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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP029970 Lactobacillus curvatus strain ZJUNIT8 plasmid pnunamed4, complete sequence 0 crisprs NA 0 0 0 0
CP029966 Lactobacillus curvatus strain ZJUNIT8 chromosome, complete genome 1 crisprs cas3,DEDDh,DinG,csa3 0 1 10 0
CP029968 Lactobacillus curvatus strain ZJUNIT8 plasmid pnunamed2, complete sequence 0 crisprs NA 0 0 0 0
CP029969 Lactobacillus curvatus strain ZJUNIT8 plasmid pnunamed3, complete sequence 0 crisprs NA 0 0 0 0
CP029967 Lactobacillus curvatus strain ZJUNIT8 plasmid pnunamed1, complete sequence 0 crisprs csa3 0 0 0 0

Results visualization

1. CP029966
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029966_1 859670-859764 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP029966_1 1.1|859699|37|CP029966|CRISPRCasFinder 859699-859735 37 MN855837 Bacteriophage sp. isolate 206, complete genome 4506-4542 6 0.838

1. spacer 1.1|859699|37|CP029966|CRISPRCasFinder matches to MN855837 (Bacteriophage sp. isolate 206, complete genome) position: , mismatch: 6, identity: 0.838

gttcaaccggtattgtggctgaccaaatggctcaacg	CRISPR spacer
atgttgacggtattgtggctgaccaaatggctcaacg	Protospacer
.* . . ******************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 38144 : 92852 55 Bacillus_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_2 335873 : 384535 39 Lactobacillus_phage(20.0%) transposase,tRNA,protease NA
DBSCAN-SWA_3 468912 : 478783 11 Enterobacteria_phage(37.5%) NA NA
DBSCAN-SWA_4 501516 : 608471 98 Lactobacillus_phage(45.28%) integrase,head,tail,tRNA,capsid,portal,protease,holin,lysis,terminase attL 521313:521328|attR 549698:549713
DBSCAN-SWA_5 714149 : 722383 9 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_6 812066 : 820093 7 Acanthocystis_turfacea_Chlorella_virus(33.33%) NA NA
DBSCAN-SWA_7 1052359 : 1059999 7 Staphylococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_8 1254872 : 1327806 94 Lactococcus_phage(20.0%) tail,tRNA,capsid,transposase,protease,holin,terminase NA
DBSCAN-SWA_9 1364882 : 1415528 44 Streptococcus_phage(21.43%) bacteriocin,integrase,transposase,protease attL 1413422:1413441|attR 1423227:1423246
DBSCAN-SWA_10 1757275 : 1800913 40 Staphylococcus_prophage(27.27%) transposase,head NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage