CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP029020	Candidatus Sulcia muelleri isolate SMAURBIH chromosome, complete genome	1 crisprs	NA	0	1	0	0

Cas Category Instructions

Results visualization

1. CP029020

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CRISPR-Cas detection and classification

Crispr_ID: CP029020_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029020_1

67775-67882

Orphan

Consensus_repeat	Method
GGATGATAGGATTCGAACCTACGACCTCCTGGTCCCAAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029020_1

>merge|CP029020|1|67775-67882|CRISPRCasFinder
GGATGATAGGATTCGAACCTACGACCTCCTGGTCCCAAACAAGGAGGTCGTAGGTTCGAATACTGTCGGGATGATAGGATTCGAACCTACGACCTCCTGGTCCCAAAC

>CP029020|1|1|67775-67882|CRISPRCasFinder
GGATGATAGGATTCGAACCTACGACCTCCTGGTCCCAAAC	AAGGAGGTCGTAGGTTCGAATACTGTCG
GGATGATAGGATTCGAACCTACGACCTCCTGGTCCCAAAC

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NC_011879	Pseudarthrobacter chlorophenolicus A6 plasmid pACHL01, complete sequence	31093-31120	3	0.893
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NZ_LR134450	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence	278336-278363	4	0.857
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MT408532	Synechococcus phage SynMITS9220M01, complete genome	145728-145755	4	0.857
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MT108723	Pseudomonas phage Epa1, complete genome	1808-1835	4	0.857
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NC_028933	Pseudomonas phage PhiCHU, complete genome	44661-44688	4	0.857
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MN871476	UNVERIFIED: Pseudomonas phage PaLz-1-45, complete genome	8337-8364	4	0.857
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	AY078382	Pseudomonas aeruginosa phage PaP3, complete genome	1921-1948	4	0.857
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MT119362	Pseudomonas phage clash, complete genome	43973-44000	4	0.857
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NC_019813	Pseudomonas phage vB_PaeP_p2-10_Or1, complete genome	754-781	4	0.857
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MG432151	Pseudomonas phage Delta, complete genome	920-947	4	0.857
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	HE983844	Pseudomonas phage vB_PaeP_C1-14_Or complete genome	754-781	4	0.857
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MT119373	Pseudomonas phage otherone, complete genome	43993-44020	4	0.857
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	JN254801	Pseudomonas phage MR299-2, complete genome	1806-1833	4	0.857
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NC_029046	Sinorhizobium phage phiLM21, complete genome	21188-21215	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	LQ277708	Sequence 3 from Patent WO2016071503	44759-44786	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NC_010325	Pseudomonas phage LUZ24, complete genome	44612-44639	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NC_005284	Burkholderia phage phi1026b, complete genome	28284-28311	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MT108724	Pseudomonas phage Epa2, complete genome	10475-10502	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	AF447491	Bacteriophage phiE125, complete genome	29023-29050	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MT118288	Pseudomonas phage Epa4, complete genome	25201-25228	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	LZ998057	JP 2017534684-A/4: Phage Therapy	44399-44426	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	LZ998058	JP 2017534684-A/5: Phage Therapy	44084-44111	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MK837012	Pseudomonas virus Pa223, complete genome	44696-44723	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MN562749	Pseudomonas phage U47, complete genome	42376-42403	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MN553586	UNVERIFIED: Pseudomonas phage phiKMVC5-4, complete genome	11653-11680	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	LQ277709	Sequence 4 from Patent WO2016071503	44399-44426	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MH973725	Pseudomonas phage SaPL, complete genome	41780-41807	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MT119371	Pseudomonas phage oldone, complete genome	44689-44716	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	LQ277710	Sequence 5 from Patent WO2016071503	44084-44111	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MG589385	Pseudomonas phage phiPA01_302, complete genome	45001-45028	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MN508619	UNVERIFIED: Pseudomonas phage Paer4, complete genome	11496-11523	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	LZ998056	JP 2017534684-A/3: Phage Therapy	44759-44786	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MK837011	Pseudomonas virus Pa222, complete genome	44701-44728	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	AY453853	Bacteriophage phi1026b, complete genome	28284-28311	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NC_022971	Pseudomonas phage phiIBB-PAA2, complete genome	44359-44386	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	HG518155	Pseudomonas phage TL complete genome	44650-44677	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NC_003309	Burkholderia phage phiE125, complete genome	29023-29050	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	KR054029	Pseudomonas phage DL54, complete genome	1088-1115	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MN871484	UNVERIFIED: Pseudomonas phage PaSz-8_45_45k, complete genome	516-543	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	LN610578	Pseudomonas phage vB_PaeP_C2-10_Ab22, complete genome	44821-44848	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MF768469	Pseudomonas phage SL4, complete genome	35590-35617	5	0.821
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NC_011879	Pseudarthrobacter chlorophenolicus A6 plasmid pACHL01, complete sequence	32224-32251	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1968464-1968491	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NZ_CP010410	Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence	62697-62724	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NZ_CP053208	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence	123557-123584	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MK448998	Streptococcus phage Javan636, complete genome	16223-16250	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MN732867	Erwinia phage Hena1, complete genome	56988-57015	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NZ_CP018784	Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence	261716-261743	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NZ_CP040048	Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence	606212-606239	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NZ_CP040048	Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence	606535-606562	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NC_047733	Synechococcus phage S-RIM8 isolate RW_22_0300, complete genome	157735-157762	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	JF974289	Synechococcus phage S-RIM8 A.HR3, complete genome	157730-157757	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MK493323	Synechococcus phage S-RIM8 isolate RW_03_0617, complete genome	158289-158316	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MK493325	Synechococcus phage S-RIM8 isolate RW_62_0316, complete genome	157974-158001	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MK493322	Synechococcus phage S-RIM8 isolate RW_01_0115_WH8101, complete genome	157380-157407	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	KX349288	Synechococcus phage S-RIM8 isolate RW_08_0711, complete genome	157380-157407	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NC_020486	Synechococcus phage S-RIM8 A.HR1, complete genome	157730-157757	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	KX349286	Synechococcus phage S-RIM8 isolate RW_03_0807_WH8101, complete genome	157060-157087	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	HQ317385	Synechococcus phage S-RIM8 A.HR5, complete genome	154847-154874	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MK493324	Synechococcus phage S-RIM8 isolate RW_22_0214, complete genome	157388-157415	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	KX349290	Synechococcus phage S-RIM8 isolate RW_25_1112, complete genome	157974-158001	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	KX349285	Synechococcus phage S-RIM8 isolate RW_01_0212_WH8101, complete genome	158289-158316	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	KX349287	Synechococcus phage S-RIM8 isolate RW_06_0613, complete genome	157974-158001	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	JN638751	Bacillus phage G, complete genome	410960-410987	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	JF974293	Cyanophage KBS-M-1A genomic sequence	59575-59602	6	0.786
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	FQ857195	Erwinia phage phiEa116, WORKING DRAFT SEQUENCE, 6 unordered pieces	7983-8010	7	0.75
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NC_015292	Erwinia phage phiEa104, complete genome	22517-22544	7	0.75
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	MH426725	Erwinia phage SunLIRen, complete genome	22510-22537	7	0.75
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	FQ482083	Erwinia amylovora phage phiEa104 complete genome	22517-22544	7	0.75
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	HQ728263	Erwinia phage vB_EamM-M7, complete genome	5503-5530	7	0.75
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NC_011811	Erwinia phage phiEa21-4, complete genome	22528-22555	7	0.75
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NC_012858	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence	468254-468281	7	0.75
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	NC_019529	Vibrio phage pVp-1, complete genome	38854-38881	7	0.75
CP029020_1	1.1\|67815\|28\|CP029020\|CRISPRCasFinder	67815-67842	28	KT345706	Vibrio phage vB_VorS-PVo5, complete genome	1370-1397	7	0.75

1. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NC_011879 (Pseudarthrobacter chlorophenolicus A6 plasmid pACHL01, complete sequence) position: , mismatch: 3, identity: 0.893

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgcaggttcgaatcctgtcg	Protospacer
 *********.********** ******

2. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NZ_LR134450 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence) position: , mismatch: 4, identity: 0.857

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
gaggaggtcgcaggttcgaatcctgtca	Protospacer
.*********.********** *****.

3. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MT408532 (Synechococcus phage SynMITS9220M01, complete genome) position: , mismatch: 4, identity: 0.857

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgcaggttcgaatcctgtca	Protospacer
 *********.********** *****.

4. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MT108723 (Pseudomonas phage Epa1, complete genome) position: , mismatch: 4, identity: 0.857

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgaatcctaccg	Protospacer
 ******************** **..**

5. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NC_028933 (Pseudomonas phage PhiCHU, complete genome) position: , mismatch: 4, identity: 0.857

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgaatcctaccg	Protospacer
 ******************** **..**

6. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MN871476 (UNVERIFIED: Pseudomonas phage PaLz-1-45, complete genome) position: , mismatch: 4, identity: 0.857

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgaatcctaccg	Protospacer
 ******************** **..**

7. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to AY078382 (Pseudomonas aeruginosa phage PaP3, complete genome) position: , mismatch: 4, identity: 0.857

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgaatcctaccg	Protospacer
 ******************** **..**

8. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MT119362 (Pseudomonas phage clash, complete genome) position: , mismatch: 4, identity: 0.857

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgaatcctaccg	Protospacer
 ******************** **..**

9. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NC_019813 (Pseudomonas phage vB_PaeP_p2-10_Or1, complete genome) position: , mismatch: 4, identity: 0.857

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgaatcctaccg	Protospacer
 ******************** **..**

10. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MG432151 (Pseudomonas phage Delta, complete genome) position: , mismatch: 4, identity: 0.857

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgaatcctaccg	Protospacer
 ******************** **..**

11. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to HE983844 (Pseudomonas phage vB_PaeP_C1-14_Or complete genome) position: , mismatch: 4, identity: 0.857

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgaatcctaccg	Protospacer
 ******************** **..**

12. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MT119373 (Pseudomonas phage otherone, complete genome) position: , mismatch: 4, identity: 0.857

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgaatcctaccg	Protospacer
 ******************** **..**

13. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to JN254801 (Pseudomonas phage MR299-2, complete genome) position: , mismatch: 4, identity: 0.857

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgaatcctaccg	Protospacer
 ******************** **..**

14. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NC_029046 (Sinorhizobium phage phiLM21, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
cacgaggtcgcaggttcgaatcctgtct	Protospacer
 * *******.********** *****

15. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to LQ277708 (Sequence 3 from Patent WO2016071503) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

16. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NC_010325 (Pseudomonas phage LUZ24, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

17. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NC_005284 (Burkholderia phage phi1026b, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
cagagggtcgtaggttcgaatcctatcg	Protospacer
 **..**************** **.***

18. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MT108724 (Pseudomonas phage Epa2, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

19. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to AF447491 (Bacteriophage phiE125, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
cagagggtcgtaggttcgaatcctatcg	Protospacer
 **..**************** **.***

20. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MT118288 (Pseudomonas phage Epa4, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

21. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to LZ998057 (JP 2017534684-A/4: Phage Therapy) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

22. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to LZ998058 (JP 2017534684-A/5: Phage Therapy) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

23. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MK837012 (Pseudomonas virus Pa223, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

24. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MN562749 (Pseudomonas phage U47, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

25. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MN553586 (UNVERIFIED: Pseudomonas phage phiKMVC5-4, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

26. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to LQ277709 (Sequence 4 from Patent WO2016071503) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

27. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MH973725 (Pseudomonas phage SaPL, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

28. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MT119371 (Pseudomonas phage oldone, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

29. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to LQ277710 (Sequence 5 from Patent WO2016071503) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

30. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MG589385 (Pseudomonas phage phiPA01_302, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

31. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MN508619 (UNVERIFIED: Pseudomonas phage Paer4, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

32. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to LZ998056 (JP 2017534684-A/3: Phage Therapy) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

33. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MK837011 (Pseudomonas virus Pa222, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

34. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to AY453853 (Bacteriophage phi1026b, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
cagagggtcgtaggttcgaatcctatcg	Protospacer
 **..**************** **.***

35. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NC_022971 (Pseudomonas phage phiIBB-PAA2, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

36. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to HG518155 (Pseudomonas phage TL complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

37. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NC_003309 (Burkholderia phage phiE125, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
cagagggtcgtaggttcgaatcctatcg	Protospacer
 **..**************** **.***

38. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to KR054029 (Pseudomonas phage DL54, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

39. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MN871484 (UNVERIFIED: Pseudomonas phage PaSz-8_45_45k, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

40. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to LN610578 (Pseudomonas phage vB_PaeP_C2-10_Ab22, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

41. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MF768469 (Pseudomonas phage SL4, complete genome) position: , mismatch: 5, identity: 0.821

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctaccg	Protospacer
 ******************.* **..**

42. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NC_011879 (Pseudarthrobacter chlorophenolicus A6 plasmid pACHL01, complete sequence) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
cggaaggtcgcagtttcgaatactgtca	Protospacer
 .*.******.** *************.

43. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
ccagaggtcgcaggttcgaatcctgtcc	Protospacer
  .*******.********** *****

44. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NZ_CP010410 (Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
gtagaggtcgcaggttcgaatcctgtct	Protospacer
. .*******.********** *****

45. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NZ_CP053208 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
ccaaaggtcataggttcgaatcctgtcg	Protospacer
  ..*****.*********** ******

46. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MK448998 (Streptococcus phage Javan636, complete genome) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggttgtaggttcgaatcctgcta	Protospacer
 *******.************ ***...

47. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MN732867 (Erwinia phage Hena1, complete genome) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caggaggtcgtaggttcgagtcctgcaa	Protospacer
 ******************.* ***. .

48. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NZ_CP018784 (Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
cggaaggtcgcaggttcgaatcctgtcc	Protospacer
 .*.******.********** *****

49. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NZ_CP040048 (Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
cagggggtcgtaggttcgaatcctactg	Protospacer
 ***.**************** **...*

50. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NZ_CP040048 (Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
cagggggtcgtaggttcgaatcctactg	Protospacer
 ***.**************** **...*

51. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NC_047733 (Synechococcus phage S-RIM8 isolate RW_22_0300, complete genome) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caataggtcgcaggttcgaatcctgtca	Protospacer
 *. ******.********** *****.

52. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to JF974289 (Synechococcus phage S-RIM8 A.HR3, complete genome) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caataggtcgcaggttcgaatcctgtca	Protospacer
 *. ******.********** *****.

53. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MK493323 (Synechococcus phage S-RIM8 isolate RW_03_0617, complete genome) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caataggtcgcaggttcgaatcctgtca	Protospacer
 *. ******.********** *****.

54. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MK493325 (Synechococcus phage S-RIM8 isolate RW_62_0316, complete genome) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caataggtcgcaggttcgaatcctgtca	Protospacer
 *. ******.********** *****.

55. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MK493322 (Synechococcus phage S-RIM8 isolate RW_01_0115_WH8101, complete genome) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caataggtcgcaggttcgaatcctgtca	Protospacer
 *. ******.********** *****.

56. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to KX349288 (Synechococcus phage S-RIM8 isolate RW_08_0711, complete genome) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caataggtcgcaggttcgaatcctgtca	Protospacer
 *. ******.********** *****.

57. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NC_020486 (Synechococcus phage S-RIM8 A.HR1, complete genome) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caataggtcgcaggttcgaatcctgtca	Protospacer
 *. ******.********** *****.

58. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to KX349286 (Synechococcus phage S-RIM8 isolate RW_03_0807_WH8101, complete genome) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caataggtcgcaggttcgaatcctgtca	Protospacer
 *. ******.********** *****.

59. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to HQ317385 (Synechococcus phage S-RIM8 A.HR5, complete genome) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caataggtcgcaggttcgaatcctgtca	Protospacer
 *. ******.********** *****.

60. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MK493324 (Synechococcus phage S-RIM8 isolate RW_22_0214, complete genome) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caataggtcgcaggttcgaatcctgtca	Protospacer
 *. ******.********** *****.

61. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to KX349290 (Synechococcus phage S-RIM8 isolate RW_25_1112, complete genome) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caataggtcgcaggttcgaatcctgtca	Protospacer
 *. ******.********** *****.

62. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to KX349285 (Synechococcus phage S-RIM8 isolate RW_01_0212_WH8101, complete genome) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caataggtcgcaggttcgaatcctgtca	Protospacer
 *. ******.********** *****.

63. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to KX349287 (Synechococcus phage S-RIM8 isolate RW_06_0613, complete genome) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caataggtcgcaggttcgaatcctgtca	Protospacer
 *. ******.********** *****.

64. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
cagggggtcgtaggttcgaatcctacct	Protospacer
 ***.**************** **..*

65. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to JF974293 (Cyanophage KBS-M-1A genomic sequence) position: , mismatch: 6, identity: 0.786

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
caataggtcgcaggttcgaatcctgtca	Protospacer
 *. ******.********** *****.

66. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to FQ857195 (Erwinia phage phiEa116, WORKING DRAFT SEQUENCE, 6 unordered pieces) position: , mismatch: 7, identity: 0.75

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
ctggaggtcgtaggttcgaatcctactc	Protospacer
  ******************* **...

67. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NC_015292 (Erwinia phage phiEa104, complete genome) position: , mismatch: 7, identity: 0.75

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
ctggaggtcgtaggttcgaatcctactc	Protospacer
  ******************* **...

68. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to MH426725 (Erwinia phage SunLIRen, complete genome) position: , mismatch: 7, identity: 0.75

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
ctggaggtcgtaggttcgaatcctactc	Protospacer
  ******************* **...

69. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to FQ482083 (Erwinia amylovora phage phiEa104 complete genome) position: , mismatch: 7, identity: 0.75

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
ctggaggtcgtaggttcgaatcctactc	Protospacer
  ******************* **...

70. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to HQ728263 (Erwinia phage vB_EamM-M7, complete genome) position: , mismatch: 7, identity: 0.75

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
ctggaggtcgtaggttcgaatcctactc	Protospacer
  ******************* **...

71. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NC_011811 (Erwinia phage phiEa21-4, complete genome) position: , mismatch: 7, identity: 0.75

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
ctggaggtcgtaggttcgaatcctactc	Protospacer
  ******************* **...

72. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NC_012858 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence) position: , mismatch: 7, identity: 0.75

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
tcaatggtcataggttcgaatcctgtcg	Protospacer
  .. ****.*********** ******

73. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to NC_019529 (Vibrio phage pVp-1, complete genome) position: , mismatch: 7, identity: 0.75

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
cgagaggtcgtaggttcgaatcctacct	Protospacer
 ..****************** **..*

74. spacer 1.1|67815|28|CP029020|CRISPRCasFinder matches to KT345706 (Vibrio phage vB_VorS-PVo5, complete genome) position: , mismatch: 7, identity: 0.75

aaggaggtcgtaggttcgaatactgtcg	CRISPR spacer
cgagaggtcgtaggttcgaatcctacct	Protospacer
 ..****************** **..*

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage