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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP029693 Pseudomonas putida strain JBC17 chromosome, complete genome 2 crisprs DEDDh,csa3,DinG,WYL,cas3,PD-DExK,RT 0 0 9 0

Results visualization

1. CP029693
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029693_1 633143-633237 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029693_3 6496114-6496218 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 804816 : 839321 27 Salmonella_phage(25.0%) integrase,transposase attL 804200:804212|attR 807036:807048
DBSCAN-SWA_2 1252185 : 1310644 75 Pseudomonas_phage(30.23%) integrase,tail,plate,terminase,lysis,capsid,protease,portal,holin,head attL 1272048:1272106|attR 1310737:1310795
DBSCAN-SWA_3 1872055 : 1881100 13 uncultured_Caudovirales_phage(71.43%) tRNA NA
DBSCAN-SWA_4 3767963 : 3821272 48 Tupanvirus(20.0%) protease,holin NA
DBSCAN-SWA_5 5446526 : 5535843 86 uncultured_Caudovirales_phage(20.59%) tail,tRNA,plate,lysis,protease,holin NA
DBSCAN-SWA_6 5717226 : 5728309 9 Enterobacteria_phage(28.57%) NA NA
DBSCAN-SWA_7 6189628 : 6205022 18 Pseudomonas_virus(62.5%) integrase,tRNA,tail attL 6179490:6179506|attR 6209027:6209043
DBSCAN-SWA_8 6208073 : 6264184 60 Pseudomonas_virus(39.13%) integrase,tail,tRNA,plate,terminase,lysis,capsid,portal,holin,head attL 6216387:6216403|attR 6241640:6241656
DBSCAN-SWA_9 6279359 : 6361962 98 Pseudomonas_phage(52.0%) integrase,tail,tRNA,lysis,terminase,head,capsid,protease,portal,holin attL 6299675:6299711|attR 6363195:6363231
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage