CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
AP018447	Helicobacter cinaedi P06D0798 DNA, complete genome	4 crisprs	NA	24	34	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: AP018447_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP018447_1

148360-148483

Orphan

Consensus_repeat	Method
ATTCTTATGGAGAGTTTG	PILER-CR

2 spacers

The CRISPR arrays of AP018447_1

>merge|AP018447|1|148360-148483|PILER-CR
ATTCTTATGGAGAGTTTAGCCATTGATTGATTCTTTGGCTCAAATTCCCCATTCTTATGGAGAGTTTGCTACTATTAATTATTTTTGATAGATACAAACTCCCATAATTTTTATGGAGAGTTTG

>AP018447|1|1|148360-148483|PILER-CR
ATTCTTATGGAGAGTTTA	GCCATTGATTGATTCTTTGGCTCAAATTCCCC
ATTCTTATGGAGAGTTTG	CTACTATTAATTATTTTTGATAGATACAAACTCCCATA
ATTTTTATGGAGAGTTTG

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Crispr_ID: AP018447_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP018447_2

544164-544287

Orphan

Consensus_repeat	Method
ATTCTTATGGAGAGTTTG	PILER-CR

2 spacers

The CRISPR arrays of AP018447_2

>merge|AP018447|2|544164-544287|PILER-CR
ATTCTTATGGAGAGTTTAGCCATTGATTGATTCTTTGGCTCAAATTCCCCATTCTTATGGAGAGTTTGCTACTATTAATTATTTTTGATAGATACAAACTCCCATAATTTTTATGGAGAGTTTG

>AP018447|2|2|544164-544287|PILER-CR
ATTCTTATGGAGAGTTTA	GCCATTGATTGATTCTTTGGCTCAAATTCCCC
ATTCTTATGGAGAGTTTG	CTACTATTAATTATTTTTGATAGATACAAACTCCCATA
ATTTTTATGGAGAGTTTG

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Crispr_ID: AP018447_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP018447_3

1357642-1360138

Orphan

Consensus_repeat	Method
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	CRISPRCasFinder
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	CRT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	PILER-CR

37 spacers

The CRISPR arrays of AP018447_3

>merge|AP018447|3|1357642-1360138|CRISPRCasFinder,CRT,PILER-CR
ATTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATTAAATAAAGGATTAGTAAATTTAGCAAACAGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATATACTTCACAATCACATTGTAACTTAGCTTGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATAAAAAATTCCTCCAATGTGGAAAAACCTGTGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATATATTGAAGTCACAGAAAAAGGGTTCAGAGGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATTGATTTTCTCTATGATTTCTACGATTTTTTTGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATTCGTAATCGAGGGACTCGAGCTTGATTCTGAGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATTTCACTGATTTGGAGAATTGATTTGCTGCCGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATGGTATTCGGGGCGTTGTATGCGGCTGTCCTGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATCTCTGGGCGAATTGAAAGAAATCCAATAATGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATTCAAAATTGTGATCGAAAGACTCCAAGAATGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATTTTGAGTCCTTCGCCCCCATATATCCAAACGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATTCCGCTTTCACCGGGGACGATGTGTTTAAGTGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATAAGCTCATATCGCGGTAATCGTGGCAGTCAAGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATACCGGGGAATAAAACGCCCCTTGAGAGTTGGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATACCGGGGAATAAAACGCCCCTTGAGAGTTGGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATAAAAGCCTAAAAGACTTTAAGCAAGCAAAACTAGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATACAAGCAAGACACTTGCCACAGGGCATGGGGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATTACGACATCGGGGATTACGCCGAGGCCGAGGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATTTCAGTATCCCATATATCCAAATATTTGAAGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATATTTTAGAGAGTGAAGTAACAGGCGAAAAAGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATAAACGCTTATATATGGACAGAGGGAATAACGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATAGCTAAAAAAAATGGGGAGGTGGAAAAATGAGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATCTAAAAGTGTTTGCATAAGATCTAAAAGCAAAAGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATTAACTTCATTCTTTAAAAGAGGCAAACAATGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATAGACATATTATGGACGAAAACAAGAAAAAAGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATCAATGACTTGCTTTTATTGTATCGTGAATCTGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATTTAGCATAGTTTCATTAAATGCTTTTTGTGAAGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATTGGTCTCCATTCATCATATGCAAGTGAAAGAGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATATCCTCGCTATCGACATCAAAATCATAGGTGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATATTCTGTTGCATAGAATACTGCCGCTGCTGGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATTTTTTTTTTTTTTAACCCAAAGGAGTTTTTGGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATAAAAACGATTTTAAAATAGAGGAGTGCGAAGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATTTCTCTAGCCACTCATTGAGCGTTTTTTCAGGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATGTGCCAGTTTTCCTCCAAGAAACAATTCCAGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATGGAGCTAACGAGAAAATCAAGGAAAAAATCTGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATAAATCTCCTGTATCAGAAGCATGTTTGAATGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAATTTATCATTTTTTTTTCGGAAATACCCGTCAAGTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT

>AP018447|3|1|1357642-1360138|CRISPRCasFinder
ATTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TAAATAAAGGATTAGTAAATTTAGCAAACA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ATACTTCACAATCACATTGTAACTTAGCTT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AAAAAATTCCTCCAATGTGGAAAAACCTGT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ATATTGAAGTCACAGAAAAAGGGTTCAGAG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TGATTTTCTCTATGATTTCTACGATTTTTTT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TCGTAATCGAGGGACTCGAGCTTGATTCTGA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTCACTGATTTGGAGAATTGATTTGCTGCC
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	GGTATTCGGGGCGTTGTATGCGGCTGTCCT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	CTCTGGGCGAATTGAAAGAAATCCAATAAT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TCAAAATTGTGATCGAAAGACTCCAAGAAT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTTGAGTCCTTCGCCCCCATATATCCAAAC
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TCCGCTTTCACCGGGGACGATGTGTTTAAGT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AAGCTCATATCGCGGTAATCGTGGCAGTCAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ACCGGGGAATAAAACGCCCCTTGAGAGTTG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ACCGGGGAATAAAACGCCCCTTGAGAGTTG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AAAAGCCTAAAAGACTTTAAGCAAGCAAAACTA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ACAAGCAAGACACTTGCCACAGGGCATGGG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TACGACATCGGGGATTACGCCGAGGCCGAG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTCAGTATCCCATATATCCAAATATTTGAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ATTTTAGAGAGTGAAGTAACAGGCGAAAAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AAACGCTTATATATGGACAGAGGGAATAAC
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AGCTAAAAAAAATGGGGAGGTGGAAAAATGA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	CTAAAAGTGTTTGCATAAGATCTAAAAGCAAAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TAACTTCATTCTTTAAAAGAGGCAAACAAT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AGACATATTATGGACGAAAACAAGAAAAAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	CAATGACTTGCTTTTATTGTATCGTGAATCT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTAGCATAGTTTCATTAAATGCTTTTTGTGAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TGGTCTCCATTCATCATATGCAAGTGAAAGA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ATCCTCGCTATCGACATCAAAATCATAGGT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ATTCTGTTGCATAGAATACTGCCGCTGCTG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTTTTTTTTTTTTAACCCAAAGGAGTTTTTG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AAAAACGATTTTAAAATAGAGGAGTGCGAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTCTCTAGCCACTCATTGAGCGTTTTTTCAG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	GTGCCAGTTTTCCTCCAAGAAACAATTCCA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	GGAGCTAACGAGAAAATCAAGGAAAAAATCT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AAATCTCCTGTATCAGAAGCATGTTTGAAT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTATCATTTTTTTTTCGGAAATACCCGTCAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT

>AP018447|3|1|1357642-1360138|CRT
ATTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TAAATAAAGGATTAGTAAATTTAGCAAACA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ATACTTCACAATCACATTGTAACTTAGCTT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AAAAAATTCCTCCAATGTGGAAAAACCTGT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ATATTGAAGTCACAGAAAAAGGGTTCAGAG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TGATTTTCTCTATGATTTCTACGATTTTTTT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TCGTAATCGAGGGACTCGAGCTTGATTCTGA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTCACTGATTTGGAGAATTGATTTGCTGCC
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	GGTATTCGGGGCGTTGTATGCGGCTGTCCT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	CTCTGGGCGAATTGAAAGAAATCCAATAAT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TCAAAATTGTGATCGAAAGACTCCAAGAAT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTTGAGTCCTTCGCCCCCATATATCCAAAC
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TCCGCTTTCACCGGGGACGATGTGTTTAAGT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AAGCTCATATCGCGGTAATCGTGGCAGTCAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ACCGGGGAATAAAACGCCCCTTGAGAGTTG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ACCGGGGAATAAAACGCCCCTTGAGAGTTG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AAAAGCCTAAAAGACTTTAAGCAAGCAAAACTA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ACAAGCAAGACACTTGCCACAGGGCATGGG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TACGACATCGGGGATTACGCCGAGGCCGAG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTCAGTATCCCATATATCCAAATATTTGAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ATTTTAGAGAGTGAAGTAACAGGCGAAAAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AAACGCTTATATATGGACAGAGGGAATAAC
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AGCTAAAAAAAATGGGGAGGTGGAAAAATGA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	CTAAAAGTGTTTGCATAAGATCTAAAAGCAAAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TAACTTCATTCTTTAAAAGAGGCAAACAAT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AGACATATTATGGACGAAAACAAGAAAAAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	CAATGACTTGCTTTTATTGTATCGTGAATCT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTAGCATAGTTTCATTAAATGCTTTTTGTGAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TGGTCTCCATTCATCATATGCAAGTGAAAGA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ATCCTCGCTATCGACATCAAAATCATAGGT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ATTCTGTTGCATAGAATACTGCCGCTGCTG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTTTTTTTTTTTTAACCCAAAGGAGTTTTTG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AAAAACGATTTTAAAATAGAGGAGTGCGAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTCTCTAGCCACTCATTGAGCGTTTTTTCAG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	GTGCCAGTTTTCCTCCAAGAAACAATTCCA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	GGAGCTAACGAGAAAATCAAGGAAAAAATCT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AAATCTCCTGTATCAGAAGCATGTTTGAAT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTATCATTTTTTTTTCGGAAATACCCGTCAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT

>AP018447|3|3|1357840-1360138|PILER-CR
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ATATTGAAGTCACAGAAAAAGGGTTCAGAG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TGATTTTCTCTATGATTTCTACGATTTTTTT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TCGTAATCGAGGGACTCGAGCTTGATTCTGA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTCACTGATTTGGAGAATTGATTTGCTGCC
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	GGTATTCGGGGCGTTGTATGCGGCTGTCCT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	CTCTGGGCGAATTGAAAGAAATCCAATAAT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TCAAAATTGTGATCGAAAGACTCCAAGAAT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTTGAGTCCTTCGCCCCCATATATCCAAAC
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TCCGCTTTCACCGGGGACGATGTGTTTAAGT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AAGCTCATATCGCGGTAATCGTGGCAGTCAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ACCGGGGAATAAAACGCCCCTTGAGAGTTG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ACCGGGGAATAAAACGCCCCTTGAGAGTTG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AAAAGCCTAAAAGACTTTAAGCAAGCAAAACTA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ACAAGCAAGACACTTGCCACAGGGCATGGG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TACGACATCGGGGATTACGCCGAGGCCGAG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTCAGTATCCCATATATCCAAATATTTGAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ATTTTAGAGAGTGAAGTAACAGGCGAAAAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AAACGCTTATATATGGACAGAGGGAATAAC
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AGCTAAAAAAAATGGGGAGGTGGAAAAATGA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	CTAAAAGTGTTTGCATAAGATCTAAAAGCAAAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TAACTTCATTCTTTAAAAGAGGCAAACAAT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AGACATATTATGGACGAAAACAAGAAAAAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	CAATGACTTGCTTTTATTGTATCGTGAATCT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTAGCATAGTTTCATTAAATGCTTTTTGTGAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TGGTCTCCATTCATCATATGCAAGTGAAAGA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ATCCTCGCTATCGACATCAAAATCATAGGT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	ATTCTGTTGCATAGAATACTGCCGCTGCTG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTTTTTTTTTTTTAACCCAAAGGAGTTTTTG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AAAAACGATTTTAAAATAGAGGAGTGCGAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTCTCTAGCCACTCATTGAGCGTTTTTTCAG
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	GTGCCAGTTTTCCTCCAAGAAACAATTCCA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	GGAGCTAACGAGAAAATCAAGGAAAAAATCT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	AAATCTCCTGTATCAGAAGCATGTTTGAAT
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT	TTATCATTTTTTTTTCGGAAATACCCGTCAA
GTTTTAGTCCCTTCTTAAACTTCTATATGCTAGAAT

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Crispr_ID: AP018447_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP018447_4

1850477-1851771

Orphan

Consensus_repeat	Method
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	PILER-CR
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	CRISPRCasFinder
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	CRT

19 spacers

The CRISPR arrays of AP018447_4

>merge|AP018447|4|1850477-1851771|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACACCACTATTTCTCATATCGCGTGTAATCTTGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACTGTTTAAGGGCTAGATTCTACAAAGCTTTAGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACAAGATTTGCACAGAGTAAAGAGGCAAAGAGGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACTAAACTTCTCCCTATTGCGTGGTGTTTTTTGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACGGTAGATTCTGCGATGCACGAGCATATCAAGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACATGTGATATTGATGTAAGCAATCGTGGATTGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACACTTCACTTAGGTTGTTTGCAGCACCAGAGGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACACATTTTTATCGCAAATTCTGGAATCTCTTGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACTCGGTTGGCGGAATTGCTGGGGTGTGTAATGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACAACCGGCTCATCATAACTATACATTTTCTCGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACTTATAATGATTAAATTCTAGGCACAACGCCTGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACTCAAAATACCCCTTTGCCATATCCTCCCCAGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACCAATGTATTGCCCCCCCCCCCGTTAGAATCTGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACGTCCCCTGCATATATGCGTGGCGAGTGTATGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACAAAGCACATTCAAAATAATGCGTAAAGAATTGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACAGATTCTTTTACCAAAAGATAAATTTGTTGGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACTTTGGAAGCGTTGGTAAGCAATAATAATCCTGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACTATTTTTGTGCGTGGATTATACTTTAATATGTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACTCAATTTAGAGCTTGGCGGAAGCCTATTTGAGTTTTAGTGGGACCCGATTTAAGGGGATTTGTATCA

>AP018447|4|4|1850477-1851505|PILER-CR
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	ACCACTATTTCTCATATCGCGTGTAATCTT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TGTTTAAGGGCTAGATTCTACAAAGCTTTA
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	AAGATTTGCACAGAGTAAAGAGGCAAAGAG
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TAAACTTCTCCCTATTGCGTGGTGTTTTTT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	GGTAGATTCTGCGATGCACGAGCATATCAA
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	ATGTGATATTGATGTAAGCAATCGTGGATT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	ACTTCACTTAGGTTGTTTGCAGCACCAGAG
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	ACATTTTTATCGCAAATTCTGGAATCTCTT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TCGGTTGGCGGAATTGCTGGGGTGTGTAAT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	AACCGGCTCATCATAACTATACATTTTCTC
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TTATAATGATTAAATTCTAGGCACAACGCCT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TCAAAATACCCCTTTGCCATATCCTCCCCA
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	CAATGTATTGCCCCCCCCCCCGTTAGAATCT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	GTCCCCTGCATATATGCGTGGCGAGTGTAT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	AAAGCACATTCAAAATAATGCGTAAAGAATT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC

>AP018447|4|2|1850477-1851704|CRISPRCasFinder
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	ACCACTATTTCTCATATCGCGTGTAATCTT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TGTTTAAGGGCTAGATTCTACAAAGCTTTA
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	AAGATTTGCACAGAGTAAAGAGGCAAAGAG
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TAAACTTCTCCCTATTGCGTGGTGTTTTTT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	GGTAGATTCTGCGATGCACGAGCATATCAA
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	ATGTGATATTGATGTAAGCAATCGTGGATT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	ACTTCACTTAGGTTGTTTGCAGCACCAGAG
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	ACATTTTTATCGCAAATTCTGGAATCTCTT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TCGGTTGGCGGAATTGCTGGGGTGTGTAAT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	AACCGGCTCATCATAACTATACATTTTCTC
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TTATAATGATTAAATTCTAGGCACAACGCCT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TCAAAATACCCCTTTGCCATATCCTCCCCA
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	CAATGTATTGCCCCCCCCCCCGTTAGAATCT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	GTCCCCTGCATATATGCGTGGCGAGTGTAT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	AAAGCACATTCAAAATAATGCGTAAAGAATT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	AGATTCTTTTACCAAAAGATAAATTTGTTG
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TTTGGAAGCGTTGGTAAGCAATAATAATCCT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TATTTTTGTGCGTGGATTATACTTTAATAT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC

>AP018447|4|2|1850477-1851771|CRT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	ACCACTATTTCTCATATCGCGTGTAATCTT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TGTTTAAGGGCTAGATTCTACAAAGCTTTA
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	AAGATTTGCACAGAGTAAAGAGGCAAAGAG
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TAAACTTCTCCCTATTGCGTGGTGTTTTTT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	GGTAGATTCTGCGATGCACGAGCATATCAA
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	ATGTGATATTGATGTAAGCAATCGTGGATT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	ACTTCACTTAGGTTGTTTGCAGCACCAGAG
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	ACATTTTTATCGCAAATTCTGGAATCTCTT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TCGGTTGGCGGAATTGCTGGGGTGTGTAAT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	AACCGGCTCATCATAACTATACATTTTCTC
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TTATAATGATTAAATTCTAGGCACAACGCCT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TCAAAATACCCCTTTGCCATATCCTCCCCA
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	CAATGTATTGCCCCCCCCCCCGTTAGAATCT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	GTCCCCTGCATATATGCGTGGCGAGTGTAT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	AAAGCACATTCAAAATAATGCGTAAAGAATT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	AGATTCTTTTACCAAAAGATAAATTTGTTG
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TTTGGAAGCGTTGGTAAGCAATAATAATCCT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TATTTTTGTGCGTGGATTATACTTTAATAT
GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAAC	TCAATTTAGAGCTTGGCGGAAGCCTATTTGA
GTTTTAGTGGGACCCGATTTAAGGGGATTTGTATCA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
AP018447_3	3.13\|1358473\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358473-1358503	31	AP018447.1	737655-737685	0	1.0
AP018447_3	3.23\|1359138\|33\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359138-1359170	33	AP018447.1	1070739-1070771	0	1.0
AP018447_3	3.26\|1359339\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359339-1359369	31	AP018447.1	198305-198335	0	1.0
AP018447_3	3.27\|1359406\|32\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359406-1359437	32	AP018447.1	885848-885879	0	1.0
AP018447_3	3.37\|1360072\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1360072-1360102	31	AP018447.1	1590447-1590477	0	1.0
AP018447_4	4.1\|1850513\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1850513-1850542	30	AP018447.1	967621-967650	0	1.0
AP018447_4	4.2\|1850579\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1850579-1850608	30	AP018447.1	2004917-2004946	0	1.0
AP018447_4	4.3\|1850645\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1850645-1850674	30	AP018447.1	32349-32378	0	1.0
AP018447_4	4.4\|1850711\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1850711-1850740	30	AP018447.1	961434-961463	0	1.0
AP018447_4	4.5\|1850777\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1850777-1850806	30	AP018447.1	1797978-1798007	0	1.0
AP018447_4	4.6\|1850843\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1850843-1850872	30	AP018447.1	2010769-2010798	0	1.0
AP018447_4	4.7\|1850909\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1850909-1850938	30	AP018447.1	1076847-1076876	0	1.0
AP018447_4	4.8\|1850975\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1850975-1851004	30	AP018447.1	2079635-2079664	0	1.0
AP018447_4	4.9\|1851041\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851041-1851070	30	AP018447.1	1207512-1207541	0	1.0
AP018447_4	4.10\|1851107\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851107-1851136	30	AP018447.1	684249-684278	0	1.0
AP018447_4	4.11\|1851173\|31\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851173-1851203	31	AP018447.1	1125096-1125126	0	1.0
AP018447_4	4.12\|1851240\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851240-1851269	30	AP018447.1	70010-70039	0	1.0
AP018447_4	4.13\|1851306\|31\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851306-1851336	31	AP018447.1	1746631-1746661	0	1.0
AP018447_4	4.14\|1851373\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851373-1851402	30	AP018447.1	539419-539448	0	1.0
AP018447_4	4.16\|1851506\|30\|AP018447\|CRISPRCasFinder,CRT	1851506-1851535	30	AP018447.1	2149560-2149589	0	1.0
AP018447_4	4.17\|1851572\|31\|AP018447\|CRISPRCasFinder,CRT	1851572-1851602	31	AP018447.1	856283-856313	0	1.0
AP018447_4	4.18\|1851639\|30\|AP018447\|CRISPRCasFinder,CRT	1851639-1851668	30	AP018447.1	1385277-1385306	0	1.0
AP018447_4	4.19\|1851705\|31\|AP018447\|CRT	1851705-1851735	31	AP018447.1	1627689-1627719	0	1.0
AP018447_3	3.16\|1358672\|33\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358672-1358704	33	AP018447.1	1713543-1713575	1	0.97

1. spacer 3.13|1358473|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to position: 737655-737685, mismatch: 0, identity: 1.0

aagctcatatcgcggtaatcgtggcagtcaa	CRISPR spacer
aagctcatatcgcggtaatcgtggcagtcaa	Protospacer
*******************************

2. spacer 3.23|1359138|33|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to position: 1070739-1070771, mismatch: 0, identity: 1.0

ctaaaagtgtttgcataagatctaaaagcaaaa	CRISPR spacer
ctaaaagtgtttgcataagatctaaaagcaaaa	Protospacer
*********************************

3. spacer 3.26|1359339|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to position: 198305-198335, mismatch: 0, identity: 1.0

caatgacttgcttttattgtatcgtgaatct	CRISPR spacer
caatgacttgcttttattgtatcgtgaatct	Protospacer
*******************************

4. spacer 3.27|1359406|32|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to position: 885848-885879, mismatch: 0, identity: 1.0

ttagcatagtttcattaaatgctttttgtgaa	CRISPR spacer
ttagcatagtttcattaaatgctttttgtgaa	Protospacer
********************************

5. spacer 3.37|1360072|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to position: 1590447-1590477, mismatch: 0, identity: 1.0

ttatcatttttttttcggaaatacccgtcaa	CRISPR spacer
ttatcatttttttttcggaaatacccgtcaa	Protospacer
*******************************

6. spacer 4.1|1850513|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to position: 967621-967650, mismatch: 0, identity: 1.0

accactatttctcatatcgcgtgtaatctt	CRISPR spacer
accactatttctcatatcgcgtgtaatctt	Protospacer
******************************

7. spacer 4.2|1850579|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to position: 2004917-2004946, mismatch: 0, identity: 1.0

tgtttaagggctagattctacaaagcttta	CRISPR spacer
tgtttaagggctagattctacaaagcttta	Protospacer
******************************

8. spacer 4.3|1850645|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to position: 32349-32378, mismatch: 0, identity: 1.0

aagatttgcacagagtaaagaggcaaagag	CRISPR spacer
aagatttgcacagagtaaagaggcaaagag	Protospacer
******************************

9. spacer 4.4|1850711|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to position: 961434-961463, mismatch: 0, identity: 1.0

taaacttctccctattgcgtggtgtttttt	CRISPR spacer
taaacttctccctattgcgtggtgtttttt	Protospacer
******************************

10. spacer 4.5|1850777|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to position: 1797978-1798007, mismatch: 0, identity: 1.0

ggtagattctgcgatgcacgagcatatcaa	CRISPR spacer
ggtagattctgcgatgcacgagcatatcaa	Protospacer
******************************

11. spacer 4.6|1850843|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to position: 2010769-2010798, mismatch: 0, identity: 1.0

atgtgatattgatgtaagcaatcgtggatt	CRISPR spacer
atgtgatattgatgtaagcaatcgtggatt	Protospacer
******************************

12. spacer 4.7|1850909|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to position: 1076847-1076876, mismatch: 0, identity: 1.0

acttcacttaggttgtttgcagcaccagag	CRISPR spacer
acttcacttaggttgtttgcagcaccagag	Protospacer
******************************

13. spacer 4.8|1850975|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to position: 2079635-2079664, mismatch: 0, identity: 1.0

acatttttatcgcaaattctggaatctctt	CRISPR spacer
acatttttatcgcaaattctggaatctctt	Protospacer
******************************

14. spacer 4.9|1851041|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to position: 1207512-1207541, mismatch: 0, identity: 1.0

tcggttggcggaattgctggggtgtgtaat	CRISPR spacer
tcggttggcggaattgctggggtgtgtaat	Protospacer
******************************

15. spacer 4.10|1851107|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to position: 684249-684278, mismatch: 0, identity: 1.0

aaccggctcatcataactatacattttctc	CRISPR spacer
aaccggctcatcataactatacattttctc	Protospacer
******************************

16. spacer 4.11|1851173|31|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to position: 1125096-1125126, mismatch: 0, identity: 1.0

ttataatgattaaattctaggcacaacgcct	CRISPR spacer
ttataatgattaaattctaggcacaacgcct	Protospacer
*******************************

17. spacer 4.12|1851240|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to position: 70010-70039, mismatch: 0, identity: 1.0

tcaaaatacccctttgccatatcctcccca	CRISPR spacer
tcaaaatacccctttgccatatcctcccca	Protospacer
******************************

18. spacer 4.13|1851306|31|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to position: 1746631-1746661, mismatch: 0, identity: 1.0

caatgtattgcccccccccccgttagaatct	CRISPR spacer
caatgtattgcccccccccccgttagaatct	Protospacer
*******************************

19. spacer 4.14|1851373|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to position: 539419-539448, mismatch: 0, identity: 1.0

gtcccctgcatatatgcgtggcgagtgtat	CRISPR spacer
gtcccctgcatatatgcgtggcgagtgtat	Protospacer
******************************

20. spacer 4.16|1851506|30|AP018447|CRISPRCasFinder,CRT matches to position: 2149560-2149589, mismatch: 0, identity: 1.0

agattcttttaccaaaagataaatttgttg	CRISPR spacer
agattcttttaccaaaagataaatttgttg	Protospacer
******************************

21. spacer 4.17|1851572|31|AP018447|CRISPRCasFinder,CRT matches to position: 856283-856313, mismatch: 0, identity: 1.0

tttggaagcgttggtaagcaataataatcct	CRISPR spacer
tttggaagcgttggtaagcaataataatcct	Protospacer
*******************************

22. spacer 4.18|1851639|30|AP018447|CRISPRCasFinder,CRT matches to position: 1385277-1385306, mismatch: 0, identity: 1.0

tatttttgtgcgtggattatactttaatat	CRISPR spacer
tatttttgtgcgtggattatactttaatat	Protospacer
******************************

23. spacer 4.19|1851705|31|AP018447|CRT matches to position: 1627689-1627719, mismatch: 0, identity: 1.0

tcaatttagagcttggcggaagcctatttga	CRISPR spacer
tcaatttagagcttggcggaagcctatttga	Protospacer
*******************************

24. spacer 3.16|1358672|33|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to position: 1713543-1713575, mismatch: 1, identity: 0.97

aaaagcctaaaagactttaagcaagcaaaacta	CRISPR spacer
aaaagcctaaaagactttaagtaagcaaaacta	Protospacer
*********************.***********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
AP018447_3	3.19\|1358873\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358873-1358902	30	MG945779	UNVERIFIED: Microviridae sp. isolate 4059-1602, complete genome	4534-4563	2	0.933
AP018447_3	3.20\|1358939\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358939-1358968	30	NZ_CP038619	Arsenophonus nasoniae strain FIN plasmid pArsFIN7, complete sequence	82692-82721	4	0.867
AP018447_3	3.1\|1357678\|30\|AP018447\|CRISPRCasFinder,CRT	1357678-1357707	30	AJ748296	Sulfolobus islandicus rudivirus 1 variant XX, complete genome	15640-15669	5	0.833
AP018447_3	3.1\|1357678\|30\|AP018447\|CRISPRCasFinder,CRT	1357678-1357707	30	AJ414696	Sulfolobus virus SIRV-1 complete viral genome	15400-15429	5	0.833
AP018447_3	3.8\|1358142\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358142-1358171	30	MN311492	Antarctic microvirus TYR_006_V_25, complete genome	887-916	5	0.833
AP018447_3	3.17\|1358741\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358741-1358770	30	MH617416	Microviridae sp. isolate cthh905, complete genome	1559-1588	5	0.833
AP018447_3	3.22\|1359071\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359071-1359101	31	GU943063	Uncultured phage MedDCM-OCT-S05-C139 genomic sequence	2596-2626	5	0.839
AP018447_3	3.1\|1357678\|30\|AP018447\|CRISPRCasFinder,CRT	1357678-1357707	30	NZ_AP014825	Geminocystis sp. NIES-3709 plasmid pGM3709_04, complete sequence	17048-17077	6	0.8
AP018447_3	3.1\|1357678\|30\|AP018447\|CRISPRCasFinder,CRT	1357678-1357707	30	MK448904	Streptococcus phage Javan316, complete genome	27719-27748	6	0.8
AP018447_3	3.8\|1358142\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358142-1358171	30	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	698115-698144	6	0.8
AP018447_3	3.8\|1358142\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358142-1358171	30	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	698146-698175	6	0.8
AP018447_3	3.8\|1358142\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358142-1358171	30	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	353850-353879	6	0.8
AP018447_3	3.8\|1358142\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358142-1358171	30	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	697966-697995	6	0.8
AP018447_3	3.8\|1358142\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358142-1358171	30	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	697944-697973	6	0.8
AP018447_3	3.8\|1358142\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358142-1358171	30	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1490326-1490355	6	0.8
AP018447_3	3.8\|1358142\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358142-1358171	30	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1475883-1475912	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	NZ_CP045758	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669, complete sequence	47166-47195	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	NZ_CP045760	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 plasmid pCFSAN000661, complete sequence	14847-14876	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	NZ_CP045755	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 plasmid p1CFSAN000752, complete sequence	66201-66230	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	NZ_CP039470	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001112 plasmid pCFSAN001112, complete sequence	24831-24860	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	NZ_CP039485	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000952 plasmid pCFSAN000952, complete sequence	29360-29389	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	NZ_CP039494	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_1, complete sequence	34374-34403	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	NZ_CP039466	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001118 plasmid pCFSAN001118, complete sequence	42014-42043	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	NZ_CP039468	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001115 plasmid pCFSAN001115, complete sequence	34373-34402	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	NZ_CP039464	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001140 plasmid pCFSAN001140, complete sequence	52492-52521	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	NZ_CP039472	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000970 plasmid pCFSAN000970, complete sequence	52461-52490	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	NZ_CP039474	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000968 plasmid pCFSAN000968_1, complete sequence	74094-74123	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	NZ_CP039492	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000700 plasmid pCFSAN000700, complete sequence	34374-34403	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	NZ_CP039483	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000954 plasmid pCFSAN000954, complete sequence	34373-34402	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	NZ_CP039479	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000960 plasmid pCFSAN000960, complete sequence	69358-69387	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	CP039501	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 plasmid pCFSAN000189, complete sequence	19383-19412	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	NZ_CP034178	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 plasmid unnamed, complete sequence	69231-69260	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	NZ_CP039481	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000958 plasmid pCFSAN000958, complete sequence	34372-34401	6	0.8
AP018447_3	3.25\|1359273\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359273-1359302	30	NZ_CP039488	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000753 plasmid pCFSAN000753, complete sequence	69406-69435	6	0.8
AP018447_3	3.28\|1359474\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359474-1359504	31	KF030445	Escherichia phage 1720a-02, complete genome	4626-4656	6	0.806
AP018447_4	4.12\|1851240\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851240-1851269	30	DQ222855	Bacillus anthracis phage Gamma isolate 53, complete genome	36004-36033	6	0.8
AP018447_4	4.12\|1851240\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851240-1851269	30	DQ289555	Bacillus anthracis phage W Beta, complete genome	38804-38833	6	0.8
AP018447_4	4.12\|1851240\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851240-1851269	30	NC_007814	Bacillus phage Fah, complete genome	35902-35931	6	0.8
AP018447_4	4.12\|1851240\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851240-1851269	30	DQ150593	Bacillus anthracis bacteriophage Fah, complete sequence	35902-35931	6	0.8
AP018447_4	4.12\|1851240\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851240-1851269	30	DQ222853	Bacillus anthracis phage Gamma isolate 51, complete genome	35181-35210	6	0.8
AP018447_4	4.12\|1851240\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851240-1851269	30	DQ221100	Bacteriophage gamma putative terminase small subunit, putative terminase large subunit, putative portal protein, putative prohead protease, putative phage structural protein, putative DNA packaging protein, putative head-tail adaptor, phage related proteins, putative major tail protein, phage related protein, putative tail tape measure protein, phage related protein, putative minor structural protein, putative holin, N-acetylmuramoyl-L-alanine amidase (PlyG), putative lipoprotein, putative transcriptional regulator, conserved hypothetical proteins, FtsK/SpoIIIE family protein, phage related protein, conserved hypothetical protein, putative transcriptional regulator, putative site-specific recombinase, conserved hypothetical protein, putative transcriptional regulators, putative antirepressor, conserved hypothetical protein, putative DNA replication proteins, conserved hypothetical protein, phage related proteins, conserved hypothetical protein, putative transglycosylase, and putative endonuclease genes, complete cds	34011-34040	6	0.8
AP018447_4	4.12\|1851240\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851240-1851269	30	DQ222851	Bacillus anthracis phage Cherry, complete genome	34543-34572	6	0.8
AP018447_4	4.12\|1851240\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851240-1851269	30	DQ289556	Bacillus anthracis phage Gamma isolate d'Herelle, complete genome	35310-35339	6	0.8
AP018447_4	4.12\|1851240\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851240-1851269	30	NC_007734	Bacillus phage WBeta, complete genome	38804-38833	6	0.8
AP018447_4	4.12\|1851240\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851240-1851269	30	NC_007458	Bacillus phage Gamma, complete genome	35181-35210	6	0.8
AP018447_4	4.14\|1851373\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851373-1851402	30	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	105256-105285	6	0.8
AP018447_4	4.16\|1851506\|30\|AP018447\|CRISPRCasFinder,CRT	1851506-1851535	30	MN694303	Marine virus AFVG_250M806, complete genome	46633-46662	6	0.8
AP018447_4	4.19\|1851705\|31\|AP018447\|CRT	1851705-1851735	31	NZ_CP016381	Aeromonas hydrophila strain AHNIH1 plasmid pASP-135, complete sequence	77424-77454	6	0.806
AP018447_3	3.1\|1357678\|30\|AP018447\|CRISPRCasFinder,CRT	1357678-1357707	30	NZ_CP034095	Acinetobacter baumannii strain A52 plasmid pA52-3, complete sequence	587-616	7	0.767
AP018447_3	3.4\|1357876\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1357876-1357905	30	KJ018210	Flavobacterium sp. phage 1/32, complete genome	33361-33390	7	0.767
AP018447_3	3.4\|1357876\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1357876-1357905	30	AP014317	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C52, * SEQUENCING IN PROGRESS *	10107-10136	7	0.767
AP018447_3	3.5\|1357942\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1357942-1357972	31	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	28271-28301	7	0.774
AP018447_3	3.5\|1357942\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1357942-1357972	31	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	22525-22555	7	0.774
AP018447_3	3.5\|1357942\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1357942-1357972	31	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	93699-93729	7	0.774
AP018447_3	3.5\|1357942\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1357942-1357972	31	LN681537	Clostridium phage phiCD211, complete genome	102561-102591	7	0.774
AP018447_3	3.8\|1358142\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358142-1358171	30	MH617249	Microviridae sp. isolate ctba67, complete genome	932-961	7	0.767
AP018447_3	3.8\|1358142\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358142-1358171	30	MH617398	Microviridae sp. isolate ctbg66, complete genome	959-988	7	0.767
AP018447_3	3.17\|1358741\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358741-1358770	30	MK496700	Capybara microvirus Cap1_SP_92, complete genome	4331-4360	7	0.767
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NZ_CP050105	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence	509095-509124	7	0.767
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NZ_CP025014	Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence	410817-410846	7	0.767
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NZ_CP049732	Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence	462565-462594	7	0.767
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NZ_CP013525	Rhizobium phaseoli strain R744 plasmid pRphaR744c, complete sequence	284510-284539	7	0.767
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NZ_CP025508	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence	417709-417738	7	0.767
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NZ_CP050110	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence	509097-509126	7	0.767
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NZ_CP048282	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248d, complete sequence	369012-369041	7	0.767
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NZ_CP030764	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence	350439-350468	7	0.767
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NC_010998	Rhizobium etli CIAT 652 plasmid pA, complete sequence	290684-290713	7	0.767
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NZ_CP054033	Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence	241343-241372	7	0.767
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NZ_CP053208	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence	426786-426815	7	0.767
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NZ_CP050087	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence	416493-416522	7	0.767
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NZ_CP021033	Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence	684888-684917	7	0.767
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NZ_CP018230	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence	63052-63081	7	0.767
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	1144023-1144052	7	0.767
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	1089450-1089479	7	0.767
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NZ_CP022667	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence	219865-219894	7	0.767
AP018447_3	3.19\|1358873\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358873-1358902	30	NC_001884	Bacillus phage SPBc2, complete genome	20443-20472	7	0.767
AP018447_3	3.19\|1358873\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358873-1358902	30	AF020713	Bacteriophage SPBc2 complete genome	20443-20472	7	0.767
AP018447_3	3.19\|1358873\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358873-1358902	30	MT366946	Bacillus phage Hyb1phi3Ts-SPbeta, complete genome	12531-12560	7	0.767
AP018447_3	3.20\|1358939\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358939-1358968	30	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	345739-345768	7	0.767
AP018447_3	3.20\|1358939\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358939-1358968	30	NZ_CP007513	Bacillus bombysepticus plasmid pBb, complete genome	44950-44979	7	0.767
AP018447_3	3.20\|1358939\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358939-1358968	30	NZ_AP014865	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence	336764-336793	7	0.767
AP018447_3	3.20\|1358939\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358939-1358968	30	NZ_CP023246	Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence	445218-445247	7	0.767
AP018447_3	3.20\|1358939\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358939-1358968	30	NC_049931	Enterococcus phage vB_EfaP_IME199, complete genome	12017-12046	7	0.767
AP018447_3	3.23\|1359138\|33\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359138-1359170	33	MN693919	Marine virus AFVG_250M503, complete genome	14130-14162	7	0.788
AP018447_3	3.23\|1359138\|33\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359138-1359170	33	MN694478	Marine virus AFVG_250M504, complete genome	22030-22062	7	0.788
AP018447_3	3.23\|1359138\|33\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359138-1359170	33	MN694270	Marine virus AFVG_250M505, complete genome	22147-22179	7	0.788
AP018447_3	3.23\|1359138\|33\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359138-1359170	33	MN694656	Marine virus AFVG_250M501, complete genome	21760-21792	7	0.788
AP018447_3	3.37\|1360072\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1360072-1360102	31	NC_017257	Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) plasmid pLeu, complete sequence	672-702	7	0.774
AP018447_3	3.37\|1360072\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1360072-1360102	31	NZ_CP041297	Acinetobacter indicus strain 80-1-2 plasmid p80-1-2-tetX3, complete sequence	11649-11679	7	0.774
AP018447_4	4.8\|1850975\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1850975-1851004	30	CP017693	Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence	3358-3387	7	0.767
AP018447_4	4.8\|1850975\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1850975-1851004	30	CP017693	Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence	37222-37251	7	0.767
AP018447_4	4.9\|1851041\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851041-1851070	30	NZ_CP030204	Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence	19747-19776	7	0.767
AP018447_4	4.16\|1851506\|30\|AP018447\|CRISPRCasFinder,CRT	1851506-1851535	30	MT074137	Bacteroides phage DAC16, complete genome	67894-67923	7	0.767
AP018447_4	4.16\|1851506\|30\|AP018447\|CRISPRCasFinder,CRT	1851506-1851535	30	MT074142	Bacteroides phage DAC23, complete genome	69015-69044	7	0.767
AP018447_4	4.16\|1851506\|30\|AP018447\|CRISPRCasFinder,CRT	1851506-1851535	30	MT074141	Bacteroides phage DAC22, complete genome	72182-72211	7	0.767
AP018447_4	4.16\|1851506\|30\|AP018447\|CRISPRCasFinder,CRT	1851506-1851535	30	MT074139	Bacteroides phage DAC19, complete genome	71951-71980	7	0.767
AP018447_4	4.16\|1851506\|30\|AP018447\|CRISPRCasFinder,CRT	1851506-1851535	30	MT074140	Bacteroides phage DAC20, complete genome	71951-71980	7	0.767
AP018447_4	4.16\|1851506\|30\|AP018447\|CRISPRCasFinder,CRT	1851506-1851535	30	NZ_CP020859	Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence	57257-57286	7	0.767
AP018447_4	4.16\|1851506\|30\|AP018447\|CRISPRCasFinder,CRT	1851506-1851535	30	NC_007930	Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence	146041-146070	7	0.767
AP018447_4	4.16\|1851506\|30\|AP018447\|CRISPRCasFinder,CRT	1851506-1851535	30	NZ_LT604075	Lactobacillus salivarius isolate LPM01 plasmid II	58423-58452	7	0.767
AP018447_4	4.16\|1851506\|30\|AP018447\|CRISPRCasFinder,CRT	1851506-1851535	30	CP002037	Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence	146269-146298	7	0.767
AP018447_3	3.2\|1357744\|30\|AP018447\|CRISPRCasFinder,CRT	1357744-1357773	30	NZ_CP050314	Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence	224431-224460	8	0.733
AP018447_3	3.18\|1358807\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358807-1358836	30	NZ_CP050082	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence	529797-529826	8	0.733
AP018447_3	3.22\|1359071\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359071-1359101	31	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	1651027-1651057	8	0.742
AP018447_3	3.24\|1359207\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359207-1359236	30	NZ_CP020745	Bacillus mycoides strain Gnyt1 plasmid unnamed2, complete sequence	11302-11331	8	0.733
AP018447_3	3.24\|1359207\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359207-1359236	30	NZ_CP024658	Bacillus cereus strain MLY1 plasmid pMLY1.3, complete sequence	106718-106747	8	0.733
AP018447_3	3.28\|1359474\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359474-1359504	31	NZ_CP024940	Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence	1209263-1209293	8	0.742
AP018447_3	3.29\|1359541\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359541-1359570	30	NZ_CP048281	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence	441441-441470	8	0.733
AP018447_3	3.35\|1359939\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359939-1359969	31	NZ_CP053838	Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence	118700-118730	8	0.742
AP018447_3	3.37\|1360072\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1360072-1360102	31	NZ_LR699116	Aquicella lusitana strain SGT-39 plasmid 3	89046-89076	8	0.742
AP018447_4	4.5\|1850777\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1850777-1850806	30	NZ_CP025548	Mycobacterium paragordonae strain 49061 plasmid unnamed2, complete sequence	12507-12536	8	0.733
AP018447_4	4.9\|1851041\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1851041-1851070	30	NC_019331	Arthrobacter sp. J3-40 plasmid pJ340-114, complete sequence	2274-2303	8	0.733
AP018447_4	4.16\|1851506\|30\|AP018447\|CRISPRCasFinder,CRT	1851506-1851535	30	MH622943	Myoviridae sp. isolate ctbc_4, complete genome	137982-138011	8	0.733
AP018447_4	4.16\|1851506\|30\|AP018447\|CRISPRCasFinder,CRT	1851506-1851535	30	MF360958	Salicola phage SCTP-2, complete genome	103037-103066	8	0.733
AP018447_4	4.18\|1851639\|30\|AP018447\|CRISPRCasFinder,CRT	1851639-1851668	30	MK097141	Vibrio phage P23, complete genome	2114-2143	8	0.733
AP018447_4	4.18\|1851639\|30\|AP018447\|CRISPRCasFinder,CRT	1851639-1851668	30	NZ_CP017255	Clostridium taeniosporum strain 1/k plasmid pCt2, complete sequence	11121-11150	8	0.733
AP018447_3	3.3\|1357810\|30\|AP018447\|CRISPRCasFinder,CRT	1357810-1357839	30	NZ_CP009062	Borreliella afzelii K78 plasmid lp28-1, complete sequence	21132-21161	9	0.7
AP018447_3	3.3\|1357810\|30\|AP018447\|CRISPRCasFinder,CRT	1357810-1357839	30	NZ_CP028879	Borreliella bavariensis PBi plasmid lp28-9, complete sequence	7278-7307	9	0.7
AP018447_3	3.7\|1358076\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358076-1358105	30	LT986678	Poophage MBI-2016a genome assembly, complete genome: monopartite	1263-1292	9	0.7
AP018447_3	3.8\|1358142\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358142-1358171	30	NZ_CP045296	Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence	717725-717754	9	0.7
AP018447_3	3.17\|1358741\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358741-1358770	30	NZ_CP017783	Rhodobacter sp. LPB0142 plasmid pEJ02, complete sequence	3750-3779	9	0.7
AP018447_3	3.17\|1358741\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1358741-1358770	30	NZ_CP017784	Rhodobacter sp. LPB0142 plasmid pEJ03, complete sequence	1271-1300	9	0.7
AP018447_3	3.27\|1359406\|32\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359406-1359437	32	MG945362	UNVERIFIED: Microviridae sp. isolate 3122-1711, complete genome	4065-4096	9	0.719
AP018447_3	3.31\|1359673\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359673-1359703	31	NZ_AP019726	Bacteroides uniformis strain NBRC 113350 plasmid pBUN2, complete sequence	50752-50782	9	0.71
AP018447_3	3.32\|1359740\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359740-1359769	30	MG945828	UNVERIFIED: Microviridae sp. isolate 9000-1602, complete genome	2692-2721	9	0.7
AP018447_3	3.35\|1359939\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359939-1359969	31	NC_048170	Escherichia phage vB_EcoM_Goslar, complete genome	76256-76286	9	0.71
AP018447_3	3.35\|1359939\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359939-1359969	31	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	267017-267047	9	0.71
AP018447_3	3.36\|1360006\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1360006-1360035	30	NZ_CP039329	Citrobacter portucalensis strain Effluent_1 plasmid unnamed2, complete sequence	22991-23020	9	0.7
AP018447_3	3.36\|1360006\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1360006-1360035	30	NZ_CP034132	Klebsiella quasipneumoniae strain G4584 plasmid pG4584_81.9Kb, complete sequence	12304-12333	9	0.7
AP018447_3	3.36\|1360006\|30\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1360006-1360035	30	NZ_CP034140	Klebsiella quasipneumoniae subsp. similipneumoniae strain G747 plasmid pG747_84.1Kb, complete sequence	12302-12331	9	0.7
AP018447_4	4.3\|1850645\|30\|AP018447\|PILER-CR,CRISPRCasFinder,CRT	1850645-1850674	30	MH552571	Microviridae sp. isolate ctgh214, complete genome	1614-1643	9	0.7
AP018447_4	4.16\|1851506\|30\|AP018447\|CRISPRCasFinder,CRT	1851506-1851535	30	NZ_CP020429	Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence	193135-193164	9	0.7
AP018447_4	4.16\|1851506\|30\|AP018447\|CRISPRCasFinder,CRT	1851506-1851535	30	MN480763	Streptococcus salivarius strain YU10 plasmid pSsal-YU10, complete sequence	26109-26138	9	0.7
AP018447_4	4.16\|1851506\|30\|AP018447\|CRISPRCasFinder,CRT	1851506-1851535	30	NZ_CP020439	Streptococcus equinus strain FDAARGOS_251 plasmid unamed1 sequence	77063-77092	9	0.7
AP018447_1	1.1\|148378\|32\|AP018447\|PILER-CR	148378-148409	32	NC_014628	Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence	386096-386127	10	0.688
AP018447_1	1.1\|148378\|32\|AP018447\|PILER-CR	148378-148409	32	HG531805	Clostridium phage CDMH1 complete genome	38487-38518	10	0.688
AP018447_2	2.1\|544182\|32\|AP018447\|PILER-CR	544182-544213	32	NC_014628	Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence	386096-386127	10	0.688
AP018447_2	2.1\|544182\|32\|AP018447\|PILER-CR	544182-544213	32	HG531805	Clostridium phage CDMH1 complete genome	38487-38518	10	0.688
AP018447_3	3.23\|1359138\|33\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359138-1359170	33	GU943056	Uncultured phage MedDCM-OCT-S04-C348 genomic sequence	14773-14805	10	0.697
AP018447_3	3.27\|1359406\|32\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359406-1359437	32	NZ_CP012101	Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence	189101-189132	10	0.688
AP018447_3	3.27\|1359406\|32\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1359406-1359437	32	NZ_CP006906	Clostridium baratii str. Sullivan plasmid pCBJ, complete sequence	52854-52885	10	0.688
AP018447_3	3.37\|1360072\|31\|AP018447\|CRISPRCasFinder,CRT,PILER-CR	1360072-1360102	31	NZ_CP031103	Leclercia sp. W17 plasmid pW17-2, complete sequence	21538-21568	10	0.677

1. spacer 3.19|1358873|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to MG945779 (UNVERIFIED: Microviridae sp. isolate 4059-1602, complete genome) position: , mismatch: 2, identity: 0.933

ttcagtatcccatatatccaaatatttgaa	CRISPR spacer
ttcagtatcccatatatccagatatgtgaa	Protospacer
********************.**** ****

2. spacer 3.20|1358939|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038619 (Arsenophonus nasoniae strain FIN plasmid pArsFIN7, complete sequence) position: , mismatch: 4, identity: 0.867

-attttagagagtgaagtaacaggcgaaaaa	CRISPR spacer
cattata-agagtgaaaaaacaggcgaaaaa	Protospacer
 *** ** ********. *************

3. spacer 3.1|1357678|30|AP018447|CRISPRCasFinder,CRT matches to AJ748296 (Sulfolobus islandicus rudivirus 1 variant XX, complete genome) position: , mismatch: 5, identity: 0.833

taaataaaggattagtaaatttagcaaaca	CRISPR spacer
aaaataaagaattagtaaaattagcaagaa	Protospacer
 ********.********* *******. *

4. spacer 3.1|1357678|30|AP018447|CRISPRCasFinder,CRT matches to AJ414696 (Sulfolobus virus SIRV-1 complete viral genome) position: , mismatch: 5, identity: 0.833

taaataaaggattagtaaatttagcaaaca	CRISPR spacer
aaaataaagaattagtaaaattagcaagaa	Protospacer
 ********.********* *******. *

5. spacer 3.8|1358142|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to MN311492 (Antarctic microvirus TYR_006_V_25, complete genome) position: , mismatch: 5, identity: 0.833

ggtattcggggcgttgtatgcggctgtcct	CRISPR spacer
tgtattcggggcgttgtagtcggctgtctg	Protospacer
 *****************  ********.

6. spacer 3.17|1358741|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to MH617416 (Microviridae sp. isolate cthh905, complete genome) position: , mismatch: 5, identity: 0.833

acaagcaagacacttgccacagggcatggg	CRISPR spacer
acaagcaggacacttgccacatggtacagg	Protospacer
*******.************* **.*..**

7. spacer 3.22|1359071|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to GU943063 (Uncultured phage MedDCM-OCT-S05-C139 genomic sequence) position: , mismatch: 5, identity: 0.839

agctaa--aaaaaatggggaggtggaaaaatga	CRISPR spacer
--ttaaataaaaaatggggaggaggataaatga	Protospacer
  .***  ************** *** ******

8. spacer 3.1|1357678|30|AP018447|CRISPRCasFinder,CRT matches to NZ_AP014825 (Geminocystis sp. NIES-3709 plasmid pGM3709_04, complete sequence) position: , mismatch: 6, identity: 0.8

taaataaaggattagtaaatttagcaaaca	CRISPR spacer
caaaaaaagaattagtaaatttagcattaa	Protospacer
.*** ****.****************   *

9. spacer 3.1|1357678|30|AP018447|CRISPRCasFinder,CRT matches to MK448904 (Streptococcus phage Javan316, complete genome) position: , mismatch: 6, identity: 0.8

taaataaaggattagtaaatttagcaaaca	CRISPR spacer
ccactcaaggatttgtaaattcagcaaaca	Protospacer
. * * ******* *******.********

10. spacer 3.8|1358142|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ggtattcggggcgttgtatgcggctgtcct	CRISPR spacer
ttctttcggggcgttgcatgcgcctgtcct	Protospacer
  . ************.***** *******

11. spacer 3.8|1358142|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ggtattcggggcgttgtatgcggctgtcct	CRISPR spacer
ttctttcggggcgttgcatgcgcctgtcct	Protospacer
  . ************.***** *******

12. spacer 3.8|1358142|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ggtattcggggcgttgtatgcggctgtcct	CRISPR spacer
ttctttcggggcgttgcatgcgcctgtcct	Protospacer
  . ************.***** *******

13. spacer 3.8|1358142|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 6, identity: 0.8

ggtattcggggcgttgtatgcggctgtcct	CRISPR spacer
ttctttcggggcgttgcatgcgcctgtcct	Protospacer
  . ************.***** *******

14. spacer 3.8|1358142|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ggtattcggggcgttgtatgcggctgtcct	CRISPR spacer
ttctttcggggcgttgcatgcgcctgtcct	Protospacer
  . ************.***** *******

15. spacer 3.8|1358142|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ggtattcggggcgttgtatgcggctgtcct	CRISPR spacer
ttctttcggggcgttgcatgcgcctgtcct	Protospacer
  . ************.***** *******

16. spacer 3.8|1358142|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 6, identity: 0.8

ggtattcggggcgttgtatgcggctgtcct	CRISPR spacer
ttctttcggggcgttgcatgcgcctgtcct	Protospacer
  . ************.***** *******

17. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045758 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

18. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045760 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 plasmid pCFSAN000661, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

19. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045755 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 plasmid p1CFSAN000752, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

20. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039470 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001112 plasmid pCFSAN001112, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

21. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039485 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000952 plasmid pCFSAN000952, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

22. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039494 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_1, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

23. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039466 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001118 plasmid pCFSAN001118, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

24. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039468 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001115 plasmid pCFSAN001115, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

25. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039464 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001140 plasmid pCFSAN001140, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

26. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039472 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000970 plasmid pCFSAN000970, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

27. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039474 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000968 plasmid pCFSAN000968_1, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

28. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039492 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000700 plasmid pCFSAN000700, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

29. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039483 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000954 plasmid pCFSAN000954, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

30. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039479 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000960 plasmid pCFSAN000960, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

31. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to CP039501 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 plasmid pCFSAN000189, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

32. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034178 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

33. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039481 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000958 plasmid pCFSAN000958, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

34. spacer 3.25|1359273|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039488 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000753 plasmid pCFSAN000753, complete sequence) position: , mismatch: 6, identity: 0.8

agacatattatggacgaaaacaagaaaaaa	CRISPR spacer
agacaaattatggacgaaaagaaactcaaa	Protospacer
***** ************** **.   ***

35. spacer 3.28|1359474|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to KF030445 (Escherichia phage 1720a-02, complete genome) position: , mismatch: 6, identity: 0.806

tggtct--ccattcatcatatgcaagtgaaaga	CRISPR spacer
--gcctgaccattcatcctaagcaagtgaaagg	Protospacer
  *.**  ********* ** ***********.

36. spacer 4.12|1851240|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to DQ222855 (Bacillus anthracis phage Gamma isolate 53, complete genome) position: , mismatch: 6, identity: 0.8

tcaaaatacccctttgccatatcctcccca	CRISPR spacer
ttaaaatatccctttcccatatcctcactc	Protospacer
*.******.****** ********** *.

37. spacer 4.12|1851240|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to DQ289555 (Bacillus anthracis phage W Beta, complete genome) position: , mismatch: 6, identity: 0.8

tcaaaatacccctttgccatatcctcccca	CRISPR spacer
ttaaaatatccctttcccatatcctcactc	Protospacer
*.******.****** ********** *.

38. spacer 4.12|1851240|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to NC_007814 (Bacillus phage Fah, complete genome) position: , mismatch: 6, identity: 0.8

tcaaaatacccctttgccatatcctcccca	CRISPR spacer
ttaaaatatccctttcccatatcctcactc	Protospacer
*.******.****** ********** *.

39. spacer 4.12|1851240|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to DQ150593 (Bacillus anthracis bacteriophage Fah, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaatacccctttgccatatcctcccca	CRISPR spacer
ttaaaatatccctttcccatatcctcactc	Protospacer
*.******.****** ********** *.

40. spacer 4.12|1851240|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to DQ222853 (Bacillus anthracis phage Gamma isolate 51, complete genome) position: , mismatch: 6, identity: 0.8

tcaaaatacccctttgccatatcctcccca	CRISPR spacer
ttaaaatatccctttcccatatcctcactc	Protospacer
*.******.****** ********** *.

41. spacer 4.12|1851240|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to DQ221100 (Bacteriophage gamma putative terminase small subunit, putative terminase large subunit, putative portal protein, putative prohead protease, putative phage structural protein, putative DNA packaging protein, putative head-tail adaptor, phage related proteins, putative major tail protein, phage related protein, putative tail tape measure protein, phage related protein, putative minor structural protein, putative holin, N-acetylmuramoyl-L-alanine amidase (PlyG), putative lipoprotein, putative transcriptional regulator, conserved hypothetical proteins, FtsK/SpoIIIE family protein, phage related protein, conserved hypothetical protein, putative transcriptional regulator, putative site-specific recombinase, conserved hypothetical protein, putative transcriptional regulators, putative antirepressor, conserved hypothetical protein, putative DNA replication proteins, conserved hypothetical protein, phage related proteins, conserved hypothetical protein, putative transglycosylase, and putative endonuclease genes, complete cds) position: , mismatch: 6, identity: 0.8

tcaaaatacccctttgccatatcctcccca	CRISPR spacer
ttaaaatatccctttcccatatcctcactc	Protospacer
*.******.****** ********** *.

42. spacer 4.12|1851240|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to DQ222851 (Bacillus anthracis phage Cherry, complete genome) position: , mismatch: 6, identity: 0.8

tcaaaatacccctttgccatatcctcccca	CRISPR spacer
ttaaaatatccctttcccatatcctcactc	Protospacer
*.******.****** ********** *.

43. spacer 4.12|1851240|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to DQ289556 (Bacillus anthracis phage Gamma isolate d'Herelle, complete genome) position: , mismatch: 6, identity: 0.8

tcaaaatacccctttgccatatcctcccca	CRISPR spacer
ttaaaatatccctttcccatatcctcactc	Protospacer
*.******.****** ********** *.

44. spacer 4.12|1851240|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to NC_007734 (Bacillus phage WBeta, complete genome) position: , mismatch: 6, identity: 0.8

tcaaaatacccctttgccatatcctcccca	CRISPR spacer
ttaaaatatccctttcccatatcctcactc	Protospacer
*.******.****** ********** *.

45. spacer 4.12|1851240|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to NC_007458 (Bacillus phage Gamma, complete genome) position: , mismatch: 6, identity: 0.8

tcaaaatacccctttgccatatcctcccca	CRISPR spacer
ttaaaatatccctttcccatatcctcactc	Protospacer
*.******.****** ********** *.

46. spacer 4.14|1851373|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 6, identity: 0.8

gtcccctgcatatatgcgtggcgagtgtat	CRISPR spacer
aacccctgcatttatgcgtggggagtatgt	Protospacer
. ********* ********* ****.*.*

47. spacer 4.16|1851506|30|AP018447|CRISPRCasFinder,CRT matches to MN694303 (Marine virus AFVG_250M806, complete genome) position: , mismatch: 6, identity: 0.8

agattcttttaccaaaagataaatttgttg	CRISPR spacer
agtttcttttaccaaaagaaaaactggctt	Protospacer
** **************** ***.* *.*

48. spacer 4.19|1851705|31|AP018447|CRT matches to NZ_CP016381 (Aeromonas hydrophila strain AHNIH1 plasmid pASP-135, complete sequence) position: , mismatch: 6, identity: 0.806

tcaatttagagcttggcggaagcctatttga	CRISPR spacer
tccagccacagcttggcggaagcctttttga	Protospacer
** * ..* **************** *****

49. spacer 3.1|1357678|30|AP018447|CRISPRCasFinder,CRT matches to NZ_CP034095 (Acinetobacter baumannii strain A52 plasmid pA52-3, complete sequence) position: , mismatch: 7, identity: 0.767

taaataaaggattagtaaatttagcaaaca	CRISPR spacer
tgtcaaaagaattagtcaatttagcaaata	Protospacer
*.   ****.****** ***********.*

50. spacer 3.4|1357876|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to KJ018210 (Flavobacterium sp. phage 1/32, complete genome) position: , mismatch: 7, identity: 0.767

atattgaagtcacagaaaaagggttcagag	CRISPR spacer
ctattgaagccacagaaaaagagttaaaga	Protospacer
 ********.***********.*** *...

51. spacer 3.4|1357876|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to AP014317 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C52, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

atattgaagtcacagaaaaagggttcagag	CRISPR spacer
ttatcgaagtcacagaaaaaggctggagca	Protospacer
 ***.***************** *  ** .

52. spacer 3.5|1357942|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.774

tgattttctctatgatttctacgattttttt	CRISPR spacer
ttgttttctctattatttctactatttcatc	Protospacer
* .********** ******** ****. *.

53. spacer 3.5|1357942|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

tgattttctctatgatttctacgattttttt	CRISPR spacer
ttgttttctctattatttctactatttcatc	Protospacer
* .********** ******** ****. *.

54. spacer 3.5|1357942|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 7, identity: 0.774

tgattttctctatgatttctacgattttttt	CRISPR spacer
ttgttttctctattatttctactatttcatc	Protospacer
* .********** ******** ****. *.

55. spacer 3.5|1357942|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 7, identity: 0.774

tgattttctctatgatttctacgattttttt	CRISPR spacer
ttgttttctctattatttctactatttcatc	Protospacer
* .********** ******** ****. *.

56. spacer 3.8|1358142|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to MH617249 (Microviridae sp. isolate ctba67, complete genome) position: , mismatch: 7, identity: 0.767

ggtattcggggcgttgtatgcggctgtcct	CRISPR spacer
gatattcggggcgttgtaagcgggcatcgg	Protospacer
*.**************** **** ..**

57. spacer 3.8|1358142|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to MH617398 (Microviridae sp. isolate ctbg66, complete genome) position: , mismatch: 7, identity: 0.767

ggtattcggggcgttgtatgcggctgtcct	CRISPR spacer
gatattcggggcgttgtaggcgggaatctg	Protospacer
*.**************** ****  .**.

58. spacer 3.17|1358741|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to MK496700 (Capybara microvirus Cap1_SP_92, complete genome) position: , mismatch: 7, identity: 0.767

acaagcaagacacttgccacagggcatggg	CRISPR spacer
acaagcaacacacttaccacagggaacttc	Protospacer
******** ******.******** *.

59. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050105 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence) position: , mismatch: 7, identity: 0.767

tacgacatcggggattacgccgaggccgag	CRISPR spacer
cgggatttcggggctgacgccgaggccgag	Protospacer
.. **. ****** * **************

60. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025014 (Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence) position: , mismatch: 7, identity: 0.767

tacgacatcggggattacgccgaggccgag	CRISPR spacer
cgggatttcggggctgacgccgaggccgag	Protospacer
.. **. ****** * **************

61. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049732 (Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence) position: , mismatch: 7, identity: 0.767

tacgacatcggggattacgccgaggccgag	CRISPR spacer
cgggatttcggggctgacgccgaggccgag	Protospacer
.. **. ****** * **************

62. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013525 (Rhizobium phaseoli strain R744 plasmid pRphaR744c, complete sequence) position: , mismatch: 7, identity: 0.767

tacgacatcggggattacgccgaggccgag	CRISPR spacer
cgggatttcggggctgacgccgaggccgag	Protospacer
.. **. ****** * **************

63. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025508 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence) position: , mismatch: 7, identity: 0.767

tacgacatcggggattacgccgaggccgag	CRISPR spacer
cgggatttcggggctgacgccgaggccgag	Protospacer
.. **. ****** * **************

64. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050110 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence) position: , mismatch: 7, identity: 0.767

tacgacatcggggattacgccgaggccgag	CRISPR spacer
cgggatttcggggctgacgccgaggccgag	Protospacer
.. **. ****** * **************

65. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048282 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248d, complete sequence) position: , mismatch: 7, identity: 0.767

tacgacatcggggattacgccgaggccgag	CRISPR spacer
cgggatttcggggctgacgccgaggccgag	Protospacer
.. **. ****** * **************

66. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030764 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.767

tacgacatcggggattacgccgaggccgag	CRISPR spacer
cgggatttcggggctgacgccgaggccgag	Protospacer
.. **. ****** * **************

67. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NC_010998 (Rhizobium etli CIAT 652 plasmid pA, complete sequence) position: , mismatch: 7, identity: 0.767

tacgacatcggggattacgccgaggccgag	CRISPR spacer
cgggatttcggggctgacgccgaggccgag	Protospacer
.. **. ****** * **************

68. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054033 (Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence) position: , mismatch: 7, identity: 0.767

tacgacatcggggattacgccgaggccgag	CRISPR spacer
cgggatttcggggctgacgccgaggccgag	Protospacer
.. **. ****** * **************

69. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053208 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence) position: , mismatch: 7, identity: 0.767

tacgacatcggggattacgccgaggccgag	CRISPR spacer
cgggatttcggggctgacgccgaggccgag	Protospacer
.. **. ****** * **************

70. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050087 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence) position: , mismatch: 7, identity: 0.767

tacgacatcggggattacgccgaggccgag	CRISPR spacer
cgggatttcggggctgacgccgaggccgag	Protospacer
.. **. ****** * **************

71. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021033 (Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence) position: , mismatch: 7, identity: 0.767

tacgacatc--ggggattacgccgaggccgag	CRISPR spacer
--cggtgaccaggggatgacgccgaggccgag	Protospacer
  **... *  ****** **************

72. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018230 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

tacgacatcggggattacgccgaggccgag	CRISPR spacer
cgggatttcggggctgacgccgaggccgag	Protospacer
.. **. ****** * **************

73. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 7, identity: 0.767

tacgacatcggggattacgccgaggccgag	CRISPR spacer
cgggatttcggggctgacgccgaggccgag	Protospacer
.. **. ****** * **************

74. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 7, identity: 0.767

tacgacatc--ggggattacgccgaggccgag	CRISPR spacer
--cggtgaccaggggataacgccgaggccgag	Protospacer
  **... *  ****** **************

75. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022667 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence) position: , mismatch: 7, identity: 0.767

tacgacatcggggattacgccgaggccgag	CRISPR spacer
cgggatttcggggctgacgccgaggccgag	Protospacer
.. **. ****** * **************

76. spacer 3.19|1358873|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NC_001884 (Bacillus phage SPBc2, complete genome) position: , mismatch: 7, identity: 0.767

ttcagtatcccatatatccaaatatttgaa	CRISPR spacer
ttcagtttccaatatatccaaatataaagt	Protospacer
****** *** **************  ..

77. spacer 3.19|1358873|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to AF020713 (Bacteriophage SPBc2 complete genome) position: , mismatch: 7, identity: 0.767

ttcagtatcccatatatccaaatatttgaa	CRISPR spacer
ttcagtttccaatatatccaaatataaagt	Protospacer
****** *** **************  ..

78. spacer 3.19|1358873|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to MT366946 (Bacillus phage Hyb1phi3Ts-SPbeta, complete genome) position: , mismatch: 7, identity: 0.767

ttcagtatcccatatatccaaatatttgaa	CRISPR spacer
ttcagtttccaatatatccaaatataaagt	Protospacer
****** *** **************  ..

79. spacer 3.20|1358939|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 7, identity: 0.767

attttagagagtgaagtaacaggcgaaaaa	CRISPR spacer
attttagagagtgaattaaaaggttttcaa	Protospacer
*************** *** ***.    **

80. spacer 3.20|1358939|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007513 (Bacillus bombysepticus plasmid pBb, complete genome) position: , mismatch: 7, identity: 0.767

attttagagagtgaagtaacaggcgaaaaa	CRISPR spacer
attttagagagtgaattaaaaggttttcaa	Protospacer
*************** *** ***.    **

81. spacer 3.20|1358939|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014865 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence) position: , mismatch: 7, identity: 0.767

attttagagagtgaagtaacaggcgaaaaa	CRISPR spacer
attttagagagtgaattaaaaggttttcaa	Protospacer
*************** *** ***.    **

82. spacer 3.20|1358939|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023246 (Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

attttagagagtgaagtaacaggcgaaaaa	CRISPR spacer
attttagagagtgaattaaaaggttttcaa	Protospacer
*************** *** ***.    **

83. spacer 3.20|1358939|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NC_049931 (Enterococcus phage vB_EfaP_IME199, complete genome) position: , mismatch: 7, identity: 0.767

attttagagagtgaagtaacaggcgaaaaa	CRISPR spacer
tatttagagagtgatgtaacaggtacagaa	Protospacer
  ************ ********.. *.**

84. spacer 3.23|1359138|33|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to MN693919 (Marine virus AFVG_250M503, complete genome) position: , mismatch: 7, identity: 0.788

ctaaaa----gtgtttgcataagatctaaaagcaaaa	CRISPR spacer
----aactctgtgtttggataagatctaaaatcaata	Protospacer
    **    ******* ************* *** *

85. spacer 3.23|1359138|33|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to MN694478 (Marine virus AFVG_250M504, complete genome) position: , mismatch: 7, identity: 0.788

ctaaaa----gtgtttgcataagatctaaaagcaaaa	CRISPR spacer
----aactctgtgtttggataagatctaaaatcaata	Protospacer
    **    ******* ************* *** *

86. spacer 3.23|1359138|33|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to MN694270 (Marine virus AFVG_250M505, complete genome) position: , mismatch: 7, identity: 0.788

ctaaaa----gtgtttgcataagatctaaaagcaaaa	CRISPR spacer
----aactctgtgtttggataagatctaaaatcaata	Protospacer
    **    ******* ************* *** *

87. spacer 3.23|1359138|33|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to MN694656 (Marine virus AFVG_250M501, complete genome) position: , mismatch: 7, identity: 0.788

ctaaaa----gtgtttgcataagatctaaaagcaaaa	CRISPR spacer
----aactctgtgtttggataagatctaaaatcaata	Protospacer
    **    ******* ************* *** *

88. spacer 3.37|1360072|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NC_017257 (Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) plasmid pLeu, complete sequence) position: , mismatch: 7, identity: 0.774

ttatcatttttttttcggaaatacccgtcaa	CRISPR spacer
ttattaattttttttcggaaataccaaatag	Protospacer
****.* ****************** . .*.

89. spacer 3.37|1360072|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041297 (Acinetobacter indicus strain 80-1-2 plasmid p80-1-2-tetX3, complete sequence) position: , mismatch: 7, identity: 0.774

ttatcatttttttttcggaaatacccgtcaa	CRISPR spacer
cttttaaattttcttcggaaatacccgtgaa	Protospacer
.* *.*  ****.*************** **

90. spacer 4.8|1850975|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to CP017693 (Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence) position: , mismatch: 7, identity: 0.767

acatttttatcgcaaattctggaatctctt	CRISPR spacer
tcgtccgtttcgcaaattctgcaatctctt	Protospacer
 *.*.. * ************ ********

91. spacer 4.8|1850975|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to CP017693 (Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence) position: , mismatch: 7, identity: 0.767

acatttttatcgcaaattctggaatctctt	CRISPR spacer
tcgtccgtttcgcaaattctgcaatctctt	Protospacer
 *.*.. * ************ ********

92. spacer 4.9|1851041|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030204 (Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence) position: , mismatch: 7, identity: 0.767

tcggttggcggaattgctggggtg-tgtaat	CRISPR spacer
gcggctggcggaattactggggtgccatga-	Protospacer
 ***.**********.******** ..*.*

93. spacer 4.16|1851506|30|AP018447|CRISPRCasFinder,CRT matches to MT074137 (Bacteroides phage DAC16, complete genome) position: , mismatch: 7, identity: 0.767

agattcttttaccaaaagat--aaatttgttg	CRISPR spacer
agattcttttacaaatagataaaaaataat--	Protospacer
************ ** ****  *** * .*

94. spacer 4.16|1851506|30|AP018447|CRISPRCasFinder,CRT matches to MT074142 (Bacteroides phage DAC23, complete genome) position: , mismatch: 7, identity: 0.767

agattcttttaccaaaagat--aaatttgttg	CRISPR spacer
agattcttttacaaatagataaaaaataat--	Protospacer
************ ** ****  *** * .*

95. spacer 4.16|1851506|30|AP018447|CRISPRCasFinder,CRT matches to MT074141 (Bacteroides phage DAC22, complete genome) position: , mismatch: 7, identity: 0.767

agattcttttaccaaaagat--aaatttgttg	CRISPR spacer
agattcttttacaaatagataaaaaataat--	Protospacer
************ ** ****  *** * .*

96. spacer 4.16|1851506|30|AP018447|CRISPRCasFinder,CRT matches to MT074139 (Bacteroides phage DAC19, complete genome) position: , mismatch: 7, identity: 0.767

agattcttttaccaaaagat--aaatttgttg	CRISPR spacer
agattcttttacaaatagataaaaaataat--	Protospacer
************ ** ****  *** * .*

97. spacer 4.16|1851506|30|AP018447|CRISPRCasFinder,CRT matches to MT074140 (Bacteroides phage DAC20, complete genome) position: , mismatch: 7, identity: 0.767

agattcttttaccaaaagat--aaatttgttg	CRISPR spacer
agattcttttacaaatagataaaaaataat--	Protospacer
************ ** ****  *** * .*

98. spacer 4.16|1851506|30|AP018447|CRISPRCasFinder,CRT matches to NZ_CP020859 (Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

agattcttttaccaaaagataaatttgttg	CRISPR spacer
tgttatttttaccaaaagataaacctgttc	Protospacer
 * * .*****************..****

99. spacer 4.16|1851506|30|AP018447|CRISPRCasFinder,CRT matches to NC_007930 (Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence) position: , mismatch: 7, identity: 0.767

agattcttttaccaaaagataaatttgttg	CRISPR spacer
tgttatttttaccaaaagataaacctgttc	Protospacer
 * * .*****************..****

100. spacer 4.16|1851506|30|AP018447|CRISPRCasFinder,CRT matches to NZ_LT604075 (Lactobacillus salivarius isolate LPM01 plasmid II) position: , mismatch: 7, identity: 0.767

agattcttttaccaaaagataaatttgttg	CRISPR spacer
tgttatttttaccaaaagataaacctgttc	Protospacer
 * * .*****************..****

101. spacer 4.16|1851506|30|AP018447|CRISPRCasFinder,CRT matches to CP002037 (Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence) position: , mismatch: 7, identity: 0.767

agattcttttaccaaaagataaatttgttg	CRISPR spacer
tgttatttttaccaaaagataaacctgttc	Protospacer
 * * .*****************..****

102. spacer 3.2|1357744|30|AP018447|CRISPRCasFinder,CRT matches to NZ_CP050314 (Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence) position: , mismatch: 8, identity: 0.733

atacttcacaatcacattgtaacttagctt	CRISPR spacer
tgatgtcaaaatcacattgtaacttatcga	Protospacer
  *. *** ***************** *

103. spacer 3.18|1358807|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050082 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence) position: , mismatch: 8, identity: 0.733

tacgacatcggggattacgccgaggccgag	CRISPR spacer
cggtatttcggggctgacgccgaggccgag	Protospacer
..  *. ****** * **************

104. spacer 3.22|1359071|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 8, identity: 0.742

agctaaaaaaaatggggaggtggaaaaatga	CRISPR spacer
ttttattaaaaatggagaggtggacaaatgc	Protospacer
  .**  ********.******** *****

105. spacer 3.24|1359207|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020745 (Bacillus mycoides strain Gnyt1 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

taacttcattctttaaaagaggcaaacaat	CRISPR spacer
ccagcacattctttagaagaagcaaacaag	Protospacer
. * . *********.****.********

106. spacer 3.24|1359207|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024658 (Bacillus cereus strain MLY1 plasmid pMLY1.3, complete sequence) position: , mismatch: 8, identity: 0.733

taacttcattctttaaaagaggcaaacaat	CRISPR spacer
ccagcacattctttagaagaagcaaacaag	Protospacer
. * . *********.****.********

107. spacer 3.28|1359474|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024940 (Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence) position: , mismatch: 8, identity: 0.742

tggtctccattcatcatatgcaagtgaaaga	CRISPR spacer
cagcatgaattcatcatatggaagtggaaga	Protospacer
..*. *  ************ *****.****

108. spacer 3.29|1359541|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048281 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence) position: , mismatch: 8, identity: 0.733

atcctcgctatcgacatcaaa----atcataggt	CRISPR spacer
ctcctcgctatcgacctcaaaaagcatcgc----	Protospacer
 ************** *****    ***..

109. spacer 3.35|1359939|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053838 (Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence) position: , mismatch: 8, identity: 0.742

ggagctaacgagaaaatcaaggaaaaaatct	CRISPR spacer
aaagaatacgagcaaatcaaagaaaaaatca	Protospacer
..**   ***** *******.*********

110. spacer 3.37|1360072|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR699116 (Aquicella lusitana strain SGT-39 plasmid 3) position: , mismatch: 8, identity: 0.742

ttatcatttttttttcggaaatacccgtcaa	CRISPR spacer
ttatcatttctttttcagaaatatcaattcc	Protospacer
*********.******.******.* .*.

111. spacer 4.5|1850777|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025548 (Mycobacterium paragordonae strain 49061 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

ggtagattctgcgatgcacgagcatatcaa	CRISPR spacer
cgccgattctgcggtgcacgaggatatggt	Protospacer
 *. *********.******** **** .

112. spacer 4.9|1851041|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to NC_019331 (Arthrobacter sp. J3-40 plasmid pJ340-114, complete sequence) position: , mismatch: 8, identity: 0.733

tcggttggcggaattgctggggtgtgtaat	CRISPR spacer
tcggctggcggaattgctgggcgaactggt	Protospacer
****.****************  .  *..*

113. spacer 4.16|1851506|30|AP018447|CRISPRCasFinder,CRT matches to MH622943 (Myoviridae sp. isolate ctbc_4, complete genome) position: , mismatch: 8, identity: 0.733

agattcttttaccaaaagataaatttgttg	CRISPR spacer
gagattttttatcaaaagataaatttattt	Protospacer
... *.*****.**************.**

114. spacer 4.16|1851506|30|AP018447|CRISPRCasFinder,CRT matches to MF360958 (Salicola phage SCTP-2, complete genome) position: , mismatch: 8, identity: 0.733

agattcttttaccaaaagataaatttgttg	CRISPR spacer
gttttctattaccaaaagataattttcgta	Protospacer
.  **** ************** ***  *.

115. spacer 4.18|1851639|30|AP018447|CRISPRCasFinder,CRT matches to MK097141 (Vibrio phage P23, complete genome) position: , mismatch: 8, identity: 0.733

tatttttgtgcgtggattatactttaatat	CRISPR spacer
acgttttgtgcgtggattttactttgtagt	Protospacer
   *************** ******.  .*

116. spacer 4.18|1851639|30|AP018447|CRISPRCasFinder,CRT matches to NZ_CP017255 (Clostridium taeniosporum strain 1/k plasmid pCt2, complete sequence) position: , mismatch: 8, identity: 0.733

tatttttgtgcgtggattatactttaatat	CRISPR spacer
ggaggttgtgcgtggattataatttcatag	Protospacer
 .   **************** *** ***

117. spacer 3.3|1357810|30|AP018447|CRISPRCasFinder,CRT matches to NZ_CP009062 (Borreliella afzelii K78 plasmid lp28-1, complete sequence) position: , mismatch: 9, identity: 0.7

aaaaaattcctccaatgtggaaaaacctgt	CRISPR spacer
taaaaattcttccaatttggaaaagtgaag	Protospacer
 ********.****** *******..  .

118. spacer 3.3|1357810|30|AP018447|CRISPRCasFinder,CRT matches to NZ_CP028879 (Borreliella bavariensis PBi plasmid lp28-9, complete sequence) position: , mismatch: 9, identity: 0.7

aaaaaattcctccaatgtggaaaaacctgt	CRISPR spacer
taaaaattcttccaatttggaaaagtgaag	Protospacer
 ********.****** *******..  .

119. spacer 3.7|1358076|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to LT986678 (Poophage MBI-2016a genome assembly, complete genome: monopartite) position: , mismatch: 9, identity: 0.7

ttcactgatttggagaattgatttgctgcc	CRISPR spacer
gctgatgatttggagaattggtttgatgtg	Protospacer
 ... ***************.**** **.

120. spacer 3.8|1358142|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045296 (Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ggtattcggggcgttgtatgcggctgtcct	CRISPR spacer
ggtattcgtggcgatgtatgcggtatctgc	Protospacer
******** **** *********.  .. .

121. spacer 3.17|1358741|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017783 (Rhodobacter sp. LPB0142 plasmid pEJ02, complete sequence) position: , mismatch: 9, identity: 0.7

acaagcaagacacttgccacagggcatggg	CRISPR spacer
gatcgcaagacacttgccacagtgcgggaa	Protospacer
.   ****************** **. *..

122. spacer 3.17|1358741|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017784 (Rhodobacter sp. LPB0142 plasmid pEJ03, complete sequence) position: , mismatch: 9, identity: 0.7

acaagcaagacacttgccacagggcatggg	CRISPR spacer
gatcgcaagacacttgccacagtgcgggaa	Protospacer
.   ****************** **. *..

123. spacer 3.27|1359406|32|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to MG945362 (UNVERIFIED: Microviridae sp. isolate 3122-1711, complete genome) position: , mismatch: 9, identity: 0.719

ttagcatagtttcattaaatgctttttgtgaa	CRISPR spacer
tccacatagtttcattaaaagcattttgctgt	Protospacer
*. .*************** ** *****. .

124. spacer 3.31|1359673|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019726 (Bacteroides uniformis strain NBRC 113350 plasmid pBUN2, complete sequence) position: , mismatch: 9, identity: 0.71

tttttttttttttaacccaaaggagtttttg	CRISPR spacer
atcttttttttataacccaaaggagcaagaa	Protospacer
 *.******** *************.    .

125. spacer 3.32|1359740|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to MG945828 (UNVERIFIED: Microviridae sp. isolate 9000-1602, complete genome) position: , mismatch: 9, identity: 0.7

aaaaacgattttaaaatagaggagtgcgaa	CRISPR spacer
ttaaacgattttaaaatagtggaatttttt	Protospacer
  ***************** ***.* .

126. spacer 3.35|1359939|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NC_048170 (Escherichia phage vB_EcoM_Goslar, complete genome) position: , mismatch: 9, identity: 0.71

ggagctaacgagaaaatcaaggaaaaaatct	CRISPR spacer
gactacaaagagaaattcaaggaaaaaatgg	Protospacer
*.   .** ****** *************

127. spacer 3.35|1359939|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 9, identity: 0.71

ggagctaacgagaaaatcaaggaaaaaatct	CRISPR spacer
atcccgaaggagaaattcaaggaaaaaatta	Protospacer
.   * ** ****** *************.

128. spacer 3.36|1360006|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039329 (Citrobacter portucalensis strain Effluent_1 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

aaatctcctgtatcagaagcatgtttgaat	CRISPR spacer
tgatctcctggatcagacgcatgttgaggg	Protospacer
 .******** ****** ******* ...

129. spacer 3.36|1360006|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034132 (Klebsiella quasipneumoniae strain G4584 plasmid pG4584_81.9Kb, complete sequence) position: , mismatch: 9, identity: 0.7

aaatctcctgtatcagaagcatgtttgaat	CRISPR spacer
tgatctcctggatcagacgcatgttgaggg	Protospacer
 .******** ****** ******* ...

130. spacer 3.36|1360006|30|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034140 (Klebsiella quasipneumoniae subsp. similipneumoniae strain G747 plasmid pG747_84.1Kb, complete sequence) position: , mismatch: 9, identity: 0.7

aaatctcctgtatcagaagcatgtttgaat	CRISPR spacer
tgatctcctggatcagacgcatgttgaggg	Protospacer
 .******** ****** ******* ...

131. spacer 4.3|1850645|30|AP018447|PILER-CR,CRISPRCasFinder,CRT matches to MH552571 (Microviridae sp. isolate ctgh214, complete genome) position: , mismatch: 9, identity: 0.7

aagatttgcacagagtaaagaggcaaagag	CRISPR spacer
agaccgggcacagagtaaagaggcataggc	Protospacer
*.. .  ****************** **.

132. spacer 4.16|1851506|30|AP018447|CRISPRCasFinder,CRT matches to NZ_CP020429 (Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agattcttttaccaaaagataaatttgttg	CRISPR spacer
tctttcctttatcaaaagataaatttaaat	Protospacer
   ***.****.**************.

133. spacer 4.16|1851506|30|AP018447|CRISPRCasFinder,CRT matches to MN480763 (Streptococcus salivarius strain YU10 plasmid pSsal-YU10, complete sequence) position: , mismatch: 9, identity: 0.7

agattcttttaccaaaagataaatttgttg	CRISPR spacer
tctttcctttatcaaaagataaatttaaat	Protospacer
   ***.****.**************.

134. spacer 4.16|1851506|30|AP018447|CRISPRCasFinder,CRT matches to NZ_CP020439 (Streptococcus equinus strain FDAARGOS_251 plasmid unamed1 sequence) position: , mismatch: 9, identity: 0.7

agattcttttaccaaaagataaatttgttg	CRISPR spacer
tctttcctttatcaaaagataaatttaaat	Protospacer
   ***.****.**************.

135. spacer 1.1|148378|32|AP018447|PILER-CR matches to NC_014628 (Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence) position: , mismatch: 10, identity: 0.688

gccattgattgattctttggctcaaattcccc	CRISPR spacer
aacattgattgatgctttgcctcaagtggatg	Protospacer
. *********** ***** *****.*   .

136. spacer 1.1|148378|32|AP018447|PILER-CR matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 10, identity: 0.688

gccattgattgattctttggctcaaattcccc	CRISPR spacer
ttttgcgattgattcttaggttcaaattcttc	Protospacer
 ..  .*********** **.********..*

137. spacer 2.1|544182|32|AP018447|PILER-CR matches to NC_014628 (Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence) position: , mismatch: 10, identity: 0.688

gccattgattgattctttggctcaaattcccc	CRISPR spacer
aacattgattgatgctttgcctcaagtggatg	Protospacer
. *********** ***** *****.*   .

138. spacer 2.1|544182|32|AP018447|PILER-CR matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 10, identity: 0.688

gccattgattgattctttggctcaaattcccc	CRISPR spacer
ttttgcgattgattcttaggttcaaattcttc	Protospacer
 ..  .*********** **.********..*

139. spacer 3.23|1359138|33|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to GU943056 (Uncultured phage MedDCM-OCT-S04-C348 genomic sequence) position: , mismatch: 10, identity: 0.697

ctaaaagtgtttgcataagatctaaaagcaaaa	CRISPR spacer
gacaaagtatttgcatcagatctaaaaagattt	Protospacer
   *****.******* **********. *

140. spacer 3.27|1359406|32|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 10, identity: 0.688

ttagcatagtttcattaaatgctttttgtgaa	CRISPR spacer
gctttgtattttcattcaatgctttttgttca	Protospacer
 .  ..** ******* ************  *

141. spacer 3.27|1359406|32|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006906 (Clostridium baratii str. Sullivan plasmid pCBJ, complete sequence) position: , mismatch: 10, identity: 0.688

ttagcatagtttcattaaatgctttttgtgaa	CRISPR spacer
aatccatagtttctttaactgctttttcaaca	Protospacer
    ********* **** ********  . *

142. spacer 3.37|1360072|31|AP018447|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031103 (Leclercia sp. W17 plasmid pW17-2, complete sequence) position: , mismatch: 10, identity: 0.677

ttatcatttttttttcggaaatacccgtcaa	CRISPR spacer
ttttcatttttttttctgaaatattgacatg	Protospacer
** ************* ******.. ..  .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. AP018447

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection