CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP029011	Candidatus Sulcia muelleri isolate SMEUTCHI chromosome, complete genome	2 crisprs	NA	4	4	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP029011_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029011_1

239535-239862

Orphan

Consensus_repeat	Method
ATTAAAAATTTTAAATAAATTGAAAAA	CRISPRCasFinder
TNAAAATTTTTAATAAATTGAAAANA	CRT

6 spacers

The CRISPR arrays of CP029011_1

>merge|CP029011|1|239535-239862|CRISPRCasFinder,CRT
AGTTTTAAAAATAAATAAATTTAAAAAAGTAATTTTAAAATTAAAACAAGATTATAAATTCAAAATTTTTAATAAATTGAAAATAAAGGCTAATTTAGAGAAATTCAAAATTTTTAATAAATTGAAAATAAATTATAATTTAGATAAATTAAAAATTTTAAATAAATTGAAAAACTTTTCTTCTTTAGAATTAGAAGAATTATTAAAAATTTTTAATAAATTGAAAAAATATTTTAATTATTTTAATTTAGGTATTTTAAAAAATTTTAATAAATTTAAAAAATGTTCTCAGTTAGAGAGATTAAAAATTTTTAATCAATTGAAAAAA

>CP029011|1|1|239535-239862|CRISPRCasFinder
AGTTTTAAAAATAAATAAATTTAAAAA	AGTAATTTTAAAATTAAAACAAGATTATAA
ATTCAAAATTTTTAATAAATTGAAAAT	AAAGGCTAATTTAGAGAA
ATTCAAAATTTTTAATAAATTGAAAAT	AAATTATAATTTAGATAA
ATTAAAAATTTTAAATAAATTGAAAAA	CTTTTCTTCTTTAGAATTAGAAGAATT
ATTAAAAATTTTTAATAAATTGAAAAA	ATATTTTAATTATTTTAA
TTTAGGTATTTTAAAAAATTTTAATAA	ATTTAAAAAATGTTCTCAGTTAGAGAG
ATTAAAAATTTTTAATCAATTGAAAAAA

>CP029011|1|1|239594-239862|CRT
TCAAAATTTTTAATAAATTGAAAATA	AAGGCTAATTTAGAGAAAT
TCAAAATTTTTAATAAATTGAAAATA	AATTATAATTTAGATAAAT
TAAAAATTTTAAATAAATTGAAAAAC	TTTTCTTCTTTAGAATTAGAAGAATTAT
TAAAAATTTTTAATAAATTGAAAAAA	TATTTTAATTATTTTAATTTAGGTATTT
TAAAAAATTTTAATAAATTTAAAAAA	TGTTCTCAGTTAGAGAGAT
TAAAAATTTTTAATCAATTGAAAAAA

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Crispr_ID: CP029011_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029011_2

239944-240018

Orphan

Consensus_repeat	Method
ATTAAAAATTTTAAATAAATTGAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029011_2

>merge|CP029011|2|239944-240018|CRISPRCasFinder
AAAAAAAATGTCAATTAAAAAAAAAAAACCGATTACTTCAAGTCAAAGATTCAAAATAATAAATTCATTTAAAGA

>CP029011|2|2|239944-240018|CRISPRCasFinder
AAAAAAAATGTCAATTAAAAAAAAAAA	ACCGATTACTTCAAGTCAAAG
ATTCAAAATAATAAATTCATTTAAAGA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP029011_1	1.5\|239763\|18\|CP029011\|CRISPRCasFinder	239763-239780	18	CP029011.1	116766-116783	1	0.944
CP029011_1	1.2\|239619\|18\|CP029011\|CRISPRCasFinder	239619-239636	18	CP029011.1	179772-179789	2	0.889
CP029011_1	1.3\|239664\|18\|CP029011\|CRISPRCasFinder	239664-239681	18	CP029011.1	7796-7813	2	0.889
CP029011_1	1.3\|239664\|18\|CP029011\|CRISPRCasFinder	239664-239681	18	CP029011.1	78848-78865	2	0.889
CP029011_1	1.3\|239664\|18\|CP029011\|CRISPRCasFinder	239664-239681	18	CP029011.1	157557-157574	2	0.889
CP029011_1	1.3\|239664\|18\|CP029011\|CRISPRCasFinder	239664-239681	18	CP029011.1	218160-218177	2	0.889
CP029011_1	1.3\|239664\|18\|CP029011\|CRISPRCasFinder	239664-239681	18	CP029011.1	232290-232307	2	0.889
CP029011_1	1.5\|239763\|18\|CP029011\|CRISPRCasFinder	239763-239780	18	CP029011.1	6793-6810	2	0.889
CP029011_1	1.5\|239763\|18\|CP029011\|CRISPRCasFinder	239763-239780	18	CP029011.1	15258-15275	2	0.889
CP029011_1	1.5\|239763\|18\|CP029011\|CRISPRCasFinder	239763-239780	18	CP029011.1	41063-41080	2	0.889
CP029011_1	1.5\|239763\|18\|CP029011\|CRISPRCasFinder	239763-239780	18	CP029011.1	77591-77608	2	0.889
CP029011_1	1.5\|239763\|18\|CP029011\|CRISPRCasFinder	239763-239780	18	CP029011.1	160480-160497	2	0.889
CP029011_1	1.5\|239763\|18\|CP029011\|CRISPRCasFinder	239763-239780	18	CP029011.1	189581-189598	2	0.889
CP029011_1	1.8\|239665\|19\|CP029011\|CRT	239665-239683	19	CP029011.1	78849-78867	2	0.895

1. spacer 1.5|239763|18|CP029011|CRISPRCasFinder matches to position: 116766-116783, mismatch: 1, identity: 0.944

atattttaattattttaa	CRISPR spacer
atattttatttattttaa	Protospacer
******** *********

2. spacer 1.2|239619|18|CP029011|CRISPRCasFinder matches to position: 179772-179789, mismatch: 2, identity: 0.889

aaaggctaatttagagaa	CRISPR spacer
aaaggataatttagaaaa	Protospacer
***** *********.**

3. spacer 1.3|239664|18|CP029011|CRISPRCasFinder matches to position: 7796-7813, mismatch: 2, identity: 0.889

aaattataatttagataa	CRISPR spacer
aatttatgatttagataa	Protospacer
** ****.**********

4. spacer 1.3|239664|18|CP029011|CRISPRCasFinder matches to position: 78848-78865, mismatch: 2, identity: 0.889

aaattataatttagataa	CRISPR spacer
aaattcaaatttagataa	Protospacer
*****  ***********

5. spacer 1.3|239664|18|CP029011|CRISPRCasFinder matches to position: 157557-157574, mismatch: 2, identity: 0.889

aaattataatttagataa	CRISPR spacer
aaattattatttatataa	Protospacer
******* ***** ****

6. spacer 1.3|239664|18|CP029011|CRISPRCasFinder matches to position: 218160-218177, mismatch: 2, identity: 0.889

aaattataatttagataa	CRISPR spacer
aaattataatttaattaa	Protospacer
*************. ***

7. spacer 1.3|239664|18|CP029011|CRISPRCasFinder matches to position: 232290-232307, mismatch: 2, identity: 0.889

aaattataatttagataa	CRISPR spacer
aaattataatgtaaataa	Protospacer
********** **.****

8. spacer 1.5|239763|18|CP029011|CRISPRCasFinder matches to position: 6793-6810, mismatch: 2, identity: 0.889

atattttaattattttaa	CRISPR spacer
atattttaataaatttaa	Protospacer
********** * *****

9. spacer 1.5|239763|18|CP029011|CRISPRCasFinder matches to position: 15258-15275, mismatch: 2, identity: 0.889

atattttaattattttaa	CRISPR spacer
attttttaaatattttaa	Protospacer
** ****** ********

10. spacer 1.5|239763|18|CP029011|CRISPRCasFinder matches to position: 41063-41080, mismatch: 2, identity: 0.889

atattttaattattttaa	CRISPR spacer
atatttaaattatttaaa	Protospacer
****** ******** **

11. spacer 1.5|239763|18|CP029011|CRISPRCasFinder matches to position: 77591-77608, mismatch: 2, identity: 0.889

atattttaattattttaa	CRISPR spacer
attttttaataattttaa	Protospacer
** ******* *******

12. spacer 1.5|239763|18|CP029011|CRISPRCasFinder matches to position: 160480-160497, mismatch: 2, identity: 0.889

atattttaattattttaa	CRISPR spacer
atataataattattttaa	Protospacer
****  ************

13. spacer 1.5|239763|18|CP029011|CRISPRCasFinder matches to position: 189581-189598, mismatch: 2, identity: 0.889

atattttaattattttaa	CRISPR spacer
atatattatttattttaa	Protospacer
**** *** *********

14. spacer 1.8|239665|19|CP029011|CRT matches to position: 78849-78867, mismatch: 2, identity: 0.895

aattataatttagataaat	CRISPR spacer
aattcaaatttagataaat	Protospacer
****  *************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_013962	Candidatus Riesia pediculicola USDA plasmid pPAN, complete sequence	6905-6932	4	0.857
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP027564	Weissella confusa strain VTT E-133279 plasmid pWconfE3279-1, complete sequence	2485-2512	4	0.857
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_011258	Borrelia recurrentis A1 plasmid pl37, complete sequence	1905-1932	4	0.857
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_011224	Borrelia duttonii Ly plasmid pl11, complete sequence	1806-1833	4	0.857
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	CP019152	Acinetobacter lwoffii strain ZS207 plasmid pZS-2, complete sequence	10420-10447	4	0.857
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP015630	Borrelia turicatae strain BTE5EL plasmid lp159	152284-152311	4	0.857
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	AP014459	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S45-C237, * SEQUENCING IN PROGRESS *, 3 ordered pieces	2381-2410	5	0.833
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	KY065464	Streptococcus phage IPP23, complete genome	14232-14261	5	0.833
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	NZ_MF951102	Weissella cibaria strain W5 plasmid pA010, complete sequence	3765-3794	5	0.833
CP029011_1	1.4\|239709\|27\|CP029011\|CRISPRCasFinder	239709-239735	27	MF001355	Proteus phage PM2, partial genome	4825-4851	5	0.815
CP029011_1	1.4\|239709\|27\|CP029011\|CRISPRCasFinder	239709-239735	27	KP890823	Proteus phage vB_PmiM_Pm5461, complete genome	18497-18523	5	0.815
CP029011_1	1.4\|239709\|27\|CP029011\|CRISPRCasFinder	239709-239735	27	KT264824	Gokushovirus WZ-2015a isolate 76Mky15, complete genome	2480-2506	5	0.815
CP029011_1	1.4\|239709\|27\|CP029011\|CRISPRCasFinder	239709-239735	27	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	6589-6615	5	0.815
CP029011_1	1.4\|239709\|27\|CP029011\|CRISPRCasFinder	239709-239735	27	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	16274-16300	5	0.815
CP029011_1	1.4\|239709\|27\|CP029011\|CRISPRCasFinder	239709-239735	27	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	16274-16300	5	0.815
CP029011_1	1.4\|239709\|27\|CP029011\|CRISPRCasFinder	239709-239735	27	NC_013509	Edwardsiella tarda EIB202 plasmid pEIB202, complete sequence	20935-20961	5	0.815
CP029011_1	1.4\|239709\|27\|CP029011\|CRISPRCasFinder	239709-239735	27	MN694510	Marine virus AFVG_250M493, complete genome	27518-27544	5	0.815
CP029011_1	1.4\|239709\|27\|CP029011\|CRISPRCasFinder	239709-239735	27	KY593455	Yersinia phage fHe-Yen9-01, complete genome	112055-112081	5	0.815
CP029011_1	1.4\|239709\|27\|CP029011\|CRISPRCasFinder	239709-239735	27	NC_019909	Yersinia phage phiR1-RT complete genome	110966-110992	5	0.815
CP029011_1	1.4\|239709\|27\|CP029011\|CRISPRCasFinder	239709-239735	27	NC_028820	Yersinia phage vB_YenM_TG1, complete genome	102550-102576	5	0.815
CP029011_1	1.9\|239710\|28\|CP029011\|CRT	239710-239737	28	MN694510	Marine virus AFVG_250M493, complete genome	27516-27543	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP028867	Borreliella garinii strain 20047 plasmid cp26, complete sequence	20426-20453	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	MK358448	Vibrio phage 5, complete genome	12496-12523	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP009060	Borreliella afzelii K78 plasmid cp26, complete sequence	1663-1690	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP018750	Borreliella garinii strain CIP 103362 isolate 20047 plasmid cp26, complete sequence	5356-5383	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_018983	Borrelia burgdorferi 297 plasmid 297_cp26, complete sequence	1656-1683	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_017401	Borreliella burgdorferi N40 plasmid N40_cp26, complete sequence	1656-1683	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_017395	Borreliella burgdorferi JD1 plasmid JD1 cp26, complete sequence	1659-1686	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_015907	Borreliella bissettii DN127 plasmid cp26, complete sequence	1661-1688	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP031398	Borreliella burgdorferi strain MM1 plasmid plsm_cp26, complete sequence	1614-1641	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_011724	Borreliella burgdorferi ZS7 plasmid ZS7_cp26, complete sequence	1657-1684	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_001903	Borreliella burgdorferi B31 plasmid cp26, complete sequence	1656-1683	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP019755	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp26, complete sequence	1656-1683	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP015797	Borrelia mayonii strain MN14-1539 plasmid cp26, complete sequence	1666-1693	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP017202	Borreliella burgdorferi strain B331 plasmid B331_cp26, complete sequence	1656-1683	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP009213	Borreliella afzelii Tom3107 plasmid cp26, complete sequence	1663-1690	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP015781	Borrelia mayonii strain MN14-1420 plasmid cp26, complete sequence	1666-1693	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_017725	Borreliella garinii BgVir plasmid cp26, complete sequence	1655-1682	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_006128	Borreliella bavariensis PBi plasmid cp26, complete sequence	1663-1690	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_019225	Borrelia burgdorferi plasmid cp26, complete sequence	1657-1684	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_017229	Borreliella afzelii PKo plasmid cp26, complete sequence	1662-1689	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	MN694811	Marine virus AFVG_250M587, complete genome	22998-23025	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	KJ473422	Acinetobacter phage vB_AbaM_Acibel004, complete genome	17165-17192	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	MK905543	Vibrio phage USC-1, complete genome	14224-14251	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_KX880944	Escherichia coli strain pMCR-1-P3 plasmid pMCR-1-P3, complete sequence	94837-94864	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP026938	Escherichia coli strain CFS3292 plasmid pCFS3292-3, complete sequence	80844-80871	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	MK250029	Prevotella phage Lak-C1, complete genome	23585-23612	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	MF431726	Vibrio phage vB_ValP_IME271, complete genome	298-325	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	MK250016	Prevotella phage Lak-A1, complete genome	49212-49239	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	MK250019	Prevotella phage Lak-A2, complete genome	514199-514226	5	0.821
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	MN850584	Escherichia phage arall, complete genome	137373-137400	5	0.821
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	NC_011247	Borrelia duttonii Ly plasmid pl165, complete sequence	24492-24521	6	0.8
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	NZ_CP038502	Acinetobacter baumannii strain CIAT758 plasmid unnamed2, complete sequence	46573-46602	6	0.8
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	MT375529	Pelagibacter phage Kolga EXVC01, complete genome	8770-8799	6	0.8
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	KY065457	Streptococcus phage IPP16, complete genome	14573-14602	6	0.8
CP029011_1	1.4\|239709\|27\|CP029011\|CRISPRCasFinder	239709-239735	27	NC_022603	Carnobacterium inhibens subsp. gilichinskyi plasmid pWNCR64, complete sequence	23486-23512	6	0.778
CP029011_1	1.9\|239710\|28\|CP029011\|CRT	239710-239737	28	MF001355	Proteus phage PM2, partial genome	4826-4853	6	0.786
CP029011_1	1.9\|239710\|28\|CP029011\|CRT	239710-239737	28	KP890823	Proteus phage vB_PmiM_Pm5461, complete genome	18498-18525	6	0.786
CP029011_1	1.9\|239710\|28\|CP029011\|CRT	239710-239737	28	KT264824	Gokushovirus WZ-2015a isolate 76Mky15, complete genome	2478-2505	6	0.786
CP029011_1	1.9\|239710\|28\|CP029011\|CRT	239710-239737	28	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	72188-72215	6	0.786
CP029011_1	1.9\|239710\|28\|CP029011\|CRT	239710-239737	28	KY593455	Yersinia phage fHe-Yen9-01, complete genome	112056-112083	6	0.786
CP029011_1	1.9\|239710\|28\|CP029011\|CRT	239710-239737	28	NC_019909	Yersinia phage phiR1-RT complete genome	110967-110994	6	0.786
CP029011_1	1.9\|239710\|28\|CP029011\|CRT	239710-239737	28	NC_028820	Yersinia phage vB_YenM_TG1, complete genome	102551-102578	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	KT997868	Uncultured Mediterranean phage uvDeep-CGR2-KM24-C165, complete genome	16369-16396	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	LT960552	Yersinia phage fHe-Yen9-03 genome assembly, complete genome: monopartite	4649-4676	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	LR596615	Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I	4560-4587	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_042116	Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite	4560-4587	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	MN562221	Photobacterium phage PDCC-1, complete genome	121795-121822	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_KJ776585	Clostridium botulinum strain DB2 plasmid pDB2, complete sequence	2957-2984	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_KJ776583	Clostridium botulinum strain KapchunkaB3 plasmid pKAPB3, complete sequence	2957-2984	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_KJ776576	Clostridium botulinum strain Eklund2B plasmid pEklund2B, complete sequence	2959-2986	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_KJ776579	Clostridium botulinum strain KapchunkaB2 plasmid pKAPB2, complete sequence	2957-2984	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_018653	Clostridium botulinum B str. Eklund 17B (NRP) plasmid p17BNRP, complete sequence	2942-2969	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_010680	Clostridium botulinum B str. Eklund 17B (NRP) plasmid pCLL, complete sequence	37053-37080	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP028164	Staphylococcus aureus strain CFSAN064038 plasmid pGMI17-006, complete sequence	43408-43435	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_013377	Staphylococcus epidermidis plasmid SAP105A, complete sequence	4997-5024	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	KJ936628	Vibrio phage VPp1, complete genome	30938-30965	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	MK483107	Vibrio phage vB_VpP_BA6, complete genome	333-360	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_KX520649	Staphylococcus epidermidis strain 14-01514 plasmid p14-01514, complete sequence	22844-22871	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP024036	Bacillus aryabhattai strain K13 plasmid unnamed1	110678-110705	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_KM521837	Staphylococcus epidermidis strain 12-02300 plasmid p12-02300, complete sequence	21903-21930	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP007658	Staphylococcus aureus strain V2200 plasmid pV2200, complete sequence	16742-16769	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP017683	Staphylococcus aureus strain CFSAN007850 plasmid pCFSAN007850, complete sequence	32236-32263	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_013331	Staphylococcus aureus plasmid SAP047A, complete sequence	7967-7994	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	CP030480	Staphylococcus aureus strain ER04246.3 plasmid unnamed1, complete sequence	2503-2530	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	MK992500	Staphylococcus aureus strain 5Sau489 plasmid p5Sau489, complete sequence	7682-7709	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	MK992499	Staphylococcus aureus strain 17Sau58 plasmid p17Sau58, complete sequence	7682-7709	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP040561	Staphylococcus aureus strain Col52-A5 plasmid pCOL52-A5, complete sequence	7682-7709	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	MH779519	Lactococcus phage vB_LLc_bIBB14, complete genome	6650-6677	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	MT074141	Bacteroides phage DAC22, complete genome	79119-79146	6	0.786
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	MH779520	Lactococcus phage vB_Llc_bIBB27, complete genome	6651-6678	6	0.786
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	CP024686	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence	16795-16824	7	0.767
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	MN693184	Marine virus AFVG_25M66, complete genome	37539-37568	7	0.767
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	NZ_CP021282	Legionella pneumophila subsp. pneumophila strain Flint 2 (D-7477) plasmid unnamed, complete sequence	18605-18634	7	0.767
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	NZ_CP016031	Legionella pneumophila strain OLDA plasmid unnamed, complete sequence	38903-38932	7	0.767
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	AP014020	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C109A-MedDCM-OCT-S27-C18, * SEQUENCING IN PROGRESS *	7688-7717	7	0.767
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	AP014021	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C109A-MedDCM-OCT-S44-C26, * SEQUENCING IN PROGRESS *	5527-5556	7	0.767
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	NZ_LT598658	Legionella pneumophila strain Lpm7613 isolate Lpm7613 plasmid 2	49415-49444	7	0.767
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	NZ_LN681226	Legionella hackeliae strain ATCC 35250 plasmid II, complete sequence	8410-8439	7	0.767
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	NZ_CP021287	Legionella pneumophila subsp. pneumophila strain Albuquerque 1 (D-7474) plasmid unnamed, complete sequence	79715-79744	7	0.767
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	NC_006365	Legionella pneumophila str. Paris plasmid pLPP, complete sequence	54945-54974	7	0.767
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	NZ_MG205641	Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence	87564-87593	7	0.767
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	NZ_MG205643	Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence	78674-78703	7	0.767
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	NZ_MG205642	Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence	87564-87593	7	0.767
CP029011_1	1.9\|239710\|28\|CP029011\|CRT	239710-239737	28	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	16272-16299	7	0.75
CP029011_1	1.9\|239710\|28\|CP029011\|CRT	239710-239737	28	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	16272-16299	7	0.75
CP029011_1	1.9\|239710\|28\|CP029011\|CRT	239710-239737	28	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	6590-6617	7	0.75
CP029011_1	1.9\|239710\|28\|CP029011\|CRT	239710-239737	28	NC_013509	Edwardsiella tarda EIB202 plasmid pEIB202, complete sequence	20936-20963	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP014149	Paeniclostridium sordellii strain AM370 plasmid pRSJ16_1, complete sequence	7456-7483	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	499870-499897	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP010112	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence	169742-169769	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	CP024686	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence	269841-269868	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP015730	Bacillus cereus strain A1 plasmid pBCA1, complete sequence	105195-105222	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	73988-74015	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP016590	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-02, complete sequence	243495-243522	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP012100	Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence	388678-388705	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP016596	Bacillus cereus strain K8 plasmid pBCM301, complete sequence	288657-288684	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_010180	Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence	46247-46274	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP013682	Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence	142048-142075	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP013276	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-1-360K, complete sequence	67838-67865	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP043831	Bacillus sp. BS98 plasmid unnamed1	271309-271336	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP039722	Bacillus thuringiensis strain BT-59 plasmid p1, complete sequence	205182-205209	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_018689	Bacillus thuringiensis MC28 plasmid pMC429, complete sequence	328083-328110	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP045608	Bacillus cereus strain SB1 plasmid p2, complete sequence	239915-239942	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP009639	Bacillus cereus 03BB108 plasmid pBFI_1, complete sequence	219808-219835	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP009349	Bacillus thuringiensis HD1002 plasmid 1, complete sequence	143838-143865	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP013295	Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence	152764-152791	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP045023	Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence	67839-67866	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP018741	Bacillus cereus strain FORC_047 plasmid pFORC47_1, complete sequence	169583-169610	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP053963	Bacillus cereus strain FDAARGOS_802 plasmid unnamed3, complete sequence	261392-261419	7	0.75
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	MN693222	Marine virus AFVG_25M67, complete genome	2576-2603	7	0.75
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	MN693386	Marine virus AFVG_25M538, complete genome	14745-14774	8	0.733
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	MN693115	Marine virus AFVG_25M537, complete genome	20053-20082	8	0.733
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	NZ_CP007231	Yersinia similis strain Y_sim_228 plasmid unnamed, complete sequence	13950-13979	8	0.733
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NZ_CP028889	Borrelia turcica IST7 plasmid lp35, complete sequence	20750-20777	8	0.714
CP029011_1	1.10\|239764\|28\|CP029011\|CRT	239764-239791	28	NC_018688	Bacillus thuringiensis MC28 plasmid pMC319, complete sequence	128909-128936	8	0.714
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	118280-118309	9	0.7
CP029011_1	1.1\|239562\|30\|CP029011\|CRISPRCasFinder	239562-239591	30	NZ_CP040855	Lactobacillus johnsonii strain G2A plasmid unnamed1	78427-78456	9	0.7

1. spacer 1.10|239764|28|CP029011|CRT matches to NC_013962 (Candidatus Riesia pediculicola USDA plasmid pPAN, complete sequence) position: , mismatch: 4, identity: 0.857

tattttaattattttaatttaggtattt	CRISPR spacer
gtttttaattaatttaatttatgtattt	Protospacer
  ********* ********* ******

2. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP027564 (Weissella confusa strain VTT E-133279 plasmid pWconfE3279-1, complete sequence) position: , mismatch: 4, identity: 0.857

tattttaattattttaatttaggtattt	CRISPR spacer
tattttaattattttaattaaagtagta	Protospacer
******************* *.*** *

3. spacer 1.10|239764|28|CP029011|CRT matches to NC_011258 (Borrelia recurrentis A1 plasmid pl37, complete sequence) position: , mismatch: 4, identity: 0.857

tattttaattattttaatttaggtattt---	CRISPR spacer
tattttaattattttaatatag---tttgaa	Protospacer
****************** ***   ***

4. spacer 1.10|239764|28|CP029011|CRT matches to NC_011224 (Borrelia duttonii Ly plasmid pl11, complete sequence) position: , mismatch: 4, identity: 0.857

tattttaattattttaatttaggtattt---	CRISPR spacer
tattttaattattttaatatag---tttgaa	Protospacer
****************** ***   ***

5. spacer 1.10|239764|28|CP029011|CRT matches to CP019152 (Acinetobacter lwoffii strain ZS207 plasmid pZS-2, complete sequence) position: , mismatch: 4, identity: 0.857

tattttaattattttaatttaggtattt-	CRISPR spacer
tattttaattaatttaattta-atatctc	Protospacer
*********** ********* .***.*

6. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP015630 (Borrelia turicatae strain BTE5EL plasmid lp159) position: , mismatch: 4, identity: 0.857

tattttaattattttaattt---aggtattt	CRISPR spacer
tattttaatcattttaatttataaggta---	Protospacer
*********.**********   *****

7. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to AP014459 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S45-C237, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 5, identity: 0.833

agtaattttaaaattaaaacaagattataa	CRISPR spacer
aatgattttaaaattaaatcaaaattatat	Protospacer
*.*.************** ***.******

8. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to KY065464 (Streptococcus phage IPP23, complete genome) position: , mismatch: 5, identity: 0.833

agtaattttaaaattaaaacaagattataa	CRISPR spacer
agctattttaaaattaaaaaaagcttatga	Protospacer
**. *************** *** ****.*

9. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to NZ_MF951102 (Weissella cibaria strain W5 plasmid pA010, complete sequence) position: , mismatch: 5, identity: 0.833

agtaatt--ttaaaattaaaacaagattataa	CRISPR spacer
--tatttgattataattaaaaaaagattataa	Protospacer
  ** **  *** ******** **********

10. spacer 1.4|239709|27|CP029011|CRISPRCasFinder matches to MF001355 (Proteus phage PM2, partial genome) position: , mismatch: 5, identity: 0.815

cttttcttctttagaattagaagaatt	CRISPR spacer
atcatcttctttagaattagaagagtg	Protospacer
 *. ********************.*

11. spacer 1.4|239709|27|CP029011|CRISPRCasFinder matches to KP890823 (Proteus phage vB_PmiM_Pm5461, complete genome) position: , mismatch: 5, identity: 0.815

cttttcttctttagaattagaagaatt	CRISPR spacer
atcatcttctttagaattagaagagtg	Protospacer
 *. ********************.*

12. spacer 1.4|239709|27|CP029011|CRISPRCasFinder matches to KT264824 (Gokushovirus WZ-2015a isolate 76Mky15, complete genome) position: , mismatch: 5, identity: 0.815

cttttcttctttagaattagaagaatt	CRISPR spacer
cttttcttctttagaattaaaaacctg	Protospacer
*******************.**.  *

13. spacer 1.4|239709|27|CP029011|CRISPRCasFinder matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 5, identity: 0.815

cttttcttctttagaattagaagaatt	CRISPR spacer
cgtttcttctttagaatcagaaaaacc	Protospacer
* ***************.****.**..

14. spacer 1.4|239709|27|CP029011|CRISPRCasFinder matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 5, identity: 0.815

cttttcttctttagaattagaagaatt	CRISPR spacer
cgtttcttctttagaatcagaaaaacc	Protospacer
* ***************.****.**..

15. spacer 1.4|239709|27|CP029011|CRISPRCasFinder matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 5, identity: 0.815

cttttcttctttagaattagaagaatt	CRISPR spacer
cgtttcttctttagaatcagaaaaacc	Protospacer
* ***************.****.**..

16. spacer 1.4|239709|27|CP029011|CRISPRCasFinder matches to NC_013509 (Edwardsiella tarda EIB202 plasmid pEIB202, complete sequence) position: , mismatch: 5, identity: 0.815

cttttcttctttagaattagaagaatt	CRISPR spacer
cgtttcttctttagaatcagaaaaacc	Protospacer
* ***************.****.**..

17. spacer 1.4|239709|27|CP029011|CRISPRCasFinder matches to MN694510 (Marine virus AFVG_250M493, complete genome) position: , mismatch: 5, identity: 0.815

cttttcttctttagaattagaagaatt	CRISPR spacer
tatttcttctttagaattaaacgaact	Protospacer
. *****************.* ***.*

18. spacer 1.4|239709|27|CP029011|CRISPRCasFinder matches to KY593455 (Yersinia phage fHe-Yen9-01, complete genome) position: , mismatch: 5, identity: 0.815

cttttcttctttagaattagaagaatt	CRISPR spacer
atcttcttctttagaaccagaagaatg	Protospacer
 *.*************..********

19. spacer 1.4|239709|27|CP029011|CRISPRCasFinder matches to NC_019909 (Yersinia phage phiR1-RT complete genome) position: , mismatch: 5, identity: 0.815

cttttcttctttagaattagaagaatt	CRISPR spacer
atcttcttctttagaaccagaagaatg	Protospacer
 *.*************..********

20. spacer 1.4|239709|27|CP029011|CRISPRCasFinder matches to NC_028820 (Yersinia phage vB_YenM_TG1, complete genome) position: , mismatch: 5, identity: 0.815

cttttcttctttagaattagaagaatt	CRISPR spacer
atcttcttctttagaaccagaagaatg	Protospacer
 *.*************..********

21. spacer 1.9|239710|28|CP029011|CRT matches to MN694510 (Marine virus AFVG_250M493, complete genome) position: , mismatch: 5, identity: 0.821

ttttcttctttagaattagaagaattat	CRISPR spacer
atttcttctttagaattaaacgaacttt	Protospacer
 *****************.* ***.* *

22. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP028867 (Borreliella garinii strain 20047 plasmid cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
gagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

23. spacer 1.10|239764|28|CP029011|CRT matches to MK358448 (Vibrio phage 5, complete genome) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
tattttaattattttgatttagagctta	Protospacer
***************.******.  **

24. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP009060 (Borreliella afzelii K78 plasmid cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
aagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

25. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP018750 (Borreliella garinii strain CIP 103362 isolate 20047 plasmid cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
gagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

26. spacer 1.10|239764|28|CP029011|CRT matches to NC_018983 (Borrelia burgdorferi 297 plasmid 297_cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
aagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

27. spacer 1.10|239764|28|CP029011|CRT matches to NC_017401 (Borreliella burgdorferi N40 plasmid N40_cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
aagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

28. spacer 1.10|239764|28|CP029011|CRT matches to NC_017395 (Borreliella burgdorferi JD1 plasmid JD1 cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
aagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

29. spacer 1.10|239764|28|CP029011|CRT matches to NC_015907 (Borreliella bissettii DN127 plasmid cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
aagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

30. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP031398 (Borreliella burgdorferi strain MM1 plasmid plsm_cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
aagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

31. spacer 1.10|239764|28|CP029011|CRT matches to NC_011724 (Borreliella burgdorferi ZS7 plasmid ZS7_cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
aagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

32. spacer 1.10|239764|28|CP029011|CRT matches to NC_001903 (Borreliella burgdorferi B31 plasmid cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
aagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

33. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP019755 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
aagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

34. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP015797 (Borrelia mayonii strain MN14-1539 plasmid cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
aagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

35. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP017202 (Borreliella burgdorferi strain B331 plasmid B331_cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
aagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

36. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP009213 (Borreliella afzelii Tom3107 plasmid cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
aagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

37. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP015781 (Borrelia mayonii strain MN14-1420 plasmid cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
aagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

38. spacer 1.10|239764|28|CP029011|CRT matches to NC_017725 (Borreliella garinii BgVir plasmid cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
gagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

39. spacer 1.10|239764|28|CP029011|CRT matches to NC_006128 (Borreliella bavariensis PBi plasmid cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
gagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

40. spacer 1.10|239764|28|CP029011|CRT matches to NC_019225 (Borrelia burgdorferi plasmid cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
aagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

41. spacer 1.10|239764|28|CP029011|CRT matches to NC_017229 (Borreliella afzelii PKo plasmid cp26, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
aagcttaattatttcaatataggtattt	Protospacer
 * .**********.*** *********

42. spacer 1.10|239764|28|CP029011|CRT matches to MN694811 (Marine virus AFVG_250M587, complete genome) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
aactttaattattttaaattaggtaata	Protospacer
 *.************** ******* *

43. spacer 1.10|239764|28|CP029011|CRT matches to KJ473422 (Acinetobacter phage vB_AbaM_Acibel004, complete genome) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
tattttaagtattataatttaggtgtga	Protospacer
******** **** **********.*

44. spacer 1.10|239764|28|CP029011|CRT matches to MK905543 (Vibrio phage USC-1, complete genome) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
tattttaattattttgatttagagctta	Protospacer
***************.******.  **

45. spacer 1.10|239764|28|CP029011|CRT matches to NZ_KX880944 (Escherichia coli strain pMCR-1-P3 plasmid pMCR-1-P3, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
gattttcattattttaacttaggttatt	Protospacer
 ***** **********.******  **

46. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP026938 (Escherichia coli strain CFS3292 plasmid pCFS3292-3, complete sequence) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
gatttttattattttaacttaggttgtt	Protospacer
 ***** **********.******  **

47. spacer 1.10|239764|28|CP029011|CRT matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
ttttttaattattttaatatagataaat	Protospacer
* **************** ***.**  *

48. spacer 1.10|239764|28|CP029011|CRT matches to MF431726 (Vibrio phage vB_ValP_IME271, complete genome) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
tattttaattatttttatttatttttat	Protospacer
*************** *****  * * *

49. spacer 1.10|239764|28|CP029011|CRT matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
ttttttaattattttaatatagataaat	Protospacer
* **************** ***.**  *

50. spacer 1.10|239764|28|CP029011|CRT matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
ttttttaattattttaatatagataaat	Protospacer
* **************** ***.**  *

51. spacer 1.10|239764|28|CP029011|CRT matches to MN850584 (Escherichia phage arall, complete genome) position: , mismatch: 5, identity: 0.821

tattttaattattttaatttaggtattt	CRISPR spacer
ttttaaaatttttttaatttaggtattg	Protospacer
* **  **** ****************

52. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to NC_011247 (Borrelia duttonii Ly plasmid pl165, complete sequence) position: , mismatch: 6, identity: 0.8

agtaattttaaaattaaaacaagattataa	CRISPR spacer
cttaattttaaaattaaaataatattatct	Protospacer
  *****************.** *****

53. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to NZ_CP038502 (Acinetobacter baumannii strain CIAT758 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

agtaattttaaaattaaaacaagattataa	CRISPR spacer
cataattttaaaattaaaaaaatattttta	Protospacer
 .***************** ** *** * *

54. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to MT375529 (Pelagibacter phage Kolga EXVC01, complete genome) position: , mismatch: 6, identity: 0.8

agtaattttaaaattaaaacaagattataa	CRISPR spacer
tgaatttacaaaattaaaacaagataataa	Protospacer
 * * ** .**************** ****

55. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to KY065457 (Streptococcus phage IPP16, complete genome) position: , mismatch: 6, identity: 0.8

agtaattttaaaattaaaacaagattataa	CRISPR spacer
agctattttaaaattaaaaaaagcttacga	Protospacer
**. *************** *** ***..*

56. spacer 1.4|239709|27|CP029011|CRISPRCasFinder matches to NC_022603 (Carnobacterium inhibens subsp. gilichinskyi plasmid pWNCR64, complete sequence) position: , mismatch: 6, identity: 0.778

cttttcttctttagaattagaagaatt	CRISPR spacer
cttttcttctttagaactagattgacc	Protospacer
****************.****  .*..

57. spacer 1.9|239710|28|CP029011|CRT matches to MF001355 (Proteus phage PM2, partial genome) position: , mismatch: 6, identity: 0.786

ttttcttctttagaattagaagaattat	CRISPR spacer
tcatcttctttagaattagaagagtgcc	Protospacer
*. ********************.*  .

58. spacer 1.9|239710|28|CP029011|CRT matches to KP890823 (Proteus phage vB_PmiM_Pm5461, complete genome) position: , mismatch: 6, identity: 0.786

ttttcttctttagaattagaagaattat	CRISPR spacer
tcatcttctttagaattagaagagtgcc	Protospacer
*. ********************.*  .

59. spacer 1.9|239710|28|CP029011|CRT matches to KT264824 (Gokushovirus WZ-2015a isolate 76Mky15, complete genome) position: , mismatch: 6, identity: 0.786

ttttcttctttagaattagaagaattat	CRISPR spacer
ttttcttctttagaattaaaaacctgct	Protospacer
******************.**.  *  *

60. spacer 1.9|239710|28|CP029011|CRT matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 6, identity: 0.786

ttttcttctttagaattagaagaattat	CRISPR spacer
ataccttctgtagtattagaagaattag	Protospacer
 * .***** *** *************

61. spacer 1.9|239710|28|CP029011|CRT matches to KY593455 (Yersinia phage fHe-Yen9-01, complete genome) position: , mismatch: 6, identity: 0.786

ttttcttctttagaattagaagaattat	CRISPR spacer
tcttcttctttagaaccagaagaatgcc	Protospacer
*.*************..********  .

62. spacer 1.9|239710|28|CP029011|CRT matches to NC_019909 (Yersinia phage phiR1-RT complete genome) position: , mismatch: 6, identity: 0.786

ttttcttctttagaattagaagaattat	CRISPR spacer
tcttcttctttagaaccagaagaatgcc	Protospacer
*.*************..********  .

63. spacer 1.9|239710|28|CP029011|CRT matches to NC_028820 (Yersinia phage vB_YenM_TG1, complete genome) position: , mismatch: 6, identity: 0.786

ttttcttctttagaattagaagaattat	CRISPR spacer
tcttcttctttagaaccagaagaatgcc	Protospacer
*.*************..********  .

64. spacer 1.10|239764|28|CP029011|CRT matches to KT997868 (Uncultured Mediterranean phage uvDeep-CGR2-KM24-C165, complete genome) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
acaaataattattttaatgtaggtattt	Protospacer
     ************* *********

65. spacer 1.10|239764|28|CP029011|CRT matches to LT960552 (Yersinia phage fHe-Yen9-03 genome assembly, complete genome: monopartite) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
aattttaattattttattataggtacac	Protospacer
 *************** * ******. .

66. spacer 1.10|239764|28|CP029011|CRT matches to LR596615 (Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
aattttaattattttattataggtacac	Protospacer
 *************** * ******. .

67. spacer 1.10|239764|28|CP029011|CRT matches to NC_042116 (Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
aattttaattattttattataggtacac	Protospacer
 *************** * ******. .

68. spacer 1.10|239764|28|CP029011|CRT matches to MN562221 (Photobacterium phage PDCC-1, complete genome) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
tattttaattattttgatttagagttaa	Protospacer
***************.******.  *

69. spacer 1.10|239764|28|CP029011|CRT matches to NZ_KJ776585 (Clostridium botulinum strain DB2 plasmid pDB2, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
aagtttaattattttaattaagttatcc	Protospacer
 * **************** ** ***..

70. spacer 1.10|239764|28|CP029011|CRT matches to NZ_KJ776583 (Clostridium botulinum strain KapchunkaB3 plasmid pKAPB3, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
aagtttaattattttaattaagttatcc	Protospacer
 * **************** ** ***..

71. spacer 1.10|239764|28|CP029011|CRT matches to NZ_KJ776576 (Clostridium botulinum strain Eklund2B plasmid pEklund2B, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
aagtttaattattttaattaagttatcc	Protospacer
 * **************** ** ***..

72. spacer 1.10|239764|28|CP029011|CRT matches to NZ_KJ776579 (Clostridium botulinum strain KapchunkaB2 plasmid pKAPB2, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
aagtttaattattttaattaagttatcc	Protospacer
 * **************** ** ***..

73. spacer 1.10|239764|28|CP029011|CRT matches to NC_018653 (Clostridium botulinum B str. Eklund 17B (NRP) plasmid p17BNRP, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
aagtttaattattttaattaagttatcc	Protospacer
 * **************** ** ***..

74. spacer 1.10|239764|28|CP029011|CRT matches to NC_010680 (Clostridium botulinum B str. Eklund 17B (NRP) plasmid pCLL, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
aagtttaattattttaattaagttatcc	Protospacer
 * **************** ** ***..

75. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP028164 (Staphylococcus aureus strain CFSAN064038 plasmid pGMI17-006, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
tattttaattatattaatttaaaaggtt	Protospacer
************ ********.. . **

76. spacer 1.10|239764|28|CP029011|CRT matches to NC_013377 (Staphylococcus epidermidis plasmid SAP105A, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
cttcttaagtattttattttaggtatta	Protospacer
. *.**** ******* **********

77. spacer 1.10|239764|28|CP029011|CRT matches to KJ936628 (Vibrio phage VPp1, complete genome) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
tattttaattatttttatttatccttat	Protospacer
*************** *****  . * *

78. spacer 1.10|239764|28|CP029011|CRT matches to MK483107 (Vibrio phage vB_VpP_BA6, complete genome) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
tattttaattatttttatttatccttat	Protospacer
*************** *****  . * *

79. spacer 1.10|239764|28|CP029011|CRT matches to NZ_KX520649 (Staphylococcus epidermidis strain 14-01514 plasmid p14-01514, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
tattttaattatattaatttaaaaggtt	Protospacer
************ ********.. . **

80. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP024036 (Bacillus aryabhattai strain K13 plasmid unnamed1) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
tattttaattattttaacttatattata	Protospacer
*****************.*** .*  *

81. spacer 1.10|239764|28|CP029011|CRT matches to NZ_KM521837 (Staphylococcus epidermidis strain 12-02300 plasmid p12-02300, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
tattttaattatattaatttaaaaggtt	Protospacer
************ ********.. . **

82. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP007658 (Staphylococcus aureus strain V2200 plasmid pV2200, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
cttcttaagtattttattttaggtatta	Protospacer
. *.**** ******* **********

83. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP017683 (Staphylococcus aureus strain CFSAN007850 plasmid pCFSAN007850, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
cttcttaagtattttattttaggtatta	Protospacer
. *.**** ******* **********

84. spacer 1.10|239764|28|CP029011|CRT matches to NC_013331 (Staphylococcus aureus plasmid SAP047A, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
cttcttaagtattttattttaggtatta	Protospacer
. *.**** ******* **********

85. spacer 1.10|239764|28|CP029011|CRT matches to CP030480 (Staphylococcus aureus strain ER04246.3 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
cttcttaagtattttattttaggtatta	Protospacer
. *.**** ******* **********

86. spacer 1.10|239764|28|CP029011|CRT matches to MK992500 (Staphylococcus aureus strain 5Sau489 plasmid p5Sau489, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
cttcttaagtattttattttaggtatta	Protospacer
. *.**** ******* **********

87. spacer 1.10|239764|28|CP029011|CRT matches to MK992499 (Staphylococcus aureus strain 17Sau58 plasmid p17Sau58, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
cttcttaagtattttattttaggtatta	Protospacer
. *.**** ******* **********

88. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP040561 (Staphylococcus aureus strain Col52-A5 plasmid pCOL52-A5, complete sequence) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
cttcttaagtattttattttaggtatta	Protospacer
. *.**** ******* **********

89. spacer 1.10|239764|28|CP029011|CRT matches to MH779519 (Lactococcus phage vB_LLc_bIBB14, complete genome) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
ctttttaattactttattttaggtaata	Protospacer
. *********.**** ******** *

90. spacer 1.10|239764|28|CP029011|CRT matches to MT074141 (Bacteroides phage DAC22, complete genome) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
tattttaattagtttaatttattcttat	Protospacer
*********** *********  . * *

91. spacer 1.10|239764|28|CP029011|CRT matches to MH779520 (Lactococcus phage vB_Llc_bIBB27, complete genome) position: , mismatch: 6, identity: 0.786

tattttaattattttaatttaggtattt	CRISPR spacer
ctttttaattactttattttaggtaata	Protospacer
. *********.**** ******** *

92. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to CP024686 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence) position: , mismatch: 7, identity: 0.767

agtaattttaaaattaaaacaagattataa	CRISPR spacer
gttaatttcaaaattaaaacaagagcaata	Protospacer
. ******.*************** .*  *

93. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to MN693184 (Marine virus AFVG_25M66, complete genome) position: , mismatch: 7, identity: 0.767

agtaattttaaaattaaaacaagattataa	CRISPR spacer
aaagtttttaaaattaaatcaaaattatat	Protospacer
*. . ************* ***.******

94. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to NZ_CP021282 (Legionella pneumophila subsp. pneumophila strain Flint 2 (D-7477) plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

agtaattttaaaattaaaacaagattataa	CRISPR spacer
attaatttttaaattaaaccaagataacgt	Protospacer
* ******* ******** ****** *..

95. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to NZ_CP016031 (Legionella pneumophila strain OLDA plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

agtaattttaaaattaaaacaagattataa	CRISPR spacer
attaatttttaaattaaaccaagataacgt	Protospacer
* ******* ******** ****** *..

96. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to AP014020 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C109A-MedDCM-OCT-S27-C18, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

agtaattttaaaattaaaacaagattataa	CRISPR spacer
aggaactttaaaattaaaacaaggagaaga	Protospacer
** **.*****************.  * .*

97. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to AP014021 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C109A-MedDCM-OCT-S44-C26, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

agtaattttaaaattaaaacaagattataa	CRISPR spacer
aggaactttaaaattaaaacaaggagaaga	Protospacer
** **.*****************.  * .*

98. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to NZ_LT598658 (Legionella pneumophila strain Lpm7613 isolate Lpm7613 plasmid 2) position: , mismatch: 7, identity: 0.767

agtaattttaaaattaaaacaagattataa	CRISPR spacer
attaatttttaaattaaaccaagataacgt	Protospacer
* ******* ******** ****** *..

99. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to NZ_LN681226 (Legionella hackeliae strain ATCC 35250 plasmid II, complete sequence) position: , mismatch: 7, identity: 0.767

agtaattttaaaattaaaacaagattataa	CRISPR spacer
attaatttttaaattaaaccaagataacgt	Protospacer
* ******* ******** ****** *..

100. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to NZ_CP021287 (Legionella pneumophila subsp. pneumophila strain Albuquerque 1 (D-7474) plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

agtaattttaaaattaaaacaagattataa	CRISPR spacer
attaatttttaaattaaaccaagataacgt	Protospacer
* ******* ******** ****** *..

101. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to NC_006365 (Legionella pneumophila str. Paris plasmid pLPP, complete sequence) position: , mismatch: 7, identity: 0.767

agtaattttaaaattaaaacaagattataa	CRISPR spacer
attaatttttaaattaaaccaagataacgt	Protospacer
* ******* ******** ****** *..

102. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to NZ_MG205641 (Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence) position: , mismatch: 7, identity: 0.767

agtaattttaaaattaaaacaagattataa	CRISPR spacer
aaaaattttaaaattaaaagaagaaggcaa	Protospacer
*. **************** ****  ..**

103. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to NZ_MG205643 (Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence) position: , mismatch: 7, identity: 0.767

agtaattttaaaattaaaacaagattataa	CRISPR spacer
aaaaattttaaaattaaaagaagagggcaa	Protospacer
*. **************** ****  ..**

104. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to NZ_MG205642 (Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence) position: , mismatch: 7, identity: 0.767

agtaattttaaaattaaaacaagattataa	CRISPR spacer
aaaaattttaaaattaaaagaagaaggcaa	Protospacer
*. **************** ****  ..**

105. spacer 1.9|239710|28|CP029011|CRT matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 7, identity: 0.75

ttttcttctttagaattagaagaattat	CRISPR spacer
gtttcttctttagaatcagaaaaacctg	Protospacer
 ***************.****.**..

106. spacer 1.9|239710|28|CP029011|CRT matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 7, identity: 0.75

ttttcttctttagaattagaagaattat	CRISPR spacer
gtttcttctttagaatcagaaaaacctg	Protospacer
 ***************.****.**..

107. spacer 1.9|239710|28|CP029011|CRT matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 7, identity: 0.75

ttttcttctttagaattagaagaattat	CRISPR spacer
gtttcttctttagaatcagaaaaacctg	Protospacer
 ***************.****.**..

108. spacer 1.9|239710|28|CP029011|CRT matches to NC_013509 (Edwardsiella tarda EIB202 plasmid pEIB202, complete sequence) position: , mismatch: 7, identity: 0.75

ttttcttctttagaattagaagaattat	CRISPR spacer
gtttcttctttagaatcagaaaaacctg	Protospacer
 ***************.****.**..

109. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP014149 (Paeniclostridium sordellii strain AM370 plasmid pRSJ16_1, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
accgataattattttaatttaggtactg	Protospacer
  .  ********************.*

110. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****.*.. .

111. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP010112 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****.*.. .

112. spacer 1.10|239764|28|CP029011|CRT matches to CP024686 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****.*.. .

113. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP015730 (Bacillus cereus strain A1 plasmid pBCA1, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****.*.. .

114. spacer 1.10|239764|28|CP029011|CRT matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****.*.. .

115. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP016590 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-02, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****.*.. .

116. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****.*.. .

117. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP016596 (Bacillus cereus strain K8 plasmid pBCM301, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****.*.. .

118. spacer 1.10|239764|28|CP029011|CRT matches to NC_010180 (Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****.*.. .

119. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP013682 (Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
ttattaaattattttaatttaggttcaa	Protospacer
*  ** ****************** .

120. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP013276 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-1-360K, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****.*.. .

121. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP043831 (Bacillus sp. BS98 plasmid unnamed1) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****.*.. .

122. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP039722 (Bacillus thuringiensis strain BT-59 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****.*.. .

123. spacer 1.10|239764|28|CP029011|CRT matches to NC_018689 (Bacillus thuringiensis MC28 plasmid pMC429, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****.*.. .

124. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP045608 (Bacillus cereus strain SB1 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****.*.. .

125. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP009639 (Bacillus cereus 03BB108 plasmid pBFI_1, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
cggggtaatttttttaatttaggcattt	Protospacer
..   ***** ************.****

126. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP009349 (Bacillus thuringiensis HD1002 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****.*.. .

127. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP013295 (Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
ttattaaattattttaatttaggttcaa	Protospacer
*  ** ****************** .

128. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP045023 (Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****.*.. .

129. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP018741 (Bacillus cereus strain FORC_047 plasmid pFORC47_1, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gattttaattattttaagttagatgcac	Protospacer
 **************** ****.*.. .

130. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP053963 (Bacillus cereus strain FDAARGOS_802 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
cggggtaatttttttaatttaggcattt	Protospacer
..   ***** ************.****

131. spacer 1.10|239764|28|CP029011|CRT matches to MN693222 (Marine virus AFVG_25M67, complete genome) position: , mismatch: 7, identity: 0.75

tattttaattattttaatttaggtattt	CRISPR spacer
gctattaattgttttaatttaggtacgg	Protospacer
  * ******.**************.

132. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to MN693386 (Marine virus AFVG_25M538, complete genome) position: , mismatch: 8, identity: 0.733

agtaattttaaaattaaaacaagattataa	CRISPR spacer
gttaattttaaaattaaatctagatggttt	Protospacer
. **************** * **** .*

133. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to MN693115 (Marine virus AFVG_25M537, complete genome) position: , mismatch: 8, identity: 0.733

agtaattttaaaattaaaacaagattataa	CRISPR spacer
gttaattttaaaattaaatctagatggttt	Protospacer
. **************** * **** .*

134. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to NZ_CP007231 (Yersinia similis strain Y_sim_228 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

agtaattttaaaattaaaacaagattataa	CRISPR spacer
tatcattttaatattaaaacaatattaatt	Protospacer
 .* ******* ********** ****

135. spacer 1.10|239764|28|CP029011|CRT matches to NZ_CP028889 (Borrelia turcica IST7 plasmid lp35, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttaggtattt	CRISPR spacer
catttttattattttaatttagtagaga	Protospacer
.***** ***************  .

136. spacer 1.10|239764|28|CP029011|CRT matches to NC_018688 (Bacillus thuringiensis MC28 plasmid pMC319, complete sequence) position: , mismatch: 8, identity: 0.714

tattttaattattttaatttaggtattt	CRISPR spacer
tattttaatttttttaatttatactccg	Protospacer
********** ********** .. ..

137. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 9, identity: 0.7

agtaattttaaaattaaaacaagattataa	CRISPR spacer
caaggttttaaaaataaaacaagatcattt	Protospacer
 . ..******** ***********.**

138. spacer 1.1|239562|30|CP029011|CRISPRCasFinder matches to NZ_CP040855 (Lactobacillus johnsonii strain G2A plasmid unnamed1) position: , mismatch: 9, identity: 0.7

agtaattttaaaattaaaacaagattataa	CRISPR spacer
ttttgttttaaaattaaaaaaagattcagt	Protospacer
  * .************** ******  .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP029011

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection