CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP029010	Candidatus Sulcia muelleri isolate SMCRYFAC chromosome, complete genome	1 crisprs	NA	1	4	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP029010_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029010_1

236840-237283

Orphan

Consensus_repeat	Method
AAAAANTNTNAATNAATTNAAAANANNNNN	CRT

8 spacers

The CRISPR arrays of CP029010_1

>merge|CP029010|1|236840-237283|CRT
AAAAAGTAATTTTAAAATTAAAACAAGATTATAATTTAAATAAATTAAAAATTTTTAATAAATTGAAAATAAAGGCTAATTTAGATAAATTAAAAATTTTTAATAAATTGAAACTAAATTCTAATTTAGAGAAATTAAAAATTTTAAATAAATTGAAAAACTTTTCTTCTTTAGAATTAGAAAAAGAAAAATTAAAAATTTTTAATAAATTGAAAAAATATTTTAATTATTTTAATTTAGGGATTTTAAAAAATTTTAATAAATTTAAAAAATGTTCGAAGTTAGAGAGATTAAAAATTTTTAATCAATTGAAAAAAAGTTTTAATTTATCTAATATAAAAGAAACTAAACTAAATTAAATTAAAAAAAAATGTCAATTAAAAAAAAAAAACCGATGACTTCAAGTCAAAGATTCAAAATAATAAATTCATTTAAAGAAATTAC

>CP029010|1|1|236840-237283|CRT
AAAAAGTAATTTTAAAATTAAAACA	AGATTATAATTTAAATAAATT
AAAAATTTTTAATAAATTGAAAATA	AAGGCTAATTTAGATAAATT
AAAAATTTTTAATAAATTGAAACTA	AATTCTAATTTAGAGAAATT
AAAAATTTTAAATAAATTGAAAAAC	TTTTCTTCTTTAGAATTAGAAAAAGAAAAATT
AAAAATTTTTAATAAATTGAAAAAA	TATTTTAATTATTTTAATTTAGGGATTTT
AAAAAATTTTAATAAATTTAAAAAA	TGTTCGAAGTTAGAGAGATT
AAAAATTTTTAATCAATTGAAAAAA	AGTTTTAATTTATCTAATATAAAAGAAACTAAACTAAATTAAATTAAA
AAAAAATGTCAATTAAAAAAAAAAA	ACCGATGACTTCAAGTCAAAGATTCAAAA
TAATAAATTCATTTAAAGAAATTAC

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP029010_1	1.3\|236956\|20\|CP029010\|CRT	236956-236975	20	CP029010.1	126906-126925	2	0.9

1. spacer 1.3|236956|20|CP029010|CRT matches to position: 126906-126925, mismatch: 2, identity: 0.9

aattctaatttagagaaatt	CRISPR spacer
aattcaaatttagataaatt	Protospacer
***** ******** *****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP029010_1	1.1\|236865\|21\|CP029010\|CRT	236865-236885	21	NC_005703	Bacillus mycoides pBMY1 plasmid	2930-2950	1	0.952
CP029010_1	1.1\|236865\|21\|CP029010\|CRT	236865-236885	21	NZ_AP018564	Staphylococcus argenteus strain 58113 plasmid p2, complete sequence	59281-59301	2	0.905
CP029010_1	1.1\|236865\|21\|CP029010\|CRT	236865-236885	21	NZ_CP010112	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence	100728-100748	2	0.905
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	96875-96903	4	0.862
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NC_011258	Borrelia recurrentis A1 plasmid pl37, complete sequence	1904-1932	5	0.828
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NC_011224	Borrelia duttonii Ly plasmid pl11, complete sequence	1805-1833	5	0.828
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP024036	Bacillus aryabhattai strain K13 plasmid unnamed1	110678-110706	5	0.828
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	MN562221	Photobacterium phage PDCC-1, complete genome	121794-121822	6	0.793
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP028164	Staphylococcus aureus strain CFSAN064038 plasmid pGMI17-006, complete sequence	43407-43435	6	0.793
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	KJ936628	Vibrio phage VPp1, complete genome	30937-30965	6	0.793
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	MF431726	Vibrio phage vB_ValP_IME271, complete genome	297-325	6	0.793
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	MK483107	Vibrio phage vB_VpP_BA6, complete genome	332-360	6	0.793
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_KX520649	Staphylococcus epidermidis strain 14-01514 plasmid p14-01514, complete sequence	22844-22872	6	0.793
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_KM521837	Staphylococcus epidermidis strain 12-02300 plasmid p12-02300, complete sequence	21903-21931	6	0.793
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	MT074141	Bacteroides phage DAC22, complete genome	79119-79147	6	0.793
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	MN693197	Marine virus AFVG_25M502, complete genome	22497-22528	7	0.781
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	KT997868	Uncultured Mediterranean phage uvDeep-CGR2-KM24-C165, complete genome	16369-16397	7	0.759
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	CP019152	Acinetobacter lwoffii strain ZS207 plasmid pZS-2, complete sequence	10419-10447	7	0.759
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP028889	Borrelia turcica IST7 plasmid lp35, complete sequence	20750-20778	7	0.759
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	KJ473422	Acinetobacter phage vB_AbaM_Acibel004, complete genome	17165-17193	7	0.759
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	HE806280	Acinetobacter bacteriophage AP22, complete genome	3506-3534	7	0.759
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	KM983334	Clostridium phage phiCTC2B, complete genome	18202-18233	8	0.75
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	KM983331	Clostridium phage phiCT19406B, complete genome	18202-18233	8	0.75
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NC_014749	Calditerrivibrio nitroreducens DSM 19672 plasmid pCALNI01, complete sequence	3112-3143	8	0.75
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	MT774396	CrAssphage cr53_1, complete genome	80705-80736	8	0.75
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NC_017210	Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT6880, complete sequence	444-475	8	0.75
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NC_018883	Bacillus thuringiensis Bt407 plasmid BTB_6p, complete sequence	5159-5190	8	0.75
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_CP031220	Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence	21422-21453	8	0.75
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_CP031220	Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence	55800-55831	8	0.75
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NC_020390	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-6, complete sequence	2972-3003	8	0.75
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	90284-90315	8	0.75
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	AP014124	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C41-MedDCM-OCT-S34-C48, * SEQUENCING IN PROGRESS *	26475-26506	8	0.75
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	MN270263	Streptococcus phage phi-SsuFJSM5_rum, complete genome	19680-19711	8	0.75
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	MN270264	Streptococcus phage phi-SsuFJSM7_rum, complete genome	19680-19711	8	0.75
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP013709	Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence	138968-138996	8	0.724
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NC_018688	Bacillus thuringiensis MC28 plasmid pMC319, complete sequence	128909-128937	8	0.724
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP009639	Bacillus cereus 03BB108 plasmid pBFI_1, complete sequence	219808-219836	8	0.724
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP015630	Borrelia turicatae strain BTE5EL plasmid lp159	152284-152312	8	0.724
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP013844	Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence	184405-184433	8	0.724
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP053963	Bacillus cereus strain FDAARGOS_802 plasmid unnamed3, complete sequence	261392-261420	8	0.724
CP029010_1	1.8\|237230\|29\|CP029010\|CRT	237230-237258	29	MK568540	Vibrio phage ValB1 HC, complete genome	179184-179212	8	0.724
CP029010_1	1.8\|237230\|29\|CP029010\|CRT	237230-237258	29	KP671755	Vibrio phage ValKK3, complete genome	233628-233656	8	0.724
CP029010_1	1.8\|237230\|29\|CP029010\|CRT	237230-237258	29	MT612989	Vibrio phage vB_ValM_R11Z, complete genome	198140-198168	8	0.724
CP029010_1	1.8\|237230\|29\|CP029010\|CRT	237230-237258	29	MT612988	Vibrio phage vB_ValM_R10Z, complete genome	199204-199232	8	0.724
CP029010_1	1.8\|237230\|29\|CP029010\|CRT	237230-237258	29	KT919973	Vibrio phage phi-ST2, complete genome	68959-68987	8	0.724
CP029010_1	1.8\|237230\|29\|CP029010\|CRT	237230-237258	29	NC_023568	Vibrio phage VH7D, complete genome	81656-81684	8	0.724
CP029010_1	1.8\|237230\|29\|CP029010\|CRT	237230-237258	29	KT919972	Vibrio phage phi-Grn1, complete genome	7981-8009	8	0.724
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	6590-6621	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	16268-16299	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	16268-16299	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NC_013509	Edwardsiella tarda EIB202 plasmid pEIB202, complete sequence	20936-20967	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_KX258624	Bacillus thuringiensis strain INTA Fr7-4 plasmid pFR260, complete sequence	108675-108706	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_CP014284	Bacillus thuringiensis strain Bt185 plasmid pBT1850294, complete sequence	225291-225322	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_CP010578	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence	34319-34350	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_CP010579	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB92, complete sequence	62557-62588	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_CP015177	Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence	73414-73445	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_CP026554	Citrobacter sp. SL156 plasmid unnamed5	2484-2515	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_CP013709	Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence	30001-30032	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_CP013682	Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence	34323-34354	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_CP032609	Bacillus thuringiensis strain QZL38 plasmid p.2, complete sequence	19132-19163	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	CP052530	Klebsiella pneumoniae strain B16KP0177 plasmid pB16KP0177-6, complete sequence	999-1030	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	231066-231097	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_CP013295	Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence	45039-45070	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_CP013844	Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence	65486-65517	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	KT337346	Streptococcus phage phiARI0285-2, partial genome	28340-28371	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	MN693779	Marine virus AFVG_250M346, complete genome	2730-2761	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	FR671409	Streptococcus phage 11865	26857-26888	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	KY065503	Streptococcus phage IPP67, complete genome	6105-6136	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	KT337372	Streptococcus phage phiARI0995b, partial genome	23609-23640	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	KY065481	Streptococcus phage IPP41, complete genome	6584-6615	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	KY065453	Streptococcus phage IPP11, complete genome	6997-7028	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	KY065504	Streptococcus phage IPP68, complete genome	6105-6136	9	0.719
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	KT337342	Streptococcus phage phiARI0131-2, complete genome	27622-27653	9	0.719
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	499869-499897	9	0.69
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP010112	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence	169741-169769	9	0.69
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	CP024686	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence	269840-269868	9	0.69
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP015730	Bacillus cereus strain A1 plasmid pBCA1, complete sequence	105194-105222	9	0.69
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	73987-74015	9	0.69
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP016590	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-02, complete sequence	243494-243522	9	0.69
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP012100	Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence	388678-388706	9	0.69
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP016596	Bacillus cereus strain K8 plasmid pBCM301, complete sequence	288657-288685	9	0.69
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NC_010180	Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence	46247-46275	9	0.69
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP013276	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-1-360K, complete sequence	67838-67866	9	0.69
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP043831	Bacillus sp. BS98 plasmid unnamed1	271309-271337	9	0.69
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP039722	Bacillus thuringiensis strain BT-59 plasmid p1, complete sequence	205182-205210	9	0.69
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NC_018689	Bacillus thuringiensis MC28 plasmid pMC429, complete sequence	328083-328111	9	0.69
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP045608	Bacillus cereus strain SB1 plasmid p2, complete sequence	239915-239943	9	0.69
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP009349	Bacillus thuringiensis HD1002 plasmid 1, complete sequence	143838-143866	9	0.69
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP045023	Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence	67839-67867	9	0.69
CP029010_1	1.5\|237058\|29\|CP029010\|CRT	237058-237086	29	NZ_CP018741	Bacillus cereus strain FORC_047 plasmid pFORC47_1, complete sequence	169583-169611	9	0.69
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	AP022647	Bacillus wiedmannii PL1 plasmid pBwiPL1-4 DNA, complete sequence	4741-4772	10	0.688
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NC_013317	Enterococcus faecium plasmid p5753cA, complete sequence	8114-8145	10	0.688
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	NZ_LR214994	Mycoplasma hyopneumoniae strain NCTC10127 plasmid 3	8373-8404	10	0.688
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	LR588166	Pseudomonas phage vB_PaeM_MIJ3	34026-34057	10	0.688
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	MH121069	Pseudomonas phage vB_PaeM_PA5oct, complete genome	150557-150588	10	0.688
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	MN694146	Marine virus AFVG_250M723, complete genome	22308-22339	10	0.688
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	JN638751	Bacillus phage G, complete genome	96742-96773	10	0.688
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	MN698239	Pelagibacter phage HTVC023P, complete genome	53161-53192	11	0.656
CP029010_1	1.4\|237001\|32\|CP029010\|CRT	237001-237032	32	AP014256	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S25-C192, * SEQUENCING IN PROGRESS *	7031-7062	11	0.656

1. spacer 1.1|236865|21|CP029010|CRT matches to NC_005703 (Bacillus mycoides pBMY1 plasmid) position: , mismatch: 1, identity: 0.952

agattataatttaaataaatt	CRISPR spacer
agtttataatttaaataaatt	Protospacer
** ******************

2. spacer 1.1|236865|21|CP029010|CRT matches to NZ_AP018564 (Staphylococcus argenteus strain 58113 plasmid p2, complete sequence) position: , mismatch: 2, identity: 0.905

agattataatttaaataaatt	CRISPR spacer
gtattataatttaaataaatt	Protospacer
. *******************

3. spacer 1.1|236865|21|CP029010|CRT matches to NZ_CP010112 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence) position: , mismatch: 2, identity: 0.905

agattataatttaaataaatt	CRISPR spacer
ttattataatttaaataaatt	Protospacer
  *******************

4. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 4, identity: 0.862

tattttaattattttaatttagggatttt	CRISPR spacer
tatttttattagtttaatttagggatggt	Protospacer
****** **** **************  *

5. spacer 1.5|237058|29|CP029010|CRT matches to NC_011258 (Borrelia recurrentis A1 plasmid pl37, complete sequence) position: , mismatch: 5, identity: 0.828

tattttaattattttaatttag---ggatttt	CRISPR spacer
tattttaattattttaatatagtttgaat---	Protospacer
****************** ***   *.**

6. spacer 1.5|237058|29|CP029010|CRT matches to NC_011224 (Borrelia duttonii Ly plasmid pl11, complete sequence) position: , mismatch: 5, identity: 0.828

tattttaattattttaatttag---ggatttt	CRISPR spacer
tattttaattattttaatatagtttgaat---	Protospacer
****************** ***   *.**

7. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP024036 (Bacillus aryabhattai strain K13 plasmid unnamed1) position: , mismatch: 5, identity: 0.828

tattttaattattttaatttagggatttt--	CRISPR spacer
tattttaattattttaactta--tattatag	Protospacer
*****************.***   *** *

8. spacer 1.5|237058|29|CP029010|CRT matches to MN562221 (Photobacterium phage PDCC-1, complete genome) position: , mismatch: 6, identity: 0.793

tattttaattattttaatttagggatttt	CRISPR spacer
tattttaattattttgatttagagttaac	Protospacer
***************.******.* *  .

9. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP028164 (Staphylococcus aureus strain CFSAN064038 plasmid pGMI17-006, complete sequence) position: , mismatch: 6, identity: 0.793

tattttaattattttaatttagggatttt	CRISPR spacer
tattttaattatattaatttaaaaggttt	Protospacer
************ ********.... ***

10. spacer 1.5|237058|29|CP029010|CRT matches to KJ936628 (Vibrio phage VPp1, complete genome) position: , mismatch: 6, identity: 0.793

tattttaattattttaatttagggatttt	CRISPR spacer
tattttaattatttttatttatccttatt	Protospacer
*************** *****    * **

11. spacer 1.5|237058|29|CP029010|CRT matches to MF431726 (Vibrio phage vB_ValP_IME271, complete genome) position: , mismatch: 6, identity: 0.793

tattttaattattttaatttagggatttt	CRISPR spacer
tattttaattatttttatttatttttatt	Protospacer
*************** *****    * **

12. spacer 1.5|237058|29|CP029010|CRT matches to MK483107 (Vibrio phage vB_VpP_BA6, complete genome) position: , mismatch: 6, identity: 0.793

tattttaattattttaatttagggatttt	CRISPR spacer
tattttaattatttttatttatccttatt	Protospacer
*************** *****    * **

13. spacer 1.5|237058|29|CP029010|CRT matches to NZ_KX520649 (Staphylococcus epidermidis strain 14-01514 plasmid p14-01514, complete sequence) position: , mismatch: 6, identity: 0.793

tattttaattattttaatttagggatttt	CRISPR spacer
tattttaattatattaatttaaaaggttt	Protospacer
************ ********.... ***

14. spacer 1.5|237058|29|CP029010|CRT matches to NZ_KM521837 (Staphylococcus epidermidis strain 12-02300 plasmid p12-02300, complete sequence) position: , mismatch: 6, identity: 0.793

tattttaattattttaatttagggatttt	CRISPR spacer
tattttaattatattaatttaaaaggttt	Protospacer
************ ********.... ***

15. spacer 1.5|237058|29|CP029010|CRT matches to MT074141 (Bacteroides phage DAC22, complete genome) position: , mismatch: 6, identity: 0.793

tattttaattattttaatttagggatttt	CRISPR spacer
tattttaattagtttaatttattcttatt	Protospacer
*********** *********    * **

16. spacer 1.4|237001|32|CP029010|CRT matches to MN693197 (Marine virus AFVG_25M502, complete genome) position: , mismatch: 7, identity: 0.781

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
tttaaatctttagaattaggaaaagtaaatat	Protospacer
***   *************.***** ***  *

17. spacer 1.5|237058|29|CP029010|CRT matches to KT997868 (Uncultured Mediterranean phage uvDeep-CGR2-KM24-C165, complete genome) position: , mismatch: 7, identity: 0.759

tattttaattattttaatttagggatttt	CRISPR spacer
acaaataattattttaatgtaggtatttt	Protospacer
     ************* **** *****

18. spacer 1.5|237058|29|CP029010|CRT matches to CP019152 (Acinetobacter lwoffii strain ZS207 plasmid pZS-2, complete sequence) position: , mismatch: 7, identity: 0.759

tattttaattattttaatttagggatttt	CRISPR spacer
tattttaattaatttaatttaatatctct	Protospacer
*********** *********. . .*.*

19. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP028889 (Borrelia turcica IST7 plasmid lp35, complete sequence) position: , mismatch: 7, identity: 0.759

tattttaattattttaatttag----ggatttt	CRISPR spacer
catttttattattttaatttagtagagaa----	Protospacer
.***** ***************    *.*

20. spacer 1.5|237058|29|CP029010|CRT matches to KJ473422 (Acinetobacter phage vB_AbaM_Acibel004, complete genome) position: , mismatch: 7, identity: 0.759

tattttaattattttaatttagggatttt	CRISPR spacer
tattttaagtattataatttaggtgtgac	Protospacer
******** **** ********* .*  .

21. spacer 1.5|237058|29|CP029010|CRT matches to HE806280 (Acinetobacter bacteriophage AP22, complete genome) position: , mismatch: 7, identity: 0.759

tattttaattattttaatttagggatttt	CRISPR spacer
aggctaacttattttaatttagggctttt	Protospacer
 . .* * **************** ****

22. spacer 1.4|237001|32|CP029010|CRT matches to KM983334 (Clostridium phage phiCTC2B, complete genome) position: , mismatch: 8, identity: 0.75

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
aacaatgatttagaattagaaaaagcaaaatt	Protospacer
  .  *  ***************** ******

23. spacer 1.4|237001|32|CP029010|CRT matches to KM983331 (Clostridium phage phiCT19406B, complete genome) position: , mismatch: 8, identity: 0.75

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
aacaatgatttagaattagaaaaagcaaaatt	Protospacer
  .  *  ***************** ******

24. spacer 1.4|237001|32|CP029010|CRT matches to NC_014749 (Calditerrivibrio nitroreducens DSM 19672 plasmid pCALNI01, complete sequence) position: , mismatch: 8, identity: 0.75

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
atccaaactttagaagaagaaaaagaaaaatt	Protospacer
 *..   ********  ***************

25. spacer 1.4|237001|32|CP029010|CRT matches to MT774396 (CrAssphage cr53_1, complete genome) position: , mismatch: 8, identity: 0.75

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
gataaaactttagaattagaaaatgataaatt	Protospacer
  *    **************** ** *****

26. spacer 1.4|237001|32|CP029010|CRT matches to NC_017210 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT6880, complete sequence) position: , mismatch: 8, identity: 0.75

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
atacgtgatttagaaatagaaaatgaaaaatt	Protospacer
 * . *  ******* ******* ********

27. spacer 1.4|237001|32|CP029010|CRT matches to NC_018883 (Bacillus thuringiensis Bt407 plasmid BTB_6p, complete sequence) position: , mismatch: 8, identity: 0.75

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
atacgtgatttagaaatagaaaatgaaaaatt	Protospacer
 * . *  ******* ******* ********

28. spacer 1.4|237001|32|CP029010|CRT matches to NZ_CP031220 (Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence) position: , mismatch: 8, identity: 0.75

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
tcgacttctttagaattagtaaaataaatttc	Protospacer
*.  *************** **** ***  *.

29. spacer 1.4|237001|32|CP029010|CRT matches to NZ_CP031220 (Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence) position: , mismatch: 8, identity: 0.75

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
acttcttcttttaaattagaaaaagtatactg	Protospacer
 .********* .************ * * *

30. spacer 1.4|237001|32|CP029010|CRT matches to NC_020390 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-6, complete sequence) position: , mismatch: 8, identity: 0.75

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
atacgtgatttagaaatagaaaatgaaaaatt	Protospacer
 * . *  ******* ******* ********

31. spacer 1.4|237001|32|CP029010|CRT matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
ttttcttctttagaattcggaaacgtcattta	Protospacer
***************** *.*** *  *  *

32. spacer 1.4|237001|32|CP029010|CRT matches to AP014124 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C41-MedDCM-OCT-S34-C48, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
attgcagagttagaattagaaaataaaaaatt	Protospacer
 ** *    ************** .*******

33. spacer 1.4|237001|32|CP029010|CRT matches to MN270263 (Streptococcus phage phi-SsuFJSM5_rum, complete genome) position: , mismatch: 8, identity: 0.75

ttttcttctttagaattagaaaaagaa---aaatt	CRISPR spacer
tcacctcctttagaataagaaaaagaactcaa---	Protospacer
*. .**.********* **********   **

34. spacer 1.4|237001|32|CP029010|CRT matches to MN270264 (Streptococcus phage phi-SsuFJSM7_rum, complete genome) position: , mismatch: 8, identity: 0.75

ttttcttctttagaattagaaaaagaa---aaatt	CRISPR spacer
tcacctcctttagaataagaaaaagaactcaa---	Protospacer
*. .**.********* **********   **

35. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 8, identity: 0.724

tattttaattattttaatttagggatttt	CRISPR spacer
ttattaaattattttaatttagggtcaag	Protospacer
*  ** ****************** .

36. spacer 1.5|237058|29|CP029010|CRT matches to NC_018688 (Bacillus thuringiensis MC28 plasmid pMC319, complete sequence) position: , mismatch: 8, identity: 0.724

tattttaattattttaatttagggatttt	CRISPR spacer
tattttaatttttttaatttatactccgt	Protospacer
********** ********** .  .. *

37. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP009639 (Bacillus cereus 03BB108 plasmid pBFI_1, complete sequence) position: , mismatch: 8, identity: 0.724

tattttaattattttaatttagggatttt	CRISPR spacer
cggggtaatttttttaatttaggcattta	Protospacer
..   ***** ************ ****

38. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP015630 (Borrelia turicatae strain BTE5EL plasmid lp159) position: , mismatch: 8, identity: 0.724

tattttaattattttaatttagggatttt	CRISPR spacer
tattttaatcattttaatttataaggtaa	Protospacer
*********.*********** ... *

39. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 8, identity: 0.724

tattttaattattttaatttagggatttt	CRISPR spacer
ttattaaattattttaatttagggtcaag	Protospacer
*  ** ****************** .

40. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP053963 (Bacillus cereus strain FDAARGOS_802 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.724

tattttaattattttaatttagggatttt	CRISPR spacer
cggggtaatttttttaatttaggcattta	Protospacer
..   ***** ************ ****

41. spacer 1.8|237230|29|CP029010|CRT matches to MK568540 (Vibrio phage ValB1 HC, complete genome) position: , mismatch: 8, identity: 0.724

accgatgacttcaagtcaaagattcaaaa	CRISPR spacer
tttgatgacttcaaggcaaaaattcatgc	Protospacer
 ..************ ****.***** .

42. spacer 1.8|237230|29|CP029010|CRT matches to KP671755 (Vibrio phage ValKK3, complete genome) position: , mismatch: 8, identity: 0.724

accgatgacttcaagtcaaagattcaaaa	CRISPR spacer
tttgatgacttcaaggcaaaaattcatgc	Protospacer
 ..************ ****.***** .

43. spacer 1.8|237230|29|CP029010|CRT matches to MT612989 (Vibrio phage vB_ValM_R11Z, complete genome) position: , mismatch: 8, identity: 0.724

accgatgacttcaagtcaaagattcaaaa	CRISPR spacer
tttgatgacttcaaggcaaaaattcatgc	Protospacer
 ..************ ****.***** .

44. spacer 1.8|237230|29|CP029010|CRT matches to MT612988 (Vibrio phage vB_ValM_R10Z, complete genome) position: , mismatch: 8, identity: 0.724

accgatgacttcaagtcaaagattcaaaa	CRISPR spacer
tttgatgacttcaaggcaaaaattcatgc	Protospacer
 ..************ ****.***** .

45. spacer 1.8|237230|29|CP029010|CRT matches to KT919973 (Vibrio phage phi-ST2, complete genome) position: , mismatch: 8, identity: 0.724

accgatgacttcaagtcaaagattcaaaa	CRISPR spacer
tttgatgacttcaaggcaaaaattcatgc	Protospacer
 ..************ ****.***** .

46. spacer 1.8|237230|29|CP029010|CRT matches to NC_023568 (Vibrio phage VH7D, complete genome) position: , mismatch: 8, identity: 0.724

accgatgacttcaagtcaaagattcaaaa	CRISPR spacer
tttgatgacttcaaggcaaaaattcatgc	Protospacer
 ..************ ****.***** .

47. spacer 1.8|237230|29|CP029010|CRT matches to KT919972 (Vibrio phage phi-Grn1, complete genome) position: , mismatch: 8, identity: 0.724

accgatgacttcaagtcaaagattcaaaa	CRISPR spacer
tttgatgacttcaaggcaaaaattcatgc	Protospacer
 ..************ ****.***** .

48. spacer 1.4|237001|32|CP029010|CRT matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
gtttcttctttagaatcagaaaaacctgttgt	Protospacer
 ***************.*******   .   *

49. spacer 1.4|237001|32|CP029010|CRT matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
gtttcttctttagaatcagaaaaacctgttgt	Protospacer
 ***************.*******   .   *

50. spacer 1.4|237001|32|CP029010|CRT matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
gtttcttctttagaatcagaaaaacctgttgt	Protospacer
 ***************.*******   .   *

51. spacer 1.4|237001|32|CP029010|CRT matches to NC_013509 (Edwardsiella tarda EIB202 plasmid pEIB202, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
gtttcttctttagaatcagaaaaacctgttgt	Protospacer
 ***************.*******   .   *

52. spacer 1.4|237001|32|CP029010|CRT matches to NZ_KX258624 (Bacillus thuringiensis strain INTA Fr7-4 plasmid pFR260, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
ccattttcttttgaactagaaaaagaaaatga	Protospacer
.. *.****** ***.*************

53. spacer 1.4|237001|32|CP029010|CRT matches to NZ_CP014284 (Bacillus thuringiensis strain Bt185 plasmid pBT1850294, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
ccattttcttttgaactagaaaaagaaaatga	Protospacer
.. *.****** ***.*************

54. spacer 1.4|237001|32|CP029010|CRT matches to NZ_CP010578 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
ccattttcttttgaactagaaaaagaaaatga	Protospacer
.. *.****** ***.*************

55. spacer 1.4|237001|32|CP029010|CRT matches to NZ_CP010579 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB92, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
ccattttcttttgaactagaaaaagaaaatga	Protospacer
.. *.****** ***.*************

56. spacer 1.4|237001|32|CP029010|CRT matches to NZ_CP015177 (Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
ccattttcttttgaactagaaaaagaaaatga	Protospacer
.. *.****** ***.*************

57. spacer 1.4|237001|32|CP029010|CRT matches to NZ_CP026554 (Citrobacter sp. SL156 plasmid unnamed5) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
aagcgttctttagaattggaaaaaggaaatta	Protospacer
   . ************.*******.*** *

58. spacer 1.4|237001|32|CP029010|CRT matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
ggtcgttctttagaattagaacaacaaaatga	Protospacer
  *. **************** ** ****

59. spacer 1.4|237001|32|CP029010|CRT matches to NZ_CP013682 (Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
ggtcgttctttagaattagaacaacaaaatga	Protospacer
  *. **************** ** ****

60. spacer 1.4|237001|32|CP029010|CRT matches to NZ_CP032609 (Bacillus thuringiensis strain QZL38 plasmid p.2, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
ccattttcttttgaactagaaaaagaaaatga	Protospacer
.. *.****** ***.*************

61. spacer 1.4|237001|32|CP029010|CRT matches to CP052530 (Klebsiella pneumoniae strain B16KP0177 plasmid pB16KP0177-6, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
aaacgttctttagaattggaaaaaggaaatta	Protospacer
   . ************.*******.*** *

62. spacer 1.4|237001|32|CP029010|CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
ccattttcttttgaactagaaaaagaaaatga	Protospacer
.. *.****** ***.*************

63. spacer 1.4|237001|32|CP029010|CRT matches to NZ_CP013295 (Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
ggtcgttctttagaattagaacaacaaaatga	Protospacer
  *. **************** ** ****

64. spacer 1.4|237001|32|CP029010|CRT matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
ggtcgttctttagaattagaacaacaaaatga	Protospacer
  *. **************** ** ****

65. spacer 1.4|237001|32|CP029010|CRT matches to KT337346 (Streptococcus phage phiARI0285-2, partial genome) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
aggcattcttgagaattggaaaaagaaaggtt	Protospacer
   . ***** ******.**********..**

66. spacer 1.4|237001|32|CP029010|CRT matches to MN693779 (Marine virus AFVG_250M346, complete genome) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
gagtatggtttagaattagaaattgaaaaata	Protospacer
   * *  **************  *******

67. spacer 1.4|237001|32|CP029010|CRT matches to FR671409 (Streptococcus phage 11865) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
aggcattcttgagaattggaaaaagaaaggtt	Protospacer
   . ***** ******.**********..**

68. spacer 1.4|237001|32|CP029010|CRT matches to KY065503 (Streptococcus phage IPP67, complete genome) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
aggcattcttgagaattggaaaaagaaaggtt	Protospacer
   . ***** ******.**********..**

69. spacer 1.4|237001|32|CP029010|CRT matches to KT337372 (Streptococcus phage phiARI0995b, partial genome) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
aggcattcttgagaattggaaaaagaaaggtt	Protospacer
   . ***** ******.**********..**

70. spacer 1.4|237001|32|CP029010|CRT matches to KY065481 (Streptococcus phage IPP41, complete genome) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
aggcattcttgagaattggaaaaagaaaggtt	Protospacer
   . ***** ******.**********..**

71. spacer 1.4|237001|32|CP029010|CRT matches to KY065453 (Streptococcus phage IPP11, complete genome) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
aggcattcttgagaattggaaaaagaaaggtt	Protospacer
   . ***** ******.**********..**

72. spacer 1.4|237001|32|CP029010|CRT matches to KY065504 (Streptococcus phage IPP68, complete genome) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
aggcattcttgagaattggaaaaagaaaggtt	Protospacer
   . ***** ******.**********..**

73. spacer 1.4|237001|32|CP029010|CRT matches to KT337342 (Streptococcus phage phiARI0131-2, complete genome) position: , mismatch: 9, identity: 0.719

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
aggcattcttgagaattggaaaaagaaaggtt	Protospacer
   . ***** ******.**********..**

74. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 9, identity: 0.69

tattttaattattttaatttagggatttt	CRISPR spacer
gattttaattattttaagttagatgcaca	Protospacer
 **************** ****. .. .

75. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP010112 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence) position: , mismatch: 9, identity: 0.69

tattttaattattttaatttagggatttt	CRISPR spacer
gattttaattattttaagttagatgcaca	Protospacer
 **************** ****. .. .

76. spacer 1.5|237058|29|CP029010|CRT matches to CP024686 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence) position: , mismatch: 9, identity: 0.69

tattttaattattttaatttagggatttt	CRISPR spacer
gattttaattattttaagttagatgcaca	Protospacer
 **************** ****. .. .

77. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP015730 (Bacillus cereus strain A1 plasmid pBCA1, complete sequence) position: , mismatch: 9, identity: 0.69

tattttaattattttaatttagggatttt	CRISPR spacer
gattttaattattttaagttagatgcaca	Protospacer
 **************** ****. .. .

78. spacer 1.5|237058|29|CP029010|CRT matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.69

tattttaattattttaatttagggatttt	CRISPR spacer
gattttaattattttaagttagatgcaca	Protospacer
 **************** ****. .. .

79. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP016590 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-02, complete sequence) position: , mismatch: 9, identity: 0.69

tattttaattattttaatttagggatttt	CRISPR spacer
gattttaattattttaagttagatgcaca	Protospacer
 **************** ****. .. .

80. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 9, identity: 0.69

tattttaattattttaatttagggatttt	CRISPR spacer
gattttaattattttaagttagatgcaca	Protospacer
 **************** ****. .. .

81. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP016596 (Bacillus cereus strain K8 plasmid pBCM301, complete sequence) position: , mismatch: 9, identity: 0.69

tattttaattattttaatttagggatttt	CRISPR spacer
gattttaattattttaagttagatgcaca	Protospacer
 **************** ****. .. .

82. spacer 1.5|237058|29|CP029010|CRT matches to NC_010180 (Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence) position: , mismatch: 9, identity: 0.69

tattttaattattttaatttagggatttt	CRISPR spacer
gattttaattattttaagttagatgcaca	Protospacer
 **************** ****. .. .

83. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP013276 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-1-360K, complete sequence) position: , mismatch: 9, identity: 0.69

tattttaattattttaatttagggatttt	CRISPR spacer
gattttaattattttaagttagatgcaca	Protospacer
 **************** ****. .. .

84. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP043831 (Bacillus sp. BS98 plasmid unnamed1) position: , mismatch: 9, identity: 0.69

tattttaattattttaatttagggatttt	CRISPR spacer
gattttaattattttaagttagatgcaca	Protospacer
 **************** ****. .. .

85. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP039722 (Bacillus thuringiensis strain BT-59 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.69

tattttaattattttaatttagggatttt	CRISPR spacer
gattttaattattttaagttagatgcaca	Protospacer
 **************** ****. .. .

86. spacer 1.5|237058|29|CP029010|CRT matches to NC_018689 (Bacillus thuringiensis MC28 plasmid pMC429, complete sequence) position: , mismatch: 9, identity: 0.69

tattttaattattttaatttagggatttt	CRISPR spacer
gattttaattattttaagttagatgcaca	Protospacer
 **************** ****. .. .

87. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP045608 (Bacillus cereus strain SB1 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.69

tattttaattattttaatttagggatttt	CRISPR spacer
gattttaattattttaagttagatgcaca	Protospacer
 **************** ****. .. .

88. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP009349 (Bacillus thuringiensis HD1002 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.69

tattttaattattttaatttagggatttt	CRISPR spacer
gattttaattattttaagttagatgcaca	Protospacer
 **************** ****. .. .

89. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP045023 (Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.69

tattttaattattttaatttagggatttt	CRISPR spacer
gattttaattattttaagttagatgcaca	Protospacer
 **************** ****. .. .

90. spacer 1.5|237058|29|CP029010|CRT matches to NZ_CP018741 (Bacillus cereus strain FORC_047 plasmid pFORC47_1, complete sequence) position: , mismatch: 9, identity: 0.69

tattttaattattttaatttagggatttt	CRISPR spacer
gattttaattattttaagttagatgcaca	Protospacer
 **************** ****. .. .

91. spacer 1.4|237001|32|CP029010|CRT matches to AP022647 (Bacillus wiedmannii PL1 plasmid pBwiPL1-4 DNA, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
atttcctccttagaattagaaaaagccgcccg	Protospacer
 ****.**.****************  .  .

92. spacer 1.4|237001|32|CP029010|CRT matches to NC_013317 (Enterococcus faecium plasmid p5753cA, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
aaggtatatttaaaattagaaaaacaaaaata	Protospacer
    . * ****.*********** ******

93. spacer 1.4|237001|32|CP029010|CRT matches to NZ_LR214994 (Mycoplasma hyopneumoniae strain NCTC10127 plasmid 3) position: , mismatch: 10, identity: 0.688

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
ctaaaaactttagaattagaagaaaaaaaaga	Protospacer
.*     **************.**.*****

94. spacer 1.4|237001|32|CP029010|CRT matches to LR588166 (Pseudomonas phage vB_PaeM_MIJ3) position: , mismatch: 10, identity: 0.688

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
ggagtttctttaaaattagaaaacgaaagtat	Protospacer
    .*******.********** ****.  *

95. spacer 1.4|237001|32|CP029010|CRT matches to MH121069 (Pseudomonas phage vB_PaeM_PA5oct, complete genome) position: , mismatch: 10, identity: 0.688

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
ggagtttctttaaaattagaaaacgaaagtat	Protospacer
    .*******.********** ****.  *

96. spacer 1.4|237001|32|CP029010|CRT matches to MN694146 (Marine virus AFVG_250M723, complete genome) position: , mismatch: 10, identity: 0.688

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
atagaagggttagaattaaagaaagaaaaatt	Protospacer
 *       *********.*.***********

97. spacer 1.4|237001|32|CP029010|CRT matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 10, identity: 0.688

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
aatgtttctttagaatcagaaaatgaaattaa	Protospacer
  * .***********.****** ****

98. spacer 1.4|237001|32|CP029010|CRT matches to MN698239 (Pelagibacter phage HTVC023P, complete genome) position: , mismatch: 11, identity: 0.656

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
gcaaaagctttagatttagtaaaagaaaaacc	Protospacer
 .     ******* **** **********..

99. spacer 1.4|237001|32|CP029010|CRT matches to AP014256 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S25-C192, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 11, identity: 0.656

ttttcttctttagaattagaaaaagaaaaatt	CRISPR spacer
caaagacaattacaaatagaaaaagaaaaatt	Protospacer
.     .  *** ** ****************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage