system chaperone PcoC	NA	NA	NA	NA
AWS87305.1\|60210_61140_+	copper resistance protein D	NA	NA	NA	NA
AWS87306.1\|61194_61875_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	8.7e-30	34.4
AWS87307.1\|61871_63272_+	sensor histidine kinase	W8CYF6	Bacillus_phage	4.1e-18	26.3
AWS87308.1\|63488_63923_+	copper-binding protein	NA	NA	NA	NA
AWS87423.1\|64154_64334_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AWS87309.1\|66076_66586_+	porin	NA	NA	NA	NA
AWS87310.1\|66635_67133_-	N-acetyltransferase	NA	NA	NA	NA
AWS87311.1\|67464_67791_+	transcriptional regulator	NA	NA	NA	NA
AWS87424.1\|67790_68501_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	2.9e-92	77.0
AWS87312.1\|68509_69055_+	RNA polymerase subunit sigma-70	NA	NA	NA	NA
AWS87313.1\|69130_69493_+	arsenical resistance operon transcriptional repressor ArsD	NA	NA	NA	NA
AWS87314.1\|71389_71926_+	N-acetyltransferase	NA	NA	NA	NA
AWS87315.1\|71958_72384_-	arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	2.3e-52	72.9
AWS87316.1\|72396_73686_-	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	1.9e-171	74.0
AWS87317.1\|73733_75485_-	arsenical pump-driving ATPase	NA	NA	NA	NA
AWS87318.1\|75502_75865_-	arsenical resistance operon transcriptional repressor ArsD	NA	NA	NA	NA
AWS87319.1\|75914_76265_-	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	1.4e-23	50.9
AWS87320.1\|76622_76892_+	hypothetical protein	NA	NA	NA	NA
AWS87321.1\|76879_77455_+	hypothetical protein	NA	NA	NA	NA
AWS87322.1\|77485_77980_+	DNA-binding protein	NA	NA	NA	NA
AWS87323.1\|78023_78392_+	hypothetical protein	NA	NA	NA	NA
AWS87324.1\|78425_78629_+	hemolysin expression modulator Hha	NA	NA	NA	NA
AWS87325.1\|78677_78935_+	hypothetical protein	NA	NA	NA	NA
AWS87326.1\|79010_79265_+	hypothetical protein	NA	NA	NA	NA
AWS87327.1\|79440_79707_+	DUF1778 domain-containing protein	NA	NA	NA	NA
AWS87328.1\|79694_80177_+	N-acetyltransferase	NA	NA	NA	NA
AWS87425.1\|80384_81731_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
AWS87329.1\|81779_82175_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AWS87330.1\|82363_83761_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
AWS87331.1\|84000_84279_-	hypothetical protein	NA	NA	NA	NA
AWS87332.1\|84613_85180_-	LuxR family transcriptional regulator	NA	NA	NA	NA
AWS87333.1\|85304_86948_-	alpha-D-glucose phosphate-specific phosphoglucomutase	A0A1X9I671	Streptococcus_phage	1.5e-22	25.0
AWS87334.1\|87061_89509_-	glycogen phosphorylase	A0A140XAG6	Dickeya_phage	6.1e-25	69.2
AWS87335.1\|89527_90961_-	glycogen synthase GlgA	NA	NA	NA	NA
AWS87336.1\|91049_92333_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
AWS87337.1\|92462_94655_-	1,4-alpha-glucan branching enzyme	NA	NA	NA	NA
AWS87338.1\|95072_95996_+\|transposase	IS5-like element IS903B family transposase	Q9MCT5	Escherichia_phage	1.1e-176	99.3

DBSCAN-SWA_2

101321 : 128783

Escherichia_phage(41.67%)

integrase,transposase

attL 108294:108353|attR 124602:125422

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS87340.1\|101321_103418_+\|transposase	transposase	NA	NA	NA	NA
AWS87341.1\|103698_104814_+	hypothetical protein	NA	NA	NA	NA
AWS87342.1\|105024_108033_-\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	62.8
108294:108353	attL	NA	NA	NA	NA
AWS87343.1\|108356_109061_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWS87344.1\|109213_110647_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
AWS87345.1\|110680_111889_-	restriction endonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
AWS87346.1\|111901_112114_-	resolvase	NA	NA	NA	NA
AWS87347.1\|112155_112920_-\|transposase	IS6 family transposase IS6100	A0A077SL39	Escherichia_phage	4.3e-86	65.7
AWS87348.1\|114291_115296_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
AWS87349.1\|115606_115984_+	N-acetyltransferase	NA	NA	NA	NA
AWS87350.1\|116184_116844_-	type A chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	7.1e-130	99.5
AWS87351.1\|116897_117089_+	hypothetical protein	NA	NA	NA	NA
AWS87352.1\|117467_117908_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	2.6e-19	60.3
AWS87353.1\|117904_118255_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	5.2e-39	63.8
AWS87354.1\|118285_119878_+\|transposase	IS66-like element ISKox1 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.2e-176	61.8
AWS87355.1\|120517_121774_-	EreA family erythromycin esterase	NA	NA	NA	NA
AWS87356.1\|122019_122472_-	NAD(+)--rifampin ADP-ribosyltransferase Arr-2	NA	NA	NA	NA
AWS87357.1\|122644_123658_+\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AWS87358.1\|123626_123860_+\|transposase	transposase	NA	NA	NA	NA
AWS87359.1\|123893_124598_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWS87427.1\|124978_125935_+	hypothetical protein	NA	NA	NA	NA
124602:125422	attR	NA	NA	NA	NA
AWS87360.1\|126119_126731_-	DUF2913 domain-containing protein	NA	NA	NA	NA
AWS87361.1\|126784_127066_-	cytoplasmic protein	NA	NA	NA	NA
AWS87362.1\|127238_127574_+	C2H2-type zinc finger protein	NA	NA	NA	NA
AWS87363.1\|127802_128783_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.8e-185	99.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP029722

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

235407 : 246295

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS82332.1\|235407_236028_-	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
AWS82333.1\|236020_237286_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.3
AWS82334.1\|237297_238200_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
AWS82335.1\|238237_238471_-	hypothetical protein	NA	NA	NA	NA
AWS82336.1\|238461_239223_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AWS82337.1\|239243_240104_-	inhibitor-resistant class A broad-spectrum beta-lactamase SHV-26	A0A077SL40	Escherichia_phage	1.7e-155	99.3
AWS82338.1\|240401_240662_+	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
AWS82339.1\|240748_241837_+	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
AWS82340.1\|241867_243133_-	MFS transporter	NA	NA	NA	NA
AWS82341.1\|243187_246295_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6

DBSCAN-SWA_2

687777 : 743150

Enterobacteria_phage(52.94%)

transposase,tRNA,capsid,terminase,plate,integrase,tail,portal

attL 693005:693022|attR 729431:729448

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS82740.1\|687777_688278_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
AWS82741.1\|688394_688841_+	DUF441 domain-containing protein	NA	NA	NA	NA
AWS86874.1\|688824_689616_-	AraC family transcriptional regulator	NA	NA	NA	NA
AWS82742.1\|689717_690902_+	cyanate MFS transporter	NA	NA	NA	NA
AWS82743.1\|690933_691626_-	hypothetical protein	NA	NA	NA	NA
AWS82744.1\|691771_692281_+	DUF523 domain-containing protein	NA	NA	NA	NA
AWS82745.1\|692267_692624_+	DUF488 domain-containing protein	NA	NA	NA	NA
AWS82746.1\|692613_692853_-	DUF333 domain-containing protein	NA	NA	NA	NA
693005:693022	attL	NA	NA	NA	NA
AWS86875.1\|693117_693369_-	hypothetical protein	A0A2I8TV89	Erwinia_phage	3.4e-08	49.2
AWS82747.1\|693412_694552_-	phage late control D family protein	B9A7A9	Serratia_phage	3.2e-146	71.3
AWS82748.1\|694706_695879_+\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	3.2e-157	70.2
AWS82749.1\|695878_696394_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	3.7e-57	61.2
AWS82750.1\|696439_696757_+\|tail	phage tail protein	B9A7B2	Serratia_phage	1.0e-17	54.8
AWS86876.1\|696756_696915_+\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	3.5e-11	63.3
AWS82751.1\|696901_699877_+\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	9.5e-222	46.8
AWS86877.1\|699891_700383_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	5.6e-55	62.7
AWS82752.1\|700698_702186_+	hypothetical protein	NA	NA	NA	NA
AWS82753.1\|702435_703533_-\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	1.3e-11	29.0
AWS82754.1\|703532_703745_-	hypothetical protein	NA	NA	NA	NA
AWS82755.1\|703741_706768_-\|tail	phage tail protein I	D5LGZ2	Escherichia_phage	1.9e-23	40.0
AWS82756.1\|706757_707681_-\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	2.2e-52	43.2
AWS82757.1\|707682_708033_-\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	6.2e-24	59.3
AWS82758.1\|708029_708617_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	5.9e-59	60.0
AWS82759.1\|708613_709249_-	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	2.3e-56	51.4
AWS82760.1\|709245_709713_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	2.7e-46	58.8
AWS86878.1\|709894_710224_-	DUF2570 domain-containing protein	NA	NA	NA	NA
AWS82761.1\|710235_710781_-	lysozyme	Q1I0Z1	Pasteurella_virus	6.3e-31	43.0
AWS82762.1\|710777_711062_-\|tail	phage tail protein	NA	NA	NA	NA
AWS82763.1\|711052_711253_-\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	1.6e-16	63.1
AWS82764.1\|711252_711768_-\|capsid	capsid assembly protein	A0A0A7NPU2	Enterobacteria_phage	4.1e-40	49.4
AWS82765.1\|711880_712738_-\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	9.8e-71	58.6
AWS82766.1\|712787_713822_-\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	6.2e-96	50.0
AWS82767.1\|713831_714671_-\|capsid	phage capsid protein	A0A0A7NRY7	Enterobacteria_phage	2.5e-95	66.7
AWS82768.1\|714827_716555_+	oxidoreductase	A0A0A7NV54	Enterobacteria_phage	1.5e-235	68.6
AWS82769.1\|716548_717610_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	4.5e-142	67.8
AWS82770.1\|717794_717980_+	hypothetical protein	NA	NA	NA	NA
AWS82771.1\|718209_719034_+	hypothetical protein	NA	NA	NA	NA
AWS82772.1\|719403_719763_-	hypothetical protein	NA	NA	NA	NA
AWS82773.1\|720012_721752_-	RNA-directed DNA polymerase	NA	NA	NA	NA
AWS82774.1\|724451_725468_-	hypothetical protein	B7SYG0	Stenotrophomonas_phage	1.5e-65	43.7
AWS86879.1\|725505_725733_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	1.9e-05	39.7
AWS82775.1\|725741_726308_-	3'-5' exoribonuclease	D4HTX2	Vibrio_phage	7.2e-14	33.2
AWS82776.1\|726304_726529_-	hypothetical protein	NA	NA	NA	NA
AWS82777.1\|726597_726870_-	hypothetical protein	NA	NA	NA	NA
AWS82778.1\|726885_727263_-	hypothetical protein	NA	NA	NA	NA
AWS82779.1\|727278_727497_-	DUF4761 domain-containing protein	A0A0M5M1I3	Salmonella_phage	3.6e-06	49.1
AWS82780.1\|727517_727796_-	hypothetical protein	Q1JS60	Enterobacteria_phage	6.2e-43	88.9
AWS82781.1\|727916_728216_+	XRE family transcriptional regulator	Q1JS61	Enterobacteria_phage	7.1e-37	75.8
AWS82782.1\|728331_729345_+\|integrase	integrase	Q83VS6	Escherichia_phage	2.2e-154	79.4
AWS82783.1\|729579_730593_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.4e-12	29.5
729431:729448	attR	NA	NA	NA	NA
AWS82784.1\|730650_730752_+	hypothetical protein	NA	NA	NA	NA
AWS86880.1\|730751_730826_+	hypothetical protein	NA	NA	NA	NA
AWS82785.1\|730943_731069_+	hypothetical protein	NA	NA	NA	NA
AWS82786.1\|731128_731392_-	DUF2534 domain-containing protein	NA	NA	NA	NA
AWS82787.1\|731522_732161_-	leucine efflux protein	NA	NA	NA	NA
AWS82788.1\|732250_733165_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
AWS82789.1\|733380_733572_+	hypothetical protein	NA	NA	NA	NA
AWS82790.1\|733825_734869_-	type II asparaginase	NA	NA	NA	NA
AWS82791.1\|735171_736380_+	phosphodiesterase	NA	NA	NA	NA
AWS82792.1\|736453_738238_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
AWS82793.1\|738244_739135_-	LysR family transcriptional regulator	NA	NA	NA	NA
AWS82794.1\|739255_740764_+	3,4-dihydroxybenzoate decarboxylase	NA	NA	NA	NA
AWS82795.1\|741074_741761_-	diguanylate phosphodiesterase	NA	NA	NA	NA
AWS82796.1\|742226_743150_-\|transposase	IS5-like element IS903B family transposase	Q9MCT5	Escherichia_phage	1.1e-176	99.3

DBSCAN-SWA_3

994350 : 1003813

Bacillus_phage(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS83022.1\|994350_996072_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	1.2e-14	22.6
AWS83023.1\|996116_996818_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AWS83024.1\|997171_997390_+	translation initiation factor IF-1	NA	NA	NA	NA
AWS83025.1\|997509_999789_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
AWS83026.1\|999819_1000137_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
AWS83027.1\|1000462_1000684_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AWS83028.1\|1000617_1000821_-	hypothetical protein	NA	NA	NA	NA
AWS83029.1\|1000760_1002701_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
AWS83030.1\|1002697_1003813_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

DBSCAN-SWA_4

1453273 : 1528269

Enterobacteria_phage(20.0%)

transposase,holin,tRNA,capsid,terminase,plate,integrase,tail,portal,head

attL 1475014:1475060|attR 1520641:1520687

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS83424.1\|1453273_1454791_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	9.5e-85	36.3
AWS83425.1\|1455122_1456598_-	MFS transporter	A0A0P0IY73	Acinetobacter_phage	6.9e-48	29.0
AWS83426.1\|1456657_1458805_-	lysine decarboxylase CadA	NA	NA	NA	NA
AWS83427.1\|1458887_1460222_-	lysine:cadaverine antiporter	NA	NA	NA	NA
AWS83428.1\|1460587_1462156_-	transcriptional regulator CadC	NA	NA	NA	NA
AWS83429.1\|1462448_1462721_-	DUF1471 domain-containing protein	NA	NA	NA	NA
AWS83430.1\|1462821_1463742_-	lipid A biosynthesis lauroyl acyltransferase	A0A1W6JP29	Morganella_phage	5.4e-51	40.1
AWS83431.1\|1464252_1465119_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AWS83432.1\|1465141_1466167_-	type 1 fimbrial protein	NA	NA	NA	NA
AWS83433.1\|1466168_1468604_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
AWS83434.1\|1468614_1469310_-	molecular chaperone	NA	NA	NA	NA
AWS83435.1\|1469368_1469929_-	type 1 fimbrial protein	NA	NA	NA	NA
AWS83436.1\|1470400_1471063_+	LuxR family transcriptional regulator	NA	NA	NA	NA
AWS83437.1\|1471040_1471346_+	hypothetical protein	NA	NA	NA	NA
AWS83438.1\|1471398_1472703_-	citrate synthase	NA	NA	NA	NA
AWS83439.1\|1473213_1473384_+	ATP-NAD kinase	NA	NA	NA	NA
AWS83440.1\|1473462_1473864_-	hydroxyisourate hydrolase	NA	NA	NA	NA
AWS83441.1\|1474259_1474553_-	hypothetical protein	NA	NA	NA	NA
1475014:1475060	attL	NA	NA	NA	NA
AWS83442.1\|1475215_1475422_-	hypothetical protein	K7PGV5	Enterobacterial_phage	1.6e-08	47.7
AWS83443.1\|1476764_1477610_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
AWS86917.1\|1479680_1480331_+	hypothetical protein	NA	NA	NA	NA
AWS86918.1\|1480748_1481063_-\|tail	tail fiber assembly protein	A0A218M4J2	Erwinia_phage	4.4e-13	48.4
AWS83444.1\|1481746_1482778_-\|transposase	IS630-like element ISEc33 family transposase	NA	NA	NA	NA
AWS83445.1\|1483093_1483690_-	DUF2313 domain-containing protein	A0A2P9JZK7	Alteromonadaceae_phage	3.6e-32	36.4
AWS83446.1\|1483686_1484835_-\|plate	phage baseplate protein	B6SBU6	Clostridium_virus	1.7e-09	26.1
AWS83447.1\|1484824_1485274_-	hypothetical protein	A0A0C4UR04	Shigella_phage	2.3e-15	39.7
AWS83448.1\|1485270_1485852_-\|plate	baseplate assembly protein	NA	NA	NA	NA
AWS83449.1\|1485848_1486934_-\|tail	phage tail protein	Q8SBG7	Shigella_phage	1.5e-39	30.6
AWS83450.1\|1486930_1488331_-	hypothetical protein	A0A2P9JZK2	Alteromonadaceae_phage	4.0e-05	39.1
AWS83451.1\|1488377_1490231_-	hypothetical protein	A0A172JGI1	Citrobacter_phage	1.8e-21	45.3
AWS83452.1\|1490372_1490651_-\|tail	phage tail assembly protein	NA	NA	NA	NA
AWS83453.1\|1490652_1491024_-\|tail	phage tail protein	NA	NA	NA	NA
AWS83454.1\|1491027_1492539_-\|tail	phage tail protein	B5TK67	Pseudomonas_phage	1.2e-103	44.4
AWS83455.1\|1492543_1492720_-	DUF2635 domain-containing protein	NA	NA	NA	NA
AWS83456.1\|1492722_1493268_-	ATP-binding protein	NA	NA	NA	NA
AWS83457.1\|1493264_1493624_-	hypothetical protein	NA	NA	NA	NA
AWS83458.1\|1493628_1494009_-	hypothetical protein	NA	NA	NA	NA
AWS83459.1\|1494010_1495060_-\|capsid	major capsid protein	V5Q8G6	Xylella_phage	8.1e-51	33.7
AWS83460.1\|1495158_1495566_-\|head	head decoration protein	NA	NA	NA	NA
AWS83461.1\|1495565_1496156_-	hypothetical protein	NA	NA	NA	NA
AWS83462.1\|1496157_1497024_-	S49 family peptidase	A0A248XD65	Klebsiella_phage	1.1e-48	48.1
AWS83463.1\|1497020_1498655_-\|portal	phage portal protein	A0A291AUL8	Sinorhizobium_phage	1.4e-89	35.5
AWS83464.1\|1498654_1498918_-\|head,tail	phage head-tail adapter protein	NA	NA	NA	NA
AWS83465.1\|1498926_1501053_-\|terminase	terminase	A0A0C5ABH4	Bacteriophage	6.1e-98	34.5
AWS83466.1\|1500994_1501576_-	hypothetical protein	NA	NA	NA	NA
AWS83467.1\|1501837_1502476_-	hypothetical protein	NA	NA	NA	NA
AWS83468.1\|1502571_1502778_-	hypothetical protein	NA	NA	NA	NA
AWS83469.1\|1503011_1503401_-	DUF2570 domain-containing protein	A0A192Y6H8	Salmonella_phage	1.1e-24	50.0
AWS86919.1\|1503397_1503895_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	2.5e-79	84.2
AWS83470.1\|1503872_1504142_-\|holin	holin	K7P6H9	Enterobacteria_phage	7.4e-33	77.2
AWS83471.1\|1504685_1505369_-	antiterminator	I6PDF8	Cronobacter_phage	3.4e-58	52.8
AWS83472.1\|1505365_1505506_-	YlcG family protein	NA	NA	NA	NA
AWS83473.1\|1505502_1506141_-	hypothetical protein	H6WRY9	Salmonella_phage	9.2e-74	68.4
AWS83474.1\|1506133_1506802_-	serine/threonine protein phosphatase	K7P6H8	Enterobacteria_phage	2.5e-106	80.1
AWS83475.1\|1506798_1506966_-	NinE family protein	K7P7K0	Enterobacteria_phage	3.5e-09	62.5
AWS83476.1\|1506946_1507414_-	recombination protein NinB	Q8VNP6	Enterobacteria_phage	3.4e-33	46.5
AWS83477.1\|1507695_1507917_-	hypothetical protein	NA	NA	NA	NA
AWS83478.1\|1508097_1508946_-	DUF551 domain-containing protein	A0A248SKW5	Klebsiella_phage	2.7e-49	93.4
AWS83479.1\|1508942_1509323_-	HNH endonuclease	K7P7B7	Enterobacteria_phage	1.6e-62	94.2
AWS83480.1\|1509322_1510156_-	hypothetical protein	A0A075B8K3	Enterobacteria_phage	1.1e-26	43.9
AWS83481.1\|1510152_1510359_-	hypothetical protein	R9TRD3	Aeromonas_phage	1.1e-31	97.1
AWS83482.1\|1510355_1510757_-	hypothetical protein	R9TME7	Aeromonas_phage	6.7e-06	31.9
AWS83483.1\|1510753_1511056_-	MarR family transcriptional regulator	NA	NA	NA	NA
AWS83484.1\|1511052_1511901_-	ATP-binding protein	K7PLU3	Enterobacteria_phage	1.2e-89	60.8
AWS83485.1\|1513064_1513385_-	hypothetical protein	A0A0M4RU01	Salmonella_phage	6.5e-36	67.9
AWS83486.1\|1513434_1513650_-	XRE family transcriptional regulator	Q716D6	Shigella_phage	5.5e-15	60.9
AWS83487.1\|1513749_1514382_+	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	2.0e-33	39.5
AWS83488.1\|1514818_1515025_+	cell division inhibitor protein	A0A0M4S6W3	Salmonella_phage	1.4e-31	94.1
AWS83489.1\|1515106_1515391_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	9.5e-39	78.7
AWS83490.1\|1515407_1516154_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	7.0e-65	67.2
AWS83491.1\|1516150_1516774_+	exonuclease	A0A0S2SY31	Pseudomonas_phage	3.1e-58	60.2
AWS83492.1\|1516802_1517330_+	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	1.1e-56	61.6
AWS83493.1\|1517543_1517888_+	hypothetical protein	NA	NA	NA	NA
AWS83494.1\|1517880_1518558_+	morphogenetic protein	H2BDG4	Pseudomonas_virus	1.7e-49	47.4
AWS83495.1\|1518554_1518782_+	hypothetical protein	S4TRP7	Salmonella_phage	1.8e-08	43.2
AWS83496.1\|1518778_1519000_+	conjugal transfer protein TraR	A0A0K2FI84	Escherichia_phage	2.0e-12	52.2
AWS83497.1\|1518999_1519239_+	DUF4222 domain-containing protein	Q6H9Z8	Enterobacteria_phage	7.8e-10	43.6
AWS86920.1\|1519251_1519587_+	DNA-binding protein	NA	NA	NA	NA
AWS86921.1\|1519583_1520627_+\|integrase	site-specific integrase	G8C7S0	Escherichia_phage	5.0e-178	85.6
AWS83498.1\|1521057_1521924_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
1520641:1520687	attR	NA	NA	NA	NA
AWS83499.1\|1521925_1522138_+	hypothetical protein	NA	NA	NA	NA
AWS83500.1\|1522183_1523569_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4
AWS83501.1\|1523744_1524239_+	peptidylprolyl isomerase	NA	NA	NA	NA
AWS83502.1\|1524242_1524965_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
AWS83503.1\|1525072_1525411_+	hypothetical protein	NA	NA	NA	NA
AWS83504.1\|1525407_1525575_-	MarR family transcriptional regulator	NA	NA	NA	NA
AWS83505.1\|1525507_1526017_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
AWS83506.1\|1526013_1527081_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
AWS83507.1\|1527192_1528269_+\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA

DBSCAN-SWA_5

1532768 : 1597909

Escherichia_phage(28.57%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS86923.1\|1532768_1533395_+\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
AWS83510.1\|1533423_1534194_+	oxidoreductase	NA	NA	NA	NA
AWS83511.1\|1534252_1535107_+	co-chaperone YbbN	NA	NA	NA	NA
AWS83512.1\|1535214_1535997_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
AWS83513.1\|1535983_1536661_-	iron ABC transporter ATP-binding protein FetA	G3M9Y6	Bacillus_virus	1.3e-22	33.0
AWS83514.1\|1536801_1537719_+	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
AWS83515.1\|1537715_1538174_+	NfeD family protein	NA	NA	NA	NA
AWS83516.1\|1538170_1538581_-	HTH-type transcriptional regulator CueR	NA	NA	NA	NA
AWS86924.1\|1538687_1541189_+	copper-exporting P-type ATPase CopA	A0A218MNH6	uncultured_virus	4.7e-113	38.0
AWS83517.1\|1541320_1542115_+	conjugal transfer protein TraB	NA	NA	NA	NA
AWS83518.1\|1542317_1542797_+\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
AWS83519.1\|1542902_1544555_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA
AWS83520.1\|1544824_1546045_+	MFS transporter	NA	NA	NA	NA
AWS83521.1\|1546270_1547947_+	Kef family K(+) transporter	NA	NA	NA	NA
AWS83522.1\|1547982_1549287_-	inosine/guanosine kinase	NA	NA	NA	NA
AWS83523.1\|1549350_1550313_-	ferrochelatase	NA	NA	NA	NA
AWS83524.1\|1550441_1551086_-	adenylate kinase	NA	NA	NA	NA
AWS83525.1\|1551308_1553183_-	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	4.9e-115	36.8
AWS83526.1\|1553294_1553900_-	recombination protein RecR	NA	NA	NA	NA
AWS83527.1\|1553899_1554232_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
AWS83528.1\|1554289_1556197_-	DNA polymerase III subunit gamma/tau	A0A1L2BWV7	Bacteriophage	3.0e-43	38.2
AWS83529.1\|1556289_1556841_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	3.9e-28	44.5
AWS83530.1\|1556991_1557369_-	DUF454 domain-containing protein	NA	NA	NA	NA
AWS83531.1\|1557438_1557966_+	primosomal replication protein N''	NA	NA	NA	NA
AWS83532.1\|1557978_1558152_+	DUF2496 domain-containing protein	NA	NA	NA	NA
AWS83533.1\|1558219_1559119_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	1.6e-63	51.2
AWS83534.1\|1559154_1562502_-	mechanosensitive channel MscK	NA	NA	NA	NA
AWS83535.1\|1562631_1563282_-	DNA-binding transcriptional repressor AcrR	NA	NA	NA	NA
AWS83536.1\|1563424_1564618_+	MexE family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AWS83537.1\|1564640_1567787_+	multidrug efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	1.1e-47	22.7
AWS83538.1\|1568272_1568647_+	Hha toxicity attenuator	NA	NA	NA	NA
AWS83539.1\|1568673_1568892_+	transcriptional regulator	NA	NA	NA	NA
AWS83540.1\|1569050_1569617_+	maltose O-acetyltransferase	NA	NA	NA	NA
AWS83541.1\|1569749_1570220_+	hypothetical protein	NA	NA	NA	NA
AWS83542.1\|1570194_1571646_-	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	4.6e-12	25.1
AWS83543.1\|1571746_1572445_+	N-acetyltransferase	NA	NA	NA	NA
AWS83544.1\|1572441_1572582_-	50S ribosomal protein L36	NA	NA	NA	NA
AWS83545.1\|1572581_1572845_-	type B 50S ribosomal protein L31	NA	NA	NA	NA
AWS83546.1\|1572960_1574031_-	lac repressor	C6ZCU4	Enterobacteria_phage	6.1e-70	42.8
AWS83547.1\|1574301_1575573_+	maltoporin	NA	NA	NA	NA
AWS83548.1\|1575709_1576024_-	PTS sugar transporter	NA	NA	NA	NA
AWS83549.1\|1576088_1578146_-	beta-galactosidase	NA	NA	NA	NA
AWS83550.1\|1578177_1579380_-	galactosidase	NA	NA	NA	NA
AWS83551.1\|1579384_1580236_-	sugar ABC transporter permease	NA	NA	NA	NA
AWS83552.1\|1580246_1581554_-	sugar ABC transporter permease	NA	NA	NA	NA
AWS83553.1\|1581616_1582849_-	cyclodextrin-binding protein	NA	NA	NA	NA
AWS83554.1\|1583205_1584315_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	2.5e-26	35.0
AWS83555.1\|1584548_1586108_+	EAL domain-containing protein	NA	NA	NA	NA
AWS86925.1\|1586142_1586415_-	metal/formaldehyde-sensitive transcriptional repressor	NA	NA	NA	NA
AWS83556.1\|1586579_1587443_+	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA
AWS83557.1\|1587487_1588084_-	hypothetical protein	NA	NA	NA	NA
AWS83558.1\|1588127_1589051_-\|transposase	IS5-like element IS903B family transposase	Q9MCT5	Escherichia_phage	1.1e-176	99.3
AWS83559.1\|1589390_1590416_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AWS83560.1\|1592044_1592260_-	hypothetical protein	NA	NA	NA	NA
AWS83561.1\|1592256_1592514_-	hypothetical protein	NA	NA	NA	NA
AWS83562.1\|1593422_1594448_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AWS83563.1\|1594787_1595711_+\|transposase	IS5-like element IS903B family transposase	Q9MCT5	Escherichia_phage	1.1e-176	99.3
AWS83564.1\|1596012_1596936_+\|transposase	IS5/IS1182 family transposase	Q9MCT5	Escherichia_phage	9.2e-176	99.0
AWS83565.1\|1596979_1597909_+\|transposase	IS5/IS1182 family transposase	Q9MCT5	Escherichia_phage	3.5e-175	98.7

DBSCAN-SWA_6

3759473 : 3799232

Bacillus_phage(22.22%)

transposase,integrase,tRNA

attL 3773134:3773148|attR 3796967:3796981

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS85541.1\|3759473_3760283_+\|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	S4VW33	Pandoravirus	9.4e-15	31.7
AWS85542.1\|3760413_3760851_-	cysteine desulfurase sulfur acceptor subunit CsdE	NA	NA	NA	NA
AWS85543.1\|3760850_3762056_-	cysteine desulfurase CsdA	Q2XUY6	environmental_halophage	8.9e-70	36.8
AWS87005.1\|3762253_3762478_+	YgdI/YgdR family lipoprotein	NA	NA	NA	NA
AWS85544.1\|3762829_3763747_+	transcriptional regulator GcvA	NA	NA	NA	NA
AWS85545.1\|3763766_3764162_+	hypothetical protein	NA	NA	NA	NA
AWS85546.1\|3764154_3765255_+	23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM	NA	NA	NA	NA
AWS85547.1\|3765309_3766020_-	L-fucose operon activator	NA	NA	NA	NA
AWS85548.1\|3766078_3766501_-	L-fucose mutarotase	NA	NA	NA	NA
AWS85549.1\|3766502_3767921_-	L-fuculokinase	NA	NA	NA	NA
AWS85550.1\|3768028_3769804_-	L-fucose isomerase	NA	NA	NA	NA
AWS85551.1\|3769836_3771147_-	L-fucose:H+ symporter permease	NA	NA	NA	NA
AWS85552.1\|3771713_3772361_+	L-fuculose-phosphate aldolase	NA	NA	NA	NA
AWS85553.1\|3772388_3773537_+	lactaldehyde reductase	NA	NA	NA	NA
3773134:3773148	attL	NA	NA	NA	NA
AWS85554.1\|3773584_3774340_-	flap endonuclease Xni	F8WQ40	Bacillus_phage	1.3e-10	33.6
AWS85555.1\|3774436_3776380_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
AWS85556.1\|3776652_3777825_+	alkanesulfonate monooxygenase, FMNH(2)-dependent	NA	NA	NA	NA
AWS85557.1\|3777871_3779269_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AWS85558.1\|3779342_3780749_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
AWS85559.1\|3780745_3781768_+	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.9e-25	36.1
AWS85560.1\|3781764_3782463_+	ABC transporter permease	NA	NA	NA	NA
AWS85561.1\|3782459_3783338_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AWS85562.1\|3784043_3785306_+\|transposase	IS1380 family transposase ISEc9	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
AWS85563.1\|3785561_3786437_+	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
AWS85564.1\|3786483_3786858_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
AWS85565.1\|3786864_3788235_-\|transposase	IS1182 family transposase ISCfr1	NA	NA	NA	NA
AWS85566.1\|3788349_3789486_-	DUF3883 domain-containing protein	NA	NA	NA	NA
AWS85567.1\|3789536_3789782_-	hypothetical protein	NA	NA	NA	NA
AWS85568.1\|3789787_3789979_+	hypothetical protein	NA	NA	NA	NA
AWS85569.1\|3790460_3791003_-	tunicamycin resistance protein	NA	NA	NA	NA
AWS85570.1\|3791015_3791876_-	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA
AWS85571.1\|3792108_3792813_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWS85572.1\|3792846_3793149_-\|transposase	transposase	NA	NA	NA	NA
AWS85573.1\|3793087_3794101_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AWS85574.1\|3794245_3794743_+	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
AWS85575.1\|3794854_3795145_+	hypothetical protein	NA	NA	NA	NA
AWS85576.1\|3795150_3795942_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
AWS85577.1\|3796105_3796453_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AWS85578.1\|3796446_3797286_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
3796967:3796981	attR	NA	NA	NA	NA
AWS85579.1\|3797690_3799232_+\|transposase	IS91 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

4499571 : 4506476

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS87031.1\|4499571_4500435_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
AWS86185.1\|4500445_4501219_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.0e-26	37.2
AWS87032.1\|4501460_4502354_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
AWS86186.1\|4502598_4503960_-	U32 family peptidase	Q6DW11	Phage_TP	3.9e-207	94.5
AWS86187.1\|4504278_4505001_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
AWS86188.1\|4504997_4506476_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	1.4e-29	28.3

DBSCAN-SWA_8

4516940 : 4562870

Escherichia_phage(30.77%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS86194.1\|4516940_4517966_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AWS86195.1\|4518284_4519208_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AWS86196.1\|4519547_4520573_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AWS86197.1\|4520569_4520779_-	hypothetical protein	NA	NA	NA	NA
AWS86198.1\|4520990_4521602_-	transcriptional regulator	NA	NA	NA	NA
AWS86199.1\|4522041_4523022_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	5.2e-185	98.8
AWS86200.1\|4523294_4523996_-	DNA-binding response regulator	NA	NA	NA	NA
AWS86201.1\|4524010_4525867_-	histidine kinase	NA	NA	NA	NA
AWS86202.1\|4526155_4527508_-	molecular chaperone	NA	NA	NA	NA
AWS86203.1\|4527524_4527635_+	DNA-3-methyladenine glycosidase	NA	NA	NA	NA
AWS86204.1\|4527645_4528494_+	DNA-3-methyladenine glycosylase 2	NA	NA	NA	NA
AWS86205.1\|4528608_4529250_+	uridine kinase	A0A1V0SAA3	Catovirus	2.0e-36	39.3
AWS86206.1\|4529340_4529922_+	dCTP deaminase	I4AZP2	Saccharomonospora_phage	5.1e-31	41.6
AWS86207.1\|4529952_4531800_+	outer membrane assembly protein AsmA	NA	NA	NA	NA
AWS86208.1\|4532031_4533615_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	5.0e-36	43.5
AWS87033.1\|4534380_4535271_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	3.3e-45	42.6
AWS86209.1\|4535662_4536292_+	phosphatase PAP2 family protein	NA	NA	NA	NA
AWS86210.1\|4537251_4538691_+	capsule assembly Wzi family protein	NA	NA	NA	NA
AWS86211.1\|4538836_4539970_+	polysaccharide export protein Wza	NA	NA	NA	NA
AWS87034.1\|4539975_4540410_+	protein tyrosine phosphatase	NA	NA	NA	NA
AWS86212.1\|4540426_4542589_+	tyrosine-protein kinase	NA	NA	NA	NA
AWS86213.1\|4542661_4544092_+	undecaprenyl-phosphate galactose phosphotransferase WbaP	NA	NA	NA	NA
AWS86214.1\|4544115_4545579_+	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA
AWS86215.1\|4545571_4546702_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
AWS86216.1\|4546710_4547805_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
AWS86217.1\|4548349_4548661_-	hypothetical protein	NA	NA	NA	NA
AWS86218.1\|4549445_4550369_+\|transposase	IS5-like element IS903B family transposase	Q9MCT5	Escherichia_phage	1.1e-176	99.3
AWS86219.1\|4551935_4552358_+	hypothetical protein	NA	NA	NA	NA
AWS86220.1\|4552471_4553623_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
AWS86221.1\|4553806_4554730_+\|transposase	IS5-like element IS903B family transposase	Q9MCT5	Escherichia_phage	1.1e-176	99.3
AWS86222.1\|4554834_4556241_+	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	M4QQM4	Ostreococcus_lucimarinus_virus	3.6e-38	28.7
AWS86223.1\|4556428_4557352_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.7e-175	98.7
AWS86224.1\|4557532_4558948_+	mannose-1-phosphate guanylyltransferase	A0A1V0SH58	Hokovirus	1.4e-53	31.0
AWS86225.1\|4558969_4560340_+	phosphomannomutase	A0A127AWJ1	Bacillus_phage	1.1e-31	25.9
AWS86226.1\|4560503_4561670_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	9.1e-112	54.7
AWS86227.1\|4561862_4562870_+	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	4.4e-30	28.0

DBSCAN-SWA_9

4667664 : 4677211

Burkholderia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS86311.1\|4667664_4668588_+\|transposase	IS5-like element IS903B family transposase	Q9MCT5	Escherichia_phage	1.1e-176	99.3
AWS86312.1\|4668767_4669913_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	1.1e-117	58.7
AWS86313.1\|4670451_4670733_+	hypothetical protein	NA	NA	NA	NA
AWS86314.1\|4670775_4671483_+	phosphohydrolase	S4W232	Pandoravirus	2.8e-07	27.7
AWS86315.1\|4671526_4672960_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	4.0e-101	53.0
AWS87042.1\|4672940_4673435_+	very short patch repair endonuclease	E5E3X5	Burkholderia_phage	5.7e-31	50.7
AWS86316.1\|4673409_4674321_-	drug/metabolite exporter YedA	NA	NA	NA	NA
AWS86317.1\|4674504_4675416_+	DUF808 domain-containing protein	NA	NA	NA	NA
AWS86318.1\|4675531_4677211_+	cellulose biosynthesis regulator YedQ	A0A127AWB9	Bacillus_phage	6.9e-20	41.1

DBSCAN-SWA_10

4836419 : 4847706

Klebsiella_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS86470.1\|4836419_4837715_+	MFS transporter	Q6JIH2	Burkholderia_virus	9.6e-62	36.8
AWS86471.1\|4837729_4838536_+	molybdenum ABC transporter substrate-binding protein	NA	NA	NA	NA
AWS86472.1\|4838776_4840039_-	DUF3596 domain-containing protein	A0A286S1S8	Klebsiella_phage	1.5e-232	94.8
AWS86473.1\|4840081_4840327_-	excisionase	A0A286S2A4	Klebsiella_phage	3.8e-36	93.4
AWS86474.1\|4840544_4841294_-	hypothetical protein	A0A077KCB2	Edwardsiella_phage	2.3e-84	60.3
AWS86475.1\|4841290_4841515_-	hypothetical protein	A0A286S2B3	Klebsiella_phage	1.5e-18	60.8
AWS86476.1\|4841511_4841739_-	hypothetical protein	A0A291LBA3	Klebsiella_phage	2.1e-09	48.4
AWS86477.1\|4842038_4842332_-	host cell division inhibitory peptide Kil	NA	NA	NA	NA
AWS86478.1\|4842525_4842714_-	hypothetical protein	NA	NA	NA	NA
AWS86479.1\|4843485_4844082_-	XRE family transcriptional regulator	K7P850	Enterobacteria_phage	4.1e-07	27.1
AWS86480.1\|4844190_4844403_+	transcriptional regulator	NA	NA	NA	NA
AWS86481.1\|4844423_4844744_+	hypothetical protein	A0A0M4RU01	Salmonella_phage	5.0e-36	68.9
AWS86482.1\|4844939_4845194_+	hypothetical protein	NA	NA	NA	NA
AWS86483.1\|4845190_4846285_+	hypothetical protein	K7PLZ7	Enterobacterial_phage	9.7e-31	40.3
AWS86484.1\|4846311_4846707_+	hypothetical protein	NA	NA	NA	NA
AWS86485.1\|4846706_4846928_+	hypothetical protein	NA	NA	NA	NA
AWS86486.1\|4846920_4847706_+	hypothetical protein	C7BGF1	Burkholderia_phage	1.5e-62	52.1

DBSCAN-SWA_11

4851968 : 4909557

Vibrio_phage(33.33%)

transposase,holin,capsid,terminase,plate,protease,tail,portal,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS86491.1\|4851968_4852562_+	hypothetical protein	A0A0M4RU10	Salmonella_phage	1.2e-40	63.2
AWS86492.1\|4852558_4853329_+	dcm methylase	D5LH17	Escherichia_phage	3.0e-63	51.2
AWS86493.1\|4853325_4853970_+	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	1.2e-102	80.5
AWS86494.1\|4853966_4854566_+	hypothetical protein	H9C175	Pectobacterium_phage	1.1e-65	58.9
AWS86495.1\|4855203_4855473_+\|holin	holin	K7P6H9	Enterobacteria_phage	8.1e-32	77.2
AWS87052.1\|4855450_4855951_+	lysozyme	A0A1V0E5Q7	Salmonella_phage	5.9e-76	84.4
AWS86496.1\|4855947_4856439_+	Fis family transcriptional regulator	Q2NPG0	Xanthomonas_virus	7.4e-31	43.9
AWS86497.1\|4856540_4856891_+	hypothetical protein	H2EQH5	Salmonella_phage	5.5e-12	39.7
AWS86498.1\|4857301_4857535_+	hypothetical protein	NA	NA	NA	NA
AWS86499.1\|4857522_4857873_+	HNH endonuclease	K7PHK9	Enterobacteria_phage	4.6e-51	78.4
AWS86500.1\|4858002_4858497_+\|terminase	phage terminase small subunit P27 family	Q8HAD7	Salmonella_phage	1.2e-81	92.0
AWS86501.1\|4858493_4860224_+\|terminase	terminase large subunit	Q8HAD6	Salmonella_phage	2.3e-300	83.0
AWS86502.1\|4860233_4860419_+	hypothetical protein	A0A1B5FP99	Escherichia_phage	5.2e-14	63.9
AWS86503.1\|4860418_4861648_+\|portal	phage portal protein	U5P411	Shigella_phage	1.3e-201	81.7
AWS86504.1\|4861634_4862288_+\|head,protease	HK97 family phage prohead protease	Q8W628	Enterobacteria_phage	9.3e-106	87.9
AWS86505.1\|4862302_4863511_+\|capsid	phage major capsid protein	A0A192Y5T6	Salmonella_phage	2.2e-193	84.2
AWS86506.1\|4863537_4863753_+	hypothetical protein	M1FN89	Enterobacteria_phage	7.2e-07	42.4
AWS86507.1\|4863749_4864070_+\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	1.7e-15	39.8
AWS86508.1\|4864139_4864337_+	hypothetical protein	A0A286S2A5	Klebsiella_phage	2.4e-25	96.9
AWS86509.1\|4864338_4864671_+\|head,tail	head-tail adaptor protein	A0A286S2A2	Klebsiella_phage	2.9e-55	98.2
AWS86510.1\|4864663_4865203_+	hypothetical protein	A0A286S249	Klebsiella_phage	3.7e-92	95.5
AWS86511.1\|4865199_4865565_+	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	5.4e-63	95.0
AWS86512.1\|4865621_4866113_+\|tail	phage tail protein	A0A286S1Q8	Klebsiella_phage	2.3e-88	100.0
AWS86513.1\|4866156_4866510_+\|tail	phage tail protein	A0A286S1N4	Klebsiella_phage	4.9e-61	99.1
AWS86514.1\|4866542_4866806_+\|tail	phage tail protein	A0A286S1P2	Klebsiella_phage	1.0e-42	96.6
AWS86515.1\|4866870_4867338_+	hypothetical protein	NA	NA	NA	NA
AWS86516.1\|4867382_4869827_+\|tail	phage tail tape measure protein	A0A286S1S3	Klebsiella_phage	1.1e-252	61.3
AWS86517.1\|4869826_4870297_+	hypothetical protein	A0A286S298	Klebsiella_phage	8.3e-64	67.7
AWS86518.1\|4870293_4870776_+	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	2.1e-78	90.6
AWS86519.1\|4870786_4871167_+	nitrite transporter	A0A286S2A6	Klebsiella_phage	6.9e-69	94.4
AWS86520.1\|4871530_4872094_-	transcriptional regulator	NA	NA	NA	NA
AWS87053.1\|4872275_4872500_+	transcriptional regulator	M1PVU4	Vibrio_phage	1.5e-15	57.1
AWS86521.1\|4874632_4875580_+	DNA transposition protein	A0A0C4UQR3	Shigella_phage	2.9e-140	79.4
AWS86522.1\|4875584_4875824_+	hypothetical protein	NA	NA	NA	NA
AWS86523.1\|4875826_4876114_+	HTH domain-containing protein	C9DGL7	Escherichia_phage	3.5e-17	48.3
AWS86524.1\|4876723_4877647_+\|transposase	IS5-like element IS903B family transposase	Q9MCT5	Escherichia_phage	1.1e-176	99.3
AWS86525.1\|4877893_4878391_+	hypothetical protein	A0A0A7RUP4	Clostridium_phage	1.9e-05	36.0
AWS86526.1\|4878350_4878827_+	hypothetical protein	K7PHA5	Enterobacterial_phage	3.3e-12	37.2
AWS86527.1\|4878823_4879378_+	regulatory protein GemA	A0A0C4UQU3	Shigella_phage	2.4e-38	46.7
AWS86528.1\|4879374_4879764_+	transcriptional regulator	A0A0C4UR27	Shigella_phage	4.6e-36	58.1
AWS86529.1\|4880040_4881057_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	9.8e-187	99.7
AWS87054.1\|4881094_4881220_-	sugar kinase	Q6QLL3	Human_immunodeficiency_virus	1.3e-13	100.0
AWS86530.1\|4881552_4882131_+	peptidoglycan-binding protein	A0A2I7S9B9	Vibrio_phage	5.1e-39	46.0
AWS86531.1\|4882133_4882352_+	hypothetical protein	A0A0C4UQR6	Shigella_phage	1.7e-24	70.8
AWS86532.1\|4882344_4882752_+	hypothetical protein	NA	NA	NA	NA
AWS86533.1\|4882739_4883345_+	hypothetical protein	M4MB79	Vibrio_phage	1.2e-22	39.8
AWS86534.1\|4883341_4883572_+	conjugal transfer protein TraR	NA	NA	NA	NA
AWS86535.1\|4883552_4883855_+	DUF2730 domain-containing protein	M1Q558	Vibrio_phage	4.3e-13	42.6
AWS86536.1\|4883864_4884152_+	hypothetical protein	A0A2I7S9D8	Vibrio_phage	8.4e-27	64.5
AWS86537.1\|4884154_4884430_+	hypothetical protein	NA	NA	NA	NA
AWS86538.1\|4884419_4884998_+	DUF3486 domain-containing protein	M4MCR3	Vibrio_phage	1.8e-52	59.2
AWS86539.1\|4884994_4886584_+	hypothetical protein	M4MHG0	Vibrio_phage	2.7e-199	68.5
AWS86540.1\|4886583_4888155_+	DUF935 domain-containing protein	A0A2I7S9K0	Vibrio_phage	4.6e-159	56.2
AWS86541.1\|4888147_4888990_+	hypothetical protein	M1PVV7	Vibrio_phage	1.7e-88	56.9
AWS86542.1\|4889178_4890195_+	peptidase	M1Q578	Vibrio_phage	3.9e-74	49.1
AWS86543.1\|4890197_4891097_+\|head	phage head protein	M4MB71	Vibrio_phage	1.5e-101	59.4
AWS86544.1\|4891173_4891680_+	hypothetical protein	NA	NA	NA	NA
AWS86545.1\|4891679_4892120_+	DUF1320 domain-containing protein	A0A2I7S9E9	Vibrio_phage	4.9e-34	47.9
AWS86546.1\|4892119_4892662_+	phage morphogenesis protein	A0A2I7S9D7	Vibrio_phage	2.9e-60	64.2
AWS86547.1\|4892658_4893270_+	hypothetical protein	M1PJ94	Vibrio_phage	1.4e-39	40.8
AWS86548.1\|4893272_4893482_+	DUF2635 domain-containing protein	NA	NA	NA	NA
AWS86549.1\|4893483_4894965_+\|tail	phage tail protein	M1Q565	Vibrio_phage	9.6e-167	60.2
AWS86550.1\|4894974_4895328_+\|tail	phage tail protein	A0A2P1A4D6	Alteromonadaceae_phage	7.7e-14	34.2
AWS86551.1\|4895331_4895715_+	hypothetical protein	A0A2P9JZJ9	Alteromonadaceae_phage	3.4e-15	40.5
AWS86552.1\|4895617_4895836_+	hypothetical protein	NA	NA	NA	NA
AWS86553.1\|4895813_4897622_+\|tail	phage tail protein	M4MHE6	Vibrio_phage	3.8e-64	31.4
AWS86554.1\|4897621_4898878_+	multidrug DMT transporter	M4M9N2	Vibrio_phage	2.2e-87	42.0
AWS86555.1\|4898870_4899962_+\|tail	phage tail protein	M4M9L5	Vibrio_phage	1.3e-91	49.0
AWS86556.1\|4899952_4900492_+\|plate	phage baseplate assembly protein V	A0A2I7S9F6	Vibrio_phage	1.1e-32	44.4
AWS86557.1\|4900488_4900941_+	hypothetical protein	A0A2I7S9F0	Vibrio_phage	6.6e-26	43.4
AWS86558.1\|4900927_4902004_+\|plate	phage baseplate protein	A0A2I7S9E5	Vibrio_phage	1.0e-101	52.0
AWS86559.1\|4901988_4902573_+	DUF2313 domain-containing protein	M4M9M8	Vibrio_phage	4.8e-45	47.7
AWS86560.1\|4902575_4903388_+\|tail	phage tail protein	X2KTY7	Enterobacteria_phage	6.9e-26	66.7
AWS86561.1\|4903387_4904263_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.2e-25	37.0
AWS86562.1\|4904272_4906258_+	hypothetical protein	A0A1J0MHZ5	Klebsiella_phage	1.7e-126	45.2
AWS86563.1\|4906254_4906524_+	hypothetical protein	NA	NA	NA	NA
AWS86564.1\|4906623_4909557_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	90.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP029723

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

174 : 24822

Escherichia_phage(45.45%)

protease,transposase,integrase

attL 12619:12634|attR 31166:31181

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS87071.1\|174_879_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	9.9e-138	99.6
AWS87246.1\|1022_1577_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
AWS87072.1\|1768_2473_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWS87073.1\|2618_2909_-	alcohol dehydrogenase	E3SJ82	Synechococcus_phage	4.8e-06	40.6
AWS87248.1\|3003_3504_-	hypothetical protein	NA	NA	NA	NA
AWS87247.1\|3480_4185_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWS87074.1\|4413_5130_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	2.4e-139	100.0
AWS87075.1\|7560_8565_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
AWS87076.1\|8746_8923_-	DUF4102 domain-containing protein	T1S9J3	Salmonella_phage	1.0e-06	68.6
AWS87077.1\|9252_10068_+	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	4.5e-09	27.0
AWS87078.1\|10221_10926_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWS87079.1\|11107_11371_-	hypothetical protein	NA	NA	NA	NA
AWS87080.1\|11465_11744_+	hypothetical protein	NA	NA	NA	NA
AWS87081.1\|11937_12282_+	hypothetical protein	NA	NA	NA	NA
AWS87082.1\|12389_13025_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
12619:12634	attL	NA	NA	NA	NA
AWS87083.1\|13024_15133_-	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	2.4e-38	27.3
AWS87084.1\|15122_16400_-	colicin V secretion protein CvaA	NA	NA	NA	NA
AWS87085.1\|17976_18393_-	PIN domain-containing protein	NA	NA	NA	NA
AWS87086.1\|18389_18620_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
AWS87087.1\|19284_19491_+	hypothetical protein	NA	NA	NA	NA
AWS87088.1\|19536_19845_+	hypothetical protein	NA	NA	NA	NA
AWS87089.1\|19872_20202_+	hypothetical protein	NA	NA	NA	NA
AWS87090.1\|20269_20626_+	hypothetical protein	NA	NA	NA	NA
AWS87091.1\|20632_20965_+	hypothetical protein	NA	NA	NA	NA
AWS87092.1\|20964_21747_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	4.6e-51	90.2
AWS87093.1\|22601_22796_-	hypothetical protein	NA	NA	NA	NA
AWS87094.1\|22960_23434_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
AWS87095.1\|23553_24822_-\|transposase	ISL3 family transposase ISKpn25	Q6V7R1	Burkholderia_virus	5.2e-60	34.7
31166:31181	attR	NA	NA	NA	NA

DBSCAN-SWA_2

29397 : 41489

Enterobacteria_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS87098.1\|29397_31425_-	SAM-dependent DNA methyltransferase	A0A220A2U5	Liberibacter_phage	2.1e-26	26.6
AWS87099.1\|31536_31752_-	hypothetical protein	NA	NA	NA	NA
AWS87100.1\|31976_32309_-	hypothetical protein	NA	NA	NA	NA
AWS87101.1\|32328_32514_-	hypothetical protein	NA	NA	NA	NA
AWS87102.1\|32685_33660_-	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	1.4e-105	62.3
AWS87103.1\|33656_34862_-	ParA family protein	Q1MVJ3	Enterobacteria_phage	7.3e-205	89.0
AWS87104.1\|35183_36080_-	replication initiation protein	Q71TL8	Escherichia_phage	3.3e-69	53.8
AWS87105.1\|36480_37752_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	3.6e-154	63.7
AWS87106.1\|37751_38183_-	translesion error-prone DNA polymerase V subunit UmuD	A0A1W6JNS2	Morganella_phage	1.0e-28	52.5
AWS87107.1\|38414_39386_+	StbA family protein	A0A222YXF2	Escherichia_phage	1.1e-73	46.8
AWS87108.1\|39388_40060_+	Mediator of plasmid stability	NA	NA	NA	NA
AWS87109.1\|40120_40351_+	hypothetical protein	NA	NA	NA	NA
AWS87110.1\|40787_41489_+	DNA methylase	A0A2I7RE86	Vibrio_phage	7.1e-27	36.7

DBSCAN-SWA_3

53680 : 108826

uncultured_Caudovirales_phage(25.0%)

integrase,transposase

attL 69820:69843|attR 108893:108916

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS87128.1\|53680_56698_-\|transposase	Tn3-like element IS3000 family transposase	A0A125RQ78	Bacillus_phage	5.5e-52	24.7
AWS87129.1\|61059_61785_+	type-F conjugative transfer system pilin acetylase TraX	A0A1D6ZIU7	Xanthomonas_phage	7.1e-06	28.8
AWS87130.1\|61856_62450_+	conjugal transfer protein	NA	NA	NA	NA
AWS87131.1\|62616_63213_+	hypothetical protein	NA	NA	NA	NA
AWS87132.1\|63262_63907_+	hypothetical protein	NA	NA	NA	NA
AWS87133.1\|63962_64613_+	DUF2726 domain-containing protein	NA	NA	NA	NA
AWS87134.1\|64609_64918_+	hypothetical protein	K7PKY8	Enterobacterial_phage	1.1e-08	31.7
AWS87135.1\|65294_65999_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWS87136.1\|66098_66464_-	transcriptional regulator	NA	NA	NA	NA
AWS87137.1\|68194_68620_-	mercury transport protein MerC	NA	NA	NA	NA
AWS87138.1\|68647_68923_-	mercuric transporter periplasmic component	NA	NA	NA	NA
AWS87139.1\|68938_69304_-	mercuric ion transporter MerT	NA	NA	NA	NA
AWS87140.1\|69375_69831_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
69820:69843	attL	NA	NA	NA	NA
AWS87141.1\|70090_70618_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	5.7e-21	39.5
AWS87142.1\|70650_71082_-	hypothetical protein	NA	NA	NA	NA
AWS87143.1\|71561_72527_-	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	1.6e-58	42.7
AWS87144.1\|72734_73004_-	hypothetical protein	NA	NA	NA	NA
AWS87145.1\|72996_74481_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AWS87146.1\|74480_74732_-	hypothetical protein	NA	NA	NA	NA
AWS87147.1\|74889_75321_+	peptidase	A0A1W6JNS2	Morganella_phage	1.6e-29	53.3
AWS87148.1\|75320_76592_+	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	4.9e-151	63.3
AWS87149.1\|76673_77651_-	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	2.6e-88	54.4
AWS87150.1\|77647_78853_-	ParA family protein	A0A077SL49	Escherichia_phage	2.4e-163	69.6
AWS87151.1\|79267_79537_+	hypothetical protein	NA	NA	NA	NA
AWS87152.1\|79569_79767_-	hypothetical protein	NA	NA	NA	NA
AWS87153.1\|79893_80760_-	RepB family plasmid replication initiator protein	A0A222YYK1	Escherichia_phage	1.5e-23	31.1
AWS87154.1\|81527_81785_+	hypothetical protein	NA	NA	NA	NA
AWS87155.1\|81842_82619_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	6.4e-53	92.9
AWS87156.1\|82615_83359_-	hypothetical protein	NA	NA	NA	NA
AWS87157.1\|83409_83760_-	hypothetical protein	NA	NA	NA	NA
AWS87250.1\|83903_84338_-	hypothetical protein	NA	NA	NA	NA
AWS87158.1\|84321_84552_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
AWS87159.1\|84844_85549_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWS87160.1\|86198_86531_+	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA
AWS87161.1\|86884_88033_-	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	1.7e-123	65.9
AWS87162.1\|88157_91175_-\|transposase	Tn3-like element IS3000 family transposase	A0A125RQ78	Bacillus_phage	7.2e-52	24.7
AWS87163.1\|91548_91923_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	4.5e-28	56.0
AWS87164.1\|92451_93648_+	MFS transporter	NA	NA	NA	NA
AWS87165.1\|93719_94547_-	universal stress protein	NA	NA	NA	NA
AWS87166.1\|94565_96044_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	1.6e-198	74.0
AWS87167.1\|96527_96881_+	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	5.9e-22	57.1
AWS87168.1\|96976_98260_+	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	2.9e-175	74.6
AWS87169.1\|98309_98738_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	2.3e-52	70.7
AWS87170.1\|99401_100406_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
AWS87171.1\|100484_101042_-	recombinase family protein	A0A0C4UR34	Shigella_phage	3.3e-59	63.2
AWS87172.1\|101035_101407_-	hypothetical protein	NA	NA	NA	NA
AWS87173.1\|101403_101904_-\|transposase	transposase	NA	NA	NA	NA
AWS87174.1\|101900_102227_-	hypothetical protein	NA	NA	NA	NA
AWS87175.1\|102481_102838_-	cupin domain-containing protein	NA	NA	NA	NA
AWS87176.1\|102827_103229_-	DUF86 domain-containing protein	NA	NA	NA	NA
AWS87177.1\|103225_103516_-	nucleotidyltransferase	NA	NA	NA	NA
AWS87178.1\|103578_103884_-\|transposase	transposase	NA	NA	NA	NA
AWS87179.1\|103822_104836_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AWS87251.1\|104981_105773_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
AWS87180.1\|105936_106284_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AWS87181.1\|106277_107117_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AWS87182.1\|107046_107226_-	hypothetical protein	NA	NA	NA	NA
AWS87183.1\|107821_108826_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
108893:108916	attR	NA	NA	NA	NA

DBSCAN-SWA_4

120818 : 177829

Escherichia_phage(21.74%)

integrase,transposase

attL 157642:157686|attR 171844:171888

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWS87197.1\|120818_121640_+\|transposase	heteromeric transposase endonuclease subunit TnsA	NA	NA	NA	NA
AWS87198.1\|121629_123783_+\|transposase	transposase	NA	NA	NA	NA
AWS87199.1\|123772_125221_+	ATP-binding protein	NA	NA	NA	NA
AWS87200.1\|126292_126676_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.1e-13	36.3
AWS87201.1\|126672_127020_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	2.7e-59	95.7
AWS87202.1\|127069_128605_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	2.0e-260	87.7
AWS87252.1\|129363_129573_+	DNA-binding protein	A0A1B1IUF9	uncultured_Mediterranean_phage	2.9e-13	50.9
AWS87203.1\|129640_132610_+	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	8.5e-21	23.8
AWS87204.1\|132609_135249_+	histidinol-phosphatase	A0A1B1IUG5	uncultured_Mediterranean_phage	1.9e-19	20.5
AWS87205.1\|135230_136394_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
AWS87206.1\|136390_137668_+	restriction endonuclease subunit S	E3T4D5	Cafeteria_roenbergensis_virus	1.3e-13	28.2
AWS87207.1\|137664_138780_+	anticodon nuclease	NA	NA	NA	NA
AWS87208.1\|138776_140411_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.7e-103	41.6
AWS87209.1\|140590_141793_+	hypothetical protein	NA	NA	NA	NA
AWS87210.1\|142774_142963_+	hypothetical protein	NA	NA	NA	NA
AWS87211.1\|143266_144124_-	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
AWS87253.1\|144116_144194_-	RepA leader peptide Tap	NA	NA	NA	NA
AWS87254.1\|144425_144677_-	transcriptional regulator	NA	NA	NA	NA
AWS87212.1\|144812_145175_-	endonuclease	NA	NA	NA	NA
AWS87213.1\|145214_145919_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AWS87255.1\|147540_147783_+	relaxase	NA	NA	NA	NA
AWS87214.1\|147814_148492_-	TetR family transcriptional regulator	NA	NA	NA	NA
AWS87215.1\|148570_149770_+	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
AWS87216.1\|149801_150686_-	EamA family transporter	NA	NA	NA	NA
AWS87256.1\|150823_151216_-	cysteine hydrolase	NA	NA	NA	NA
AWS87217.1\|152481_155499_-\|transposase	Tn3-like element IS3000 family transposase	A0A125RQ78	Bacillus_phage	5.5e-52	24.7
AWS87218.1\|155631_155772_-	plasmid stabilization protein	NA	NA	NA	NA
AWS87219.1\|155780_156167_-	hypothetical protein	NA	NA	NA	NA
AWS87220.1\|156712_156973_+	hypothetical protein	NA	NA	NA	NA
AWS87221.1\|156918_157623_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	9.9e-138	99.6
157642:157686	attL	NA	NA	NA	NA
AWS87222.1\|158007_158949_+	hypothetical protein	NA	NA	NA	NA
AWS87223.1\|159529_160216_+	NYN domain-containing protein	NA	NA	NA	NA
AWS87224.1\|160353_161091_+	hypothetical protein	NA	NA	NA	NA
AWS87225.1\|161610_163080_-	HNH endonuclease	G0X580	Salmonella_phage	5.5e-21	51.3
AWS87226.1\|163836_164406_-	recombinase family protein	E5FFF9	Burkholderia_phage	5.2e-36	43.2
AWS87227.1\|164545_164860_-\|transposase	transposase	NA	NA	NA	NA
AWS87228.1\|164798_165812_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AWS87229.1\|165967_166441_+	trimethoprim-resistant dihydrofolate reductase DfrA14	G3MBI7	Bacillus_virus	8.4e-16	28.9
AWS87230.1\|166661_166928_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
AWS87231.1\|167070_167835_+\|transposase	IS6 family transposase IS6100	A0A077SL39	Escherichia_phage	4.3e-86	65.7
AWS87232.1\|167876_168089_+	resolvase	NA	NA	NA	NA
AWS87233.1\|168101_169310_+	restriction endonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
AWS87234.1\|169343_170777_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
AWS87235.1\|171158_171365_-	hypothetical protein	NA	NA	NA	NA
AWS87236.1\|171369_171882_-	restriction endonuclease	NA	NA	NA	NA
AWS87237.1\|172683_173388_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
171844:171888	attR	NA	NA	NA	NA
AWS87238.1\|173485_174605_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	6.0e-52	43.2
AWS87239.1\|174652_175291_+	DUF4113 domain-containing protein	F1C5A5	Cronobacter_phage	8.3e-75	65.5
AWS87240.1\|175702_176578_+	replication initiation protein	Q71TL8	Escherichia_phage	5.6e-82	56.4
AWS87257.1\|177202_177829_+	cobyrinic acid ac-diamide synthase	E5FFJ3	Burkholderia_phage	3.8e-16	30.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP029724

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP029722

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP029723

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection