CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP029024	Candidatus Sulcia muelleri isolate SMTERVAC chromosome, complete genome	1 crisprs	NA	1	2	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP029024_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029024_1

239378-239646

Orphan

Consensus_repeat	Method
TAAAAATTTTTAATAAATTGAAAANA	CRT

5 spacers

The CRISPR arrays of CP029024_1

>merge|CP029024|1|239378-239646|CRT
TAAAAATTTTTAATAAATTGAAAATAAAGGCTAATTTAGATAAATTAAAAATTTTTAATAAATTGAAAATAAATTATAATTTAGATAAATTAAAAATTTTAAATAAATTGAAAAACTTTTCTTCTTTAGAATTAGAAGAATTATTAAAAATTTTTAATAAATTGAAAAAATATTTTAATTATTTTAATTTAGGGATTTTAAAAAATTTTAATAAATTTAAAAAATGTTCTCAGTTAGAGAGATTAAAAATTTTTAATCAATTGAAAAAA

>CP029024|1|1|239378-239646|CRT
TAAAAATTTTTAATAAATTGAAAATA	AAGGCTAATTTAGATAAAT
TAAAAATTTTTAATAAATTGAAAATA	AATTATAATTTAGATAAAT
TAAAAATTTTAAATAAATTGAAAAAC	TTTTCTTCTTTAGAATTAGAAGAATTAT
TAAAAATTTTTAATAAATTGAAAAAA	TATTTTAATTATTTTAATTTAGGGATTT
TAAAAAATTTTAATAAATTTAAAAAA	TGTTCTCAGTTAGAGAGAT
TAAAAATTTTTAATCAATTGAAAAAA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP029024_1	1.2\|239449\|19\|CP029024\|CRT	239449-239467	19	CP029024.1	78766-78784	2	0.895

1. spacer 1.2|239449|19|CP029024|CRT matches to position: 78766-78784, mismatch: 2, identity: 0.895

aattataatttagataaat	CRISPR spacer
aattcaaatttagataaat	Protospacer
****  *************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	96875-96902	4	0.857
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NC_011258	Borrelia recurrentis A1 plasmid pl37, complete sequence	1905-1932	4	0.857
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NC_011224	Borrelia duttonii Ly plasmid pl11, complete sequence	1806-1833	4	0.857
CP029024_1	1.3\|239494\|28\|CP029024\|CRT	239494-239521	28	MN694510	Marine virus AFVG_250M493, complete genome	27516-27543	5	0.821
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	MN562221	Photobacterium phage PDCC-1, complete genome	121795-121822	5	0.821
CP029024_1	1.3\|239494\|28\|CP029024\|CRT	239494-239521	28	MF001355	Proteus phage PM2, partial genome	4826-4853	6	0.786
CP029024_1	1.3\|239494\|28\|CP029024\|CRT	239494-239521	28	KP890823	Proteus phage vB_PmiM_Pm5461, complete genome	18498-18525	6	0.786
CP029024_1	1.3\|239494\|28\|CP029024\|CRT	239494-239521	28	KT264824	Gokushovirus WZ-2015a isolate 76Mky15, complete genome	2478-2505	6	0.786
CP029024_1	1.3\|239494\|28\|CP029024\|CRT	239494-239521	28	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	72188-72215	6	0.786
CP029024_1	1.3\|239494\|28\|CP029024\|CRT	239494-239521	28	KY593455	Yersinia phage fHe-Yen9-01, complete genome	112056-112083	6	0.786
CP029024_1	1.3\|239494\|28\|CP029024\|CRT	239494-239521	28	NC_019909	Yersinia phage phiR1-RT complete genome	110967-110994	6	0.786
CP029024_1	1.3\|239494\|28\|CP029024\|CRT	239494-239521	28	NC_028820	Yersinia phage vB_YenM_TG1, complete genome	102551-102578	6	0.786
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_KX520649	Staphylococcus epidermidis strain 14-01514 plasmid p14-01514, complete sequence	22844-22871	6	0.786
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_KM521837	Staphylococcus epidermidis strain 12-02300 plasmid p12-02300, complete sequence	21903-21930	6	0.786
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP028164	Staphylococcus aureus strain CFSAN064038 plasmid pGMI17-006, complete sequence	43408-43435	6	0.786
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	MT074141	Bacteroides phage DAC22, complete genome	79119-79146	6	0.786
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	KJ936628	Vibrio phage VPp1, complete genome	30938-30965	6	0.786
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	KJ473422	Acinetobacter phage vB_AbaM_Acibel004, complete genome	17165-17192	6	0.786
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	MF431726	Vibrio phage vB_ValP_IME271, complete genome	298-325	6	0.786
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	MK483107	Vibrio phage vB_VpP_BA6, complete genome	333-360	6	0.786
CP029024_1	1.3\|239494\|28\|CP029024\|CRT	239494-239521	28	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	16272-16299	7	0.75
CP029024_1	1.3\|239494\|28\|CP029024\|CRT	239494-239521	28	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	16272-16299	7	0.75
CP029024_1	1.3\|239494\|28\|CP029024\|CRT	239494-239521	28	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	6590-6617	7	0.75
CP029024_1	1.3\|239494\|28\|CP029024\|CRT	239494-239521	28	NC_013509	Edwardsiella tarda EIB202 plasmid pEIB202, complete sequence	20936-20963	7	0.75
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP024036	Bacillus aryabhattai strain K13 plasmid unnamed1	110678-110705	7	0.75
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	CP019152	Acinetobacter lwoffii strain ZS207 plasmid pZS-2, complete sequence	10420-10447	7	0.75
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP013709	Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence	138968-138995	7	0.75
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP009639	Bacillus cereus 03BB108 plasmid pBFI_1, complete sequence	219808-219835	7	0.75
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP015630	Borrelia turicatae strain BTE5EL plasmid lp159	152284-152311	7	0.75
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP013844	Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence	184405-184432	7	0.75
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP053963	Bacillus cereus strain FDAARGOS_802 plasmid unnamed3, complete sequence	261392-261419	7	0.75
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	KT997868	Uncultured Mediterranean phage uvDeep-CGR2-KM24-C165, complete genome	16369-16396	7	0.75
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP012100	Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence	388678-388705	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP016596	Bacillus cereus strain K8 plasmid pBCM301, complete sequence	288657-288684	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP028889	Borrelia turcica IST7 plasmid lp35, complete sequence	20750-20777	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NC_010180	Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence	46247-46274	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	499870-499897	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP013276	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-1-360K, complete sequence	67838-67865	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP010112	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence	169742-169769	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP043831	Bacillus sp. BS98 plasmid unnamed1	271309-271336	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP039722	Bacillus thuringiensis strain BT-59 plasmid p1, complete sequence	205182-205209	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	CP024686	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence	269841-269868	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NC_018688	Bacillus thuringiensis MC28 plasmid pMC319, complete sequence	128909-128936	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NC_018689	Bacillus thuringiensis MC28 plasmid pMC429, complete sequence	328083-328110	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP045608	Bacillus cereus strain SB1 plasmid p2, complete sequence	239915-239942	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP015730	Bacillus cereus strain A1 plasmid pBCA1, complete sequence	105195-105222	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP009349	Bacillus thuringiensis HD1002 plasmid 1, complete sequence	143838-143865	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP045023	Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence	67839-67866	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP018741	Bacillus cereus strain FORC_047 plasmid pFORC47_1, complete sequence	169583-169610	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	73988-74015	8	0.714
CP029024_1	1.4\|239548\|28\|CP029024\|CRT	239548-239575	28	NZ_CP016590	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-02, complete sequence	243495-243522	8	0.714

1. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 4, identity: 0.857

tattttaattattttaatttagggattt	CRISPR spacer
tatttttattagtttaatttagggatgg	Protospacer
****** **** **************

2. spacer 1.4|239548|28|CP029024|CRT matches to NC_011258 (Borrelia recurrentis A1 plasmid pl37, complete sequence) position: , mismatch: 4, identity: 0.857

tattttaattattttaatttagggattt---	CRISPR spacer
tattttaattattttaatatag---tttgaa	Protospacer
****************** ***   ***

3. spacer 1.4|239548|28|CP029024|CRT matches to NC_011224 (Borrelia duttonii Ly plasmid pl11, complete sequence) position: , mismatch: 4, identity: 0.857

tattttaattattttaatttagggattt---	CRISPR spacer
tattttaattattttaatatag---tttgaa	Protospacer
****************** ***   ***

4. spacer 1.3|239494|28|CP029024|CRT matches to MN694510 (Marine virus AFVG_250M493, complete genome) position: , mismatch: 5, identity: 0.821

ttttcttctttagaattagaagaattat	CRISPR spacer
atttcttctttagaattaaacgaacttt	Protospacer
 *****************.* ***.* *

5. spacer 1.4|239548|28|CP029024|CRT matches to MN562221 (Photobacterium phage PDCC-1, complete genome) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttagggattt	CRISPR spacer
tattttaattattttgatttagagttaa	Protospacer
***************.******.* *

6. spacer 1.3|239494|28|CP029024|CRT matches to MF001355 (Proteus phage PM2, partial genome) position: , mismatch: 6, identity: 0.786

ttttcttctttagaattagaagaattat	CRISPR spacer
tcatcttctttagaattagaagagtgcc	Protospacer
*. ********************.*  .

7. spacer 1.3|239494|28|CP029024|CRT matches to KP890823 (Proteus phage vB_PmiM_Pm5461, complete genome) position: , mismatch: 6, identity: 0.786

ttttcttctttagaattagaagaattat	CRISPR spacer
tcatcttctttagaattagaagagtgcc	Protospacer
*. ********************.*  .

8. spacer 1.3|239494|28|CP029024|CRT matches to KT264824 (Gokushovirus WZ-2015a isolate 76Mky15, complete genome) position: , mismatch: 6, identity: 0.786

ttttcttctttagaattagaagaattat	CRISPR spacer
ttttcttctttagaattaaaaacctgct	Protospacer
******************.**.  *  *

9. spacer 1.3|239494|28|CP029024|CRT matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 6, identity: 0.786

ttttcttctttagaattagaagaattat	CRISPR spacer
ataccttctgtagtattagaagaattag	Protospacer
 * .***** *** *************

10. spacer 1.3|239494|28|CP029024|CRT matches to KY593455 (Yersinia phage fHe-Yen9-01, complete genome) position: , mismatch: 6, identity: 0.786

ttttcttctttagaattagaagaattat	CRISPR spacer
tcttcttctttagaaccagaagaatgcc	Protospacer
*.*************..********  .

11. spacer 1.3|239494|28|CP029024|CRT matches to NC_019909 (Yersinia phage phiR1-RT complete genome) position: , mismatch: 6, identity: 0.786

ttttcttctttagaattagaagaattat	CRISPR spacer
tcttcttctttagaaccagaagaatgcc	Protospacer
*.*************..********  .

12. spacer 1.3|239494|28|CP029024|CRT matches to NC_028820 (Yersinia phage vB_YenM_TG1, complete genome) position: , mismatch: 6, identity: 0.786

ttttcttctttagaattagaagaattat	CRISPR spacer
tcttcttctttagaaccagaagaatgcc	Protospacer
*.*************..********  .

13. spacer 1.4|239548|28|CP029024|CRT matches to NZ_KX520649 (Staphylococcus epidermidis strain 14-01514 plasmid p14-01514, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttagggattt	CRISPR spacer
tattttaattatattaatttaaaaggtt	Protospacer
************ ********.... **

14. spacer 1.4|239548|28|CP029024|CRT matches to NZ_KM521837 (Staphylococcus epidermidis strain 12-02300 plasmid p12-02300, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttagggattt	CRISPR spacer
tattttaattatattaatttaaaaggtt	Protospacer
************ ********.... **

15. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP028164 (Staphylococcus aureus strain CFSAN064038 plasmid pGMI17-006, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttagggattt	CRISPR spacer
tattttaattatattaatttaaaaggtt	Protospacer
************ ********.... **

16. spacer 1.4|239548|28|CP029024|CRT matches to MT074141 (Bacteroides phage DAC22, complete genome) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttagggattt	CRISPR spacer
tattttaattagtttaatttattcttat	Protospacer
*********** *********    * *

17. spacer 1.4|239548|28|CP029024|CRT matches to KJ936628 (Vibrio phage VPp1, complete genome) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttagggattt	CRISPR spacer
tattttaattatttttatttatccttat	Protospacer
*************** *****    * *

18. spacer 1.4|239548|28|CP029024|CRT matches to KJ473422 (Acinetobacter phage vB_AbaM_Acibel004, complete genome) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttagggattt	CRISPR spacer
tattttaagtattataatttaggtgtga	Protospacer
******** **** ********* .*

19. spacer 1.4|239548|28|CP029024|CRT matches to MF431726 (Vibrio phage vB_ValP_IME271, complete genome) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttagggattt	CRISPR spacer
tattttaattatttttatttatttttat	Protospacer
*************** *****    * *

20. spacer 1.4|239548|28|CP029024|CRT matches to MK483107 (Vibrio phage vB_VpP_BA6, complete genome) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttagggattt	CRISPR spacer
tattttaattatttttatttatccttat	Protospacer
*************** *****    * *

21. spacer 1.3|239494|28|CP029024|CRT matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 7, identity: 0.75

ttttcttctttagaattagaagaattat	CRISPR spacer
gtttcttctttagaatcagaaaaacctg	Protospacer
 ***************.****.**..

22. spacer 1.3|239494|28|CP029024|CRT matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 7, identity: 0.75

ttttcttctttagaattagaagaattat	CRISPR spacer
gtttcttctttagaatcagaaaaacctg	Protospacer
 ***************.****.**..

23. spacer 1.3|239494|28|CP029024|CRT matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 7, identity: 0.75

ttttcttctttagaattagaagaattat	CRISPR spacer
gtttcttctttagaatcagaaaaacctg	Protospacer
 ***************.****.**..

24. spacer 1.3|239494|28|CP029024|CRT matches to NC_013509 (Edwardsiella tarda EIB202 plasmid pEIB202, complete sequence) position: , mismatch: 7, identity: 0.75

ttttcttctttagaattagaagaattat	CRISPR spacer
gtttcttctttagaatcagaaaaacctg	Protospacer
 ***************.****.**..

25. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP024036 (Bacillus aryabhattai strain K13 plasmid unnamed1) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttagggattt	CRISPR spacer
tattttaattattttaacttatattata	Protospacer
*****************.*** .   *

26. spacer 1.4|239548|28|CP029024|CRT matches to CP019152 (Acinetobacter lwoffii strain ZS207 plasmid pZS-2, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttagggattt	CRISPR spacer
tattttaattaatttaatttaatatctc	Protospacer
*********** *********. . .*.

27. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttagggattt	CRISPR spacer
ttattaaattattttaatttagggtcaa	Protospacer
*  ** ****************** .

28. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP009639 (Bacillus cereus 03BB108 plasmid pBFI_1, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttagggattt	CRISPR spacer
cggggtaatttttttaatttaggcattt	Protospacer
..   ***** ************ ****

29. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP015630 (Borrelia turicatae strain BTE5EL plasmid lp159) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttagggattt	CRISPR spacer
tattttaatcattttaatttataaggta	Protospacer
*********.*********** ... *

30. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttagggattt	CRISPR spacer
ttattaaattattttaatttagggtcaa	Protospacer
*  ** ****************** .

31. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP053963 (Bacillus cereus strain FDAARGOS_802 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttagggattt	CRISPR spacer
cggggtaatttttttaatttaggcattt	Protospacer
..   ***** ************ ****

32. spacer 1.4|239548|28|CP029024|CRT matches to KT997868 (Uncultured Mediterranean phage uvDeep-CGR2-KM24-C165, complete genome) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttagggattt	CRISPR spacer
acaaataattattttaatgtaggtattt	Protospacer
     ************* **** ****

33. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****. .. .

34. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP016596 (Bacillus cereus strain K8 plasmid pBCM301, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****. .. .

35. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP028889 (Borrelia turcica IST7 plasmid lp35, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
catttttattattttaatttagtagaga	Protospacer
.***** *************** ..

36. spacer 1.4|239548|28|CP029024|CRT matches to NC_010180 (Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****. .. .

37. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****. .. .

38. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP013276 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-1-360K, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****. .. .

39. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP010112 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****. .. .

40. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP043831 (Bacillus sp. BS98 plasmid unnamed1) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****. .. .

41. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP039722 (Bacillus thuringiensis strain BT-59 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****. .. .

42. spacer 1.4|239548|28|CP029024|CRT matches to CP024686 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****. .. .

43. spacer 1.4|239548|28|CP029024|CRT matches to NC_018688 (Bacillus thuringiensis MC28 plasmid pMC319, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
tattttaatttttttaatttatactccg	Protospacer
********** ********** .  ..

44. spacer 1.4|239548|28|CP029024|CRT matches to NC_018689 (Bacillus thuringiensis MC28 plasmid pMC429, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****. .. .

45. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP045608 (Bacillus cereus strain SB1 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****. .. .

46. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP015730 (Bacillus cereus strain A1 plasmid pBCA1, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****. .. .

47. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP009349 (Bacillus thuringiensis HD1002 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****. .. .

48. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP045023 (Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****. .. .

49. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP018741 (Bacillus cereus strain FORC_047 plasmid pFORC47_1, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****. .. .

50. spacer 1.4|239548|28|CP029024|CRT matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****. .. .

51. spacer 1.4|239548|28|CP029024|CRT matches to NZ_CP016590 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-02, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttagggattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****. .. .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage